date generated: 2020-08-25

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                  de0        de3        de6       de12       de24
## AT2G47450 -10.856535 -4.8125589 -1.4343223 -0.8172142 -2.4956564
## AT2G22510  -9.501362 -1.6195266 -2.2977416 -0.2952217 -0.3786898
## AT1G65970   8.549705 -3.4754273  0.8418776 -1.4746526 -0.7178258
## AT3G11510   8.413675  2.3250312  5.9540292  0.9313677 -0.4879516
## AT2G32870  -8.261510  0.3586421 -0.3735695  1.9089450 -1.7707577
## AT5G64100   8.215921  2.5312055  2.3771498  0.2114110  1.4792765

Here are some metrics about the input data profile:

Profile metrics
Profile metrics
num_genes_in_profile 20269
duplicated_genes_present 0
num_profile_genes_in_sets 9016
num_profile_genes_not_in_sets 11253

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: Ath_AGI_LOCUS_TAIR10_Aug2012.txt.gmt

Gene sets metrics
Gene sets metrics
num_genesets 959
num_genesets_excluded 860
num_genesets_included 99

Genes by sector
de0 de3 de6 de12 de24 Count
1 -1 -1 -1 -1 -1 2863
2 1 -1 -1 -1 -1 732
3 -1 1 -1 -1 -1 436
4 1 1 -1 -1 -1 190
5 -1 -1 1 -1 -1 410
6 1 -1 1 -1 -1 552
7 -1 1 1 -1 -1 324
8 1 1 1 -1 -1 865
9 1 1 1 0 -1 1
10 -1 -1 -1 1 -1 963
11 1 -1 -1 1 -1 196
12 -1 0 -1 1 -1 1
13 -1 1 -1 1 -1 668
14 1 1 -1 1 -1 286
15 1 1 0 1 -1 1
16 -1 -1 1 1 -1 265
17 1 -1 1 1 -1 284
18 -1 1 1 1 -1 665
19 0 1 1 1 -1 1
20 1 1 1 1 -1 1457
21 -1 1 1 1 0 1
22 -1 -1 -1 -1 1 1100
23 1 -1 -1 -1 1 822
24 -1 1 -1 -1 1 380
25 1 1 -1 -1 1 275
26 -1 -1 1 -1 1 173
27 1 -1 1 -1 1 377
28 -1 1 1 -1 1 243
29 1 1 1 -1 1 954
30 -1 -1 -1 1 1 354
31 1 -1 -1 1 1 174
32 -1 1 -1 1 1 511
33 1 1 -1 1 1 316
34 -1 -1 1 1 1 184
35 1 -1 1 1 1 213
36 -1 1 1 1 1 679
37 1 1 1 1 1 2353
Number of significant gene sets (FDR<0.05)= 46

Gene sets by sector


Gene sets by sector
s.de0 s.de3 s.de6 s.de12 s.de24 Count
1 -1 -1 -1 -1 -1 10
2 1 -1 -1 -1 -1 2
3 -1 1 -1 -1 -1 2
4 1 -1 1 -1 -1 2
5 -1 1 1 -1 -1 1
6 1 1 1 -1 -1 1
7 -1 -1 -1 1 -1 2
8 1 1 -1 1 -1 1
9 -1 -1 1 1 -1 1
10 1 -1 1 1 -1 1
11 1 1 1 1 -1 2
12 1 1 -1 -1 1 1
13 -1 -1 1 -1 1 1
14 -1 1 1 -1 1 1
15 -1 -1 -1 1 1 2
16 -1 1 -1 1 1 2
17 1 -1 1 1 1 1
18 -1 1 1 1 1 5
19 1 1 1 1 1 8

Interactive enrichment scatterplot

All sets with FDR<0.05. Try hovering over the points.

Top N sets irrespective of FDR. Try hovering over the points.

A heatmap of S values for top results


A plot of effect size versus significance


Significance is the -log2(p.adjustMANOVA) and effect size is the s.dist which is the hypotenuse of the s scores.

Results table

Top N= 50 gene sets

set setSize pMANOVA p.adjustMANOVA s.dist s.de0 s.de3 s.de6 s.de12 s.de24 p.de0 p.de3 p.de6 p.de12 p.de24
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 18 1.19e-06 9.07e-06 1.120 -0.4740 -0.742000 -0.3800 -0.5040 -0.28500 5.04e-04 5.05e-08 5.24e-03 2.16e-04 3.62e-02
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 11 1.55e-03 5.11e-03 1.100 -0.7010 -0.398000 -0.6340 -0.3150 -0.22200 5.73e-05 2.22e-02 2.69e-04 7.01e-02 2.02e-01
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 35 1.91e-13 3.79e-12 1.090 -0.4390 -0.730000 -0.3690 -0.3550 -0.45500 6.97e-06 7.28e-14 1.59e-04 2.76e-04 3.11e-06
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE 14 1.38e-03 4.72e-03 0.941 0.0992 0.605000 0.4780 0.4770 0.23300 5.21e-01 8.75e-05 1.97e-03 2.02e-03 1.31e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE 11 1.01e-02 2.43e-02 0.939 0.4260 0.314000 0.5980 0.3950 0.29700 1.45e-02 7.09e-02 5.90e-04 2.32e-02 8.84e-02
TRANSPORT AMINO ACIDS 13 1.38e-03 4.72e-03 0.914 0.0523 0.609000 0.2890 0.5630 0.24900 7.44e-01 1.43e-04 7.14e-02 4.43e-04 1.20e-01
TRANSPORT SUGARS 22 1.65e-04 7.79e-04 0.882 0.1840 0.562000 0.3820 0.4950 0.19200 1.35e-01 5.04e-06 1.93e-03 5.73e-05 1.18e-01
RNA PROCESSING SPLICING 19 3.96e-03 1.12e-02 0.785 -0.2670 -0.425000 -0.2590 -0.3790 -0.39200 4.36e-02 1.34e-03 5.08e-02 4.25e-03 3.07e-03
RNA TRANSCRIPTION 15 3.08e-02 5.98e-02 0.739 -0.2300 -0.388000 -0.4200 -0.2000 -0.35700 1.23e-01 9.36e-03 4.90e-03 1.81e-01 1.65e-02
PROTEIN DEGRADATION AAA TYPE 24 4.52e-06 3.19e-05 0.728 0.0790 -0.468000 -0.4640 -0.2760 -0.11600 5.03e-01 7.32e-05 8.42e-05 1.93e-02 3.25e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI 11 2.75e-03 8.51e-03 0.721 -0.3260 0.363000 0.0274 0.4970 0.18700 6.10e-02 3.73e-02 8.75e-01 4.31e-03 2.84e-01
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN 84 4.09e-24 1.35e-22 0.711 -0.1690 0.241000 0.1740 0.5660 0.26000 7.44e-03 1.32e-04 5.76e-03 2.68e-19 3.83e-05
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 34 2.88e-13 4.75e-12 0.709 -0.6060 0.099700 -0.2260 0.0651 0.26300 9.27e-10 3.14e-01 2.25e-02 5.11e-01 7.89e-03
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 10 3.58e-02 6.68e-02 0.704 0.4420 0.343000 0.3660 0.0619 -0.21200 1.56e-02 6.02e-02 4.53e-02 7.35e-01 2.45e-01
PROTEIN DEGRADATION CYSTEINE PROTEASE 12 2.44e-02 5.14e-02 0.697 -0.1640 -0.344000 -0.5550 -0.1290 -0.12100 3.25e-01 3.89e-02 8.64e-04 4.40e-01 4.68e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I 14 3.68e-04 1.46e-03 0.668 -0.2160 0.082600 0.0949 0.6090 0.11200 1.61e-01 5.93e-01 5.39e-01 7.96e-05 4.70e-01
PROTEIN SYNTHESIS ELONGATION 15 1.16e-03 4.27e-03 0.667 0.5440 0.100000 0.3160 -0.0643 -0.18600 2.61e-04 5.03e-01 3.41e-02 6.67e-01 2.13e-01
CELL CYCLE 15 7.06e-02 1.08e-01 0.662 -0.3010 -0.447000 -0.2820 -0.1820 -0.19000 4.38e-02 2.75e-03 5.85e-02 2.21e-01 2.02e-01
CELL DIVISION 27 3.56e-03 1.04e-02 0.658 -0.3570 -0.362000 -0.2300 -0.2120 -0.27800 1.31e-03 1.15e-03 3.87e-02 5.68e-02 1.24e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2 10 3.22e-02 6.12e-02 0.656 -0.2320 -0.336000 -0.2580 0.1640 -0.41200 2.04e-01 6.59e-02 1.57e-01 3.69e-01 2.39e-02
TRANSPORT MISC 32 5.06e-03 1.35e-02 0.612 0.2270 0.338000 0.2220 0.2790 0.28600 2.63e-02 9.42e-04 2.95e-02 6.37e-03 5.05e-03
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN 12 5.01e-05 2.76e-04 0.599 -0.1890 0.416000 0.2930 -0.2480 -0.05150 2.57e-01 1.27e-02 7.88e-02 1.37e-01 7.57e-01
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY 10 1.89e-01 2.49e-01 0.586 -0.2540 -0.450000 -0.2190 -0.1680 -0.00479 1.64e-01 1.37e-02 2.31e-01 3.57e-01 9.79e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 31 4.53e-08 4.48e-07 0.582 -0.3200 0.239000 0.2710 0.2970 0.13000 2.03e-03 2.14e-02 9.02e-03 4.17e-03 2.09e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES 13 6.60e-03 1.72e-02 0.579 0.2190 -0.075100 0.1470 -0.1470 -0.48800 1.72e-01 6.39e-01 3.59e-01 3.58e-01 2.30e-03
STRESS ABIOTIC HEAT 76 5.96e-07 4.92e-06 0.564 -0.1500 -0.342000 -0.2070 -0.3590 -0.08140 2.40e-02 2.47e-07 1.78e-03 6.40e-08 2.20e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE 21 2.64e-02 5.45e-02 0.555 0.1490 0.396000 0.3280 0.0858 0.11700 2.38e-01 1.66e-03 9.23e-03 4.96e-01 3.52e-01
PROTEIN DEGRADATION UBIQUITIN 22 5.72e-02 9.60e-02 0.551 -0.2000 -0.322000 -0.2870 -0.0879 -0.26400 1.04e-01 8.85e-03 1.99e-02 4.76e-01 3.22e-02
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 10 5.58e-02 9.52e-02 0.547 -0.2910 -0.002330 -0.0699 0.4260 -0.16700 1.11e-01 9.90e-01 7.02e-01 1.97e-02 3.60e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII 10 4.67e-02 8.40e-02 0.540 -0.2490 -0.182000 -0.3190 0.2800 0.12700 1.73e-01 3.19e-01 8.05e-02 1.26e-01 4.88e-01
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE 15 1.05e-02 2.48e-02 0.536 0.2480 0.059000 0.2210 0.0567 -0.41200 9.64e-02 6.93e-01 1.38e-01 7.04e-01 5.74e-03
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE 16 3.09e-03 9.28e-03 0.532 -0.1410 -0.034400 -0.2300 0.3280 -0.31900 3.29e-01 8.12e-01 1.12e-01 2.30e-02 2.70e-02
STRESS BIOTIC PR-PROTEINS 105 9.71e-23 2.40e-21 0.530 -0.2520 -0.158000 -0.2700 0.3390 -0.07170 7.99e-06 5.14e-03 1.74e-06 2.02e-09 2.05e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES 53 5.63e-05 2.93e-04 0.529 0.1510 0.336000 0.3280 0.0771 0.17700 5.71e-02 2.33e-05 3.63e-05 3.32e-01 2.61e-02
RNA RNA BINDING 89 2.65e-11 3.28e-10 0.529 -0.2170 -0.212000 -0.0352 -0.2230 -0.37100 4.05e-04 5.51e-04 5.66e-01 2.83e-04 1.45e-09
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 206 4.17e-47 4.13e-45 0.528 0.1240 -0.010800 0.1660 0.3640 -0.32100 2.22e-03 7.89e-01 3.94e-05 2.08e-19 1.87e-15
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY 16 5.86e-02 9.67e-02 0.521 -0.3750 -0.137000 -0.2870 -0.0970 0.14300 9.46e-03 3.43e-01 4.67e-02 5.02e-01 3.21e-01
SIGNALLING RECEPTOR KINASES MISC 37 1.71e-05 1.13e-04 0.511 -0.1660 0.162000 0.1360 0.3900 0.19000 8.07e-02 8.87e-02 1.51e-01 3.95e-05 4.52e-02
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY 16 3.60e-04 1.46e-03 0.491 -0.1580 -0.362000 0.1540 0.0228 -0.24600 2.73e-01 1.21e-02 2.87e-01 8.75e-01 8.80e-02
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR) 11 1.91e-01 2.49e-01 0.491 0.0899 -0.207000 -0.0797 -0.2350 -0.35900 6.06e-01 2.35e-01 6.47e-01 1.78e-01 3.94e-02
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 11 1.83e-01 2.45e-01 0.482 0.4080 0.032300 0.2180 -0.1330 0.00308 1.92e-02 8.53e-01 2.11e-01 4.46e-01 9.86e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 12 2.72e-01 3.33e-01 0.482 0.3990 0.195000 0.1650 0.0312 0.08040 1.66e-02 2.43e-01 3.22e-01 8.52e-01 6.30e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE 59 7.16e-04 2.73e-03 0.480 -0.2280 -0.222000 -0.2360 -0.0565 -0.26600 2.43e-03 3.20e-03 1.73e-03 4.53e-01 4.17e-04
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION 14 1.51e-01 2.11e-01 0.479 0.0849 -0.254000 -0.1070 -0.2670 -0.27300 5.82e-01 9.97e-02 4.87e-01 8.39e-02 7.68e-02
MISC MISC2 18 1.78e-02 3.91e-02 0.476 0.2080 0.025400 -0.0535 -0.2040 0.37200 1.27e-01 8.52e-01 6.94e-01 1.33e-01 6.32e-03
MISC GDSL-MOTIF LIPASE 43 9.37e-08 8.43e-07 0.468 -0.1700 0.353000 -0.0775 0.1990 0.14500 5.43e-02 6.30e-05 3.79e-01 2.43e-02 1.01e-01
REDOX GLUTAREDOXINS 16 9.84e-03 2.43e-02 0.452 0.0991 -0.112000 0.2140 0.1190 0.35000 4.93e-01 4.37e-01 1.38e-01 4.12e-01 1.54e-02
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR 75 2.38e-05 1.47e-04 0.451 -0.0703 -0.303000 -0.1440 -0.1670 -0.24200 2.93e-01 5.73e-06 3.16e-02 1.26e-02 2.92e-04
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX 178 5.55e-12 7.85e-11 0.437 0.1670 0.173000 0.1700 0.3190 0.04860 1.19e-04 6.65e-05 9.49e-05 2.19e-13 2.64e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 19 7.90e-02 1.17e-01 0.433 0.2280 -0.000811 0.2220 -0.0148 0.29300 8.54e-02 9.95e-01 9.41e-02 9.11e-01 2.70e-02


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pMANOVA p.adjustMANOVA s.dist s.de0 s.de3 s.de6 s.de12 s.de24 p.de0 p.de3 p.de6 p.de12 p.de24
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 18 1.19e-06 9.07e-06 1.1200 -0.474000 -0.742000 -0.380000 -0.50400 -0.28500 5.04e-04 5.05e-08 5.24e-03 2.16e-04 3.62e-02
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 11 1.55e-03 5.11e-03 1.1000 -0.701000 -0.398000 -0.634000 -0.31500 -0.22200 5.73e-05 2.22e-02 2.69e-04 7.01e-02 2.02e-01
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 35 1.91e-13 3.79e-12 1.0900 -0.439000 -0.730000 -0.369000 -0.35500 -0.45500 6.97e-06 7.28e-14 1.59e-04 2.76e-04 3.11e-06
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE 14 1.38e-03 4.72e-03 0.9410 0.099200 0.605000 0.478000 0.47700 0.23300 5.21e-01 8.75e-05 1.97e-03 2.02e-03 1.31e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE 11 1.01e-02 2.43e-02 0.9390 0.426000 0.314000 0.598000 0.39500 0.29700 1.45e-02 7.09e-02 5.90e-04 2.32e-02 8.84e-02
TRANSPORT AMINO ACIDS 13 1.38e-03 4.72e-03 0.9140 0.052300 0.609000 0.289000 0.56300 0.24900 7.44e-01 1.43e-04 7.14e-02 4.43e-04 1.20e-01
TRANSPORT SUGARS 22 1.65e-04 7.79e-04 0.8820 0.184000 0.562000 0.382000 0.49500 0.19200 1.35e-01 5.04e-06 1.93e-03 5.73e-05 1.18e-01
RNA PROCESSING SPLICING 19 3.96e-03 1.12e-02 0.7850 -0.267000 -0.425000 -0.259000 -0.37900 -0.39200 4.36e-02 1.34e-03 5.08e-02 4.25e-03 3.07e-03
RNA TRANSCRIPTION 15 3.08e-02 5.98e-02 0.7390 -0.230000 -0.388000 -0.420000 -0.20000 -0.35700 1.23e-01 9.36e-03 4.90e-03 1.81e-01 1.65e-02
PROTEIN DEGRADATION AAA TYPE 24 4.52e-06 3.19e-05 0.7280 0.079000 -0.468000 -0.464000 -0.27600 -0.11600 5.03e-01 7.32e-05 8.42e-05 1.93e-02 3.25e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI 11 2.75e-03 8.51e-03 0.7210 -0.326000 0.363000 0.027400 0.49700 0.18700 6.10e-02 3.73e-02 8.75e-01 4.31e-03 2.84e-01
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN 84 4.09e-24 1.35e-22 0.7110 -0.169000 0.241000 0.174000 0.56600 0.26000 7.44e-03 1.32e-04 5.76e-03 2.68e-19 3.83e-05
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 34 2.88e-13 4.75e-12 0.7090 -0.606000 0.099700 -0.226000 0.06510 0.26300 9.27e-10 3.14e-01 2.25e-02 5.11e-01 7.89e-03
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 10 3.58e-02 6.68e-02 0.7040 0.442000 0.343000 0.366000 0.06190 -0.21200 1.56e-02 6.02e-02 4.53e-02 7.35e-01 2.45e-01
PROTEIN DEGRADATION CYSTEINE PROTEASE 12 2.44e-02 5.14e-02 0.6970 -0.164000 -0.344000 -0.555000 -0.12900 -0.12100 3.25e-01 3.89e-02 8.64e-04 4.40e-01 4.68e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I 14 3.68e-04 1.46e-03 0.6680 -0.216000 0.082600 0.094900 0.60900 0.11200 1.61e-01 5.93e-01 5.39e-01 7.96e-05 4.70e-01
PROTEIN SYNTHESIS ELONGATION 15 1.16e-03 4.27e-03 0.6670 0.544000 0.100000 0.316000 -0.06430 -0.18600 2.61e-04 5.03e-01 3.41e-02 6.67e-01 2.13e-01
CELL CYCLE 15 7.06e-02 1.08e-01 0.6620 -0.301000 -0.447000 -0.282000 -0.18200 -0.19000 4.38e-02 2.75e-03 5.85e-02 2.21e-01 2.02e-01
CELL DIVISION 27 3.56e-03 1.04e-02 0.6580 -0.357000 -0.362000 -0.230000 -0.21200 -0.27800 1.31e-03 1.15e-03 3.87e-02 5.68e-02 1.24e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2 10 3.22e-02 6.12e-02 0.6560 -0.232000 -0.336000 -0.258000 0.16400 -0.41200 2.04e-01 6.59e-02 1.57e-01 3.69e-01 2.39e-02
TRANSPORT MISC 32 5.06e-03 1.35e-02 0.6120 0.227000 0.338000 0.222000 0.27900 0.28600 2.63e-02 9.42e-04 2.95e-02 6.37e-03 5.05e-03
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN 12 5.01e-05 2.76e-04 0.5990 -0.189000 0.416000 0.293000 -0.24800 -0.05150 2.57e-01 1.27e-02 7.88e-02 1.37e-01 7.57e-01
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY 10 1.89e-01 2.49e-01 0.5860 -0.254000 -0.450000 -0.219000 -0.16800 -0.00479 1.64e-01 1.37e-02 2.31e-01 3.57e-01 9.79e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 31 4.53e-08 4.48e-07 0.5820 -0.320000 0.239000 0.271000 0.29700 0.13000 2.03e-03 2.14e-02 9.02e-03 4.17e-03 2.09e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES 13 6.60e-03 1.72e-02 0.5790 0.219000 -0.075100 0.147000 -0.14700 -0.48800 1.72e-01 6.39e-01 3.59e-01 3.58e-01 2.30e-03
STRESS ABIOTIC HEAT 76 5.96e-07 4.92e-06 0.5640 -0.150000 -0.342000 -0.207000 -0.35900 -0.08140 2.40e-02 2.47e-07 1.78e-03 6.40e-08 2.20e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE 21 2.64e-02 5.45e-02 0.5550 0.149000 0.396000 0.328000 0.08580 0.11700 2.38e-01 1.66e-03 9.23e-03 4.96e-01 3.52e-01
PROTEIN DEGRADATION UBIQUITIN 22 5.72e-02 9.60e-02 0.5510 -0.200000 -0.322000 -0.287000 -0.08790 -0.26400 1.04e-01 8.85e-03 1.99e-02 4.76e-01 3.22e-02
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 10 5.58e-02 9.52e-02 0.5470 -0.291000 -0.002330 -0.069900 0.42600 -0.16700 1.11e-01 9.90e-01 7.02e-01 1.97e-02 3.60e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII 10 4.67e-02 8.40e-02 0.5400 -0.249000 -0.182000 -0.319000 0.28000 0.12700 1.73e-01 3.19e-01 8.05e-02 1.26e-01 4.88e-01
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE 15 1.05e-02 2.48e-02 0.5360 0.248000 0.059000 0.221000 0.05670 -0.41200 9.64e-02 6.93e-01 1.38e-01 7.04e-01 5.74e-03
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE 16 3.09e-03 9.28e-03 0.5320 -0.141000 -0.034400 -0.230000 0.32800 -0.31900 3.29e-01 8.12e-01 1.12e-01 2.30e-02 2.70e-02
STRESS BIOTIC PR-PROTEINS 105 9.71e-23 2.40e-21 0.5300 -0.252000 -0.158000 -0.270000 0.33900 -0.07170 7.99e-06 5.14e-03 1.74e-06 2.02e-09 2.05e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES 53 5.63e-05 2.93e-04 0.5290 0.151000 0.336000 0.328000 0.07710 0.17700 5.71e-02 2.33e-05 3.63e-05 3.32e-01 2.61e-02
RNA RNA BINDING 89 2.65e-11 3.28e-10 0.5290 -0.217000 -0.212000 -0.035200 -0.22300 -0.37100 4.05e-04 5.51e-04 5.66e-01 2.83e-04 1.45e-09
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 206 4.17e-47 4.13e-45 0.5280 0.124000 -0.010800 0.166000 0.36400 -0.32100 2.22e-03 7.89e-01 3.94e-05 2.08e-19 1.87e-15
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY 16 5.86e-02 9.67e-02 0.5210 -0.375000 -0.137000 -0.287000 -0.09700 0.14300 9.46e-03 3.43e-01 4.67e-02 5.02e-01 3.21e-01
SIGNALLING RECEPTOR KINASES MISC 37 1.71e-05 1.13e-04 0.5110 -0.166000 0.162000 0.136000 0.39000 0.19000 8.07e-02 8.87e-02 1.51e-01 3.95e-05 4.52e-02
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY 16 3.60e-04 1.46e-03 0.4910 -0.158000 -0.362000 0.154000 0.02280 -0.24600 2.73e-01 1.21e-02 2.87e-01 8.75e-01 8.80e-02
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR) 11 1.91e-01 2.49e-01 0.4910 0.089900 -0.207000 -0.079700 -0.23500 -0.35900 6.06e-01 2.35e-01 6.47e-01 1.78e-01 3.94e-02
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 11 1.83e-01 2.45e-01 0.4820 0.408000 0.032300 0.218000 -0.13300 0.00308 1.92e-02 8.53e-01 2.11e-01 4.46e-01 9.86e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 12 2.72e-01 3.33e-01 0.4820 0.399000 0.195000 0.165000 0.03120 0.08040 1.66e-02 2.43e-01 3.22e-01 8.52e-01 6.30e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE 59 7.16e-04 2.73e-03 0.4800 -0.228000 -0.222000 -0.236000 -0.05650 -0.26600 2.43e-03 3.20e-03 1.73e-03 4.53e-01 4.17e-04
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION 14 1.51e-01 2.11e-01 0.4790 0.084900 -0.254000 -0.107000 -0.26700 -0.27300 5.82e-01 9.97e-02 4.87e-01 8.39e-02 7.68e-02
MISC MISC2 18 1.78e-02 3.91e-02 0.4760 0.208000 0.025400 -0.053500 -0.20400 0.37200 1.27e-01 8.52e-01 6.94e-01 1.33e-01 6.32e-03
MISC GDSL-MOTIF LIPASE 43 9.37e-08 8.43e-07 0.4680 -0.170000 0.353000 -0.077500 0.19900 0.14500 5.43e-02 6.30e-05 3.79e-01 2.43e-02 1.01e-01
REDOX GLUTAREDOXINS 16 9.84e-03 2.43e-02 0.4520 0.099100 -0.112000 0.214000 0.11900 0.35000 4.93e-01 4.37e-01 1.38e-01 4.12e-01 1.54e-02
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR 75 2.38e-05 1.47e-04 0.4510 -0.070300 -0.303000 -0.144000 -0.16700 -0.24200 2.93e-01 5.73e-06 3.16e-02 1.26e-02 2.92e-04
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX 178 5.55e-12 7.85e-11 0.4370 0.167000 0.173000 0.170000 0.31900 0.04860 1.19e-04 6.65e-05 9.49e-05 2.19e-13 2.64e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 19 7.90e-02 1.17e-01 0.4330 0.228000 -0.000811 0.222000 -0.01480 0.29300 8.54e-02 9.95e-01 9.41e-02 9.11e-01 2.70e-02
PROTEIN FOLDING 12 1.95e-01 2.50e-01 0.4290 0.222000 -0.003920 0.254000 -0.17000 0.20300 1.84e-01 9.81e-01 1.27e-01 3.07e-01 2.24e-01
HORMONE METABOLISM AUXIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 52 1.36e-02 3.13e-02 0.4280 0.205000 0.254000 0.142000 0.19000 0.14100 1.04e-02 1.52e-03 7.70e-02 1.76e-02 7.83e-02
STRESS BIOTIC RECEPTORS 10 8.67e-02 1.26e-01 0.4230 -0.018300 0.056700 -0.247000 0.33400 0.05360 9.20e-01 7.56e-01 1.76e-01 6.71e-02 7.69e-01
RNA REGULATION OF TRANSCRIPTION BHLH,BASIC HELIX-LOOP-HELIX FAMILY 13 4.03e-01 4.59e-01 0.4030 -0.256000 -0.110000 -0.197000 0.11800 -0.17800 1.10e-01 4.94e-01 2.18e-01 4.60e-01 2.67e-01
CELL VESICLE TRANSPORT 35 4.59e-02 8.40e-02 0.3970 0.084600 0.130000 0.245000 0.16300 0.21600 3.86e-01 1.83e-01 1.21e-02 9.48e-02 2.68e-02
SIGNALLING LIGHT 28 2.32e-02 5.00e-02 0.3860 -0.332000 0.007500 -0.125000 -0.10300 -0.11000 2.35e-03 9.45e-01 2.51e-01 3.47e-01 3.14e-01
PROTEIN DEGRADATION 54 7.90e-03 2.00e-02 0.3780 0.105000 0.242000 0.181000 0.16700 -0.11200 1.82e-01 2.07e-03 2.14e-02 3.33e-02 1.56e-01
RNA PROCESSING 45 3.50e-04 1.46e-03 0.3710 0.124000 -0.005350 0.093800 -0.12600 -0.31300 1.50e-01 9.50e-01 2.76e-01 1.45e-01 2.82e-04
RNA REGULATION OF TRANSCRIPTION BZIP TRANSCRIPTION FACTOR FAMILY 11 7.15e-01 7.45e-01 0.3710 -0.089400 -0.261000 -0.213000 -0.11900 0.04020 6.08e-01 1.33e-01 2.20e-01 4.93e-01 8.18e-01
SECONDARY METABOLISM PHENYLPROPANOIDS 23 2.80e-02 5.55e-02 0.3700 0.059800 0.251000 -0.051500 0.26100 -0.01680 6.20e-01 3.75e-02 6.69e-01 3.06e-02 8.89e-01
PROTEIN SYNTHESIS INITIATION 40 1.31e-04 6.46e-04 0.3690 0.245000 -0.238000 -0.043900 -0.09480 -0.09110 7.40e-03 9.09e-03 6.31e-01 3.00e-01 3.19e-01
MINOR CHO METABOLISM OTHERS 30 6.80e-02 1.06e-01 0.3460 0.230000 0.125000 0.147000 -0.14100 0.09730 2.92e-02 2.36e-01 1.63e-01 1.81e-01 3.56e-01
CELL ORGANISATION 100 4.90e-05 2.76e-04 0.3380 -0.270000 -0.166000 -0.103000 -0.03960 -0.04200 3.08e-06 4.17e-03 7.45e-02 4.94e-01 4.68e-01
NOT ASSIGNED NO ONTOLOGY HYDROXYPROLINE RICH PROTEINS 37 4.63e-03 1.27e-02 0.3380 -0.232000 0.024900 -0.090500 -0.21900 -0.06010 1.47e-02 7.93e-01 3.41e-01 2.10e-02 5.27e-01
STRESS ABIOTIC DROUGHT/SALT 37 6.84e-02 1.06e-01 0.3320 0.003950 0.238000 0.113000 0.08310 0.18400 9.67e-01 1.22e-02 2.34e-01 3.82e-01 5.26e-02
MISC GCN5-RELATED N-ACETYLTRANSFERASE 17 3.46e-01 4.17e-01 0.3310 0.199000 -0.005340 0.052500 0.11000 0.23400 1.56e-01 9.70e-01 7.08e-01 4.32e-01 9.44e-02
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN 10 4.65e-01 5.18e-01 0.3270 0.068900 -0.283000 -0.082300 -0.06490 0.10600 7.06e-01 1.22e-01 6.52e-01 7.22e-01 5.63e-01
MISC ACID AND OTHER PHOSPHATASES 20 4.82e-01 5.30e-01 0.3260 0.225000 0.168000 0.166000 0.00572 -0.00848 8.18e-02 1.92e-01 2.00e-01 9.65e-01 9.48e-01
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED 32 4.84e-02 8.41e-02 0.3240 0.104000 -0.106000 0.000352 -0.15100 0.24500 3.09e-01 2.98e-01 9.97e-01 1.39e-01 1.66e-02
DNA UNSPECIFIED 33 2.74e-02 5.53e-02 0.3150 0.134000 -0.034700 0.154000 -0.06100 -0.23000 1.84e-01 7.30e-01 1.27e-01 5.44e-01 2.22e-02
NOT ASSIGNED NO ONTOLOGY ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN 23 4.03e-01 4.59e-01 0.3020 0.219000 0.049100 0.059500 0.00996 0.19300 6.91e-02 6.84e-01 6.21e-01 9.34e-01 1.09e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 14 2.01e-01 2.55e-01 0.3000 -0.083700 0.081500 -0.262000 0.01740 0.08700 5.88e-01 5.98e-01 9.02e-02 9.10e-01 5.73e-01
MISC PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN 42 2.52e-04 1.14e-03 0.2880 -0.132000 0.195000 0.071200 -0.13300 0.06770 1.38e-01 2.85e-02 4.24e-01 1.35e-01 4.48e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE MITOCHONDRIAL MEMBRANE 25 7.68e-02 1.15e-01 0.2810 0.148000 0.004240 -0.008200 0.19300 -0.14000 2.01e-01 9.71e-01 9.43e-01 9.47e-02 2.26e-01
PROTEIN TARGETING NUCLEUS 17 4.58e-01 5.15e-01 0.2770 -0.042500 0.043300 0.131000 0.08070 -0.22300 7.62e-01 7.57e-01 3.50e-01 5.65e-01 1.12e-01
MISC SHORT CHAIN DEHYDROGENASE/REDUCTASE (SDR) 31 4.79e-02 8.41e-02 0.2770 -0.000395 0.081700 0.101000 -0.16300 0.18200 9.97e-01 4.31e-01 3.31e-01 1.15e-01 8.00e-02
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES 43 6.35e-02 1.01e-01 0.2730 -0.041100 0.160000 0.006060 0.07730 0.20300 6.41e-01 7.00e-02 9.45e-01 3.80e-01 2.10e-02
SIGNALLING CALCIUM 39 1.63e-02 3.67e-02 0.2690 -0.146000 -0.127000 -0.032900 0.08940 0.16000 1.14e-01 1.70e-01 7.22e-01 3.34e-01 8.39e-02
NOT ASSIGNED NO ONTOLOGY C2 DOMAIN-CONTAINING PROTEIN 21 2.47e-01 3.06e-01 0.2680 -0.107000 -0.041700 -0.023900 0.17600 0.16500 3.94e-01 7.41e-01 8.50e-01 1.63e-01 1.91e-01
RNA REGULATION OF TRANSCRIPTION C2H2 ZINC FINGER FAMILY 31 1.66e-01 2.28e-01 0.2600 -0.134000 -0.122000 0.018400 -0.18200 -0.03430 1.95e-01 2.38e-01 8.59e-01 7.89e-02 7.41e-01
MISC BETA 1,3 GLUCAN HYDROLASES GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 19 1.26e-01 1.78e-01 0.2580 -0.097100 0.140000 0.023200 -0.18600 -0.04700 4.64e-01 2.91e-01 8.61e-01 1.61e-01 7.23e-01
PROTEIN POSTRANSLATIONAL MODIFICATION 180 3.14e-08 3.45e-07 0.2550 -0.100000 -0.137000 -0.159000 0.10200 0.02930 2.04e-02 1.57e-03 2.37e-04 1.84e-02 4.98e-01
NOT ASSIGNED NO ONTOLOGY EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN 13 6.78e-01 7.15e-01 0.2540 -0.120000 0.029400 -0.088600 0.10400 0.17400 4.54e-01 8.55e-01 5.80e-01 5.15e-01 2.76e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES TRIACYLGLYCEROL LIPASE 18 4.02e-01 4.59e-01 0.2280 0.039900 -0.097100 -0.196000 0.04610 0.01640 7.69e-01 4.76e-01 1.49e-01 7.35e-01 9.04e-01
STRESS ABIOTIC UNSPECIFIED 45 1.19e-01 1.70e-01 0.2240 -0.076500 0.020500 -0.009330 0.00505 0.21000 3.75e-01 8.12e-01 9.14e-01 9.53e-01 1.49e-02
MISC BETA 1,3 GLUCAN HYDROLASES 14 9.29e-01 9.48e-01 0.2230 -0.004700 0.150000 0.079600 0.12100 0.07830 9.76e-01 3.32e-01 6.06e-01 4.32e-01 6.12e-01
STRESS BIOTIC 51 6.29e-02 1.01e-01 0.2210 0.079300 0.079900 -0.068100 0.11600 0.13500 3.27e-01 3.23e-01 4.00e-01 1.52e-01 9.52e-02
DNA REPAIR 23 5.42e-01 5.89e-01 0.2210 -0.141000 -0.003280 0.038800 0.00772 -0.16500 2.41e-01 9.78e-01 7.48e-01 9.49e-01 1.71e-01
RNA REGULATION OF TRANSCRIPTION C3H ZINC FINGER FAMILY 15 6.28e-01 6.69e-01 0.2080 -0.032900 -0.102000 -0.100000 0.14600 0.01790 8.25e-01 4.95e-01 5.02e-01 3.27e-01 9.05e-01
PROTEIN DEGRADATION SERINE PROTEASE 13 9.80e-01 9.80e-01 0.2050 0.109000 0.109000 0.090000 0.09320 0.03800 4.95e-01 4.97e-01 5.74e-01 5.61e-01 8.12e-01
DEVELOPMENT UNSPECIFIED 125 1.84e-03 5.88e-03 0.1950 0.007640 0.164000 -0.010800 0.10300 -0.01350 8.83e-01 1.55e-03 8.35e-01 4.64e-02 7.95e-01
MISC OXIDASES - COPPER, FLAVONE ETC 33 1.81e-01 2.45e-01 0.1780 -0.020500 0.083500 -0.130000 -0.03140 -0.08100 8.38e-01 4.06e-01 1.98e-01 7.55e-01 4.20e-01
MISC MYROSINASES-LECTIN-JACALIN 12 9.61e-01 9.71e-01 0.1700 0.002580 0.109000 0.043500 0.08630 -0.08660 9.88e-01 5.13e-01 7.94e-01 6.05e-01 6.04e-01
RNA PROCESSING RIBONUCLEASES 20 8.59e-01 8.85e-01 0.1620 0.045700 0.038300 0.031100 0.02570 -0.14500 7.23e-01 7.67e-01 8.10e-01 8.42e-01 2.60e-01
PROTEIN DEGRADATION UBIQUITIN E3 RING 171 3.61e-01 4.27e-01 0.1450 -0.070600 -0.071600 -0.061300 -0.08440 -0.01290 1.12e-01 1.06e-01 1.67e-01 5.69e-02 7.71e-01
SIGNALLING G-PROTEINS 57 5.53e-01 5.95e-01 0.1440 0.036300 0.011100 0.074300 0.11400 -0.02460 6.36e-01 8.85e-01 3.32e-01 1.36e-01 7.48e-01
RNA REGULATION OF TRANSCRIPTION UNCLASSIFIED 140 2.26e-01 2.83e-01 0.1430 -0.026100 -0.042700 -0.026500 -0.11000 -0.07230 5.95e-01 3.84e-01 5.89e-01 2.44e-02 1.40e-01
NOT ASSIGNED UNKNOWN 3467 1.97e-30 9.75e-29 0.1160 -0.009710 -0.072100 0.008370 -0.08020 0.04090 3.67e-01 2.12e-11 4.37e-01 8.93e-14 1.45e-04
NOT ASSIGNED NO ONTOLOGY 971 3.62e-01 4.27e-01 0.0353 -0.008630 0.024700 0.019600 -0.00232 -0.01330 6.49e-01 1.93e-01 3.03e-01 9.03e-01 4.85e-01



Detailed Gene set reports


RNA_REGULATION_OF_TRANSCRIPTION_TRIHELIX,_TRIPLE-HELIX_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_TRIHELIX,_TRIPLE-HELIX_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 18
pMANOVA 1.19e-06
p.adjustMANOVA 9.07e-06
s.dist 1.12
s.de0 -0.474
s.de3 -0.742
s.de6 -0.38
s.de12 -0.504
s.de24 -0.285
p.de0 0.000504
p.de3 5.05e-08
p.de6 0.00524
p.de12 0.000216
p.de24 0.0362




Top 20 genes
Gene de3 de12
AT2G44730 -9541 -10206
AT5G47660 -9604 -9913
AT5G28300 -8968 -10463
AT1G76880 -8482 -10646
AT4G31270 -8407 -9456
AT3G24860 -8319 -9006
AT3G58630 -6984 -8746
AT3G11100 -8467 -5954
AT3G10040 -9055 -4528
AT3G01560 -4636 -8382
AT3G24490 -9186 -4179
AT1G31310 -3921 -8727
AT3G54390 -7054 -4221
AT5G05550 -4024 -4108
AT4G29030 -4139 -2090
AT5G14540 -1441 -5729

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G01560 -9071 -4636 -7734 -8382 -7703
AT1G76880 -8859 -8482 -9927 -10646 -9790
AT2G44730 -8150 -9541 -8178 -10206 -7733
AT5G28300 -7418 -8968 -8930 -10463 4130
AT3G24860 -7063 -8319 -5083 -9006 -9508
AT3G10040 -6995 -9055 -9070 -4528 5622
AT5G14540 -6916 -1441 -1517 -5729 -3846
AT1G11850 -6729 -7654 -615 7154 -8844
AT4G31270 -6010 -8407 -6144 -9456 -5767
AT4G29030 -5897 -4139 2185 -2090 -10868
AT3G54390 -5890 -7054 -5349 -4221 7516
AT3G24490 -5698 -9186 -3180 -4179 79
AT1G21200 -5439 -6802 -6352 7301 3406
AT3G11100 2902 -8467 286 -5954 -1759
AT5G05550 2769 -4024 4366 -4108 -7597
AT5G47660 -2622 -9604 -7669 -9913 -9638
AT3G58630 -1853 -6984 -5730 -8746 290
AT1G31310 1086 -3921 6975 -8727 -8423





RNA_REGULATION_OF_TRANSCRIPTION_G2-LIKE_TRANSCRIPTION_FACTOR_FAMILY,_GARP

RNA_REGULATION_OF_TRANSCRIPTION_G2-LIKE_TRANSCRIPTION_FACTOR_FAMILY,_GARP
metric value
setSize 11
pMANOVA 0.00155
p.adjustMANOVA 0.00511
s.dist 1.1
s.de0 -0.701
s.de3 -0.398
s.de6 -0.634
s.de12 -0.315
s.de24 -0.222
p.de0 5.73e-05
p.de3 0.0222
p.de6 0.000269
p.de12 0.0701
p.de24 0.202




Top 20 genes
Gene de0 de6
AT3G10760 -8958 -9055
AT1G69580 -9327 -8277
AT4G35940 -8681 -8666
AT2G38300 -10096 -7065
AT5G05090 -8432 -8187
AT2G40260 -8330 -7507
AT2G20400 -5579 -7756
AT5G06800 -8655 -4572
AT1G14600 -4858 -5300
AT3G24120 -1810 -4236
AT2G42660 -4271 -1516

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G38300 -10096 -4874 -7065 -1017 18
AT1G69580 -9327 -5626 -8277 -6542 1842
AT3G10760 -8958 2609 -9055 1145 -1961
AT4G35940 -8681 -9205 -8666 -10551 -5157
AT5G06800 -8655 -5967 -4572 -2526 -9248
AT5G05090 -8432 2417 -8187 -3822 -9257
AT2G40260 -8330 -4655 -7507 178 518
AT2G20400 -5579 -4707 -7756 -6135 -7203
AT1G14600 -4858 -2755 -5300 -5033 -6105
AT2G42660 -4271 -876 -1516 1961 4001
AT3G24120 -1810 -5534 -4236 -8981 -3471





NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS

NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS
metric value
setSize 35
pMANOVA 1.91e-13
p.adjustMANOVA 3.79e-12
s.dist 1.09
s.de0 -0.439
s.de3 -0.73
s.de6 -0.369
s.de12 -0.355
s.de24 -0.455
p.de0 6.97e-06
p.de3 7.28e-14
p.de6 0.000159
p.de12 0.000276
p.de24 3.11e-06




Top 20 genes
Gene de3 de24
AT5G28630 -9625 -11037
AT2G05510 -9651 -10504
AT5G46730 -8967 -11156
AT1G67870 -9530 -10421
AT5G61660 -8652 -11105
AT1G04660 -8414 -10921
AT1G04800 -9399 -8946
AT1G15280 -8694 -9626
AT4G18280 -9584 -7103
AT4G30450 -7600 -8957
AT3G59640 -8495 -7680
AT4G38710 -8909 -7312
AT1G27090 -7563 -8432
AT1G75550 -7346 -8251
AT4G08230 -8772 -6459
AT1G07135 -8225 -6388
AT4G30460 -7870 -6655
AT4G36230 -5815 -8411
AT5G49350 -6837 -6814
AT3G04640 -9341 -4676

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G67870 -10166 -9530 -8090 -8365 -10421
AT1G04800 -10117 -9399 -2312 -5812 -8946
AT5G28630 -10104 -9625 -10034 -8617 -11037
AT2G05510 -10091 -9651 -9926 -10611 -10504
AT1G07135 -10054 -8225 -10251 -5155 -6388
AT3G29075 -10000 -9207 -9001 -10640 1763
AT5G46730 -9937 -8967 -2727 -10094 -11156
AT1G04660 -9597 -8414 -3274 5604 -10921
AT1G15280 -9592 -8694 -8591 -6261 -9626
AT1G75550 -9489 -7346 -1361 -199 -8251
AT1G66820 9243 9313 9702 2748 -5836
AT3G04640 -9256 -9341 -8484 -4980 -4676
AT4G36230 -9197 -5815 -1559 -5551 -8411
AT5G61660 -8805 -8652 2115 1758 -11105
AT4G38710 -7570 -8909 -7335 -8074 -7312
AT4G08230 -7337 -8772 -7784 -3190 -6459
AT4G21620 7099 -6269 -1105 -4096 -1553
AT5G11700 -7035 -2255 -2267 7601 -6361
AT5G49350 -6967 -6837 -3766 -1609 -6814
AT4G22740 -6691 -9287 -8844 -9572 -3548
AT4G30460 -5992 -7870 -7433 -7607 -6655
AT3G59640 -5990 -8495 -4941 -9301 -7680
AT4G18280 -4985 -9584 -7916 -8618 -7103
AT4G10330 4842 -117 2959 3087 7769
AT2G05540 4793 -7990 -3880 -5003 -5133
AT5G17650 -4446 -7695 -9721 -7347 -4890
AT4G17620 -3883 -8132 -5661 -4350 -1684
AT3G06780 3732 -7599 3467 -4239 5845
AT4G32920 3250 -6294 -1799 -3452 -1417
AT4G37682 -1536 -1918 5820 6741 -4374
AT4G30450 -1167 -7600 -2335 -2053 -8957
AT4G29020 -954 -4508 3224 2117 -6086
AT1G27090 -304 -7563 43 -8598 -8432
AT5G47020 -297 -2621 -2023 -4515 -9563
AT2G15780 166 -8245 -10184 -7201 8751





TRANSPORT_METABOLITE_TRANSPORTERS_AT_THE_ENVELOPE_MEMBRANE

TRANSPORT_METABOLITE_TRANSPORTERS_AT_THE_ENVELOPE_MEMBRANE
metric value
setSize 14
pMANOVA 0.00138
p.adjustMANOVA 0.00472
s.dist 0.941
s.de0 0.0992
s.de3 0.605
s.de6 0.478
s.de12 0.477
s.de24 0.233
p.de0 0.521
p.de3 8.75e-05
p.de6 0.00197
p.de12 0.00202
p.de24 0.131




Top 20 genes
Gene de3 de6
AT5G11230 9893 9375
AT4G32390 9111 9817
AT1G53660 9023 9087
AT3G14410 9002 9018
AT1G48230 9960 8011
AT2G25520 9785 7730
AT3G17430 8756 7920
AT3G11320 8625 5709
AT5G05820 8395 5494
AT1G12500 9120 4620
AT1G06470 2831 4316

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT4G32390 9379 9111 9817 5105 6322
AT3G14410 7719 9002 9018 5807 1561
AT1G12500 -6766 9120 4620 4416 250
AT4G03950 6632 3413 -4769 87 -8572
AT3G11320 -6637 8625 5709 9254 6443
AT5G11230 6409 9893 9375 9357 7289
AT2G25520 6126 9785 7730 9400 5983
AT3G17430 -5119 8756 7920 6189 -353
AT1G43310 -4714 -6185 -6396 -3062 -7705
AT1G53660 3198 9023 9087 8200 6859
AT3G10290 -2199 720 -4053 -8029 915
AT1G06470 -1404 2831 4316 5586 -8387
AT1G48230 833 9960 8011 9037 1860
AT5G05820 -598 8395 5494 -1637 6226





MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_OXIDASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_OXIDASE
metric value
setSize 11
pMANOVA 0.0101
p.adjustMANOVA 0.0243
s.dist 0.939
s.de0 0.426
s.de3 0.314
s.de6 0.598
s.de12 0.395
s.de24 0.297
p.de0 0.0145
p.de3 0.0709
p.de6 0.00059
p.de12 0.0232
p.de24 0.0884




Top 20 genes
Gene de6 de0
AT2G47380 9792 10012
AT1G52710 8787 9906
AT3G62400 7225 9834
AT4G37830 6882 9649
AT1G28140 6443 7950
AT2G07687 9545 4498
AT1G48510 7633 4935
AT1G57600 8130 1846
AT5G61310 1089 236

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G47380 10012 6294 9792 6975 7543
AT1G52710 9906 6134 8787 7191 -377
AT3G62400 9834 7439 7225 8162 3240
AT4G37830 9649 3871 6882 -5799 4148
AT1G28140 7950 9010 6443 -7368 731
AT1G09794 -7653 -9304 -8650 -8048 -5926
AT1G48510 4935 3504 7633 9487 8830
AT2G07695 -4746 -262 8318 7632 1429
AT2G07687 4498 6495 9545 9301 7566
AT1G57600 1846 10176 8130 9061 2987
AT5G61310 236 -3128 1089 1281 -8403





TRANSPORT_AMINO_ACIDS

TRANSPORT_AMINO_ACIDS
metric value
setSize 13
pMANOVA 0.00138
p.adjustMANOVA 0.00472
s.dist 0.914
s.de0 0.0523
s.de3 0.609
s.de6 0.289
s.de12 0.563
s.de24 0.249
p.de0 0.744
p.de3 0.000143
p.de6 0.0714
p.de12 0.000443
p.de24 0.12




Top 20 genes
Gene de3 de12
AT1G31830 10358 9186
AT1G31820 8170 9360
AT3G54830 7655 8731
AT2G33260 6511 9184
AT3G19553 8858 6445
AT1G48640 5604 8534
AT1G61270 5002 8327
AT3G01760 5420 6081
AT3G13620 5076 5277
AT5G41800 4997 2985
AT1G25530 9629 1468

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G54830 9586 7655 -4229 8731 -11153
AT3G01760 -9548 5420 82 6081 -4315
AT5G38820 8467 2153 9457 -4752 8915
AT5G19500 -6573 6901 -8085 -4049 5273
AT1G25530 6446 9629 -1954 1468 2518
AT1G31830 6188 10358 7772 9186 4089
AT3G13620 -3507 5076 -202 5277 7410
AT1G61270 -3426 5002 -198 8327 3
AT1G48640 -1748 5604 8458 8534 2799
AT3G19553 -679 8858 4471 6445 -9241
AT1G31820 657 8170 4022 9360 1631
AT2G33260 -475 6511 7376 9184 6697
AT5G41800 382 4997 9322 2985 4787





TRANSPORT_SUGARS

TRANSPORT_SUGARS
metric value
setSize 22
pMANOVA 0.000165
p.adjustMANOVA 0.000779
s.dist 0.882
s.de0 0.184
s.de3 0.562
s.de6 0.382
s.de12 0.495
s.de24 0.192
p.de0 0.135
p.de3 5.04e-06
p.de6 0.00193
p.de12 5.73e-05
p.de24 0.118




Top 20 genes
Gene de3 de12
AT3G05150 10537 9276
AT3G05155 9752 9437
AT5G41760 10209 8620
AT3G05160 9943 8568
AT3G20460 5831 8237
AT1G54730 4926 9475
AT4G35335 7932 5261
AT2G22730 3437 9421
AT4G04760 5800 3841
AT5G65000 6228 2901
AT2G48020 3837 4310
AT1G19450 8923 1582
AT4G04750 8842 1359
AT2G43240 5990 1774
AT5G18840 635 9297
AT5G57100 9266 552

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G41760 9315 10209 9536 8620 5639
AT1G67300 8813 237 -1243 -2473 1040
AT1G75220 8449 7231 8060 -937 -388
AT3G05150 8191 10537 9928 9276 8836
AT5G65000 7852 6228 6626 2901 1421
AT5G59250 7438 9351 5552 -580 6503
AT5G57100 6840 9266 6452 552 657
AT1G54730 -6457 4926 849 9475 -7607
AT3G05165 -6452 -161 -3138 8852 -6302
AT5G18840 5515 635 -6329 9297 -9801
AT4G04750 -5053 8842 5753 1359 3622
AT3G20460 -4945 5831 -31 8237 4296
AT3G05155 -4237 9752 9509 9437 5161
AT5G17010 3411 7235 1916 -675 2777
AT2G48020 -3317 3837 -418 4310 694
AT1G05030 3229 -461 7733 -106 3291
AT1G19450 -2309 8923 4820 1582 2404
AT3G05160 1605 9943 3194 8568 -10521
AT4G04760 1304 5800 -1287 3841 1425
AT4G35335 -606 7932 8764 5261 4281
AT2G22730 544 3437 5526 9421 -1520
AT2G43240 20 5990 346 1774 4388





RNA_PROCESSING_SPLICING

RNA_PROCESSING_SPLICING
metric value
setSize 19
pMANOVA 0.00396
p.adjustMANOVA 0.0112
s.dist 0.785
s.de0 -0.267
s.de3 -0.425
s.de6 -0.259
s.de12 -0.379
s.de24 -0.392
p.de0 0.0436
p.de3 0.00134
p.de6 0.0508
p.de12 0.00425
p.de24 0.00307




Top 20 genes
Gene de3 de24
AT1G10320 -9594 -11087
AT1G60200 -9529 -11112
AT2G29210 -9100 -10591
AT4G02400 -8831 -9091
AT3G27550 -7890 -8608
AT5G38600 -8391 -7550
AT4G21660 -9426 -6446
AT3G25440 -8808 -6668
AT1G67210 -5211 -6163
AT3G23325 -1017 -8238
AT3G06455 -8474 -561

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G10320 -10189 -9594 -9579 -10659 -11087
AT1G60200 -10033 -9529 -9285 -10393 -11112
AT2G29210 -9964 -9100 -8972 -10534 -10591
AT3G06455 -9121 -8474 -3082 -7008 -561
AT4G14342 8700 9851 9832 6086 572
AT5G64270 8619 2617 4672 3634 72
AT5G38600 -8522 -8391 -5034 -2676 -7550
AT4G38780 -7933 3416 -3699 -555 -7693
AT1G67210 -7673 -5211 -1963 -4006 -6163
AT3G25440 -7171 -8808 -5642 -8603 -6668
AT1G06960 7082 6817 8994 6624 1226
AT4G13070 -7075 -4358 -819 5621 1912
AT4G21660 -6930 -9426 -7902 -9547 -6446
AT4G02400 -6003 -8831 -8690 -10328 -9091
AT5G54520 4939 1218 -2747 -8311 -4720
AT3G11960 4358 2348 1070 2839 -1946
AT3G27550 2412 -7890 -6636 -9868 -8608
AT3G23325 1920 -1017 920 -7063 -8238
AT1G03140 -501 -8400 -3755 -8815 1730





RNA_TRANSCRIPTION

RNA_TRANSCRIPTION
metric value
setSize 15
pMANOVA 0.0308
p.adjustMANOVA 0.0598
s.dist 0.739
s.de0 -0.23
s.de3 -0.388
s.de6 -0.42
s.de12 -0.2
s.de24 -0.357
p.de0 0.123
p.de3 0.00936
p.de6 0.0049
p.de12 0.181
p.de24 0.0165




Top 20 genes
Gene de6 de3
AT1G75510 -9460 -8711
AT4G20340 -7635 -8568
AT1G03280 -6460 -9324
AT4G10070 -7688 -6534
AT4G20330 -7047 -7034
AT3G09360 -5907 -8288
AT5G10070 -7082 -3516
AT3G49000 -5620 -3305
AT5G49530 -5002 -3213
AT5G15700 -1786 -4270
AT2G19920 -1241 -5496
AT2G45100 -3897 -99

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G03280 -9163 -9324 -6460 -4400 -7180
AT3G09360 -9153 -8288 -5907 -6817 3445
AT1G06790 8871 7265 3639 6118 -1845
AT4G10070 -8060 -6534 -7688 -9277 -10056
AT2G19930 -5650 6778 -2143 7845 -2314
AT4G20340 -4841 -8568 -7635 -8299 -7211
AT4G20330 -2794 -7034 -7047 -9041 -703
AT3G49000 -2734 -3305 -5620 2635 -3710
AT5G39840 2649 2526 1598 8388 -5007
AT1G75510 -2167 -8711 -9460 -7490 -53
AT5G15700 -1743 -4270 -1786 -5730 -10378
AT2G19920 -1455 -5496 -1241 -2141 -3349
AT5G49530 1316 -3213 -5002 -3738 -9920
AT2G45100 -1121 -99 -3897 -3760 -7044
AT5G10070 -149 -3516 -7082 -3049 -4365





PROTEIN_DEGRADATION_AAA_TYPE

PROTEIN_DEGRADATION_AAA_TYPE
metric value
setSize 24
pMANOVA 4.52e-06
p.adjustMANOVA 3.19e-05
s.dist 0.728
s.de0 0.079
s.de3 -0.468
s.de6 -0.464
s.de12 -0.276
s.de24 -0.116
p.de0 0.503
p.de3 7.32e-05
p.de6 8.42e-05
p.de12 0.0193
p.de24 0.325




Top 20 genes
Gene de3 de6
AT3G28540 -9282 -10155
AT3G28510 -8107 -9736
AT2G18193 -7031 -10229
AT5G17760 -8970 -7488
AT3G28580 -6116 -10110
AT4G30250 -7922 -7781
AT1G43910 -8141 -5925
AT2G18330 -6426 -7290
AT1G64110 -4793 -9314
AT5G16930 -6421 -5151
AT3G19740 -6824 -4667
AT5G57480 -6985 -4365
AT1G02890 -5957 -4799
AT4G05380 -7385 -2835
AT3G50940 -4221 -4539
AT4G25835 -5062 -3491
AT2G45500 -3528 -2549
AT4G02480 -3989 -1989
AT1G50140 -1434 -720

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G43910 9819 -8141 -5925 -8020 9000
AT1G64110 8964 -4793 -9314 -10310 -10694
AT4G24860 8811 4891 6593 -7250 -9482
AT3G28540 -8562 -9282 -10155 -9820 1807
AT4G30250 -8148 -7922 -7781 -10499 -10797
AT5G57480 -8102 -6985 -4365 2850 2442
AT4G25835 7962 -5062 -3491 -5927 -9524
AT2G46620 7522 2940 -5967 9149 2226
AT1G62130 6038 1100 -3609 -1644 -4230
AT4G36580 6032 3818 3105 -1634 -7048
AT5G17760 5672 -8970 -7488 -10071 8349
AT1G02890 -5554 -5957 -4799 3847 -4497
AT3G50940 -4857 -4221 -4539 -1135 -2212
AT5G16930 4666 -6421 -5151 -6842 -5957
AT1G50140 -4408 -1434 -720 4764 -3124
AT2G45500 -3746 -3528 -2549 -384 2983
AT2G18330 -3154 -6426 -7290 -5398 -7087
AT2G18193 3102 -7031 -10229 -2937 8917
AT4G04180 2860 3580 -2813 1115 -10309
AT3G28580 -2822 -6116 -10110 -6438 4058
AT3G19740 -2074 -6824 -4667 -657 -4986
AT4G02480 -1629 -3989 -1989 536 -6567
AT3G28510 -864 -8107 -9736 -7209 2198
AT4G05380 -393 -7385 -2835 -6619 1709





PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VI

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VI
metric value
setSize 11
pMANOVA 0.00275
p.adjustMANOVA 0.00851
s.dist 0.721
s.de0 -0.326
s.de3 0.363
s.de6 0.0274
s.de12 0.497
s.de24 0.187
p.de0 0.061
p.de3 0.0373
p.de6 0.875
p.de12 0.00431
p.de24 0.284




Top 20 genes
Gene de12 de3
AT2G18890 7975 10341
AT5G37790 8341 8790
AT5G63940 7642 4097
AT5G18910 6643 4266
AT5G65530 7755 3527
AT2G16750 3341 2924
AT1G21590 1379 6886
AT1G77280 3270 1666

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G16750 -9763 2924 -5272 3341 -11023
AT4G35030 -9704 -1738 -4408 -4584 6742
AT1G21590 -5535 6886 -5991 1379 422
AT5G35960 -4537 -1283 -4840 7733 -8847
AT5G18910 -3352 4266 9339 6643 8549
AT2G18890 -3328 10341 7693 7975 -10697
AT5G57670 3288 6114 -3693 -298 3093
AT1G77280 -3071 1666 -7136 3270 1171
AT5G63940 -2928 4097 1372 7642 3253
AT5G65530 1118 3527 7178 7755 8245
AT5G37790 525 8790 7347 8341 8602





NOT_ASSIGNED_NO_ONTOLOGY_DC1_DOMAIN_CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_DC1_DOMAIN_CONTAINING_PROTEIN
metric value
setSize 84
pMANOVA 4.09e-24
p.adjustMANOVA 1.35e-22
s.dist 0.711
s.de0 -0.169
s.de3 0.241
s.de6 0.174
s.de12 0.566
s.de24 0.26
p.de0 0.00744
p.de3 0.000132
p.de6 0.00576
p.de12 2.68e-19
p.de24 3.83e-05




Top 20 genes
Gene de12 de24
AT2G04680 9086 8933
AT1G61840 9239 8659
AT2G19660 9000 8535
AT4G10370 8743 8785
AT1G55430 8476 8726
AT3G11385 8615 8494
AT3G06990 9269 7795
AT3G07000 9308 7645
AT3G46810 8543 7544
AT5G54030 7550 8094
AT4G14980 7493 8064
AT5G45730 9154 6263
AT5G44770 6535 8687
AT3G27500 7839 6680
AT3G59130 6555 7700
AT4G01925 8605 5366
AT5G55770 5845 7299
AT5G55780 6454 6182
AT2G21830 7170 5387
AT3G43890 8809 4159

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G02610 -9989 -1732 -6417 9347 -5385
AT3G13760 -9593 -1818 5089 7047 2539
AT2G44380 8768 5641 6854 982 -2345
AT4G02540 -8730 3004 -2350 1649 -3102
AT2G19650 -8637 -2565 -6744 -206 3602
AT5G02360 -8588 -120 2306 9093 -1402
AT3G46800 -8552 5178 7108 3835 3882
AT1G60420 8354 3775 2605 2035 3367
AT5G03360 -8189 5621 -9533 8481 -8463
AT2G02680 -7888 542 -3433 8309 790
AT5G43520 7512 -3465 1067 -1854 -5227
AT5G40590 7500 6045 -7708 -2324 6636
AT2G16050 -7521 2464 4445 696 -3376
AT3G27500 -7504 4099 -506 7839 6680
AT1G66440 -7117 -517 156 7188 -5756
AT1G20990 -7046 -7081 -6807 7545 -2961
AT5G59940 6972 7883 6564 9372 3455
AT5G37210 -6646 2862 -189 5011 -3677
AT4G11540 -6626 5259 1961 7039 502
AT2G28270 6519 -3273 1223 -2997 -8138
AT3G43890 -6589 4044 4942 8809 4159
AT3G11402 -6585 5182 -2099 1789 2634
AT2G19660 6501 7504 9847 9000 8535
AT5G44770 6435 7165 9737 6535 8687
AT3G45840 -6505 5703 -6580 8133 -8440
AT2G23100 6380 2444 6828 -6168 -608
AT3G48400 -6104 3706 5180 7914 -2970
AT5G48320 -6084 3512 2508 5340 -4362
AT2G21830 6007 10532 5661 7170 5387
AT1G61840 -5893 -702 6215 9239 8659
AT2G44370 5796 -5745 -9731 -1775 1445
AT2G40050 -5839 -2305 -5463 5799 591
AT3G28650 -5643 7433 2173 4055 -5008
AT1G44020 -5618 -2304 2370 8393 -8063
AT5G55780 -5172 3665 8711 6454 6182
AT2G04680 -5148 4298 6505 9086 8933
AT3G11385 -5045 2372 9314 8615 8494
AT5G54040 -4896 3988 2988 3849 5390
AT3G45530 -4833 2455 3597 7345 1857
AT5G42840 4487 6627 -5086 7155 4746
AT4G01350 4429 1509 2192 8307 1616
AT2G37780 -4467 1863 4412 -2917 4493
AT1G66450 -4393 5837 -2501 8726 -16
AT3G46810 -4014 9302 1610 8543 7544
AT2G17740 -3963 -8217 -3325 -7322 -5611
AT4G26380 -3932 -3494 2501 -625 3506
AT5G54030 -3847 4301 5384 7550 8094
AT4G02180 -3704 6110 2087 7706 1192
AT4G13130 -3483 5924 2766 8659 -438
AT3G13590 3426 -709 -1701 4068 6726
AT1G44050 -3394 2631 3848 -1023 1783
AT3G27510 3179 -555 -8141 7764 224
AT5G01480 -3188 1261 -2329 -2550 2717
AT2G13900 -3050 3162 249 4146 3552
AT1G55440 2977 5227 7847 3722 6910
AT4G01925 -2883 8156 6583 8605 5366
AT1G65180 -2835 9160 6575 8229 4046
AT3G06990 2662 7647 9745 9269 7795
AT1G55700 -2406 -1011 3887 5627 6237
AT1G29180 2384 5867 3851 5987 4254
AT5G45730 -2355 5857 3929 9154 6263
AT5G59930 -2187 524 -6420 8693 -355
AT4G15070 -2151 3499 -675 5908 -5014
AT5G22355 2020 3132 -2590 3384 4411
AT5G55770 -1995 8239 7213 5845 7299
AT3G26550 1951 572 356 8304 1846
AT3G50010 -1858 1686 -4079 9290 -8322
AT1G55430 1825 6784 9187 8476 8726
AT3G26240 -1782 -4589 -5842 -7608 -8466
AT4G14980 -1461 10050 6949 7493 8064
AT3G59130 -1304 3235 4741 6555 7700
AT1G69150 -1229 1501 -9684 8475 -2877
AT1G55390 1175 1604 8770 6119 5948
AT1G55380 -1107 -287 384 -548 -780
AT5G42280 957 -579 -3088 8722 -5248
AT2G43220 951 4489 7754 9274 2380
AT2G27660 856 -5414 -3543 3132 -8078
AT4G10370 -748 7109 6578 8743 8785
AT2G02640 -541 443 -5256 5946 3562
AT4G11550 459 8010 8695 4570 5
AT4G11390 -254 4182 200 2378 -5327
AT3G07000 199 5591 9107 9308 7645
AT3G11390 -100 7903 899 2739 3660
AT1G62030 76 5260 4169 1331 4439





NOT_ASSIGNED_NO_ONTOLOGY_PROLINE_RICH_FAMILY

NOT_ASSIGNED_NO_ONTOLOGY_PROLINE_RICH_FAMILY
metric value
setSize 34
pMANOVA 2.88e-13
p.adjustMANOVA 4.75e-12
s.dist 0.709
s.de0 -0.606
s.de3 0.0997
s.de6 -0.226
s.de12 0.0651
s.de24 0.263
p.de0 9.27e-10
p.de3 0.314
p.de6 0.0225
p.de12 0.511
p.de24 0.00789




Top 20 genes
Gene de0 de24
AT3G28550 -10072 8165
AT5G26080 -9356 8382
AT1G23720 -10134 7498
AT5G19810 -9497 7632
AT5G35190 -9791 7200
AT1G70990 -8126 7115
AT5G06630 -10082 5465
AT5G06640 -10159 5291
AT3G54580 -10125 4896
AT4G27850 -5272 8656
AT2G24980 -10191 4172
AT2G28440 -4431 8357
AT3G49845 -5362 6757
AT3G20850 -1326 8685
AT4G13390 -9311 1220
AT2G34670 -1351 6671
AT4G16140 -9569 609
AT3G09000 -2241 2586
AT1G31750 -7759 77
AT1G64450 -472 326

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G24980 -10191 -2566 -9872 4668 4172
AT5G06640 -10159 3291 -9193 4648 5291
AT1G23720 -10134 2874 -4719 3828 7498
AT3G54580 -10125 1726 -9770 3578 4896
AT5G06630 -10082 -219 -10025 5792 5465
AT3G28550 -10072 3346 -4885 289 8165
AT5G11990 -10006 -1179 -8790 -201 -1326
AT5G35190 -9791 6563 -2912 3801 7200
AT3G22070 -9695 -2803 -4157 -7227 -5936
AT4G16140 -9569 -1640 -9018 -2621 609
AT5G19810 -9497 8685 6101 7150 7632
AT5G26080 -9356 5071 7924 7543 8382
AT4G13390 -9311 10576 -5293 -452 1220
AT4G00890 -8574 -4916 -6426 -5646 -1645
AT1G12810 -8561 5693 -3354 -7178 -2230
AT1G70990 -8126 10160 8477 4160 7115
AT2G16630 7691 -145 -6418 -9674 9063
AT1G31750 -7759 -6536 -4654 -3554 77
AT1G61080 -7487 1925 -8144 6108 -3311
AT4G08380 -6036 -5872 -1693 121 -11001
AT4G18570 -5981 4712 -4542 -4853 -5510
AT5G45350 -5934 -8110 -5904 -3469 -1890
AT1G02110 -5759 -7882 905 -10225 -7395
AT3G49845 -5362 10045 -2295 3324 6757
AT4G27850 -5272 -3361 1919 5072 8656
AT2G28440 -4431 9519 1840 -435 8357
AT4G19200 -4137 -8437 -4071 -6179 -4659
AT3G09000 -2241 2358 -1804 -4801 2586
AT2G34670 -1351 -13 839 4404 6671
AT3G20850 -1326 10416 9684 5772 8685
AT3G49840 -955 358 1504 7408 -3856
AT1G63830 -861 5312 -2975 -6300 -6975
AT3G51290 -594 -2699 6813 376 -7403
AT1G64450 -472 4091 2593 -1937 326





STRESS_BIOTIC_PR-PROTEINS_PLANT_DEFENSINS

STRESS_BIOTIC_PR-PROTEINS_PLANT_DEFENSINS
metric value
setSize 10
pMANOVA 0.0358
p.adjustMANOVA 0.0668
s.dist 0.704
s.de0 0.442
s.de3 0.343
s.de6 0.366
s.de12 0.0619
s.de24 -0.212
p.de0 0.0156
p.de3 0.0602
p.de6 0.0453
p.de12 0.735
p.de24 0.245




Top 20 genes
Gene de0 de6
AT4G22235 9639 9956
AT5G33355 9490 9050
AT3G63360 8462 6322
AT4G22230 5095 8767
AT3G05730 1802 8160
AT3G59930 9789 913

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G59930 9789 1245 913 -10669 -8395
AT4G22235 9639 10528 9956 9451 6623
AT5G33355 9490 5011 9050 -10662 -7542
AT3G63360 8462 8824 6322 5478 8155
AT4G22212 -5250 -950 -5847 383 -11148
AT4G22230 5095 4479 8767 6991 -9743
AT4G22217 -4057 7966 6426 5009 7283
AT3G05730 1802 -2185 8160 -3679 -11141
AT4G22214 777 5997 -7277 8578 -1090
AT1G34047 8123 -1433 -771 -10226 -4765





PROTEIN_DEGRADATION_CYSTEINE_PROTEASE

PROTEIN_DEGRADATION_CYSTEINE_PROTEASE
metric value
setSize 12
pMANOVA 0.0244
p.adjustMANOVA 0.0514
s.dist 0.697
s.de0 -0.164
s.de3 -0.344
s.de6 -0.555
s.de12 -0.129
s.de24 -0.121
p.de0 0.325
p.de3 0.0389
p.de6 0.000864
p.de12 0.44
p.de24 0.468




Top 20 genes
Gene de6 de3
AT5G03330 -10108 -7592
AT5G67170 -8814 -8124
AT3G62940 -8855 -8059
AT5G04250 -7373 -8529
AT3G02070 -5019 -6970
AT2G34080 -7847 -4220
AT3G22260 -9748 -3095
AT2G27350 -2001 -5805
AT1G09730 -3787 -1705

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G22260 -8630 -3095 -9748 576 -2245
AT5G03330 -7996 -7592 -10108 -5431 -10891
AT5G67170 -7840 -8124 -8814 -8342 -4985
AT5G04250 6550 -8529 -7373 -8817 -6243
AT3G62940 -5210 -8059 -8855 -10493 -5623
AT3G45310 -5074 7401 480 7515 594
AT2G27350 5035 -5805 -2001 -3387 662
AT1G50670 -3466 953 -6015 -1829 6856
AT3G57810 2836 9569 -10 9202 -2452
AT1G09730 2051 -1705 -3787 4586 -2628
AT2G34080 767 -4220 -7847 -1195 4968
AT3G02070 -13 -6970 -5019 -4790 -5033





SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_I

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_I
metric value
setSize 14
pMANOVA 0.000368
p.adjustMANOVA 0.00146
s.dist 0.668
s.de0 -0.216
s.de3 0.0826
s.de6 0.0949
s.de12 0.609
s.de24 0.112
p.de0 0.161
p.de3 0.593
p.de6 0.539
p.de12 7.96e-05
p.de24 0.47




Top 20 genes
Gene de12 de0
AT5G48740 8150 -9107
AT1G07550 9441 -7217
AT1G07560 4715 -9160
AT5G59650 6718 -6009
AT5G59660 6417 -6217
AT2G14510 8903 -3805
AT3G46410 4848 -5202
AT5G59670 2661 -6947
AT4G29990 465 -3472

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G07560 -9160 209 -8112 4715 -9953
AT5G48740 -9107 2063 -2740 8150 777
AT5G59680 7574 3975 5327 8356 -3576
AT2G37050 7168 6120 7763 8828 317
AT1G07550 -7217 -1924 -4116 9441 -5610
AT5G59670 -6947 -800 1087 2661 925
AT4G29450 6810 4501 9269 5068 8099
AT5G59660 -6217 3505 -1512 6417 3231
AT5G59650 -6009 6631 7269 6718 -847
AT3G46410 -5202 261 7308 4848 6759
AT2G14510 -3805 -2311 -3259 8903 -9102
AT4G29990 -3472 -2993 -6897 465 -580
AT1G51620 3023 -6615 -2398 -3535 3745
AT3G21340 679 5698 2598 7437 7265





PROTEIN_SYNTHESIS_ELONGATION

PROTEIN_SYNTHESIS_ELONGATION
metric value
setSize 15
pMANOVA 0.00116
p.adjustMANOVA 0.00427
s.dist 0.667
s.de0 0.544
s.de3 0.1
s.de6 0.316
s.de12 -0.0643
s.de24 -0.186
p.de0 0.000261
p.de3 0.503
p.de6 0.0341
p.de12 0.667
p.de24 0.213




Top 20 genes
Gene de0 de6
AT5G19510 9877 9969
AT1G57720 9982 9846
AT1G30230 9705 9933
AT1G09640 9703 7983
AT2G18110 8272 8800
AT3G08740 7939 8996
AT4G26310 8507 6621
AT4G10480 8251 5147

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G57720 9982 9981 9846 6285 1718
AT5G19510 9877 6190 9969 3799 -4341
AT1G30230 9705 8050 9933 3653 638
AT1G09640 9703 6924 7983 6546 -203
AT2G31060 9020 -3009 -923 -4027 -8770
AT4G26310 8507 2329 6621 -2110 622
AT2G18110 8272 2196 8800 -2942 6032
AT4G10480 8251 -4204 5147 -1270 -5464
AT3G08740 7939 5050 8996 -536 -7260
AT3G22980 6074 -5287 -5711 -7038 573
AT3G12390 -5340 -7986 -4443 -7314 -6810
AT5G12110 -2300 3977 -5583 -4262 -1999
AT5G13650 1336 -1318 -1567 -9369 -9005
AT3G12915 1204 2945 -108 3989 -4554
AT5G10630 -824 -3568 -2960 -3594 -4796





CELL_CYCLE

CELL_CYCLE
metric value
setSize 15
pMANOVA 0.0706
p.adjustMANOVA 0.108
s.dist 0.662
s.de0 -0.301
s.de3 -0.447
s.de6 -0.282
s.de12 -0.182
s.de24 -0.19
p.de0 0.0438
p.de3 0.00275
p.de6 0.0585
p.de12 0.221
p.de24 0.202




Top 20 genes
Gene de3 de0
AT1G17130 -9473 -9790
AT5G45190 -9300 -9685
AT1G70620 -8267 -9985
AT3G19650 -9321 -8368
AT1G25682 -8981 -6699
AT5G41770 -8984 -6667
AT3G51110 -8316 -4267
AT4G30820 -6781 -3749
AT5G45990 -3239 -6234
AT3G05327 -3367 -350

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G70620 -9985 -8267 -9287 -9192 -10791
AT1G17130 -9790 -9473 -8573 -10013 -1827
AT5G45190 -9685 -9300 -8318 -10167 -9129
AT3G19650 -8368 -9321 -7043 -10362 -7874
AT5G48630 7463 5475 6896 6644 -4349
AT5G26850 6951 8670 8990 4378 3897
AT1G25682 -6699 -8981 -9891 -9171 1725
AT5G41770 -6667 -8984 -5921 2371 -2075
AT5G45990 -6234 -3239 -8543 7684 -10002
AT3G10530 5402 -6440 -4247 -4693 -7655
AT2G41830 -4589 2954 5289 -2394 5155
AT3G51110 -4267 -8316 -4190 -4428 -8378
AT4G30820 -3749 -6781 -1091 318 -2448
AT5G21080 3605 4617 8526 7862 6902
AT3G05327 -350 -3367 -7450 -4969 2566





CELL_DIVISION

CELL_DIVISION
metric value
setSize 27
pMANOVA 0.00356
p.adjustMANOVA 0.0104
s.dist 0.658
s.de0 -0.357
s.de3 -0.362
s.de6 -0.23
s.de12 -0.212
s.de24 -0.278
p.de0 0.00131
p.de3 0.00115
p.de6 0.0387
p.de12 0.0568
p.de24 0.0124




Top 20 genes
Gene de3 de0
AT1G05910 -7175 -9809
AT5G42140 -6058 -9923
AT5G16040 -8212 -6184
AT1G19880 -8566 -5880
AT5G48330 -6605 -5843
AT5G19420 -4126 -8133
AT5G06110 -8649 -3386
AT3G02300 -3278 -7278
AT5G08710 -2564 -9236
AT3G55580 -2253 -9707
AT3G02510 -7072 -3080
AT3G53830 -1897 -9601
AT3G01800 -4140 -4280
AT5G12350 -4762 -3562
AT3G03790 -4685 -3506
AT3G26100 -3973 -3702
AT1G10740 -6980 -1537
AT3G11450 -8961 -628
AT1G69710 -6653 -157
AT1G65920 -439 -1160

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G42140 -9923 -6058 -9061 -5754 -8975
AT1G05910 -9809 -7175 -8557 -9021 -10181
AT3G55580 -9707 -2253 -3336 -418 4109
AT3G53830 -9601 -1897 -5379 -6694 -2609
AT5G08710 -9236 -2564 -7525 -3559 -5875
AT5G19420 -8133 -4126 -6064 -4757 -1003
AT3G02300 -7278 -3278 89 5312 -3867
AT5G16040 -6184 -8212 -6728 -8387 -10288
AT1G19880 -5880 -8566 719 1802 -4398
AT5G48330 -5843 -6605 -7018 1077 -4484
AT1G63110 5199 10098 8963 9122 894
AT3G01800 -4280 -4140 -5318 -7386 -5673
AT3G26100 -3702 -3973 2648 -1249 -4288
AT5G12350 -3562 -4762 -4603 -2166 -4301
AT3G03790 -3506 -4685 -7745 -8622 3135
AT5G06110 -3386 -8649 -9402 -10585 -7979
AT3G02510 -3080 -7072 983 -4264 -9877
AT1G27060 1637 4142 -1439 -1672 -8451
AT1G10740 -1537 -6980 -1041 -1166 333
AT1G65920 -1160 -439 -6234 -4660 -3405
AT1G12730 -1069 3068 6467 125 -10318
AT3G11450 -628 -8961 -8490 -10476 -8023
AT1G66510 441 -933 778 3035 5546
AT5G60870 171 2248 4152 -1712 -5282
AT1G69710 -157 -6653 -3573 -8806 6343
AT3G15430 154 4329 5499 5573 3199
AT5G11580 120 -1962 4805 2250 -7938





SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VIII_VIII-2

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VIII_VIII-2
metric value
setSize 10
pMANOVA 0.0322
p.adjustMANOVA 0.0612
s.dist 0.656
s.de0 -0.232
s.de3 -0.336
s.de6 -0.258
s.de12 0.164
s.de24 -0.412
p.de0 0.204
p.de3 0.0659
p.de6 0.157
p.de12 0.369
p.de24 0.0239




Top 20 genes
Gene de24 de3
AT1G56120 -10708 -7888
AT1G53440 -10997 -6833
AT1G53430 -10894 -6780
AT1G56145 -7546 -4682
AT3G09010 -3896 -7791
AT1G07650 -5709 -1446
AT1G56140 -5901 -64

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G07650 -8734 -1446 -1145 2931 -5709
AT1G56120 -7794 -7888 -2779 -3634 -10708
AT1G53440 -7739 -6833 -9876 -4092 -10997
AT1G56130 6823 1022 -9947 4614 -10839
AT1G53430 -5518 -6780 -9054 -6176 -10894
AT1G56145 -2812 -4682 -3667 352 -7546
AT3G09010 -2792 -7791 -6222 2215 -3896
AT1G56140 2579 -64 -3087 7748 -5901
AT1G29730 2158 4264 8323 7905 6592
AT1G29740 -539 900 9964 -879 7854





TRANSPORT_MISC

TRANSPORT_MISC
metric value
setSize 32
pMANOVA 0.00506
p.adjustMANOVA 0.0135
s.dist 0.612
s.de0 0.227
s.de3 0.338
s.de6 0.222
s.de12 0.279
s.de24 0.286
p.de0 0.0263
p.de3 0.000942
p.de6 0.0295
p.de12 0.00637
p.de24 0.00505




Top 20 genes
Gene de3 de24
AT1G29310 10283 7653
AT5G18970 10303 7081
AT5G46530 9185 6065
AT5G63060 7166 5870
AT5G54750 5493 7409
AT5G25050 9965 4051
AT1G69460 4999 7764
AT1G29520 7710 4566
AT1G09580 5695 6074
AT4G38640 9097 3170
AT5G25040 7582 3582
AT1G16360 2591 5000
AT1G04570 1442 8513
AT1G11180 1252 2325
AT2G33280 6360 406

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G21900 9574 -1208 553 1218 6421
AT5G54860 8893 -3094 3889 -2879 6683
AT1G09580 8734 5695 8287 -3655 6074
AT4G38640 8131 9097 6842 302 3170
AT5G54750 8096 5493 9323 4532 7409
AT5G60800 -8192 -9005 -8922 -7161 -2054
AT1G04570 8017 1442 -7798 -4076 8513
AT1G29310 7934 10283 9535 7872 7653
AT1G25500 6499 8248 8788 8627 -5872
AT1G79710 6365 -1108 5779 4467 3409
AT1G69460 6334 4999 7719 5732 7764
AT5G18970 -6190 10303 678 7449 7081
AT5G58030 5911 -704 6243 -1931 59
AT4G21910 -5780 9779 -2783 6904 -894
AT5G46530 -5300 9185 2775 8711 6065
AT3G52640 -5069 6386 657 -43 -709
AT5G10190 5024 6911 3002 1327 -5086
AT1G11180 4473 1252 -510 -2554 2325
AT2G32040 -4303 193 1302 -558 -10648
AT1G64890 3688 8699 7773 5558 -2382
AT5G25040 3355 7582 4758 5404 3582
AT1G14010 3345 -4164 -1388 -4553 7070
AT2G21520 -3272 -7718 -7508 -6890 -134
AT5G63060 3162 7166 5199 -3051 5870
AT1G29520 -3119 7710 6282 8483 4566
AT2G33280 2929 6360 -7297 3624 406
AT2G04066 -2828 -835 -584 403 -10732
AT1G16360 1766 2591 -2251 6743 5000
AT5G25050 1717 9965 8777 9311 4051
AT4G21903 1246 8566 -4617 8008 -6558
AT4G36790 -648 8444 4885 7006 -3381
AT1G26690 224 -4037 -1650 -2083 5179





MISC_INVERTASE/PECTIN_METHYLESTERASE_INHIBITOR_FAMILY_PROTEIN

MISC_INVERTASE/PECTIN_METHYLESTERASE_INHIBITOR_FAMILY_PROTEIN
metric value
setSize 12
pMANOVA 5.01e-05
p.adjustMANOVA 0.000276
s.dist 0.599
s.de0 -0.189
s.de3 0.416
s.de6 0.293
s.de12 -0.248
s.de24 -0.0515
p.de0 0.257
p.de3 0.0127
p.de6 0.0788
p.de12 0.137
p.de24 0.757




Top 20 genes
Gene de3 de6
AT5G51520 8341 9262
AT5G62340 7057 9113
AT3G47670 9804 5657
AT1G23205 5977 6411
AT1G14890 3622 5433
AT5G38610 2530 5881
AT5G62350 10039 518

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G14890 9955 3622 5433 -9576 -5352
AT3G62820 -8983 6113 -4521 -2040 -1925
AT2G01610 -7971 885 -3517 2775 -3643
AT3G49330 -6676 7670 -4165 -6189 -3378
AT5G20740 -6212 -5798 3532 -4370 -10802
AT5G62360 -5687 -57 419 -3497 -7913
AT5G51520 5079 8341 9262 570 8916
AT1G23205 -3422 5977 6411 -9081 -2934
AT5G62350 -3139 10039 518 -10004 -6428
AT3G47670 2685 9804 5657 -2489 5109
AT5G62340 2314 7057 9113 -386 6463
AT5G38610 -1945 2530 5881 7433 3310





RNA_REGULATION_OF_TRANSCRIPTION_MYB_DOMAIN_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_MYB_DOMAIN_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 10
pMANOVA 0.189
p.adjustMANOVA 0.249
s.dist 0.586
s.de0 -0.254
s.de3 -0.45
s.de6 -0.219
s.de12 -0.168
s.de24 -0.00479
p.de0 0.164
p.de3 0.0137
p.de6 0.231
p.de12 0.357
p.de24 0.979




Top 20 genes
Gene de3 de0
AT5G41020 -9636 -9775
AT2G03470 -8159 -5123
AT1G26580 -5943 -6063
AT1G58220 -1769 -6137
AT3G52250 -2584 -3964
AT1G13880 -5354 -1453
AT1G09710 -727 -6653

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G41020 -9775 -9636 -8075 -10631 -5775
AT1G09710 -6653 -727 -2586 2374 -10183
AT2G30380 6487 7434 8974 9168 8260
AT1G58220 -6137 -1769 -7786 -8969 -5147
AT1G26580 -6063 -5943 1363 1936 -751
AT3G27220 5890 -6553 779 -1586 7991
AT2G03470 -5123 -8159 -9176 -8932 -363
AT3G52250 -3964 -2584 -4586 5437 -5625
AT1G13880 -1453 -5354 1677 -1547 1432
AT2G02060 193 -7587 -4057 -9901 -584





SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III
metric value
setSize 31
pMANOVA 4.53e-08
p.adjustMANOVA 4.48e-07
s.dist 0.582
s.de0 -0.32
s.de3 0.239
s.de6 0.271
s.de12 0.297
s.de24 0.13
p.de0 0.00203
p.de3 0.0214
p.de6 0.00902
p.de12 0.00417
p.de24 0.209




Top 20 genes
Gene de0 de12
AT2G15300 -8596 9324
AT5G24100 -7972 8435
AT2G23300 -6978 7313
AT2G26730 -6369 6566
AT1G64210 -8012 4546
AT5G05160 -6186 5664
AT5G58300 -8980 3438
AT5G10020 -4608 6392
AT5G43020 -6025 3787
AT1G67510 -7116 3141
AT3G08680 -8151 2450
AT5G61570 -6386 2945
AT4G20940 -3990 3920

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G53320 -9787 -8277 -6335 -9042 -6705
AT5G58300 -8980 6820 -2639 3438 -2534
AT2G15300 -8596 2892 1640 9324 7920
AT4G37250 8189 9589 9000 5390 -5084
AT3G08680 -8151 -2308 4512 2450 -5449
AT1G64210 -8012 -590 -9041 4546 -4255
AT5G24100 -7972 574 7623 8435 7123
AT1G10850 -7614 -857 6451 -4477 6678
AT1G67510 -7116 5359 3411 3141 -3055
AT2G23300 -6978 3145 1511 7313 3703
AT1G68400 -6973 787 2005 -665 -10031
AT3G50230 -6704 588 5247 -3446 6770
AT4G34220 -6466 2898 -4959 -4805 -9906
AT2G42290 6369 507 352 46 -3597
AT5G61570 -6386 1167 -1827 2945 4908
AT2G26730 -6369 7703 4770 6566 2684
AT5G05160 -6186 7457 2065 5664 1546
AT3G02880 5972 7732 6582 8319 7779
AT5G43020 -6025 -4455 9407 3787 -10005
AT4G23740 5942 8847 2269 6354 969
AT3G57830 -5259 -897 3586 -6298 -8726
AT5G67200 -5010 -2143 -1895 -1927 1268
AT5G10020 -4608 7706 9572 6392 5006
AT1G25320 4550 9502 9730 7291 -518
AT1G60630 -4170 1293 6957 -1656 2629
AT4G20940 -3990 7739 3725 3920 -3686
AT2G27060 2256 9437 5071 4454 -2215
AT5G07620 2003 6238 6279 6195 5170
AT5G41680 1725 -6711 -4225 -3135 3782
AT1G66830 650 -535 -8764 -3259 8267
AT4G31250 564 8307 8801 8583 8636





PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_METHYLOTRANSFERASES

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_METHYLOTRANSFERASES
metric value
setSize 13
pMANOVA 0.0066
p.adjustMANOVA 0.0172
s.dist 0.579
s.de0 0.219
s.de3 -0.0751
s.de6 0.147
s.de12 -0.147
s.de24 -0.488
p.de0 0.172
p.de3 0.639
p.de6 0.359
p.de12 0.358
p.de24 0.0023




Top 20 genes
Gene de24 de0
AT1G50000 -6791 7868
AT3G27180 -10880 4856
AT2G39670 -9559 4051
AT3G28460 -4343 8138
AT4G26600 -9585 2762
AT5G50110 -2858 3615
AT5G10620 -8787 333
AT3G19630 -5908 418
AT5G01230 -211 8093

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G28460 8138 4676 9166 2827 -4343
AT5G01230 8093 9229 9309 4984 -211
AT1G50000 7868 -322 5500 8015 -6791
AT4G25730 -6455 -9387 -7204 -10673 -9600
AT3G27180 4856 5952 8053 1661 -10880
AT2G39670 4051 -293 2272 -3437 -9559
AT5G50110 3615 -2015 375 -578 -2858
AT5G40530 -2874 -5656 -7185 -7743 -2769
AT4G26600 2762 -7254 -6903 -9281 -9585
AT1G60230 -1795 7320 5858 -2681 -6526
AT5G10605 -1300 -5004 -1945 -5536 192
AT3G19630 418 -3004 -7276 -8367 -5908
AT5G10620 333 2000 7600 4126 -8787





STRESS_ABIOTIC_HEAT

STRESS_ABIOTIC_HEAT
metric value
setSize 76
pMANOVA 5.96e-07
p.adjustMANOVA 4.92e-06
s.dist 0.564
s.de0 -0.15
s.de3 -0.342
s.de6 -0.207
s.de12 -0.359
s.de24 -0.0814
p.de0 0.024
p.de3 2.47e-07
p.de6 0.00178
p.de12 6.4e-08
p.de24 0.22




Top 20 genes
Gene de12 de3
AT5G22080 -10509 -9602
AT1G65280 -9736 -9518
AT4G07990 -9974 -9042
AT4G28480 -10234 -8739
AT2G20560 -9296 -9105
AT4G39960 -8913 -9305
AT2G35540 -8973 -9211
AT1G72070 -9386 -8665
AT3G10680 -9062 -8740
AT4G32208 -7966 -9316
AT2G21510 -8249 -7659
AT1G44160 -7149 -8646
AT5G59610 -8478 -6689
AT4G16660 -5755 -8399
AT5G06410 -8430 -5688
AT5G27240 -7531 -6153
AT1G80030 -9858 -4693
AT5G20970 -6769 -6686
AT3G08910 -6632 -6574
AT3G06340 -7089 -6047

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G20970 -9987 -6686 -9263 -6769 3314
AT2G42750 -9896 -4680 -8381 -6811 5657
AT3G14200 -9492 -4779 -9597 -8082 -4429
AT3G22530 9238 3867 4539 480 8887
AT3G10680 -9219 -8740 -5513 -9062 -6617
AT4G39960 -8871 -9305 -5839 -8913 -10709
AT2G35540 -8523 -9211 -6955 -8973 -6135
AT5G18750 -8424 -4222 -7728 165 -10547
AT2G21510 8298 -7659 -7752 -8249 3557
AT4G07990 -8395 -9042 -9909 -9974 -5986
AT1G72416 -8244 1393 49 -4706 -5490
AT3G06340 -7995 -6047 -7072 -7089 -8369
AT3G62570 7780 6990 7926 5494 7019
AT4G37480 7732 -1527 5488 236 -5002
AT3G05345 -7797 1229 -9620 -8999 1722
AT4G29920 -7773 -489 -2144 2796 -89
AT2G05250 7692 4380 -2636 -3172 3654
AT5G53150 -7708 -8198 -1485 -300 -4557
AT1G62970 -7635 6 -1464 -10161 -6372
AT3G47940 7531 -4744 3683 581 7568
AT4G28480 -7397 -8739 -9602 -10234 7440
AT5G23590 7152 -7484 4940 -2242 -274
AT2G01710 -7072 -6385 -8263 -4189 1836
AT4G10130 6967 6882 7950 9120 -892
AT5G22080 -6805 -9602 -7557 -10509 -5273
AT5G49580 -6723 -5750 -6504 447 857
AT1G44160 -6616 -8646 -1490 -7149 -9555
AT2G20560 -6567 -9105 -10241 -9296 -2494
AT5G05750 6418 -2191 1523 -5510 2538
AT3G57340 6157 596 1140 -7706 4145
AT5G03030 6136 -3421 -5983 -1680 6572
AT2G27140 -5858 -1358 -8826 -8353 4162
AT3G08910 -5418 -6574 -2456 -6632 -1004
AT5G59610 -5106 -6689 -6239 -8478 4229
AT1G79030 -4940 7767 -1711 8507 306
AT3G62190 -4915 -6122 -2059 -6382 -3656
AT5G06410 4737 -5688 -1242 -8430 -6633
AT3G04980 -4595 -6800 -5314 -5660 -7046
AT5G37380 -4055 -6907 -6965 -5694 -3756
AT1G80030 -4042 -4693 -2480 -9858 -3785
AT1G21080 -3953 -3376 -6003 -4987 7084
AT3G13310 3899 353 1292 -3219 -5789
AT2G41000 -3941 -3845 -9446 -5574 3728
AT1G02650 3862 -947 819 3465 -9957
AT2G33735 3824 380 6795 1414 -2717
AT4G39150 3644 -3261 -267 -7350 5148
AT3G12170 -3505 -4385 3588 985 -7439
AT2G17880 3218 3857 5841 -5423 -9598
AT5G64360 -3227 -7404 2362 -692 -7949
AT2G42080 -3151 -1352 492 -1671 2095
AT5G16650 3117 2060 -6281 -7664 -7813
AT4G16660 -2877 -8399 -6005 -5755 -1877
AT3G58020 2494 -3975 -4220 -6673 -3536
AT5G18140 -2468 4656 1751 -10082 -679
AT5G01390 -2370 -6224 -5814 -1501 -185
AT5G09540 2326 5031 -504 -2239 -7335
AT2G47440 -2265 8988 3056 -3154 -9871
AT2G25560 2106 -864 -5840 -6509 -8412
AT1G65280 -2026 -9518 -7347 -9736 691
AT1G18700 -1898 -3065 -4335 -2217 -8112
AT1G79920 1866 -3282 -1144 -1695 -5851
AT1G59725 -1681 1954 6563 2404 7774
AT4G02100 1677 8449 8009 2930 513
AT2G05230 -1476 -2905 1295 -1526 -781
AT4G16540 1394 -3139 -1857 -5490 -2417
AT2G20550 -1342 2448 5152 629 4543
AT1G10350 -1324 -5410 -140 -5252 7065
AT1G16680 -1148 -4108 -2643 -13 -2095
AT5G47590 -1021 -8088 1409 -4464 -5292
AT2G18465 985 -1321 -1230 917 2659
AT1G72070 -652 -8665 -4133 -9386 3989
AT3G17830 -494 -1489 4358 2589 -10101
AT1G77020 -427 7442 5496 -5640 -267
AT1G56300 -316 -3513 -456 -8424 -10483
AT4G32208 -202 -9316 -5875 -7966 -6910
AT5G27240 127 -6153 -8887 -7531 -5028





PROTEIN_DEGRADATION_ASPARTATE_PROTEASE

PROTEIN_DEGRADATION_ASPARTATE_PROTEASE
metric value
setSize 21
pMANOVA 0.0264
p.adjustMANOVA 0.0545
s.dist 0.555
s.de0 0.149
s.de3 0.396
s.de6 0.328
s.de12 0.0858
s.de24 0.117
p.de0 0.238
p.de3 0.00166
p.de6 0.00923
p.de12 0.496
p.de24 0.352




Top 20 genes
Gene de3 de6
AT3G51340 8118 9528
AT2G36670 8424 8335
AT5G36260 6610 9203
AT1G25510 7522 7428
AT3G51330 6672 7927
AT5G04710 8719 5859
AT1G05840 6317 7559
AT3G02740 7676 5439
AT1G77480 10013 3759
AT5G10080 4364 4803
AT3G51360 2843 5818
AT2G03200 9963 1577
AT3G51350 5972 1192
AT1G79720 3859 1275
AT4G16563 242 4808

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G66180 -9697 -3901 5000 -1480 -7273
AT1G77480 7875 10013 3759 242 -80
AT1G05840 7838 6317 7559 -2789 1155
AT1G03230 7211 1133 -5919 -7978 -3276
AT5G60160 7204 6457 -4035 -7116 5009
AT1G03220 6875 -8165 -6775 -9275 -5883
AT4G16563 -6907 242 4808 -10329 -8577
AT4G35880 -6502 -326 -685 -4629 328
AT3G51360 -6428 2843 5818 -3600 -373
AT2G36670 5325 8424 8335 7204 2872
AT3G02740 4931 7676 5439 3810 -255
AT3G51340 4715 8118 9528 8041 8274
AT3G51330 3889 6672 7927 8765 4548
AT5G04710 3703 8719 5859 -3969 -7943
AT5G36260 -2727 6610 9203 9199 8667
AT2G03200 2215 9963 1577 9238 1995
AT1G79720 -1697 3859 1275 2961 -4860
AT1G25510 1307 7522 7428 4224 5953
AT3G51350 1136 5972 1192 8897 6273
AT5G10080 -800 4364 4803 -1254 -7098
AT2G39710 349 1670 -5123 -3723 3922





PROTEIN_DEGRADATION_UBIQUITIN

PROTEIN_DEGRADATION_UBIQUITIN
metric value
setSize 22
pMANOVA 0.0572
p.adjustMANOVA 0.096
s.dist 0.551
s.de0 -0.2
s.de3 -0.322
s.de6 -0.287
s.de12 -0.0879
s.de24 -0.264
p.de0 0.104
p.de3 0.00885
p.de6 0.0199
p.de12 0.476
p.de24 0.0322




Top 20 genes
Gene de3 de6
AT2G26920 -8645 -9777
AT4G38930 -7911 -9849
AT5G12120 -8401 -8262
AT1G04850 -8975 -7083
AT3G21660 -6543 -8226
AT3G47890 -6402 -7465
AT2G29070 -6532 -5966
AT2G12550 -7613 -4196
AT1G65110 -4832 -2158
AT5G61940 -2656 -3100
AT1G52450 -2889 -1729
AT5G61950 -1842 -585
AT1G43690 -144 -697

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G47890 -8205 -6402 -7465 -3157 -8620
AT4G38930 -8132 -7911 -9849 -9218 -2879
AT2G33000 6292 1766 -2568 -3475 4841
AT2G26920 -5488 -8645 -9777 -10274 814
AT4G22290 -5408 525 1747 4957 -3679
AT1G65120 -5329 -121 3830 7043 -8598
AT2G27650 5125 6184 276 6922 -9657
AT1G52450 -4369 -2889 -1729 6752 -9683
AT1G27750 -4344 158 -676 -3198 -6252
AT1G04850 -3980 -8975 -7083 -9948 2691
AT1G65110 -3921 -4832 -2158 6701 -7166
AT1G53025 -3831 2827 -3691 -2275 -5850
AT1G52430 -3701 2959 2418 1868 -5485
AT5G51530 -3545 -5264 823 415 -3332
AT1G65130 3424 2927 125 5278 -10090
AT2G12550 3311 -7613 -4196 -4764 3791
AT2G29070 -3129 -6532 -5966 -10067 -166
AT5G61940 2651 -2656 -3100 -3070 -10827
AT5G12120 -1723 -8401 -8262 -10431 -2007
AT1G43690 -964 -144 -697 8095 2720
AT3G21660 -771 -6543 -8226 -9809 8167
AT5G61950 -418 -1842 -585 -281 -10066





SIGNALLING_RECEPTOR_KINASES_CATHARANTHUS_ROSEUS-LIKE_RLK1

SIGNALLING_RECEPTOR_KINASES_CATHARANTHUS_ROSEUS-LIKE_RLK1
metric value
setSize 10
pMANOVA 0.0558
p.adjustMANOVA 0.0952
s.dist 0.547
s.de0 -0.291
s.de3 -0.00233
s.de6 -0.0699
s.de12 0.426
s.de24 -0.167
p.de0 0.111
p.de3 0.99
p.de6 0.702
p.de12 0.0197
p.de24 0.36




Top 20 genes
Gene de12 de0
AT5G39000 7317 -6049
AT5G39030 4873 -7569
AT5G39020 6340 -5413
AT5G59700 5797 -2528
AT5G24010 2493 -4539
AT4G39110 721 -4483
AT5G38990 1220 -2338
AT2G39360 3066 -839

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G39030 -7569 -6070 -1036 4873 -6765
AT5G39000 -6049 6339 3444 7317 -8979
AT5G39020 -5413 -5863 -4826 6340 -10431
AT5G24010 -4539 6002 -1981 2493 -10386
AT4G39110 -4483 -2290 -4642 721 -3881
AT5G59700 -2528 3007 -7613 5797 753
AT5G38990 -2338 -3399 279 1220 2861
AT2G23200 1908 -1175 -964 811 -441
AT5G61350 1484 7943 7842 4870 7456
AT2G39360 -839 -10 1088 3066 2621





PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VII

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VII
metric value
setSize 10
pMANOVA 0.0467
p.adjustMANOVA 0.084
s.dist 0.54
s.de0 -0.249
s.de3 -0.182
s.de6 -0.319
s.de12 0.28
s.de24 0.127
p.de0 0.173
p.de3 0.319
p.de6 0.0805
p.de12 0.126
p.de24 0.488




Top 20 genes
Gene de6 de12
AT3G28690 -6156 9482
AT2G39110 -9142 1227
AT1G72540 -10267 865
AT2G28940 -900 8810

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G72540 -10101 -9189 -10267 865 -7069
AT1G74490 8551 2813 8224 7348 7488
AT1G76360 -8195 -7407 -8961 -699 -6960
AT5G35580 -6661 -4614 -9945 -6957 4974
AT1G61860 5526 1520 5562 5920 7124
AT2G39110 -5383 5850 -9142 1227 5414
AT1G07870 -4973 -8411 -8884 -7085 -653
AT2G28940 -4699 -2959 -900 8810 -4295
AT3G28690 -1264 3446 -6156 9482 -3950
AT3G01300 1104 5220 6810 3786 497





PROTEIN_AA_ACTIVATION_PSEUDOURIDYLATE_SYNTHASE

PROTEIN_AA_ACTIVATION_PSEUDOURIDYLATE_SYNTHASE
metric value
setSize 15
pMANOVA 0.0105
p.adjustMANOVA 0.0248
s.dist 0.536
s.de0 0.248
s.de3 0.059
s.de6 0.221
s.de12 0.0567
s.de24 -0.412
p.de0 0.0964
p.de3 0.693
p.de6 0.138
p.de12 0.704
p.de24 0.00574




Top 20 genes
Gene de24 de0
AT1G34150 -9396 6527
AT1G78910 -8934 4792
AT5G35400 -7480 4857
AT3G06950 -3919 6360
AT4G21770 -4814 4270
AT5G14460 -3580 4074
AT2G30320 -5344 1948
AT1G09800 -2112 3340
AT1G20370 -603 7257
AT5G51140 -8503 497
AT1G76120 -1088 2084

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G20370 7257 -3690 -787 -1900 -603
AT1G34150 6527 877 6920 7328 -9396
AT3G06950 6360 5899 1247 -1428 -3919
AT5G35400 4857 1190 5457 1177 -7480
AT1G76050 -4894 3899 -1139 -7359 -7284
AT1G78910 4792 -622 -1826 -7305 -8934
AT4G21770 4270 6978 7840 4129 -4814
AT5G14460 4074 -5641 5136 -5834 -3580
AT1G09800 3340 4573 6313 2477 -2112
AT3G52260 -2368 -1480 -4262 -79 -10430
AT1G56345 -2153 1050 -1957 6880 822
AT1G76120 2084 2105 -1704 6051 -1088
AT2G30320 1948 -4513 6064 -4733 -5344
AT5G51140 497 -51 -232 -5979 -8503
AT3G19440 -217 5461 4565 6763 -5300





SIGNALLING_RECEPTOR_KINASES_S-LOCUS_GLYCOPROTEIN_LIKE

SIGNALLING_RECEPTOR_KINASES_S-LOCUS_GLYCOPROTEIN_LIKE
metric value
setSize 16
pMANOVA 0.00309
p.adjustMANOVA 0.00928
s.dist 0.532
s.de0 -0.141
s.de3 -0.0344
s.de6 -0.23
s.de12 0.328
s.de24 -0.319
p.de0 0.329
p.de3 0.812
p.de6 0.112
p.de12 0.023
p.de24 0.027




Top 20 genes
Gene de12 de24
AT1G61490 7797 -10931
AT1G61500 8741 -8639
AT1G11280 8097 -9077
AT1G61400 7512 -9567
AT1G61430 7524 -9163
AT1G61480 7229 -9304
AT4G27290 9257 -2911
AT4G11900 3001 -3770

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G24080 10022 -6464 -9728 -10370 7975
AT1G11410 -9328 -6513 -9403 -5273 319
AT1G34300 8802 4023 2268 -2691 -4233
AT1G61500 -8739 2091 2072 8741 -8639
AT1G61480 -8532 -2417 -8166 7229 -9304
AT1G11280 -7753 1307 -3800 8097 -9077
AT1G61460 -5575 -3157 -5928 -2414 -7325
AT1G61400 4515 2888 -864 7512 -9567
AT4G11900 4458 -1269 -3554 3001 -3770
AT1G61440 -4363 -6351 -4499 -7352 -6045
AT4G27290 -4072 2663 2305 9257 -2911
AT1G61490 -2665 6075 7995 7797 -10931
AT1G61430 1534 -321 2643 7524 -9163
AT1G11300 -1319 -958 -5630 6249 3580
AT1G61550 -644 4599 -7796 9464 2207
AT1G61390 -553 5786 2755 -2581 -1286





STRESS_BIOTIC_PR-PROTEINS

STRESS_BIOTIC_PR-PROTEINS
metric value
setSize 105
pMANOVA 9.71e-23
p.adjustMANOVA 2.4e-21
s.dist 0.53
s.de0 -0.252
s.de3 -0.158
s.de6 -0.27
s.de12 0.339
s.de24 -0.0717
p.de0 7.99e-06
p.de3 0.00514
p.de6 1.74e-06
p.de12 2.02e-09
p.de24 0.205




Top 20 genes
Gene de12 de6
AT1G12290 9322 -8281
AT3G44630 8110 -8681
AT1G72940 6512 -9693
AT3G44400 7638 -8005
AT3G25510 6950 -8268
AT5G41540 7241 -6998
AT4G16920 7314 -6858
AT5G51630 8993 -5430
AT1G65850 7982 -6101
AT4G19920 7650 -6000
AT4G23510 5526 -8245
AT3G04220 6200 -6926
AT2G17060 6335 -6730
AT5G40910 6722 -5979
AT5G43740 8443 -4210
AT4G16960 6218 -5160
AT4G36140 7213 -4444
AT4G11170 3715 -8420
AT1G57650 3686 -8436
AT1G63360 5572 -5217

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G25510 -9425 -5335 -8268 6950 -8095
AT5G40100 9103 3850 7834 6940 3583
AT4G16920 -8673 -1085 -6858 7314 -3167
AT5G46500 -8366 -8292 -3084 1589 -6206
AT4G19060 -8322 -8842 -4584 -7994 -3523
AT5G46260 -8107 -5567 -3918 6307 -7581
AT5G40910 -8092 3287 -5979 6722 -2788
AT2G34930 7883 8612 -5097 -6872 8628
AT1G65850 -7810 3784 -6101 7982 -1053
AT3G04210 -7735 7893 -1066 2157 -9608
AT5G41540 -7722 -2534 -6998 7241 -2932
AT2G17050 -7652 -1388 -3196 8223 -8706
AT5G24200 -7462 -7550 -3933 -4891 155
AT1G61300 -7090 -7993 -1971 1599 -10683
AT1G31540 -7012 -6815 -8896 2619 -4256
AT1G63360 -7004 2841 -5217 5572 -9440
AT3G51560 -6986 -1610 1651 6737 -595
AT5G49140 -6958 -3257 -3683 4571 -5341
AT1G72860 -6895 1533 1026 8007 2472
AT5G46490 -6834 432 -4494 5338 -4582
AT5G66900 6689 4647 3803 6798 -4002
AT5G22690 -6716 -5119 -6258 2189 -8343
AT1G59780 -6645 7569 1244 9305 4015
AT5G43730 -6617 3498 -3746 7507 511
AT1G63870 -6598 -5181 -9387 1325 -6543
AT3G44400 -6574 -5259 -8005 7638 -5296
AT1G61190 -6180 -7497 -4683 -320 -10546
AT1G72920 -6167 -320 -9200 -2044 9036
AT1G50180 -6157 -1752 -4509 1959 3786
AT1G27180 -6151 5539 -5833 1026 -974
AT3G14460 5983 4701 -6908 -1110 2737
AT2G17060 -5972 1710 -6730 6335 -4060
AT1G63350 -5838 1188 -989 5122 -10049
AT1G72900 5750 -6008 -6622 -1208 -3801
AT3G51570 -5610 -713 -3147 5064 1645
AT5G23400 -5600 7045 763 72 5939
AT1G58400 5513 -2659 3573 8051 1818
AT5G05400 -5316 -2449 -4078 6010 -5411
AT2G17055 -5281 -3681 -1903 2335 -8799
AT3G44630 -5254 -4206 -8681 8110 -1934
AT5G51630 -5073 3566 -5430 8993 3171
AT5G46450 -5002 1844 -4371 -3504 -7863
AT4G14370 -4948 -8586 -9372 -7574 2499
AT1G17600 4911 -3206 5537 38 -6269
AT1G72910 -4930 6564 3022 3024 5552
AT1G12290 -4897 -5071 -8281 9322 -6468
AT1G52660 -4874 518 9627 8444 8701
AT5G45210 4779 3955 8312 8929 8959
AT1G61100 -4769 -8963 -9361 -9319 -8760
AT5G66910 4657 8327 5427 7776 4215
AT1G58602 -4652 -6371 -7180 -7383 -7491
AT5G63020 4572 2357 5572 3933 -3612
AT3G04220 4556 -1746 -6926 6200 3471
AT2G14080 -4578 -2638 529 -2896 -5786
AT4G23440 -4499 -6093 1253 2670 -2191
AT5G38340 -4252 -686 -352 5605 -1256
AT5G41740 -4247 -7753 -5650 -6525 3120
AT1G62630 -4203 3410 -791 4443 -1058
AT5G45200 -4117 -2171 7088 5077 8892
AT2G16870 -4107 -3152 -1225 6604 -6470
AT4G08450 -3886 -774 -2821 7423 -3592
AT1G72940 -3379 -1932 -9693 6512 8048
AT1G61180 -3377 -6388 -1125 6031 -7263
AT5G43740 -3347 -883 -4210 8443 -52
AT1G61310 -3282 -6445 -3935 7279 -8288
AT4G19920 -3057 5465 -6000 7650 -7805
AT4G19925 -3021 2182 -6659 1443 -6642
AT5G38850 2855 -716 -4684 -5837 -2502
AT1G69550 2812 -2671 -1447 2170 3392
AT1G56520 -2771 -6501 1757 2174 2447
AT5G45490 -2720 -7040 -1672 8407 8590
AT1G63740 2629 -2465 -6024 2038 2170
AT1G66090 2608 -6618 -3298 -7620 -3660
AT4G16960 -2511 -3804 -5160 6218 -7642
AT3G15700 -2426 412 -1662 3990 5757
AT4G13820 2357 2086 2189 4392 4737
AT4G11170 -2342 -7638 -8420 3715 -4209
AT5G41750 -2294 -7732 -6326 -5772 624
AT5G18360 -2082 1094 98 1901 -4824
AT5G48780 -2013 5297 -1610 8245 5132
AT1G63730 -1862 2347 -6469 3679 -5791
AT4G36150 1838 -5958 -7604 2819 -881
AT2G28670 -1618 6522 9605 9493 8791
AT5G38350 1542 4632 1863 7560 3584
AT5G17680 -1522 310 1967 2458 2543
AT1G57650 -1493 -4765 -8436 3686 -10012
AT1G72870 -1389 5954 -2757 4574 5761
AT5G47250 -1362 6947 1678 5462 898
AT5G58120 -1143 -7090 -8255 -5651 -4383
AT5G41550 -1059 -4968 -3784 362 4826
AT4G19530 -999 694 -1913 -7144 -10534
AT5G45440 975 -7588 1850 2959 8118
AT4G23510 920 3394 -8245 5526 -2800
AT1G72950 838 3629 3033 4511 280
AT1G33590 773 3117 -4753 -8652 -1401
AT1G57630 696 -4637 -8891 -2066 -9054
AT1G72850 -689 -5127 -1029 -732 6254
AT5G11250 -579 3932 5873 -53 -9312
AT4G36140 -417 1205 -4444 7213 -2196
AT5G48770 -346 805 -4974 2662 1103
AT1G72890 294 -4032 -981 -4382 -9017
AT1G51480 -295 946 -6609 1507 922
AT4G19510 -289 -2095 -546 -352 -9184
AT1G56540 -198 -4691 -2551 4795 -5558
AT4G19520 184 -3283 -6039 -3749 -8339





CELL_WALL_DEGRADATION_PECTATE_LYASES_AND_POLYGALACTURONASES

CELL_WALL_DEGRADATION_PECTATE_LYASES_AND_POLYGALACTURONASES
metric value
setSize 53
pMANOVA 5.63e-05
p.adjustMANOVA 0.000293
s.dist 0.529
s.de0 0.151
s.de3 0.336
s.de6 0.328
s.de12 0.0771
s.de24 0.177
p.de0 0.0571
p.de3 2.33e-05
p.de6 3.63e-05
p.de12 0.332
p.de24 0.0261




Top 20 genes
Gene de3 de6
AT3G24670 10246 9589
AT2G43890 9793 9954
AT3G06770 10085 8919
AT2G43880 8787 9972
AT1G05660 9048 9643
AT3G59850 9136 8941
AT4G01890 9123 8184
AT3G07010 9733 7634
AT3G62110 9415 7608
AT1G67750 8882 7506
AT1G11920 6790 9463
AT5G49215 8936 7032
AT1G56710 7033 8649
AT3G57790 7733 7492
AT4G13710 8920 5245
AT1G04680 8266 5594
AT4G13210 5946 7122
AT4G23820 4996 8028
AT4G23500 8311 4821
AT1G05650 4071 8523

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G56710 9864 7033 8649 742 -2963
AT5G41870 -9954 1839 -7118 -9766 -7758
AT5G55720 -9833 -6659 -2337 6547 -2087
AT1G80170 -9512 -4426 -6507 -1520 -11080
AT4G01890 9355 9123 8184 7718 8314
AT1G65570 9121 7852 4253 6751 7017
AT3G24670 9011 10246 9589 8276 7844
AT3G53190 -8947 -1281 3466 -1719 -10374
AT3G09540 -8826 4877 -9180 -3500 -1996
AT1G70500 8117 -1385 -3476 -6713 -1747
AT3G27400 -7841 3852 -6806 -1518 2119
AT2G43880 7571 8787 9972 9031 8793
AT4G24430 7382 1284 -2153 -1906 811
AT1G23460 6781 -3185 -2496 -8791 -4994
AT2G22620 -6514 4225 311 7535 7357
AT5G14650 6372 -5225 7612 -1383 6424
AT2G43890 6338 9793 9954 6248 8216
AT3G61490 6333 -4818 -898 -9145 -2749
AT3G15720 6051 -4479 3273 -5394 -3684
AT4G23820 5885 4996 8028 -408 -10916
AT2G43870 5861 -2318 4408 -8675 8540
AT1G09890 5652 7978 2241 -956 5482
AT5G49215 5312 8936 7032 -84 -637
AT4G13210 5153 5946 7122 4118 -562
AT3G57790 5124 7733 7492 -2781 -2401
AT4G23500 4848 8311 4821 -3735 3092
AT5G04310 4773 -138 2891 131 -10994
AT1G04680 -4813 8266 5594 1645 6189
AT3G26610 -4347 1511 9347 6868 -6347
AT1G11920 4249 6790 9463 6201 8778
AT4G33440 3870 -2168 8381 -843 7146
AT4G24780 3745 10315 1229 5923 2788
AT3G42950 -3753 2199 -219 -1509 2371
AT1G09880 -3678 5272 2430 7769 692
AT3G62110 3503 9415 7608 9074 -956
AT1G05660 3060 9048 9643 -287 8674
AT5G48900 3054 5930 -1203 1982 7667
AT1G10640 -2951 -6648 -3427 -7123 -3972
AT4G13710 -2949 8920 5245 3882 4613
AT3G16850 -2884 3718 -2595 -4687 -10383
AT1G02460 2770 3276 8598 -6491 8579
AT3G06770 2670 10085 8919 370 -10428
AT3G55140 2630 7415 3773 4128 4300
AT1G19170 -2071 4722 1745 3308 -4880
AT1G09910 1979 -3088 -2511 -601 -5614
AT3G07010 1623 9733 7634 7985 -10581
AT4G37950 -1357 8270 836 6252 7222
AT1G60590 -1207 4920 1717 -7850 5483
AT1G05650 -1092 4071 8523 -2417 9061
AT1G48100 -1068 -5030 -7267 -7426 7351
AT5G63180 1003 1112 383 -2883 -5882
AT1G67750 719 8882 7506 3249 1164
AT3G59850 186 9136 8941 -4101 8193





RNA_RNA_BINDING

RNA_RNA_BINDING
metric value
setSize 89
pMANOVA 2.65e-11
p.adjustMANOVA 3.28e-10
s.dist 0.529
s.de0 -0.217
s.de3 -0.212
s.de6 -0.0352
s.de12 -0.223
s.de24 -0.371
p.de0 0.000405
p.de3 0.000551
p.de6 0.566
p.de12 0.000283
p.de24 1.45e-09




Top 20 genes
Gene de24 de12
AT2G21440 -10850 -10524
AT2G33435 -10783 -10346
AT5G09880 -10943 -9511
AT1G80930 -10623 -9726
AT5G55670 -10174 -10097
AT5G51410 -8928 -9298
AT1G70200 -8574 -9121
AT1G13190 -8755 -8740
AT3G52660 -10614 -6985
AT1G22910 -10810 -6677
AT3G04500 -7809 -9184
AT2G35410 -8268 -8636
AT5G40490 -10720 -6322
AT5G19960 -7514 -8313
AT3G13740 -9341 -6667
AT1G60000 -6215 -9584
AT1G03457 -9506 -6160
AT3G23900 -5984 -9646
AT5G10800 -7328 -7571
AT4G26480 -9640 -5456

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G22910 -10174 -5366 -9245 -6677 -10810
AT1G78260 -10093 2163 2629 -3398 1209
AT3G52660 -9943 -8884 -8220 -6985 -10614
AT5G09880 -9938 -9242 -8265 -9511 -10943
AT2G46780 -9900 -3771 -3054 -3857 1110
AT2G25970 -9658 -1669 -6529 -2158 -10728
AT2G17975 -9611 -3877 -6150 -2099 -5131
AT1G76460 -9575 1099 -2750 -2657 -7687
AT3G23900 -9547 -7905 -7832 -9646 -5984
AT5G28390 -9533 -6205 -8411 991 -9443
AT1G03457 -9460 -5294 -5881 -6160 -9506
AT5G51410 -9429 -8901 -6650 -9298 -8928
AT1G33470 -9426 5960 2263 2729 -9367
AT2G33435 -9364 -9552 -9289 -10346 -10783
AT1G20880 -9333 -1151 -3007 637 -1315
AT1G67325 -9309 -3998 -1635 -8183 -358
AT1G80930 -9290 -8696 -8408 -9726 -10623
AT3G04500 -9239 -6465 -8151 -9184 -7809
AT5G12190 8959 2714 2967 -9729 3453
AT1G75670 8938 2028 4161 7544 -2773
AT3G25470 8773 5017 9263 3202 1263
AT5G66010 -8816 -9098 -5735 -931 -8028
AT1G13190 -8679 -9261 -8829 -8740 -8755
AT4G26650 8562 6739 3642 1677 4037
AT5G55670 -8641 -9481 -6914 -10097 -10174
AT4G24420 8411 6268 9340 6384 2243
AT3G21215 -8445 2677 -7057 -3817 -5911
AT2G16940 -7651 -6410 455 -4301 -9244
AT3G59980 7416 2078 7932 -4963 -7076
AT5G10800 -7431 -7097 -4049 -7571 -7328
AT4G00420 7007 4082 865 -590 612
AT2G21440 -7038 -9269 -8323 -10524 -10850
AT3G08620 -7021 3190 1890 1554 -5138
AT3G13700 6942 10250 9710 -1577 -426
AT4G18375 -6540 196 -1258 6990 -760
AT2G35410 6375 7462 7954 -8636 -8268
AT3G09160 6279 1622 6016 -3926 -6833
AT5G40490 -6101 -8346 691 -6322 -10720
AT4G13860 -6016 4582 -6444 8065 -8750
AT5G04600 5698 -7686 -757 -3839 -4859
AT2G28540 -5718 -2072 -5540 -4612 -4651
AT5G46870 -4929 954 7557 3268 6854
AT3G01210 -4888 2911 -1914 -3428 2519
AT3G46020 -4879 -3891 3788 5309 -7608
AT3G27700 -4860 -5877 -9495 -9772 -5322
AT3G07810 -4555 -4813 -5466 8675 11
AT4G35785 -4548 -2406 802 -934 -5681
AT5G56140 4456 -1090 -767 -4080 -4170
AT5G59950 -4392 -8237 -1259 -9160 392
AT3G13224 -4359 -8410 2057 -3318 -7139
AT1G70650 -4190 -6159 -891 -8259 -6265
AT1G01080 4107 3461 3867 -5187 -6932
AT2G37510 4015 -194 6351 2317 -4647
AT4G20030 3986 6626 7731 6132 -2743
AT5G15270 -3911 2020 4264 6705 -4967
AT2G27330 3689 3548 9143 -1785 -2639
AT5G46190 -3743 862 1196 5005 -1765
AT3G13180 3627 6838 6186 4194 -8415
AT5G19030 3609 -239 5022 -6479 -8108
AT4G10110 -3594 3779 -287 -8419 -5579
AT3G20890 3308 -3944 1852 3446 1585
AT1G22330 -3294 2245 -4426 61 -10298
AT4G17720 3167 -8887 -8734 -9470 7152
AT4G09040 3140 5778 9010 3860 -7631
AT5G19960 -2854 -9050 -5863 -8313 -7514
AT4G11970 2723 2538 4839 3445 -3695
AT5G47620 2691 -6731 -998 -6622 4769
AT3G13740 2639 459 -46 -6667 -9341
AT1G60000 -2660 -1742 -2876 -9584 -6215
AT2G44710 -2403 -5993 1493 -4884 -3882
AT1G09660 -2007 2269 9055 7256 -7414
AT1G14340 1757 3810 -9151 -1258 -7437
AT3G20930 -1683 1777 -1618 -6430 -5765
AT3G08000 1612 5515 7258 -3306 -4342
AT3G21100 1604 -5327 -111 -2891 -3762
AT4G28990 -1585 -2898 3735 -8326 297
AT5G32450 -1315 2755 4736 -3894 -6611
AT3G12640 -1309 -4789 -7214 -8835 -3425
AT1G73490 -1218 5015 -2310 501 -8892
AT5G55550 -1052 1341 -3859 377 5325
AT4G26480 -978 -87 1884 -5456 -9640
AT1G67950 996 -1861 3984 -9529 3085
AT1G70200 -702 -8806 -2900 -9121 -8574
AT5G46840 567 -9527 -6664 -10142 -4901
AT4G36960 -514 -5682 13 757 -254
AT4G19610 434 -5475 -1594 4790 -9633
AT2G42240 -411 7934 5080 -2493 -1213
AT1G17640 -366 -1292 6908 4783 -2281
AT2G33410 206 -5709 5766 7480 -5030





NOT_ASSIGNED_NO_ONTOLOGY_PENTATRICOPEPTIDE_(PPR)_REPEAT-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_PENTATRICOPEPTIDE_(PPR)_REPEAT-CONTAINING_PROTEIN
metric value
setSize 206
pMANOVA 4.17e-47
p.adjustMANOVA 4.13e-45
s.dist 0.528
s.de0 0.124
s.de3 -0.0108
s.de6 0.166
s.de12 0.364
s.de24 -0.321
p.de0 0.00222
p.de3 0.789
p.de6 3.94e-05
p.de12 2.08e-19
p.de24 1.87e-15




Top 20 genes
Gene de12 de24
AT2G17525 9015 -10816
AT1G63150 8415 -9965
AT4G21880 7802 -10685
AT1G09900 7695 -10761
AT3G58590 8692 -9521
AT5G15280 9352 -8539
AT2G33680 8424 -9446
AT1G74630 7073 -10510
AT1G63330 8270 -8682
AT1G06710 8227 -8654
AT1G10910 6814 -10409
AT5G28460 7763 -8863
AT4G26800 6629 -9740
AT3G61520 8625 -7383
AT1G62914 7164 -8692
AT2G02150 8985 -6820
AT4G20740 8343 -7318
AT1G08610 5745 -10182
AT1G13040 5337 -10716
AT5G37130 5512 -10302

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G20720 -9811 -9208 -9298 -8628 -8658
AT1G63130 -9779 -5639 -4322 2214 -10996
AT2G30780 9618 4918 6476 6425 944
AT4G14190 9385 8946 7464 8255 3748
AT2G15980 -9409 -8080 -3652 -6671 -7223
AT5G39980 9146 7673 8715 254 -5019
AT2G17033 8956 7914 8548 7658 -3171
AT2G48000 -9047 -5369 -4470 3621 -1087
AT2G16880 -8922 -4892 -1760 1393 -715
AT5G13770 -8609 -7122 -6257 1805 7109
AT3G42630 8480 9790 7064 9042 -2674
AT2G17525 -8559 -3090 -3032 9015 -10816
AT5G37130 -8447 -3306 -1990 5512 -10302
AT3G02650 8282 7738 7057 9378 3109
AT1G09900 8264 10322 5635 7695 -10761
AT1G07740 8148 3281 6492 580 -3479
AT5G61370 8136 -4979 3254 -3521 -6843
AT1G01970 7987 9397 8506 3698 187
AT4G35850 7873 7184 4853 -277 -1767
AT2G27800 7849 3027 7697 7379 3790
AT3G13160 7754 3222 8879 6367 -2338
AT4G36680 7673 6512 4470 4753 -1282
AT1G63630 -7688 804 -1301 611 -3487
AT4G21880 -7634 -1771 -4957 7802 -10685
AT4G17616 7319 8135 1994 7692 6616
AT3G46870 7301 2851 6334 3430 -553
AT1G13040 -7342 -3186 4116 5337 -10716
AT1G71210 7281 -3253 1853 5096 -6418
AT5G59900 -7318 -4843 -3349 -4196 -2045
AT2G18520 7239 -1814 1235 7111 -1688
AT1G64580 7201 2987 7707 2424 -758
AT1G63330 -7105 -1506 -1003 8270 -8682
AT4G01570 -7040 -7219 -7759 -7007 -3467
AT5G18390 6879 4521 1878 8905 1505
AT4G11690 6867 -5018 6076 1401 -4404
AT1G22960 6849 648 1188 2893 1595
AT5G14770 -6900 -6278 -2460 -1187 -5371
AT3G14580 6825 4183 3617 1268 -6819
AT2G01740 6797 70 5072 6937 -7356
AT1G74580 -6814 -696 977 9183 -5369
AT1G23450 6745 -3862 4020 -2618 -9940
AT1G55890 6733 6529 5212 5302 -2151
AT3G53170 6562 -3938 3692 -3782 -7822
AT1G03560 -6622 -7820 -5984 1031 -4113
AT5G65820 -6611 -7033 -7627 2764 -4275
AT3G07290 6520 519 5325 5443 -1459
AT2G17670 6430 6003 1538 9050 586
AT3G04130 6287 1240 -1958 -658 -3924
AT1G06270 6267 2923 4851 5659 -1060
AT1G73400 6260 7448 3655 8242 4853
AT3G22470 6216 8379 8043 7772 6213
AT1G80550 6200 -6066 4466 2162 5904
AT3G06920 6153 3087 3140 3955 -9987
AT1G74630 6018 -772 5215 7073 -10510
AT2G06000 5959 7751 6571 6498 -4200
AT5G61400 5946 5110 9024 7177 484
AT1G16830 5916 7617 3113 8401 -2641
AT5G25630 -5881 -9127 -7178 -9712 -7483
AT5G66631 5741 1679 3999 3218 -7506
AT1G53330 5697 1460 3772 -497 -10221
AT3G25210 -5677 -2763 -1791 1301 -9215
AT2G18940 5582 -1452 5271 -25 -7199
AT3G18020 5546 -4480 -1933 -3397 -9162
AT1G11630 5538 5427 7163 3214 4056
AT4G30825 5529 8808 4850 9162 -1280
AT2G01390 5519 1821 5674 4131 -10366
AT3G46610 5503 -2821 7584 4478 -4875
AT5G48730 5470 5245 7180 313 -6537
AT5G18475 5410 2049 4307 3815 1656
AT3G49140 -5459 -7556 -9170 -7460 -10033
AT3G48250 5314 9890 6416 8005 -4873
AT4G19890 5287 1662 6152 4630 -4841
AT5G38730 5045 2589 7759 4711 -574
AT5G14080 5031 -2122 612 1208 -1531
AT1G68980 -5066 224 1354 2086 -5023
AT3G09060 -5023 -552 -1394 4438 -9890
AT4G04790 4971 4001 -520 -42 -3832
AT1G63150 -4920 926 -950 8415 -9965
AT3G54980 4750 3044 932 5555 -3447
AT5G12100 -4788 -5167 2987 2339 2690
AT3G13150 4728 9479 3994 6294 -7791
AT3G60050 4724 -300 4574 7667 1520
AT1G69290 4679 6470 -885 1823 -1220
AT5G46680 4638 2143 3167 -3188 -3918
AT1G62930 4508 -3355 1055 8709 1609
AT1G62350 4352 -1376 -1862 4918 -2362
AT5G11310 4299 -6065 -3616 -3261 -8815
AT1G64100 4291 5650 4481 -2112 -2571
AT1G79080 4187 -5042 3544 1256 -1224
AT3G62540 -4226 631 1234 -5630 -4766
AT2G15630 4166 4497 4624 5666 -3569
AT3G48810 -4209 -1645 5754 9221 -4258
AT1G02060 4137 -4398 2606 -6410 -10538
AT4G26680 -4197 270 2562 -652 -1979
AT3G04760 4091 4682 -185 12 -6884
AT1G11900 4086 1718 4188 -3206 7117
AT1G63070 -4040 537 -5930 2285 -9233
AT4G18975 -4011 -1117 -1162 4560 -8201
AT5G16420 3924 -3011 2220 741 -9278
AT5G15280 -3962 3439 3447 9352 -8539
AT5G02830 -3905 -924 -6535 -4747 -698
AT4G20740 3856 2563 5479 8343 -7318
AT1G11710 3729 933 389 7001 -1175
AT5G65560 3656 -2977 4267 8593 439
AT5G28460 -3686 -5115 3530 7763 -8863
AT1G73710 3554 -4570 -2523 -5179 -8997
AT1G63400 -3567 -3945 213 647 -8001
AT1G13410 3499 1251 5994 6823 -4781
AT1G13630 -3465 1906 -3348 5325 -9193
AT3G02490 3334 1808 2213 8330 -5535
AT1G04590 -3358 -8609 -5517 -9125 -8295
AT3G22690 3322 -1154 3652 3873 -8093
AT2G37230 3306 -5282 -96 2774 -5960
AT2G38420 3241 -3126 -145 3689 220
AT1G30290 3214 -4783 -3621 -2748 -3430
AT1G61690 -3229 -8983 -8980 -9282 -4140
AT5G15980 3171 5658 5561 9473 3365
AT4G38150 3133 3340 -3394 1243 -10602
AT3G61520 3090 7547 6408 8625 -7383
AT5G46100 3038 -749 5167 8458 -6706
AT1G26500 -2995 -5273 876 -3982 -1016
AT2G02150 -2960 -434 631 8985 -6820
AT5G02860 -2929 247 381 -3249 -10751
AT1G66345 -2920 -581 4156 3910 5099
AT1G12620 -2914 59 3464 2631 -5480
AT1G13800 2853 4007 -513 5168 -2423
AT2G40240 -2836 -5849 3441 567 -1342
AT5G18950 2786 1223 8370 7659 7344
AT1G06580 -2783 6353 -568 894 1316
AT4G19440 -2758 1997 -4023 6001 -7561
AT1G80880 2624 56 5375 -1627 -7709
AT1G08610 2611 -413 -2430 5745 -10182
AT5G61990 -2613 806 3869 9163 2573
AT5G01110 2567 -4739 1315 4975 1303
AT3G09040 -2545 -2570 -5338 4080 -6352
AT3G61170 2506 -930 6932 3359 -7727
AT5G24830 2446 3187 2561 5403 -6057
AT2G28050 2443 -3430 8393 8844 -1445
AT1G77360 2436 -5964 1433 -5791 -2048
AT1G52640 2410 -2700 3768 -938 -8710
AT2G36240 2399 2221 4718 258 1309
AT4G21170 2397 -1583 2230 -1430 -658
AT1G52620 -2349 -557 4031 2310 -4654
AT5G55840 -2345 1649 -2388 6852 -7708
AT1G76280 -2322 4017 1018 5463 -9372
AT1G09820 -2304 -4837 -1358 -4259 1924
AT2G44880 -2267 1294 4814 2772 -7269
AT5G15010 2233 -1429 2291 7814 -3696
AT1G62720 -2161 -98 -620 5457 -3097
AT1G55630 2111 -2116 -429 8296 251
AT1G09680 2082 3864 8533 886 -3566
AT2G32630 -2038 -6481 -4098 -2845 -8973
AT2G35130 -2010 9173 745 -613 -5081
AT1G80150 -1955 -2740 -7398 -2194 -8860
AT3G49730 -1935 -6973 3484 3672 3801
AT1G63230 1916 8906 3609 7359 -1122
AT1G62680 1875 970 -1420 5826 -3110
AT5G57250 1844 -1969 757 105 2192
AT1G62914 -1835 -717 -6235 7164 -8692
AT5G47360 1827 -2241 6184 1971 605
AT2G33680 1745 5920 3049 8424 -9446
AT3G16710 -1584 1180 3795 2656 -5818
AT1G03100 1574 4332 3129 6907 -7489
AT2G26790 1559 -1124 698 5063 -8097
AT1G16480 -1394 -2082 -1835 6008 -4322
AT1G31840 1368 8356 915 2870 -2131
AT4G01400 -1345 -317 -477 2199 -4979
AT5G27300 -1293 6519 4398 8519 173
AT1G79540 -1277 1964 -1572 -3080 -9789
AT5G64320 1294 3443 3395 4441 -3382
AT5G06400 1272 -2748 -1430 -6447 -8493
AT3G62470 1233 -1257 -1368 -3248 -7229
AT3G61360 1226 -6813 -4748 3061 -4914
AT1G63080 -1197 -4214 654 8342 -2875
AT3G59040 -1151 -7941 -4482 -1909 -10063
AT3G60980 -1113 2525 -994 -2193 -7307
AT1G71060 1095 2740 7964 2386 -7092
AT3G51320 1069 6433 6273 6668 -2876
AT4G26800 -1013 4061 -4788 6629 -9740
AT3G23020 -1001 -6571 -2253 -3165 -9343
AT5G28340 -1000 -3271 2429 124 2783
AT3G58590 1033 7515 7590 8692 -9521
AT5G62370 -986 8203 1531 6866 -7171
AT5G16640 990 1797 3910 7740 995
AT1G05600 -904 2696 3907 8988 -3177
AT5G40400 -793 6796 7824 8463 -2315
AT2G19280 758 3717 4222 7599 -5167
AT5G08310 -741 7577 1269 7729 -3141
AT1G02420 -731 -2536 -2196 -982 -5876
AT1G12300 704 449 2724 2401 -5329
AT1G20300 -687 230 -3379 -1535 -11021
AT4G28010 -675 -2745 -1570 6821 -6945
AT1G19290 -636 -501 -360 4154 -7216
AT1G18900 -567 -2020 -4596 2547 -481
AT3G15200 -534 -7324 -8168 -5485 965
AT5G41170 469 2788 -2540 -4222 -2481
AT1G10910 -389 3767 883 6814 -10409
AT3G56030 -385 -6296 -8418 2460 -8136
AT1G06710 -336 1597 -3 8227 -8654
AT3G22670 304 -692 -208 8890 661
AT1G77405 -232 -5740 -1486 2598 -8524
AT2G17140 194 1280 3333 3880 -9438
AT1G62590 -178 -623 -4546 -1819 -6767
AT1G26460 -169 3591 3789 6817 -6213
AT5G43820 -106 -487 8132 6560 141
AT3G16010 -78 567 1609 -2082 -3790





RNA_REGULATION_OF_TRANSCRIPTION_MYB-RELATED_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_MYB-RELATED_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 16
pMANOVA 0.0586
p.adjustMANOVA 0.0967
s.dist 0.521
s.de0 -0.375
s.de3 -0.137
s.de6 -0.287
s.de12 -0.097
s.de24 0.143
p.de0 0.00946
p.de3 0.343
p.de6 0.0467
p.de12 0.502
p.de24 0.321




Top 20 genes
Gene de0 de6
AT5G58900 -9381 -8495
AT1G01520 -6493 -8068
AT5G05790 -7381 -6811
AT5G58340 -9050 -5053
AT1G70000 -6112 -6647
AT1G49010 -4955 -7499
AT3G16350 -1796 -9782
AT3G11280 -4127 -4152
AT1G19000 -1588 -1896

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G38090 -9515 -1767 1614 -2182 2084
AT5G58900 -9381 -7145 -8495 -1197 -10904
AT5G04760 9181 -7806 -2967 -5710 8559
AT5G58340 -9050 -7354 -5053 -2947 1033
AT5G56840 -8702 6895 5830 8546 -1501
AT1G74840 -7743 3513 1135 453 -8107
AT5G05790 -7381 184 -6811 5692 3289
AT1G70000 -6112 5492 -6647 333 5380
AT1G49010 -4955 -3168 -7499 -10583 2611
AT3G11280 -4127 -3451 -4152 -3686 1484
AT1G35516 2931 6057 5784 8339 3566
AT1G17520 2229 -6987 -6410 -8632 -5861
AT3G16350 -1796 -4608 -9782 -9990 -5607
AT1G19000 -1588 2716 -1896 3998 -2557
AT5G01200 417 6168 4760 2196 6840
AT1G01520 -6493 -3354 -8068 -9341 6499





SIGNALLING_RECEPTOR_KINASES_MISC

SIGNALLING_RECEPTOR_KINASES_MISC
metric value
setSize 37
pMANOVA 1.71e-05
p.adjustMANOVA 0.000113
s.dist 0.511
s.de0 -0.166
s.de3 0.162
s.de6 0.136
s.de12 0.39
s.de24 0.19
p.de0 0.0807
p.de3 0.0887
p.de6 0.151
p.de12 3.95e-05
p.de24 0.0452




Top 20 genes
Gene de12 de24
AT2G46850 7112 8468
AT1G51850 5898 8409
AT3G46280 6378 7270
AT2G04300 9309 4958
AT4G20450 4819 8461
AT1G63600 4816 7305
AT4G10390 5128 4589
AT5G16900 6956 3045
AT5G06940 5882 1562
AT3G19320 2911 2975
AT1G49100 1939 2626
AT1G05700 1017 4516
AT1G51805 1980 2196
AT3G46260 5869 697

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G51820 -9906 -9361 -9184 -7924 1161
AT1G63600 -9748 10192 5697 4816 7305
AT2G46850 8636 3596 8262 7112 8468
AT1G51805 -8726 9823 -2467 1980 2196
AT5G01740 -8287 -6801 -3500 -2540 4499
AT1G51830 -8209 3212 -9879 1757 -10235
AT2G04300 -7559 -6333 4678 9309 4958
AT1G63570 7472 9332 8289 5267 -817
AT3G19300 -6139 3308 2560 119 -4630
AT1G49730 6010 -661 6397 -2088 -9397
AT1G51860 -5810 21 -4211 7603 -4285
AT1G33260 -5522 6395 -5631 -4786 5393
AT2G19210 5477 -381 7442 -2941 7523
AT3G46270 -5199 481 2132 7246 -182
AT3G19320 -5134 5391 8342 2911 2975
AT4G10390 -4975 1221 -9135 5128 4589
AT1G05700 4896 5053 2995 1017 4516
AT3G15890 -4922 -6379 -7829 -1458 6844
AT2G14440 -4176 -1239 -1222 7825 -8823
AT5G06940 3978 9659 7139 5882 1562
AT3G46260 -3780 3286 4993 5869 697
AT3G46280 -3185 9672 -3910 6378 7270
AT5G46080 2921 -6596 -7549 -3666 8263
AT5G20050 -2907 -7270 -724 464 -3186
AT1G51890 -2714 -2183 -9118 5467 -8756
AT3G45920 2574 -456 5184 -1191 419
AT1G51790 -2431 -408 642 9164 -3921
AT3G09190 -2373 9006 9023 7997 -4406
AT4G20450 2279 5611 8793 4819 8461
AT5G16900 1918 8268 8354 6956 3045
AT3G05990 -1890 9883 7272 9100 -83
AT1G15470 1300 -4083 686 -3778 -2343
AT2G28960 1160 3077 110 9028 -2937
AT1G67720 -544 15 -635 5702 -1950
AT1G49100 205 4618 5054 1939 2626
AT2G28970 129 7489 2219 8970 -1985
AT1G51850 -104 1548 4866 5898 8409





RNA_REGULATION_OF_TRANSCRIPTION_B3_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_B3_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 16
pMANOVA 0.00036
p.adjustMANOVA 0.00146
s.dist 0.491
s.de0 -0.158
s.de3 -0.362
s.de6 0.154
s.de12 0.0228
s.de24 -0.246
p.de0 0.273
p.de3 0.0121
p.de6 0.287
p.de12 0.875
p.de24 0.088




Top 20 genes
Gene de3 de24
AT4G34400 -8880 -9938
AT4G31620 -5837 -10263
AT2G24690 -7849 -6933
AT5G32460 -6434 -8142
AT3G18960 -4792 -8956
AT3G06220 -5736 -6323
AT4G01580 -4004 -8099
AT2G24645 -2720 -8294
AT5G58280 -3627 -2063

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT2G24690 -9884 -7849 -8114 -4335 -6933
AT5G32460 -9126 -6434 -6554 4775 -8142
AT4G34400 -5079 -8880 380 -6371 -9938
AT1G16640 -4694 1935 1155 6780 -7024
AT2G24680 4608 1080 3864 -3073 4750
AT3G06220 -3956 -5736 1119 -3484 -6323
AT4G01580 3718 -4004 4550 5590 -8099
AT2G35310 3637 -423 3024 -4551 1554
AT1G26680 -3138 675 -3648 6860 4788
AT5G60142 -3010 -3791 -3874 2408 262
AT4G31620 -2450 -5837 8126 -7823 -10263
AT3G18960 2068 -4792 5208 -8077 -8956
AT1G49475 1231 5210 8897 8758 5955
AT4G31650 -1185 -5973 -4183 -3464 2394
AT5G58280 1157 -3627 8050 967 -2063
AT2G24645 -924 -2720 4801 -262 -8294





NOT_ASSIGNED_NO_ONTOLOGY_TETRATRICOPEPTIDE_REPEAT_(TPR)

NOT_ASSIGNED_NO_ONTOLOGY_TETRATRICOPEPTIDE_REPEAT_(TPR)
metric value
setSize 11
pMANOVA 0.191
p.adjustMANOVA 0.249
s.dist 0.491
s.de0 0.0899
s.de3 -0.207
s.de6 -0.0797
s.de12 -0.235
s.de24 -0.359
p.de0 0.606
p.de3 0.235
p.de6 0.647
p.de12 0.178
p.de24 0.0394




Top 20 genes
Gene de24 de12
AT1G01320 -10613 -10444
AT1G77230 -9959 -8099
AT3G52140 -10647 -4237
AT5G63200 -6979 -6268
AT3G17670 -1447 -8377

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT4G37210 7871 -1832 -970 -3071 994
AT3G17670 5856 8884 7141 -8377 -1447
AT3G16760 -3744 -3236 -4367 1034 2375
AT2G31240 3336 -3558 496 6355 -4042
AT3G52140 -2486 -1065 -3660 -4237 -10647
AT1G56090 2147 -6130 -3733 -8302 773
AT5G63200 -1958 -2297 -179 -6268 -6979
AT1G01320 -1759 -6005 -5709 -10444 -10613
AT5G17270 1541 1884 661 2545 -8881
AT1G64583 -1424 2209 7970 6549 -2829
AT1G77230 -308 -6722 -7995 -8099 -9959





PROTEIN_DEGRADATION_UBIQUITIN_PROTEASOM

PROTEIN_DEGRADATION_UBIQUITIN_PROTEASOM
metric value
setSize 11
pMANOVA 0.183
p.adjustMANOVA 0.245
s.dist 0.482
s.de0 0.408
s.de3 0.0323
s.de6 0.218
s.de12 -0.133
s.de24 0.00308
p.de0 0.0192
p.de3 0.853
p.de6 0.211
p.de12 0.446
p.de24 0.986




Top 20 genes
Gene de0 de6
AT3G02200 9685 8940
AT1G67250 8757 7086
AT5G38650 8837 6270
AT4G19006 7411 6449
AT5G15610 6616 3837
AT3G53970 5003 3996

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G02200 9685 8881 8940 3128 1819
AT5G38650 8837 -1312 6270 -6663 -1105
AT1G67250 8757 4468 7086 -2152 3896
AT5G53540 8078 2840 -1595 1376 -1242
AT4G19006 7411 9337 6449 -904 4855
AT5G15610 6616 2702 3837 1669 -5460
AT5G57950 -5644 -6773 427 -3662 -2429
AT3G53970 5003 5849 3996 3628 2272
AT1G53780 -4519 -5778 -5929 -4734 -10877
AT3G15180 3573 -6188 -7906 -6303 2636
AT3G03060 -3319 -5238 1212 -6338 -5308





MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE
metric value
setSize 12
pMANOVA 0.272
p.adjustMANOVA 0.333
s.dist 0.482
s.de0 0.399
s.de3 0.195
s.de6 0.165
s.de12 0.0312
s.de24 0.0804
p.de0 0.0166
p.de3 0.243
p.de6 0.322
p.de12 0.852
p.de24 0.63




Top 20 genes
Gene de0 de3
AT5G08690 9247 9726
AT5G08680 7526 8827
AT5G08670 6681 9868
AT5G60730 4377 4293
AT5G47030 407 4935
AT2G07698 8174 140

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G08690 9247 9726 7404 -182 496
AT2G07698 8174 140 8037 8935 320
AT5G08680 7526 8827 2139 -270 5316
AT3G46430 -7586 -3620 -4989 -1581 -4037
AT5G08670 6681 9868 5110 496 2234
AT4G29480 5976 -4026 -1265 -7983 -336
AT2G19680 5793 -1507 3413 -1733 416
AT1G51650 5269 -2458 -1168 -1128 -920
AT5G60730 4377 4293 7791 8153 -949
AT4G26210 4331 -5757 -3371 -4040 -6247
AT5G12420 -2673 8892 -5088 5648 791
AT5G47030 407 4935 446 -9271 378





DNA_SYNTHESIS/CHROMATIN_STRUCTURE

DNA_SYNTHESIS/CHROMATIN_STRUCTURE
metric value
setSize 59
pMANOVA 0.000716
p.adjustMANOVA 0.00273
s.dist 0.48
s.de0 -0.228
s.de3 -0.222
s.de6 -0.236
s.de12 -0.0565
s.de24 -0.266
p.de0 0.00243
p.de3 0.0032
p.de6 0.00173
p.de12 0.453
p.de24 0.000417




Top 20 genes
Gene de24 de6
AT2G31830 -10519 -8254
AT2G01130 -7227 -8899
AT3G21530 -6492 -8088
AT1G75230 -9116 -5600
AT4G31570 -4974 -9224
AT1G51080 -5099 -8607
AT2G43900 -10840 -3819
AT5G67630 -6201 -6347
AT5G63960 -8927 -3850
AT4G31210 -10955 -3008
AT2G35920 -10277 -2756
AT5G08110 -5306 -5189
AT1G65810 -4861 -5451
AT1G58060 -7000 -3677
AT2G42320 -4842 -4346
AT5G46580 -10244 -2018
AT5G11350 -3725 -5186
AT3G55060 -3041 -6111
AT4G30100 -2077 -8337
AT5G39770 -6271 -2666

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G20720 -9663 -1512 -967 -2602 -8155
AT4G18820 -9380 -7836 -5898 2808 -2111
AT4G31570 -9281 -6291 -9224 -1106 -4974
AT5G11200 9119 5926 6166 3836 -3814
AT2G23840 -9092 -2421 -7409 -8498 -666
AT4G30100 -8865 -6068 -8337 -6152 -2077
AT3G18950 -8650 -7656 -10165 -4160 5426
AT5G08110 -8093 -2426 -5189 2115 -5306
AT1G51080 -7605 -8599 -8607 -10567 -5099
AT3G55490 -7495 -4160 -5637 -6480 2632
AT2G19490 7441 7844 3157 5939 -6750
AT2G01130 -7421 -3919 -8899 229 -7227
AT2G01900 -7352 4008 -1778 -1172 -4386
AT5G63960 -6954 1786 -3850 -1957 -8927
AT3G55060 -6840 -7918 -6111 -8119 -3041
AT3G21530 -6610 -2216 -8088 -224 -6492
AT5G11350 -6434 314 -5186 2154 -3725
AT3G57060 -6115 -474 1446 1914 -316
AT4G31210 -6081 -1216 -3008 5464 -10955
AT5G32440 5941 -4314 3041 -5924 3252
AT3G47490 -5894 8983 1627 452 1275
AT1G65810 -5815 3009 -5451 7540 -4861
AT2G19120 5218 1283 1734 -109 428
AT2G13840 5104 -1658 3686 -2431 3688
AT2G48030 -4849 1581 5589 -7463 -8965
AT2G42320 -4570 1986 -4346 -5400 -4842
AT1G35530 -4427 -5683 -249 -5778 -2341
AT3G53320 -4402 -1386 -5595 -2396 -64
AT3G56270 4277 -4347 -1876 -8442 8608
AT1G11800 4160 4813 6728 5796 1608
AT1G27850 -4034 309 -2700 1287 -50
AT1G67320 3866 3726 4819 388 -6184
AT4G01020 -3189 721 -5746 3897 -1538
AT1G74350 -3123 -1086 -812 1909 -9147
AT4G19130 -3118 -1173 -2707 323 -433
AT2G31830 -3109 -4231 -8254 -7722 -10519
AT1G18680 3093 -2394 -3599 -8674 -668
AT3G53440 -3087 -7434 -6114 -8930 -154
AT5G67630 2954 -5413 -6347 -6553 -6201
AT5G23520 -2902 -5601 -2562 5715 -296
AT1G34380 2336 705 2503 -4252 -9111
AT1G14460 -2303 -3897 -1987 3452 -1941
AT5G04050 2024 -3460 1724 908 -4332
AT3G09100 -1727 -2603 712 6155 3537
AT1G12700 -1613 2165 766 269 -5383
AT2G32000 -1606 -2928 401 -1323 -10398
AT4G24790 -1592 6241 2136 2564 -292
AT5G04895 -1581 2709 268 7147 -10600
AT1G49450 -1564 -7141 -10118 4943 4629
AT1G75230 -1458 -5404 -5600 -8923 -9116
AT5G46580 -761 -5949 -2018 2690 -10244
AT5G39770 673 -936 -2666 6391 -6271
AT2G43900 583 -7665 -3819 -8903 -10840
AT1G58060 506 -1902 -3677 -1554 -7000
AT5G26680 321 -2052 2884 7799 -9125
AT2G35920 -163 -3461 -2756 -3330 -10277
AT2G47680 150 55 -1950 -8555 -5307
AT1G54440 -76 -3010 -798 1886 -2748
AT5G06260 -10 -4766 -7707 -5091 -701





RNA_REGULATION_OF_TRANSCRIPTION_GENERAL_TRANSCRIPTION

RNA_REGULATION_OF_TRANSCRIPTION_GENERAL_TRANSCRIPTION
metric value
setSize 14
pMANOVA 0.151
p.adjustMANOVA 0.211
s.dist 0.479
s.de0 0.0849
s.de3 -0.254
s.de6 -0.107
s.de12 -0.267
s.de24 -0.273
p.de0 0.582
p.de3 0.0997
p.de6 0.487
p.de12 0.0839
p.de24 0.0768




Top 20 genes
Gene de24 de12
AT4G39160 -6300 -10026
AT3G56510 -6131 -9316
AT3G13940 -5592 -8752
AT3G25940 -6240 -5740
AT1G07480 -3063 -8891
AT1G17680 -4747 -5469
AT4G25180 -3887 -4330

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G23710 9054 1143 2837 5329 3923
AT4G07950 7660 -2793 7976 832 -5331
AT4G39160 -7656 -9226 -7341 -10026 -6300
AT1G07470 6653 -1865 -1549 -9146 5031
AT5G09380 -6475 -5086 -4483 461 -9141
AT1G07480 5846 -3895 -1736 -8891 -3063
AT3G25940 -4772 -1026 -6893 -5740 -6240
AT3G55770 -3819 7181 7256 367 -1581
AT5G09240 3680 706 4846 4236 -6965
AT1G17680 -2636 -5182 -6171 -5469 -4747
AT3G56510 -2575 -8306 -5932 -9316 -6131
AT3G13940 2216 -5632 -6673 -8752 -5592
AT4G25180 2205 -761 -563 -4330 -3887
AT4G17020 1459 5315 1334 4745 -3071





MISC_MISC2

MISC_MISC2
metric value
setSize 18
pMANOVA 0.0178
p.adjustMANOVA 0.0391
s.dist 0.476
s.de0 0.208
s.de3 0.0254
s.de6 -0.0535
s.de12 -0.204
s.de24 0.372
p.de0 0.127
p.de3 0.852
p.de6 0.694
p.de12 0.133
p.de24 0.00632




Top 20 genes
Gene de24 de0
AT4G21580 8463 9777
AT2G32520 8138 9336
AT3G56460 7723 9471
AT2G45630 7067 8832
AT3G51000 4280 6944
AT1G35420 5187 5434
AT3G23600 3511 6523
AT4G02340 3370 5638
AT5G64250 3821 4723

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT4G21580 9777 -4734 -4571 -5102 8463
AT4G15960 -9914 3109 -3714 -940 2955
AT3G05600 -9706 -5373 792 -2248 -10608
AT3G56460 9471 7884 4145 -6448 7723
AT2G32520 9336 8528 7543 -618 8138
AT2G45630 8832 7326 6832 5145 7067
AT4G37550 -7593 -7744 -9101 -2965 3108
AT3G23570 7285 -4656 -8835 2244 -5601
AT3G51000 6944 -2279 -4188 -7791 4280
AT3G23600 6523 7258 -1063 -4592 3511
AT4G02340 5638 544 132 -9767 3370
AT1G35420 5434 2800 6081 -6097 5187
AT4G37560 -5211 -6614 -9587 -7835 6334
AT5G64250 4723 -6991 -10157 -3549 3821
AT5G45370 -3559 4961 4288 5694 365
AT1G73740 -2376 4611 -1450 -9526 2781
AT1G72190 2114 5124 5605 3881 -967
AT4G15955 -1356 -628 5102 3159 -639





MISC_GDSL-MOTIF_LIPASE

MISC_GDSL-MOTIF_LIPASE
metric value
setSize 43
pMANOVA 9.37e-08
p.adjustMANOVA 8.43e-07
s.dist 0.468
s.de0 -0.17
s.de3 0.353
s.de6 -0.0775
s.de12 0.199
s.de24 0.145
p.de0 0.0543
p.de3 6.3e-05
p.de6 0.379
p.de12 0.0243
p.de24 0.101




Top 20 genes
Gene de3 de12
AT3G62280 10427 8635
AT2G19050 9917 8039
AT5G45920 9603 8279
AT1G28570 9715 6552
AT5G03610 9863 6229
AT1G74460 9394 6443
AT2G19060 10549 5301
AT2G23540 8228 6785
AT3G50400 7658 6620
AT1G33811 9807 5000
AT4G16220 4559 9463
AT1G75920 9131 4312
AT2G38180 4172 8373
AT1G29660 6871 2925
AT4G18970 7579 2603
AT1G54790 5263 3488
AT5G62930 4518 4021
AT2G04570 6682 2664
AT4G28780 9836 1723
AT2G27360 5224 3227

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G37690 -10132 1426 -9548 4320 1502
AT5G33370 -10048 -9045 -7478 4946 -6315
AT5G62930 9348 4518 8433 4021 3853
AT4G26790 -9287 7875 -8599 1230 5368
AT5G45960 -8747 -3691 -3186 1071 -2450
AT3G26430 -8320 -7185 -5113 -7916 -7553
AT3G53100 -8299 10574 2092 1400 927
AT5G45920 8182 9603 7279 8279 8771
AT4G10950 8116 -6232 -3328 1653 8302
AT2G19060 8069 10549 9402 5301 7853
AT3G05180 -8013 3812 -2419 3245 -853
AT1G33811 -7998 9807 1392 5000 -2142
AT5G08460 7701 3470 8198 462 -3718
AT1G31550 -7334 -2651 -6251 -3309 3214
AT1G28570 -7310 9715 1098 6552 2619
AT1G28590 -7087 -2713 -2622 6993 -10966
AT5G45950 6547 7753 -5768 -7982 6482
AT2G19050 6475 9917 6590 8039 8867
AT2G38180 -6241 4172 70 8373 8356
AT2G27360 -6188 5224 -4698 3227 5184
AT1G75920 -5968 9131 -148 4312 1326
AT2G23540 -5313 8228 -5782 6785 3712
AT5G14450 -5302 2985 4478 -4876 -5358
AT1G28610 -5264 8245 -4343 -7633 -9425
AT1G28580 4989 2423 3926 -743 -8356
AT1G28600 -4927 988 1480 -8833 7047
AT2G03980 -4490 -6115 -5180 -7107 -1415
AT1G54790 -4175 5263 -5923 3488 -689
AT4G18970 4061 7579 6993 2603 -10807
AT3G48460 3961 5144 -7024 -8956 8938
AT3G62280 3625 10427 9838 8635 8633
AT2G04570 -3643 6682 -6318 2664 5643
AT5G03610 -3371 9863 -6087 6229 949
AT4G28780 3120 9836 5742 1723 -10805
AT1G74460 -2788 9394 -6187 6443 3863
AT3G50400 2406 7658 -4559 6620 6363
AT4G16220 -1507 4559 -6899 9463 6689
AT5G45670 -1008 7293 1900 130 -6033
AT1G29670 -640 -2767 -1396 -9072 -6766
AT1G09390 -300 1012 -207 -7253 -10640
AT1G29660 -228 6871 904 2925 -10368
AT5G55050 -203 -9200 -4460 -5304 8597
AT5G18430 72 1246 4275 5029 337





REDOX_GLUTAREDOXINS

REDOX_GLUTAREDOXINS
metric value
setSize 16
pMANOVA 0.00984
p.adjustMANOVA 0.0243
s.dist 0.452
s.de0 0.0991
s.de3 -0.112
s.de6 0.214
s.de12 0.119
s.de24 0.35
p.de0 0.493
p.de3 0.437
p.de6 0.138
p.de12 0.412
p.de24 0.0154




Top 20 genes
Gene de24 de6
AT5G03870 7940 6739
AT5G13810 6848 7205
AT1G77370 6876 6169
AT2G41330 7096 5775
AT2G20270 3835 6289
AT5G01420 3371 6379
AT4G10630 3064 6136
AT1G32760 1883 7554
AT5G39865 910 6392

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G77370 9150 5001 6169 -2985 6876
AT2G20270 8458 5141 6289 -8227 3835
AT5G40370 8053 -65 -5297 -7888 1177
AT5G06470 -7672 -6946 -5391 1763 -1140
AT5G58530 -6307 -6168 -6501 -9309 -2104
AT1G03850 4942 -2387 5356 -7 -10152
AT3G28850 4279 -5990 -3604 7401 2895
AT5G13810 4220 6258 7205 7215 6848
AT5G39865 3772 4538 6392 7899 910
AT5G01420 3371 2027 6379 4488 3371
AT3G57070 -2819 9211 -3932 6347 6670
AT4G10630 -2677 -5868 6136 2514 3064
AT5G03870 -2330 -6416 6739 4 7940
AT2G41330 -1984 5362 5775 2500 7096
AT1G32760 794 -5645 7554 3699 1883
AT1G64500 -8568 -8705 -6727 -5206 1081





RNA_REGULATION_OF_TRANSCRIPTION_PUTATIVE_TRANSCRIPTION_REGULATOR

RNA_REGULATION_OF_TRANSCRIPTION_PUTATIVE_TRANSCRIPTION_REGULATOR
metric value
setSize 75
pMANOVA 2.38e-05
p.adjustMANOVA 0.000147
s.dist 0.451
s.de0 -0.0703
s.de3 -0.303
s.de6 -0.144
s.de12 -0.167
s.de24 -0.242
p.de0 0.293
p.de3 5.73e-06
p.de6 0.0316
p.de12 0.0126
p.de24 0.000292




Top 20 genes
Gene de3 de24
AT1G76010 -9178 -10334
AT1G20220 -9423 -9558
AT3G08020 -7406 -10633
AT3G02400 -9534 -7931
AT3G17450 -8547 -8843
AT3G15590 -8722 -8409
AT1G67590 -9144 -7105
AT3G61260 -8592 -6486
AT3G26910 -9094 -5760
AT2G20710 -5304 -9620
AT1G75560 -6668 -7106
AT1G68730 -4501 -9937
AT4G39680 -4652 -9037
AT2G46040 -6972 -5946
AT3G52170 -4279 -9503
AT2G19260 -7578 -5253
AT1G15480 -4545 -8531
AT5G22760 -5678 -6631
AT2G42190 -9403 -3917
AT1G77800 -6238 -4857

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT3G02400 -10121 -9534 -8321 -10645 -7931
AT2G42190 -10075 -9403 -5939 -8096 -3917
AT1G76010 -10068 -9178 -7462 -6200 -10334
AT5G63700 -9991 -4931 -4381 -4986 -2420
AT1G20220 -9849 -9423 -523 -9245 -9558
AT5G18230 -9607 -4408 -9249 -8719 -5236
AT1G63295 -9285 -4708 -4689 -3477 -937
AT4G28830 9000 7340 6994 1610 -4338
AT1G73230 8787 1827 6123 -3592 -4125
AT5G60170 -8583 -5662 -8956 -5923 -4699
AT5G22760 -8475 -5678 -7656 2904 -6631
AT1G07590 8350 3080 2437 -7537 7696
AT4G01960 8339 -2963 1773 3010 7705
AT1G01210 8337 2704 5069 3428 -6158
AT4G11560 -8382 -8991 -7866 -8488 -2520
AT1G67590 -8049 -9144 1704 -6497 -7105
AT1G77800 -7944 -6238 -8424 -4610 -4857
AT3G20280 -7803 -2206 -4945 -8366 -9971
AT5G11430 -7628 -7362 -7922 -5845 -2503
AT2G18090 7233 -153 -7242 -6164 -1312
AT1G60770 7142 3918 7744 6186 -3385
AT4G12540 7100 2280 5213 794 4360
AT1G44770 7060 8137 7974 6073 6684
AT3G58470 6846 4861 7500 143 -8215
AT3G26910 -6890 -9094 -9458 -7974 -5760
AT1G68730 -6853 -4501 -3821 -4994 -9937
AT4G39680 -6591 -4652 -3022 -4603 -9037
AT1G29220 -6536 -8786 -5635 -10044 -1480
AT5G09450 6377 5634 772 -2058 5882
AT5G55600 -6379 -2991 -6093 7252 -5066
AT1G02370 5905 3186 -29 7511 -7651
AT5G52890 5873 -2323 -5341 -1860 5138
AT5G47430 5800 -6930 15 -6670 -869
AT2G19260 -5830 -7578 -3829 -3038 -5253
AT3G61260 -5723 -8592 -4833 -8633 -6486
AT1G51540 5585 -4062 3454 -6829 5526
AT1G02150 5567 411 2101 -8497 -7974
AT1G14490 -5372 -2641 -5119 -9294 -1854
AT1G50620 -5097 -4660 -6612 -8260 813
AT4G01990 5010 -1808 -4920 3071 -3439
AT3G22220 4968 -5333 769 -1003 957
AT3G45830 -4951 -8714 -8857 -7445 -546
AT5G07030 -4791 10004 1910 -2654 -5312
AT2G25640 4476 2290 1505 2955 -1435
AT5G19490 -4504 -8133 -3217 -7151 1185
AT3G08020 -4414 -7406 -7430 -5860 -10633
AT3G15590 -4244 -8722 -6864 -7472 -8409
AT1G68580 3794 -2374 4810 3127 -5910
AT4G02820 3736 -2966 1156 6864 -3646
AT5G54930 -3730 -8464 -8701 -10523 -3200
AT1G68030 3545 -1484 550 -3842 -2675
AT3G17450 -3590 -8547 -7333 -5870 -8843
AT3G52170 -3437 -4279 -704 -2906 -9503
AT5G24450 -3076 -2535 -3653 1426 -5298
AT1G75560 3025 -6668 -1854 144 -7106
AT4G21705 2653 -4700 2914 4228 247
AT3G17460 2329 3873 1944 -7975 -4921
AT4G10600 2245 1894 -35 2002 973
AT1G02080 -1964 2791 -2509 1732 -4563
AT2G46040 1907 -6972 -2083 -524 -5946
AT1G19340 1858 5874 7720 8127 -1472
AT4G12750 1702 1182 -1597 6735 -10180
AT5G23920 1650 9388 4645 -7273 1004
AT5G27460 1375 -3472 336 3398 -7178
AT1G63850 1358 2768 5187 -1071 7558
AT5G14510 -1232 -2687 -4765 3604 -687
AT3G49410 1165 1490 7462 7067 -5340
AT2G20710 1058 -5304 -1413 -8205 -9620
AT1G77250 -979 -7773 -7194 -6635 -1493
AT5G25520 850 -2848 -5499 -3461 -4870
AT3G28720 723 5612 5358 -144 -5067
AT5G10940 438 -4464 -1264 -226 -1814
AT1G15480 -409 -4545 -2524 5001 -8531
AT2G26780 -327 3247 -535 8472 -3705
AT1G48610 -61 -779 6513 6235 3007





PROTEIN_DEGRADATION_UBIQUITIN_E3_SCF_FBOX

PROTEIN_DEGRADATION_UBIQUITIN_E3_SCF_FBOX
metric value
setSize 178
pMANOVA 5.55e-12
p.adjustMANOVA 7.85e-11
s.dist 0.437
s.de0 0.167
s.de3 0.173
s.de6 0.17
s.de12 0.319
s.de24 0.0486
p.de0 0.000119
p.de3 6.65e-05
p.de6 9.49e-05
p.de12 2.19e-13
p.de24 0.264




Top 20 genes
Gene de12 de3
AT2G26860 9157 10540
AT4G18380 9205 10323
AT5G27920 9070 10468
AT5G49610 9351 10046
AT5G22730 9457 9794
AT1G16930 9384 8777
AT5G39250 9267 8505
AT5G38590 8569 8919
AT3G59210 8921 8490
AT3G58900 8923 7942
AT4G14096 7713 8987
AT1G64840 8215 8232
AT5G22700 8120 8171
AT3G58980 8582 7719
AT2G17830 7852 8416
AT1G25055 8421 7611
AT3G58930 7429 8486
AT4G39240 8577 7343
AT3G59000 6140 9438
AT3G58820 8201 6989

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT5G38590 9669 8919 9893 8569 6430
AT5G07610 -9705 -6573 -8548 -9803 1817
AT5G27750 9535 8543 7127 -2266 372
AT1G10890 -9615 -8487 -8113 -4376 -11065
AT4G19870 -9115 -5737 -2339 1546 -9284
AT1G70360 8874 8902 9138 220 837
AT1G10780 8699 5234 9561 2720 -1008
AT1G55000 8696 7075 4668 -4270 4117
AT5G50270 8574 7918 8244 78 6695
AT5G27920 8448 10468 9233 9070 1769
AT1G30200 8332 1626 2281 -5280 -2511
AT1G10110 -8362 -5479 -6313 -4651 -6090
AT3G58930 8221 8486 5324 7429 3044
AT2G44130 8220 -3566 5251 -9508 -8615
AT4G00755 8133 6307 1207 -17 -3749
AT1G24881 8007 -5539 6776 -6651 4703
AT2G41170 7983 -4969 -175 391 9065
AT1G22040 7972 6618 1964 7978 -367
AT2G27310 -8016 -9345 -10134 -8042 -9393
AT1G27540 7723 4365 6956 9102 5040
AT1G64840 7606 8232 6266 8215 673
AT1G13780 7580 1687 6053 -189 6003
AT3G26920 7559 6121 4635 9224 -4939
AT3G07870 7484 4309 5880 2103 4292
AT5G60610 7483 592 -2468 954 4231
AT2G29910 -7508 -1730 -269 5499 -234
AT5G39250 7451 8505 8531 9267 -1276
AT1G16250 7449 4328 8149 7400 -159
AT2G32560 -7466 8942 5235 3664 6244
AT5G35995 -7459 1826 3350 7189 -7018
AT2G40920 7423 -1403 2559 -5742 -6812
AT1G74510 -7429 -7589 -1846 3919 4136
AT2G04230 -7399 2896 -3329 4730 -6949
AT4G22280 7309 5869 5279 4847 -8944
AT3G59150 7267 8215 8486 2422 4494
AT1G67190 7073 4625 7988 8441 848
AT1G06630 6814 8680 6855 5933 -1585
AT1G57790 6634 8763 3708 1522 4154
AT1G53790 6600 373 3658 3837 2495
AT5G39450 6565 4922 6086 8438 6044
AT3G48880 -6527 -961 -8147 -1521 -5177
AT5G26960 -6492 -8072 -795 -5183 -10212
AT2G36090 -6489 -7093 -9141 -1101 -10028
AT1G15670 6389 -1016 1824 996 -5782
AT5G48990 6356 3293 -2060 9023 1738
AT3G23880 6321 8497 9539 -7111 -8185
AT3G06240 6308 -888 248 2773 6026
AT1G25055 -6366 7611 -3358 8421 -5064
AT5G63520 6138 3681 5682 5544 -1424
AT1G13570 5953 5638 4730 1300 4711
AT5G03100 5919 -673 224 -2215 1946
AT5G43190 -5929 3142 2822 -1603 -6577
AT2G26860 5657 10540 8647 9157 -605
AT1G23390 5609 7245 7372 -8661 -9564
AT3G51171 -5656 -490 1871 6243 442
AT5G67140 -5619 -2293 -6062 -2185 7333
AT5G22700 -5546 8171 3776 8120 -8941
AT5G49610 5467 10046 8295 9351 5576
AT3G57590 5452 698 4178 2304 -4596
AT1G49360 -5495 849 -3851 6593 -2526
AT3G58940 5422 4146 8980 8169 -3081
AT4G14103 5398 2052 8717 -662 -8250
AT5G44220 5288 -1879 5146 -7044 -1789
AT1G27580 -5275 8365 1839 -4843 2984
AT5G18780 5190 5450 810 6387 -156
AT3G60040 5145 38 4081 995 -497
AT3G51530 5143 6406 1791 7005 886
AT1G30930 5089 5541 4623 7929 7094
AT4G29420 4928 -2875 -6314 -3295 7042
AT4G18380 4921 10323 9336 9205 2732
AT5G18770 4854 8683 4519 4316 -1307
AT5G39480 -4889 -1322 -2554 1722 1092
AT5G49000 4741 686 -192 -2784 4073
AT1G30090 4681 -2630 -1508 4079 -3776
AT4G02740 4656 6649 5436 -3066 1509
AT1G26930 4611 -7633 -9315 -8100 -1640
AT3G62430 4590 6795 -881 4317 -3780
AT5G42350 4571 -6912 269 4850 1617
AT2G17036 -4538 2404 3174 3896 -593
AT3G58980 4403 7719 -1337 8582 7195
AT1G67480 4382 4612 2751 1253 -3191
AT1G11270 4307 2088 4973 2474 4672
AT2G17830 4260 8416 5619 7852 -4975
AT4G39550 -4286 -3658 4977 8337 -7770
AT3G58900 4211 7942 8527 8923 -2084
AT4G39600 4182 6028 1465 6194 1074
AT3G59190 -4144 1948 -7117 4250 3673
AT2G43440 -4109 1232 -7098 3057 5073
AT3G59200 4021 3161 2261 6815 6733
AT3G56470 -4062 4094 -1719 -6019 -5741
AT4G14096 3960 8987 9144 7713 1363
AT4G10400 3920 9258 7450 5360 2349
AT3G03030 3885 5967 2783 5938 6215
AT1G80960 -3902 -310 -4141 -4631 890
AT4G39590 3791 5809 4088 9057 6858
AT3G57580 3773 492 -1247 4049 -3117
AT5G56420 -3816 5944 505 3181 1622
AT5G03970 3719 -2187 -2680 -824 -8791
AT3G52030 -3773 -5860 -4156 -7049 -9047
AT1G14330 3673 -6203 6385 206 3563
AT5G22730 3652 9794 7237 9457 1067
AT3G44326 -3671 -4051 -5452 4913 -10487
AT2G18780 3552 2150 -915 2648 1459
AT1G64540 -3516 3373 -60 867 -4733
AT2G44630 3454 -131 -1027 4696 -3089
AT1G09650 -3477 -4972 -3389 -959 -6575
AT1G78730 3397 5460 -3320 4396 -499
AT1G55270 -3392 1340 4455 6630 44
AT1G25211 -3326 6214 -4824 2025 -3361
AT1G78280 3270 -2880 -7149 -171 4321
AT1G47340 3194 2396 64 -2872 -4360
AT2G43260 3135 300 2224 5021 -3627
AT4G36840 3098 -2005 2323 -7052 4921
AT4G38940 -3072 102 -3671 3405 6738
AT3G59210 3033 8490 3742 8921 4196
AT4G39570 2956 -76 2923 7186 -6629
AT5G51370 2942 -4399 -6519 7222 -399
AT4G39560 -2779 -2443 -4224 8357 -4097
AT3G19470 -2757 -2057 -6894 4012 -8429
AT2G39490 -2756 -3803 -7620 -817 -2967
AT5G39460 -2739 3016 1719 3925 -6937
AT4G39240 2660 7343 5685 8577 -305
AT1G78100 -2651 -4980 6116 -5254 3798
AT4G14905 2595 3301 1894 4561 -5079
AT5G22660 2457 7469 3345 5138 1598
AT3G24760 2415 8439 7576 656 3303
AT3G16740 2393 3252 3274 -3231 4886
AT2G42730 2353 6848 291 257 -2995
AT3G17710 2349 -2882 -2500 3410 897
AT4G05010 2292 4751 -5753 8172 8339
AT3G50710 2278 6304 7889 8165 6171
AT3G59000 -2214 9438 5008 6140 -1763
AT3G06570 2210 4742 220 -1286 5584
AT1G80440 -2116 -45 -5662 -7523 -10478
AT3G03360 -2114 3814 4038 4259 1352
AT2G44700 2034 670 866 2430 1405
AT5G46170 1953 8570 1359 1659 -2478
AT1G70590 1811 -8193 -5420 -1870 2166
AT1G49790 -1805 1921 -2198 3032 -683
AT1G22220 1733 -4294 3595 1462 6188
AT3G20710 -1677 6235 -4292 7116 5551
AT5G60060 -1599 991 -21 -2801 -9379
AT3G12350 1583 -3447 241 2210 5301
AT1G51550 1494 2075 341 2758 -4566
AT4G02760 -1420 4588 945 -200 -1819
AT5G07670 1433 965 6589 6677 -2832
AT3G58820 1390 6989 2210 8201 -4770
AT3G03040 1387 3224 -2973 8969 -7208
AT1G27420 -1340 7012 7848 4993 3128
AT4G25710 1297 -1803 1375 5578 -5590
AT3G17265 1199 3085 4100 481 -502
AT3G16210 -1056 -771 -6739 5370 -461
AT4G33160 -1045 3063 4026 -1602 6924
AT4G39580 1039 -3203 -4763 -2594 -1883
AT2G24250 -1002 6010 -244 4341 157
AT2G26030 -989 6598 1879 5041 -4792
AT3G27290 1015 -2635 -2638 5738 -820
AT3G26922 956 2172 6100 8025 -7455
AT1G16930 -849 8777 6628 9384 2725
AT3G44120 789 -102 3367 6402 -8838
AT5G42360 -730 -3508 -5459 -4991 4590
AT5G51380 523 5510 8862 8195 1057
AT1G25150 -484 -2221 -3551 4328 7916
AT3G20620 -483 1613 -4711 5619 -729
AT3G17280 409 -6141 -5262 -8388 -977
AT1G51370 400 3015 3039 3197 -4072
AT5G02910 -340 1491 4452 1368 4017
AT5G52880 -313 -3685 -3535 -4452 3345
AT5G38565 293 -1272 6978 9217 -1136
AT3G23260 -283 -2516 6780 -4311 4255
AT5G03020 -275 -2948 -2307 -3391 934
AT4G22390 -266 322 1500 5610 -6333
AT3G58530 192 1716 -79 3260 -2744
AT5G44490 159 5671 6766 7812 -7994
AT3G27150 -117 3902 7379 657 6715
AT5G60570 -49 1628 4749 9515 3646
AT5G24040 -42 -3816 -2355 3888 -4713
AT4G27050 -16 2476 1198 6103 -2246





MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
metric value
setSize 19
pMANOVA 0.079
p.adjustMANOVA 0.117
s.dist 0.433
s.de0 0.228
s.de3 -0.000811
s.de6 0.222
s.de12 -0.0148
s.de24 0.293
p.de0 0.0854
p.de3 0.995
p.de6 0.0941
p.de12 0.911
p.de24 0.027




Top 20 genes
Gene de24 de0
AT5G47890 6335 9442
AT1G79010 6031 9675
AT1G16700 4956 8333
AT2G02050 4285 9395
AT2G20360 5257 5889
AT5G18800 3980 7252
AT2G07751 7744 3665
AT4G02580 3635 7540
AT3G62790 7119 3614
AT3G03070 3965 1530
AT5G52840 329 3911
AT3G06310 125 7303

Click HERE to show all gene set members

All member genes
de0 de3 de6 de12 de24
AT1G79010 9675 5056 9045 502 6031
AT5G47890 9442 4540 7946 4904 6335
AT2G02050 9395 3497 6281 1597 4285
AT3G03100 -9394 -7216 -6290 -8428 -2413
AT1G16700 8333 5943 3554 3436 4956
AT4G02580 7540 7869 4640 607 3635
AT4G26965 -7472 -4462 -9409 -4962 -3717
AT3G06310 7303 1489 4306 392 125
AT5G18800 7252 2903 4998 2977 3980
AT5G11770 -6023 6810 -3296 -6576 -2863
AT2G20360 5889 9632 7230 6670 5257
AT2G07689 -5586 -4150 -1886 6564 -179
AT2G47690 -4559 -549 2793 5804 -299
AT5G52840 3911 -6627 2229 -2003 329
AT2G07751 3665 -4082 9808 1138 7744
AT3G62790 3614 -3294 784 -5175 7119
AT1G49140 -2205 -4331 -4869 -6107 -3221
AT3G03070 1530 2223 3107 -5662 3965
AT3G18410 -89 -6439 -813 -9204 -4194





Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.0.2 (2020-06-22)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 18.04.4 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
## 
## locale:
##  [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8    
##  [5] LC_MONETARY=en_AU.UTF-8    LC_MESSAGES=en_AU.UTF-8   
##  [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] parallel  stats4    stats     graphics  grDevices utils     datasets 
## [8] methods   base     
## 
## other attached packages:
##  [1] pkgload_1.1.0               GGally_2.0.0               
##  [3] ggplot2_3.3.2               beeswarm_0.2.3             
##  [5] gtools_3.8.2                tibble_3.0.3               
##  [7] dplyr_1.0.1                 echarts4r_0.3.2            
##  [9] RColorBrewer_1.1-2          edgeR_3.30.3               
## [11] limma_3.44.3                mitch_1.0.8                
## [13] DESeq2_1.28.1               SummarizedExperiment_1.18.2
## [15] DelayedArray_0.14.1         matrixStats_0.56.0         
## [17] Biobase_2.48.0              GenomicRanges_1.40.0       
## [19] GenomeInfoDb_1.24.2         IRanges_2.22.2             
## [21] S4Vectors_0.26.1            BiocGenerics_0.34.0        
## [23] gplots_3.0.4                reshape2_1.4.4             
## [25] getDEE2_0.99.30            
## 
## loaded via a namespace (and not attached):
##  [1] bitops_1.0-6           bit64_4.0.2            rprojroot_1.3-2       
##  [4] backports_1.1.8        tools_4.0.2            R6_2.4.1              
##  [7] KernSmooth_2.23-17     DBI_1.1.0              colorspace_1.4-1      
## [10] withr_2.2.0            htm2txt_2.1.1          tidyselect_1.1.0      
## [13] gridExtra_2.3          bit_4.0.4              compiler_4.0.2        
## [16] desc_1.2.0             labeling_0.3           caTools_1.18.0        
## [19] scales_1.1.1           genefilter_1.70.0      stringr_1.4.0         
## [22] digest_0.6.25          rmarkdown_2.3          XVector_0.28.0        
## [25] pkgconfig_2.0.3        htmltools_0.5.0        highr_0.8             
## [28] fastmap_1.0.1          htmlwidgets_1.5.1      rlang_0.4.7           
## [31] RSQLite_2.2.0          shiny_1.5.0            generics_0.0.2        
## [34] farver_2.0.3           jsonlite_1.7.0         BiocParallel_1.22.0   
## [37] RCurl_1.98-1.2         magrittr_1.5           GenomeInfoDbData_1.2.3
## [40] Matrix_1.2-18          Rcpp_1.0.5             munsell_0.5.0         
## [43] lifecycle_0.2.0        stringi_1.4.6          yaml_2.2.1            
## [46] MASS_7.3-51.6          zlibbioc_1.34.0        plyr_1.8.6            
## [49] grid_4.0.2             blob_1.2.1             gdata_2.18.0          
## [52] promises_1.1.1         crayon_1.3.4           lattice_0.20-41       
## [55] splines_4.0.2          annotate_1.66.0        locfit_1.5-9.4        
## [58] knitr_1.29             pillar_1.4.6           geneplotter_1.66.0    
## [61] XML_3.99-0.5           glue_1.4.1             evaluate_0.14         
## [64] vctrs_0.3.2            httpuv_1.5.4           testthat_2.3.2        
## [67] gtable_0.3.0           purrr_0.3.4            assertthat_0.2.1      
## [70] reshape_0.8.8          xfun_0.16              mime_0.9              
## [73] xtable_1.8-4           later_1.1.0.1          survival_3.2-3        
## [76] pbmcapply_1.5.0        AnnotationDbi_1.50.3   memoise_1.1.0         
## [79] ellipsis_0.3.1

END of report