date generated: 2020-11-12
Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch
Here is the first few lines of the input profile.
## low CRP high CRP
## A1BG 1.0864505 2.93660576
## A1BG-AS1 0.2363048 0.81097593
## A1CF 0.6265346 0.20979938
## A2M -1.1565132 -4.19066691
## A2M-AS1 -1.1830767 -3.99635746
## A2ML1 -0.3033644 -0.09097114
Here are some metrics about the input data profile:
| Profile metrics | |
|---|---|
| num_genes_in_profile | 21404 |
| duplicated_genes_present | 0 |
| num_profile_genes_in_sets | 8378 |
| num_profile_genes_not_in_sets | 13026 |
| profile_pearson_correl | 0.66054 |
| profile_spearman_correl | 0.61532 |
Here is a plot of the input profiles. Note the dynamic ranges.
Here is the contour plot of the profile including all detected genes.
Here are some metrics about the gene sets used: GMT file of genesets: ReactomePathways.gmt
| Gene sets metrics | |
|---|---|
| num_genesets | 2408 |
| num_genesets_excluded | 1045 |
| num_genesets_included | 1363 |
Number of significant gene sets (FDR<0.05)= 639
All sets with FDR<0.05. Try hovering over the points.
Significance is the -log2(p.adjustMANOVA) and effect size is the s.dist which is the hypotenuse of the s scores.
Top N= 50 gene sets
| set | setSize | pMANOVA | p.adjustMANOVA | s.dist | s.low.CRP | s.high.CRP | p.low.CRP | p.high.CRP |
|---|---|---|---|---|---|---|---|---|
| CD22 mediated BCR regulation | 58 | 1.55e-15 | 9.58e-14 | 0.400 | 0.197000 | -0.3480 | 9.56e-03 | 4.59e-06 |
| VLDLR internalisation and degradation | 11 | 1.28e-04 | 6.00e-04 | 0.642 | 0.095400 | 0.6350 | 5.84e-01 | 2.66e-04 |
| Scavenging of heme from plasma | 70 | 2.16e-17 | 1.73e-15 | 0.376 | 0.250000 | -0.2800 | 2.92e-04 | 5.05e-05 |
| Classical antibody-mediated complement activation | 68 | 7.31e-15 | 3.56e-13 | 0.366 | 0.161000 | -0.3280 | 2.16e-02 | 2.87e-06 |
| Creation of C4 and C2 activators | 70 | 4.10e-15 | 2.43e-13 | 0.359 | 0.174000 | -0.3140 | 1.18e-02 | 5.41e-06 |
| Pre-NOTCH Processing in Golgi | 18 | 2.80e-05 | 1.61e-04 | 0.522 | 0.047900 | 0.5190 | 7.25e-01 | 1.36e-04 |
| tRNA processing in the mitochondrion | 32 | 1.76e-07 | 2.05e-06 | 0.410 | -0.405000 | 0.0665 | 7.36e-05 | 5.15e-01 |
| Role of LAT2/NTAL/LAB on calcium mobilization | 73 | 4.31e-14 | 1.78e-12 | 0.329 | 0.230000 | -0.2360 | 6.84e-04 | 4.98e-04 |
| Nucleobase biosynthesis | 13 | 1.93e-03 | 6.45e-03 | 0.418 | 0.047300 | -0.4160 | 7.68e-01 | 9.46e-03 |
| FCGR activation | 75 | 3.32e-14 | 1.43e-12 | 0.342 | 0.143000 | -0.3110 | 3.22e-02 | 3.24e-06 |
| Initial triggering of complement | 77 | 3.37e-14 | 1.43e-12 | 0.332 | 0.158000 | -0.2920 | 1.65e-02 | 9.18e-06 |
| Purine ribonucleoside monophosphate biosynthesis | 10 | 1.67e-02 | 3.81e-02 | 0.351 | 0.113000 | -0.3320 | 5.35e-01 | 6.88e-02 |
| N-Glycan antennae elongation | 13 | 4.13e-03 | 1.22e-02 | 0.383 | -0.378000 | 0.0609 | 1.82e-02 | 7.04e-01 |
| Metabolism of amine-derived hormones | 10 | 1.80e-02 | 4.01e-02 | 0.380 | 0.046600 | -0.3780 | 7.99e-01 | 3.87e-02 |
| Binding and Uptake of Ligands by Scavenger Receptors | 91 | 9.23e-15 | 4.34e-13 | 0.314 | 0.280000 | -0.1420 | 3.95e-06 | 1.90e-02 |
| Pausing and recovery of Tat-mediated HIV elongation | 30 | 2.00e-05 | 1.19e-04 | 0.325 | -0.118000 | 0.3030 | 2.64e-01 | 4.10e-03 |
| Tat-mediated HIV elongation arrest and recovery | 30 | 2.00e-05 | 1.19e-04 | 0.325 | -0.118000 | 0.3030 | 2.64e-01 | 4.10e-03 |
| Class C/3 (Metabotropic glutamate/pheromone receptors) | 11 | 1.20e-02 | 2.94e-02 | 0.398 | 0.016700 | -0.3980 | 9.24e-01 | 2.23e-02 |
| Regulation of TP53 Activity through Acetylation | 29 | 8.63e-06 | 5.77e-05 | 0.400 | -0.400000 | 0.0133 | 1.92e-04 | 9.01e-01 |
| ERKs are inactivated | 13 | 1.09e-03 | 3.94e-03 | 0.545 | 0.121000 | 0.5310 | 4.49e-01 | 9.15e-04 |
| Endosomal/Vacuolar pathway | 12 | 1.28e-02 | 3.11e-02 | 0.365 | -0.363000 | 0.0386 | 2.95e-02 | 8.17e-01 |
| HIV elongation arrest and recovery | 32 | 2.99e-05 | 1.68e-04 | 0.308 | -0.115000 | 0.2850 | 2.59e-01 | 5.25e-03 |
| Pausing and recovery of HIV elongation | 32 | 2.99e-05 | 1.68e-04 | 0.308 | -0.115000 | 0.2850 | 2.59e-01 | 5.25e-03 |
| Role of phospholipids in phagocytosis | 87 | 3.18e-12 | 9.22e-11 | 0.290 | 0.135000 | -0.2570 | 3.01e-02 | 3.51e-05 |
| WNT5A-dependent internalization of FZD4 | 13 | 9.68e-04 | 3.58e-03 | 0.578 | 0.165000 | 0.5540 | 3.02e-01 | 5.46e-04 |
| Regulation of Complement cascade | 93 | 1.56e-12 | 4.61e-11 | 0.274 | 0.203000 | -0.1850 | 7.10e-04 | 2.09e-03 |
| Complement cascade | 97 | 1.56e-12 | 4.61e-11 | 0.269 | 0.201000 | -0.1790 | 6.33e-04 | 2.33e-03 |
| HDMs demethylate histones | 22 | 1.45e-03 | 5.03e-03 | 0.325 | -0.044400 | 0.3220 | 7.19e-01 | 8.96e-03 |
| SUMOylation of immune response proteins | 11 | 7.14e-03 | 1.94e-02 | 0.522 | 0.139000 | 0.5030 | 4.25e-01 | 3.88e-03 |
| Abortive elongation of HIV-1 transcript in the absence of Tat | 23 | 2.22e-03 | 7.10e-03 | 0.284 | -0.088300 | 0.2700 | 4.64e-01 | 2.48e-02 |
| Retrograde neurotrophin signalling | 12 | 5.84e-04 | 2.31e-03 | 0.682 | 0.269000 | 0.6260 | 1.06e-01 | 1.73e-04 |
| FCERI mediated Ca+2 mobilization | 88 | 2.55e-10 | 5.18e-09 | 0.260 | 0.136000 | -0.2210 | 2.78e-02 | 3.34e-04 |
| FCERI mediated MAPK activation | 89 | 2.70e-10 | 5.39e-09 | 0.258 | 0.221000 | -0.1330 | 3.06e-04 | 3.02e-02 |
| WNT5A-dependent internalization of FZD2, FZD5 and ROR2 | 11 | 1.02e-04 | 4.96e-04 | 0.841 | 0.395000 | 0.7420 | 2.32e-02 | 2.01e-05 |
| GPVI-mediated activation cascade | 31 | 3.29e-05 | 1.79e-04 | 0.412 | 0.063200 | 0.4070 | 5.42e-01 | 8.70e-05 |
| Synthesis of Leukotrienes (LT) and Eoxins (EX) | 15 | 1.58e-02 | 3.65e-02 | 0.338 | -0.000913 | 0.3380 | 9.95e-01 | 2.34e-02 |
| AKT phosphorylates targets in the cytosol | 14 | 2.16e-03 | 7.02e-03 | 0.541 | 0.176000 | 0.5110 | 2.54e-01 | 9.21e-04 |
| RHO GTPases activate CIT | 18 | 1.61e-03 | 5.48e-03 | 0.455 | 0.109000 | 0.4420 | 4.24e-01 | 1.16e-03 |
| Suppression of phagosomal maturation | 12 | 7.24e-03 | 1.95e-02 | 0.517 | 0.161000 | 0.4920 | 3.35e-01 | 3.19e-03 |
| Antigen activates B Cell Receptor (BCR) leading to generation of second messengers | 83 | 2.23e-08 | 3.13e-07 | 0.237 | 0.134000 | -0.1960 | 3.54e-02 | 2.07e-03 |
| Trafficking of GluR2-containing AMPA receptors | 12 | 4.83e-03 | 1.39e-02 | 0.554 | 0.191000 | 0.5190 | 2.52e-01 | 1.83e-03 |
| TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) | 16 | 1.06e-02 | 2.69e-02 | 0.367 | 0.038000 | 0.3650 | 7.93e-01 | 1.14e-02 |
| rRNA processing in the mitochondrion | 29 | 5.07e-04 | 2.03e-03 | 0.336 | -0.336000 | -0.0104 | 1.75e-03 | 9.22e-01 |
| Sealing of the nuclear envelope (NE) by ESCRT-III | 25 | 3.17e-05 | 1.76e-04 | 0.528 | 0.175000 | 0.4980 | 1.31e-01 | 1.60e-05 |
| BBSome-mediated cargo-targeting to cilium | 22 | 8.02e-03 | 2.12e-02 | 0.272 | 0.050800 | -0.2680 | 6.80e-01 | 2.98e-02 |
| Regulated proteolysis of p75NTR | 11 | 8.94e-03 | 2.31e-02 | 0.547 | 0.194000 | 0.5120 | 2.66e-01 | 3.27e-03 |
| Sema4D in semaphorin signaling | 22 | 3.76e-04 | 1.56e-03 | 0.475 | 0.138000 | 0.4550 | 2.64e-01 | 2.23e-04 |
| Post-chaperonin tubulin folding pathway | 19 | 5.49e-03 | 1.55e-02 | 0.367 | 0.047600 | 0.3640 | 7.19e-01 | 5.99e-03 |
| Constitutive Signaling by AKT1 E17K in Cancer | 26 | 4.24e-03 | 1.25e-02 | 0.265 | -0.053900 | 0.2590 | 6.34e-01 | 2.23e-02 |
| Regulation of glycolysis by fructose 2,6-bisphosphate metabolism | 11 | 1.86e-02 | 4.11e-02 | 0.485 | 0.149000 | 0.4610 | 3.92e-01 | 8.10e-03 |
| set | setSize | pMANOVA | p.adjustMANOVA | s.dist | s.low.CRP | s.high.CRP | p.low.CRP | p.high.CRP |
|---|---|---|---|---|---|---|---|---|
| CD22 mediated BCR regulation | 58 | 1.55e-15 | 9.58e-14 | 0.4000 | 0.197000 | -0.3480 | 9.56e-03 | 4.59e-06 |
| VLDLR internalisation and degradation | 11 | 1.28e-04 | 6.00e-04 | 0.6420 | 0.095400 | 0.6350 | 5.84e-01 | 2.66e-04 |
| Scavenging of heme from plasma | 70 | 2.16e-17 | 1.73e-15 | 0.3760 | 0.250000 | -0.2800 | 2.92e-04 | 5.05e-05 |
| Classical antibody-mediated complement activation | 68 | 7.31e-15 | 3.56e-13 | 0.3660 | 0.161000 | -0.3280 | 2.16e-02 | 2.87e-06 |
| Creation of C4 and C2 activators | 70 | 4.10e-15 | 2.43e-13 | 0.3590 | 0.174000 | -0.3140 | 1.18e-02 | 5.41e-06 |
| Pre-NOTCH Processing in Golgi | 18 | 2.80e-05 | 1.61e-04 | 0.5220 | 0.047900 | 0.5190 | 7.25e-01 | 1.36e-04 |
| tRNA processing in the mitochondrion | 32 | 1.76e-07 | 2.05e-06 | 0.4100 | -0.405000 | 0.0665 | 7.36e-05 | 5.15e-01 |
| Role of LAT2/NTAL/LAB on calcium mobilization | 73 | 4.31e-14 | 1.78e-12 | 0.3290 | 0.230000 | -0.2360 | 6.84e-04 | 4.98e-04 |
| Nucleobase biosynthesis | 13 | 1.93e-03 | 6.45e-03 | 0.4180 | 0.047300 | -0.4160 | 7.68e-01 | 9.46e-03 |
| FCGR activation | 75 | 3.32e-14 | 1.43e-12 | 0.3420 | 0.143000 | -0.3110 | 3.22e-02 | 3.24e-06 |
| Initial triggering of complement | 77 | 3.37e-14 | 1.43e-12 | 0.3320 | 0.158000 | -0.2920 | 1.65e-02 | 9.18e-06 |
| Purine ribonucleoside monophosphate biosynthesis | 10 | 1.67e-02 | 3.81e-02 | 0.3510 | 0.113000 | -0.3320 | 5.35e-01 | 6.88e-02 |
| N-Glycan antennae elongation | 13 | 4.13e-03 | 1.22e-02 | 0.3830 | -0.378000 | 0.0609 | 1.82e-02 | 7.04e-01 |
| Metabolism of amine-derived hormones | 10 | 1.80e-02 | 4.01e-02 | 0.3800 | 0.046600 | -0.3780 | 7.99e-01 | 3.87e-02 |
| Binding and Uptake of Ligands by Scavenger Receptors | 91 | 9.23e-15 | 4.34e-13 | 0.3140 | 0.280000 | -0.1420 | 3.95e-06 | 1.90e-02 |
| Pausing and recovery of Tat-mediated HIV elongation | 30 | 2.00e-05 | 1.19e-04 | 0.3250 | -0.118000 | 0.3030 | 2.64e-01 | 4.10e-03 |
| Tat-mediated HIV elongation arrest and recovery | 30 | 2.00e-05 | 1.19e-04 | 0.3250 | -0.118000 | 0.3030 | 2.64e-01 | 4.10e-03 |
| Class C/3 (Metabotropic glutamate/pheromone receptors) | 11 | 1.20e-02 | 2.94e-02 | 0.3980 | 0.016700 | -0.3980 | 9.24e-01 | 2.23e-02 |
| Regulation of TP53 Activity through Acetylation | 29 | 8.63e-06 | 5.77e-05 | 0.4000 | -0.400000 | 0.0133 | 1.92e-04 | 9.01e-01 |
| ERKs are inactivated | 13 | 1.09e-03 | 3.94e-03 | 0.5450 | 0.121000 | 0.5310 | 4.49e-01 | 9.15e-04 |
| Endosomal/Vacuolar pathway | 12 | 1.28e-02 | 3.11e-02 | 0.3650 | -0.363000 | 0.0386 | 2.95e-02 | 8.17e-01 |
| HIV elongation arrest and recovery | 32 | 2.99e-05 | 1.68e-04 | 0.3080 | -0.115000 | 0.2850 | 2.59e-01 | 5.25e-03 |
| Pausing and recovery of HIV elongation | 32 | 2.99e-05 | 1.68e-04 | 0.3080 | -0.115000 | 0.2850 | 2.59e-01 | 5.25e-03 |
| Role of phospholipids in phagocytosis | 87 | 3.18e-12 | 9.22e-11 | 0.2900 | 0.135000 | -0.2570 | 3.01e-02 | 3.51e-05 |
| WNT5A-dependent internalization of FZD4 | 13 | 9.68e-04 | 3.58e-03 | 0.5780 | 0.165000 | 0.5540 | 3.02e-01 | 5.46e-04 |
| Regulation of Complement cascade | 93 | 1.56e-12 | 4.61e-11 | 0.2740 | 0.203000 | -0.1850 | 7.10e-04 | 2.09e-03 |
| Complement cascade | 97 | 1.56e-12 | 4.61e-11 | 0.2690 | 0.201000 | -0.1790 | 6.33e-04 | 2.33e-03 |
| HDMs demethylate histones | 22 | 1.45e-03 | 5.03e-03 | 0.3250 | -0.044400 | 0.3220 | 7.19e-01 | 8.96e-03 |
| SUMOylation of immune response proteins | 11 | 7.14e-03 | 1.94e-02 | 0.5220 | 0.139000 | 0.5030 | 4.25e-01 | 3.88e-03 |
| Abortive elongation of HIV-1 transcript in the absence of Tat | 23 | 2.22e-03 | 7.10e-03 | 0.2840 | -0.088300 | 0.2700 | 4.64e-01 | 2.48e-02 |
| Retrograde neurotrophin signalling | 12 | 5.84e-04 | 2.31e-03 | 0.6820 | 0.269000 | 0.6260 | 1.06e-01 | 1.73e-04 |
| FCERI mediated Ca+2 mobilization | 88 | 2.55e-10 | 5.18e-09 | 0.2600 | 0.136000 | -0.2210 | 2.78e-02 | 3.34e-04 |
| FCERI mediated MAPK activation | 89 | 2.70e-10 | 5.39e-09 | 0.2580 | 0.221000 | -0.1330 | 3.06e-04 | 3.02e-02 |
| WNT5A-dependent internalization of FZD2, FZD5 and ROR2 | 11 | 1.02e-04 | 4.96e-04 | 0.8410 | 0.395000 | 0.7420 | 2.32e-02 | 2.01e-05 |
| GPVI-mediated activation cascade | 31 | 3.29e-05 | 1.79e-04 | 0.4120 | 0.063200 | 0.4070 | 5.42e-01 | 8.70e-05 |
| Synthesis of Leukotrienes (LT) and Eoxins (EX) | 15 | 1.58e-02 | 3.65e-02 | 0.3380 | -0.000913 | 0.3380 | 9.95e-01 | 2.34e-02 |
| AKT phosphorylates targets in the cytosol | 14 | 2.16e-03 | 7.02e-03 | 0.5410 | 0.176000 | 0.5110 | 2.54e-01 | 9.21e-04 |
| RHO GTPases activate CIT | 18 | 1.61e-03 | 5.48e-03 | 0.4550 | 0.109000 | 0.4420 | 4.24e-01 | 1.16e-03 |
| Suppression of phagosomal maturation | 12 | 7.24e-03 | 1.95e-02 | 0.5170 | 0.161000 | 0.4920 | 3.35e-01 | 3.19e-03 |
| Antigen activates B Cell Receptor (BCR) leading to generation of second messengers | 83 | 2.23e-08 | 3.13e-07 | 0.2370 | 0.134000 | -0.1960 | 3.54e-02 | 2.07e-03 |
| Trafficking of GluR2-containing AMPA receptors | 12 | 4.83e-03 | 1.39e-02 | 0.5540 | 0.191000 | 0.5190 | 2.52e-01 | 1.83e-03 |
| TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) | 16 | 1.06e-02 | 2.69e-02 | 0.3670 | 0.038000 | 0.3650 | 7.93e-01 | 1.14e-02 |
| rRNA processing in the mitochondrion | 29 | 5.07e-04 | 2.03e-03 | 0.3360 | -0.336000 | -0.0104 | 1.75e-03 | 9.22e-01 |
| Sealing of the nuclear envelope (NE) by ESCRT-III | 25 | 3.17e-05 | 1.76e-04 | 0.5280 | 0.175000 | 0.4980 | 1.31e-01 | 1.60e-05 |
| BBSome-mediated cargo-targeting to cilium | 22 | 8.02e-03 | 2.12e-02 | 0.2720 | 0.050800 | -0.2680 | 6.80e-01 | 2.98e-02 |
| Regulated proteolysis of p75NTR | 11 | 8.94e-03 | 2.31e-02 | 0.5470 | 0.194000 | 0.5120 | 2.66e-01 | 3.27e-03 |
| Sema4D in semaphorin signaling | 22 | 3.76e-04 | 1.56e-03 | 0.4750 | 0.138000 | 0.4550 | 2.64e-01 | 2.23e-04 |
| Post-chaperonin tubulin folding pathway | 19 | 5.49e-03 | 1.55e-02 | 0.3670 | 0.047600 | 0.3640 | 7.19e-01 | 5.99e-03 |
| Constitutive Signaling by AKT1 E17K in Cancer | 26 | 4.24e-03 | 1.25e-02 | 0.2650 | -0.053900 | 0.2590 | 6.34e-01 | 2.23e-02 |
| Regulation of glycolysis by fructose 2,6-bisphosphate metabolism | 11 | 1.86e-02 | 4.11e-02 | 0.4850 | 0.149000 | 0.4610 | 3.92e-01 | 8.10e-03 |
| FCGR3A-mediated IL10 synthesis | 98 | 8.66e-09 | 1.33e-07 | 0.2240 | 0.124000 | -0.1870 | 3.37e-02 | 1.40e-03 |
| Platelet sensitization by LDL | 16 | 1.20e-04 | 5.68e-04 | 0.6750 | 0.298000 | 0.6060 | 3.92e-02 | 2.69e-05 |
| Gap junction trafficking | 13 | 8.55e-04 | 3.26e-03 | 0.6600 | 0.288000 | 0.5940 | 7.20e-02 | 2.08e-04 |
| Recycling pathway of L1 | 26 | 6.08e-05 | 3.13e-04 | 0.5070 | 0.174000 | 0.4760 | 1.24e-01 | 2.65e-05 |
| N-glycan antennae elongation in the medial/trans-Golgi | 21 | 2.00e-02 | 4.37e-02 | 0.2380 | -0.227000 | 0.0733 | 7.20e-02 | 5.61e-01 |
| TNFs bind their physiological receptors | 25 | 1.15e-02 | 2.85e-02 | 0.2240 | 0.097000 | -0.2020 | 4.01e-01 | 8.11e-02 |
| Signaling by WNT in cancer | 30 | 5.11e-03 | 1.46e-02 | 0.2220 | -0.095900 | 0.2000 | 3.63e-01 | 5.76e-02 |
| Misspliced GSK3beta mutants stabilize beta-catenin | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| S33 mutants of beta-catenin aren't phosphorylated | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| S37 mutants of beta-catenin aren't phosphorylated | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| S45 mutants of beta-catenin aren't phosphorylated | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| T41 mutants of beta-catenin aren't phosphorylated | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| phosphorylation site mutants of CTNNB1 are not targeted to the proteasome by the destruction complex | 15 | 1.74e-02 | 3.92e-02 | 0.3900 | 0.086400 | 0.3810 | 5.62e-01 | 1.07e-02 |
| TBC/RABGAPs | 45 | 5.00e-06 | 3.55e-05 | 0.3970 | 0.095000 | 0.3850 | 2.70e-01 | 7.65e-06 |
| Initiation of Nuclear Envelope (NE) Reformation | 19 | 1.31e-02 | 3.18e-02 | 0.3330 | 0.040000 | 0.3310 | 7.63e-01 | 1.26e-02 |
| Translation of structural proteins | 28 | 8.61e-03 | 2.26e-02 | 0.2300 | -0.065600 | 0.2200 | 5.48e-01 | 4.40e-02 |
| PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases | 13 | 9.94e-04 | 3.65e-03 | 0.6690 | 0.312000 | 0.5920 | 5.14e-02 | 2.19e-04 |
| EGFR downregulation | 26 | 1.85e-05 | 1.12e-04 | 0.5720 | 0.240000 | 0.5190 | 3.39e-02 | 4.58e-06 |
| RHO GTPases Activate ROCKs | 18 | 8.93e-05 | 4.43e-04 | 0.6630 | 0.313000 | 0.5850 | 2.13e-02 | 1.74e-05 |
| Sema4D induced cell migration and growth-cone collapse | 19 | 2.65e-03 | 8.20e-03 | 0.4680 | 0.167000 | 0.4380 | 2.08e-01 | 9.58e-04 |
| Citric acid cycle (TCA cycle) | 22 | 5.38e-03 | 1.53e-02 | 0.3740 | 0.093500 | 0.3630 | 4.48e-01 | 3.24e-03 |
| RHO GTPases activate PAKs | 20 | 1.98e-04 | 8.89e-04 | 0.5870 | 0.260000 | 0.5270 | 4.44e-02 | 4.49e-05 |
| Mucopolysaccharidoses | 11 | 6.64e-03 | 1.82e-02 | 0.6150 | 0.282000 | 0.5470 | 1.06e-01 | 1.68e-03 |
| Beta-catenin phosphorylation cascade | 17 | 4.40e-03 | 1.28e-02 | 0.4820 | 0.182000 | 0.4460 | 1.94e-01 | 1.44e-03 |
| NOTCH4 Activation and Transmission of Signal to the Nucleus | 10 | 3.92e-03 | 1.17e-02 | 0.6990 | 0.346000 | 0.6070 | 5.78e-02 | 8.88e-04 |
| Uptake and function of anthrax toxins | 10 | 1.57e-04 | 7.16e-04 | 0.9150 | 0.505000 | 0.7630 | 5.68e-03 | 2.93e-05 |
| UCH proteinases | 86 | 8.05e-08 | 9.80e-07 | 0.3190 | 0.059300 | 0.3140 | 3.42e-01 | 4.96e-07 |
| XBP1(S) activates chaperone genes | 47 | 5.47e-05 | 2.87e-04 | 0.3530 | 0.090400 | 0.3410 | 2.84e-01 | 5.16e-05 |
| Advanced glycosylation endproduct receptor signaling | 12 | 2.24e-04 | 9.88e-04 | 0.8090 | 0.432000 | 0.6830 | 9.49e-03 | 4.15e-05 |
| Spry regulation of FGF signaling | 16 | 1.29e-03 | 4.55e-03 | 0.5920 | 0.276000 | 0.5230 | 5.63e-02 | 2.88e-04 |
| Disassembly of the destruction complex and recruitment of AXIN to the membrane | 29 | 1.38e-03 | 4.85e-03 | 0.3830 | 0.118000 | 0.3650 | 2.72e-01 | 6.70e-04 |
| IRE1alpha activates chaperones | 49 | 5.77e-05 | 3.00e-04 | 0.3430 | 0.085100 | 0.3320 | 3.02e-01 | 5.79e-05 |
| Assembly Of The HIV Virion | 15 | 7.55e-03 | 2.02e-02 | 0.5050 | 0.212000 | 0.4580 | 1.54e-01 | 2.14e-03 |
| RORA activates gene expression | 18 | 1.54e-02 | 3.57e-02 | 0.3970 | 0.135000 | 0.3740 | 3.23e-01 | 6.01e-03 |
| ERK/MAPK targets | 22 | 1.23e-03 | 4.36e-03 | 0.4880 | 0.205000 | 0.4430 | 9.63e-02 | 3.25e-04 |
| Metabolism of Angiotensinogen to Angiotensins | 11 | 8.86e-03 | 2.29e-02 | 0.6120 | 0.534000 | 0.3000 | 2.16e-03 | 8.52e-02 |
| PKA activation in glucagon signalling | 14 | 2.06e-02 | 4.47e-02 | 0.4600 | 0.186000 | 0.4200 | 2.28e-01 | 6.47e-03 |
| Activated NOTCH1 Transmits Signal to the Nucleus | 27 | 6.24e-03 | 1.71e-02 | 0.3400 | 0.093900 | 0.3270 | 3.98e-01 | 3.26e-03 |
| SARS-CoV-1 Infection | 47 | 3.48e-04 | 1.47e-03 | 0.3100 | 0.069200 | 0.3020 | 4.12e-01 | 3.38e-04 |
| Processive synthesis on the lagging strand | 15 | 1.12e-02 | 2.79e-02 | 0.4860 | -0.207000 | -0.4400 | 1.65e-01 | 3.20e-03 |
| Membrane binding and targetting of GAG proteins | 13 | 1.40e-02 | 3.34e-02 | 0.5170 | 0.231000 | 0.4630 | 1.50e-01 | 3.85e-03 |
| Synthesis And Processing Of GAG, GAGPOL Polyproteins | 13 | 1.40e-02 | 3.34e-02 | 0.5170 | 0.231000 | 0.4630 | 1.50e-01 | 3.85e-03 |
| Heparan sulfate/heparin (HS-GAG) metabolism | 37 | 1.07e-02 | 2.71e-02 | 0.2160 | -0.016800 | 0.2150 | 8.60e-01 | 2.37e-02 |
| Budding and maturation of HIV virion | 26 | 4.82e-06 | 3.46e-05 | 0.6510 | 0.331000 | 0.5600 | 3.46e-03 | 7.57e-07 |
| N-glycan trimming in the ER and Calnexin/Calreticulin cycle | 35 | 2.44e-04 | 1.07e-03 | 0.4160 | 0.157000 | 0.3850 | 1.09e-01 | 8.04e-05 |
| BMAL1:CLOCK,NPAS2 activates circadian gene expression | 25 | 2.22e-02 | 4.79e-02 | 0.2850 | 0.052000 | 0.2800 | 6.53e-01 | 1.54e-02 |
| Erythropoietin activates Phosphoinositide-3-kinase (PI3K) | 11 | 1.48e-02 | 3.47e-02 | 0.5740 | 0.276000 | 0.5040 | 1.13e-01 | 3.83e-03 |
| MAP3K8 (TPL2)-dependent MAPK1/3 activation | 16 | 1.66e-02 | 3.78e-02 | 0.4400 | 0.176000 | 0.4030 | 2.24e-01 | 5.24e-03 |
| NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux | 32 | 1.08e-02 | 2.71e-02 | 0.2650 | 0.035100 | 0.2620 | 7.31e-01 | 1.02e-02 |
| Formation of HIV-1 elongation complex containing HIV-1 Tat | 42 | 8.76e-03 | 2.27e-02 | 0.1980 | -0.031200 | 0.1960 | 7.27e-01 | 2.81e-02 |
| HIV Transcription Elongation | 42 | 8.76e-03 | 2.27e-02 | 0.1980 | -0.031200 | 0.1960 | 7.27e-01 | 2.81e-02 |
| Tat-mediated elongation of the HIV-1 transcript | 42 | 8.76e-03 | 2.27e-02 | 0.1980 | -0.031200 | 0.1960 | 7.27e-01 | 2.81e-02 |
| Gap junction trafficking and regulation | 15 | 1.28e-02 | 3.11e-02 | 0.4800 | 0.207000 | 0.4340 | 1.65e-01 | 3.64e-03 |
| Formation of ATP by chemiosmotic coupling | 18 | 1.89e-03 | 6.36e-03 | 0.5430 | 0.255000 | 0.4790 | 6.12e-02 | 4.28e-04 |
| Inhibition of DNA recombination at telomere | 35 | 1.01e-04 | 4.91e-04 | 0.4510 | 0.186000 | 0.4110 | 5.63e-02 | 2.63e-05 |
| NOTCH3 Activation and Transmission of Signal to the Nucleus | 23 | 1.62e-02 | 3.71e-02 | 0.3380 | 0.099800 | 0.3230 | 4.07e-01 | 7.41e-03 |
| Insertion of tail-anchored proteins into the endoplasmic reticulum membrane | 22 | 2.11e-03 | 6.95e-03 | 0.4720 | 0.204000 | 0.4260 | 9.81e-02 | 5.43e-04 |
| SUMOylation of intracellular receptors | 25 | 2.26e-02 | 4.86e-02 | 0.2910 | 0.062300 | 0.2840 | 5.90e-01 | 1.39e-02 |
| Formation of HIV elongation complex in the absence of HIV Tat | 44 | 9.38e-03 | 2.41e-02 | 0.1910 | -0.033200 | 0.1880 | 7.03e-01 | 3.11e-02 |
| tRNA modification in the nucleus and cytosol | 43 | 1.42e-03 | 4.92e-03 | 0.2940 | -0.066000 | -0.2870 | 4.54e-01 | 1.14e-03 |
| Transport of the SLBP Dependant Mature mRNA | 36 | 1.16e-02 | 2.87e-02 | 0.2360 | -0.014800 | -0.2350 | 8.78e-01 | 1.45e-02 |
| HDACs deacetylate histones | 47 | 2.10e-06 | 1.78e-05 | 0.4730 | 0.206000 | 0.4250 | 1.45e-02 | 4.54e-07 |
| Metabolism of non-coding RNA | 53 | 1.19e-03 | 4.23e-03 | 0.2460 | -0.025600 | -0.2450 | 7.48e-01 | 2.07e-03 |
| snRNP Assembly | 53 | 1.19e-03 | 4.23e-03 | 0.2460 | -0.025600 | -0.2450 | 7.48e-01 | 2.07e-03 |
| DARPP-32 events | 22 | 1.24e-03 | 4.38e-03 | 0.5010 | 0.228000 | 0.4470 | 6.45e-02 | 2.87e-04 |
| PCP/CE pathway | 86 | 1.48e-08 | 2.16e-07 | 0.3890 | 0.145000 | 0.3610 | 2.01e-02 | 6.83e-09 |
| Transport of the SLBP independent Mature mRNA | 35 | 1.02e-02 | 2.59e-02 | 0.2580 | -0.038800 | -0.2550 | 6.91e-01 | 9.00e-03 |
| Glycosphingolipid metabolism | 36 | 2.13e-03 | 6.95e-03 | 0.3310 | 0.099600 | 0.3160 | 3.01e-01 | 1.04e-03 |
| NR1H2 and NR1H3-mediated signaling | 38 | 6.03e-03 | 1.68e-02 | 0.2690 | 0.050800 | 0.2640 | 5.88e-01 | 4.84e-03 |
| Gluconeogenesis | 28 | 8.56e-03 | 2.25e-02 | 0.3330 | 0.104000 | 0.3170 | 3.41e-01 | 3.74e-03 |
| Transcriptional regulation of white adipocyte differentiation | 77 | 1.97e-06 | 1.71e-05 | 0.3350 | 0.105000 | 0.3180 | 1.10e-01 | 1.41e-06 |
| Complex I biogenesis | 55 | 1.14e-04 | 5.43e-04 | 0.3280 | 0.102000 | 0.3120 | 1.91e-01 | 6.26e-05 |
| Notch-HLH transcription pathway | 28 | 2.62e-04 | 1.14e-03 | 0.4970 | 0.231000 | 0.4400 | 3.44e-02 | 5.46e-05 |
| GAB1 signalosome | 14 | 7.36e-03 | 1.97e-02 | 0.5550 | 0.273000 | 0.4830 | 7.65e-02 | 1.76e-03 |
| SARS-CoV-2 Infection | 63 | 2.45e-05 | 1.42e-04 | 0.3360 | 0.110000 | 0.3180 | 1.32e-01 | 1.30e-05 |
| NEP/NS2 Interacts with the Cellular Export Machinery | 32 | 7.05e-03 | 1.92e-02 | 0.3130 | -0.092100 | -0.2990 | 3.67e-01 | 3.37e-03 |
| Glycosaminoglycan metabolism | 92 | 1.53e-05 | 9.32e-05 | 0.2480 | 0.038200 | 0.2450 | 5.26e-01 | 4.75e-05 |
| Nuclear Events (kinase and transcription factor activation) | 53 | 2.93e-05 | 1.66e-04 | 0.3810 | 0.146000 | 0.3520 | 6.56e-02 | 9.45e-06 |
| TGF-beta receptor signaling activates SMADs | 32 | 6.08e-03 | 1.69e-02 | 0.3250 | 0.104000 | 0.3080 | 3.08e-01 | 2.58e-03 |
| Endosomal Sorting Complex Required For Transport (ESCRT) | 29 | 2.76e-06 | 2.20e-05 | 0.6400 | 0.339000 | 0.5430 | 1.56e-03 | 4.21e-07 |
| Signaling by Erythropoietin | 24 | 1.78e-03 | 6.04e-03 | 0.4680 | 0.213000 | 0.4160 | 7.02e-02 | 4.18e-04 |
| Cellular response to hypoxia | 71 | 1.53e-09 | 2.64e-08 | 0.4930 | 0.233000 | 0.4350 | 6.98e-04 | 2.31e-10 |
| Regulation of actin dynamics for phagocytic cup formation | 122 | 7.10e-08 | 8.80e-07 | 0.2840 | 0.275000 | 0.0726 | 1.59e-07 | 1.66e-01 |
| FCGR3A-mediated phagocytosis | 120 | 5.89e-07 | 5.95e-06 | 0.2550 | 0.250000 | 0.0490 | 2.26e-06 | 3.54e-01 |
| Leishmania phagocytosis | 120 | 5.89e-07 | 5.95e-06 | 0.2550 | 0.250000 | 0.0490 | 2.26e-06 | 3.54e-01 |
| Parasite infection | 120 | 5.89e-07 | 5.95e-06 | 0.2550 | 0.250000 | 0.0490 | 2.26e-06 | 3.54e-01 |
| Formation of RNA Pol II elongation complex | 57 | 2.23e-03 | 7.10e-03 | 0.2260 | 0.024200 | 0.2250 | 7.52e-01 | 3.30e-03 |
| RNA Polymerase II Transcription Elongation | 57 | 2.23e-03 | 7.10e-03 | 0.2260 | 0.024200 | 0.2250 | 7.52e-01 | 3.30e-03 |
| Export of Viral Ribonucleoproteins from Nucleus | 33 | 1.43e-02 | 3.39e-02 | 0.2730 | -0.064400 | -0.2650 | 5.22e-01 | 8.40e-03 |
| Calnexin/calreticulin cycle | 26 | 1.01e-03 | 3.68e-03 | 0.4720 | 0.219000 | 0.4180 | 5.33e-02 | 2.25e-04 |
| ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression | 32 | 4.24e-03 | 1.25e-02 | 0.3480 | 0.126000 | 0.3240 | 2.18e-01 | 1.49e-03 |
| Regulation of PTEN stability and activity | 66 | 2.07e-07 | 2.37e-06 | 0.4350 | 0.192000 | 0.3900 | 7.10e-03 | 4.23e-08 |
| Lagging Strand Synthesis | 20 | 2.17e-03 | 7.03e-03 | 0.5180 | -0.254000 | -0.4510 | 4.97e-02 | 4.74e-04 |
| Negative regulation of MAPK pathway | 42 | 8.70e-03 | 2.27e-02 | 0.2460 | 0.045600 | 0.2420 | 6.09e-01 | 6.75e-03 |
| Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 | 22 | 1.02e-04 | 4.96e-04 | 0.6240 | 0.333000 | 0.5280 | 6.91e-03 | 1.82e-05 |
| Synthesis of PIPs at the plasma membrane | 52 | 4.81e-03 | 1.39e-02 | 0.2240 | 0.027800 | 0.2220 | 7.29e-01 | 5.54e-03 |
| RAF activation | 32 | 3.57e-04 | 1.49e-03 | 0.4550 | 0.210000 | 0.4040 | 4.01e-02 | 7.66e-05 |
| PPARA activates gene expression | 104 | 3.49e-09 | 5.66e-08 | 0.3770 | 0.152000 | 0.3460 | 7.52e-03 | 1.13e-09 |
| Regulation of lipid metabolism by PPARalpha | 106 | 8.95e-09 | 1.35e-07 | 0.3590 | 0.138000 | 0.3320 | 1.42e-02 | 3.61e-09 |
| Signaling by NOTCH3 | 42 | 2.36e-03 | 7.39e-03 | 0.3090 | 0.099300 | 0.2930 | 2.66e-01 | 1.03e-03 |
| ER-Phagosome pathway | 82 | 5.95e-10 | 1.05e-08 | 0.4690 | 0.221000 | 0.4140 | 5.53e-04 | 9.00e-11 |
| Diseases of carbohydrate metabolism | 29 | 9.92e-04 | 3.65e-03 | 0.4440 | 0.203000 | 0.3960 | 5.89e-02 | 2.26e-04 |
| Cargo recognition for clathrin-mediated endocytosis | 88 | 4.01e-09 | 6.43e-08 | 0.4220 | 0.187000 | 0.3790 | 2.47e-03 | 8.01e-10 |
| RHO GTPases activate PKNs | 47 | 4.15e-09 | 6.57e-08 | 0.6200 | 0.332000 | 0.5230 | 8.24e-05 | 5.25e-10 |
| Clathrin-mediated endocytosis | 125 | 8.48e-14 | 2.96e-12 | 0.4500 | 0.208000 | 0.3990 | 6.07e-05 | 1.32e-14 |
| Activation of HOX genes during differentiation | 69 | 3.21e-04 | 1.37e-03 | 0.2600 | 0.062300 | 0.2530 | 3.71e-01 | 2.80e-04 |
| Activation of anterior HOX genes in hindbrain development during early embryogenesis | 69 | 3.21e-04 | 1.37e-03 | 0.2600 | 0.062300 | 0.2530 | 3.71e-01 | 2.80e-04 |
| Signaling by EGFR | 45 | 1.13e-04 | 5.43e-04 | 0.4000 | 0.171000 | 0.3610 | 4.71e-02 | 2.73e-05 |
| Packaging Of Telomere Ends | 20 | 8.41e-04 | 3.23e-03 | 0.5690 | 0.297000 | 0.4860 | 2.16e-02 | 1.68e-04 |
| Glycogen breakdown (glycogenolysis) | 13 | 1.78e-02 | 3.97e-02 | 0.5260 | 0.265000 | 0.4540 | 9.75e-02 | 4.56e-03 |
| RHO GTPases activate IQGAPs | 11 | 1.38e-02 | 3.31e-02 | 0.6020 | 0.321000 | 0.5090 | 6.52e-02 | 3.43e-03 |
| Vpr-mediated nuclear import of PICs | 34 | 1.09e-02 | 2.74e-02 | 0.2950 | -0.092100 | -0.2800 | 3.53e-01 | 4.72e-03 |
| FCERI mediated NF-kB activation | 136 | 2.60e-06 | 2.11e-05 | 0.2150 | 0.213000 | 0.0258 | 1.74e-05 | 6.04e-01 |
| activated TAK1 mediates p38 MAPK activation | 19 | 9.67e-04 | 3.58e-03 | 0.5810 | 0.306000 | 0.4940 | 2.09e-02 | 1.95e-04 |
| CD28 dependent PI3K/Akt signaling | 22 | 4.85e-03 | 1.39e-02 | 0.4540 | -0.400000 | -0.2140 | 1.16e-03 | 8.26e-02 |
| Rab regulation of trafficking | 120 | 7.63e-10 | 1.33e-08 | 0.3660 | 0.148000 | 0.3340 | 4.99e-03 | 2.43e-10 |
| Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha | 64 | 9.91e-08 | 1.18e-06 | 0.4660 | 0.223000 | 0.4090 | 2.03e-03 | 1.54e-08 |
| Interferon alpha/beta signaling | 57 | 4.21e-06 | 3.12e-05 | 0.4230 | -0.377000 | -0.1920 | 8.21e-07 | 1.23e-02 |
| Asymmetric localization of PCP proteins | 60 | 6.21e-05 | 3.18e-04 | 0.3450 | 0.133000 | 0.3190 | 7.40e-02 | 1.95e-05 |
| Regulation of cholesterol biosynthesis by SREBP (SREBF) | 55 | 1.46e-04 | 6.72e-04 | 0.3440 | 0.133000 | 0.3180 | 8.82e-02 | 4.55e-05 |
| rRNA modification in the nucleus and cytosol | 59 | 5.77e-06 | 4.03e-05 | 0.4070 | -0.180000 | -0.3650 | 1.65e-02 | 1.21e-06 |
| Inflammasomes | 20 | 1.93e-04 | 8.69e-04 | 0.6380 | 0.533000 | 0.3490 | 3.62e-05 | 6.81e-03 |
| Regulation of IFNG signaling | 14 | 1.74e-02 | 3.92e-02 | 0.5080 | 0.255000 | 0.4390 | 9.85e-02 | 4.47e-03 |
| VxPx cargo-targeting to cilium | 19 | 1.99e-02 | 4.36e-02 | 0.4100 | 0.184000 | 0.3670 | 1.66e-01 | 5.62e-03 |
| Cell surface interactions at the vascular wall | 172 | 5.16e-08 | 6.64e-07 | 0.2290 | 0.225000 | 0.0418 | 3.63e-07 | 3.44e-01 |
| Regulation of RUNX3 expression and activity | 55 | 2.63e-05 | 1.52e-04 | 0.3920 | 0.170000 | 0.3530 | 2.90e-02 | 5.93e-06 |
| Interactions of Rev with host cellular proteins | 37 | 4.06e-03 | 1.21e-02 | 0.3270 | -0.121000 | -0.3040 | 2.01e-01 | 1.37e-03 |
| Senescence-Associated Secretory Phenotype (SASP) | 66 | 4.21e-06 | 3.12e-05 | 0.3860 | 0.166000 | 0.3490 | 1.96e-02 | 9.59e-07 |
| Defective CFTR causes cystic fibrosis | 58 | 2.79e-07 | 3.15e-06 | 0.4780 | 0.235000 | 0.4160 | 2.00e-03 | 4.20e-08 |
| Activation of gene expression by SREBF (SREBP) | 42 | 2.13e-03 | 6.96e-03 | 0.3250 | 0.120000 | 0.3020 | 1.77e-01 | 7.19e-04 |
| Detoxification of Reactive Oxygen Species | 31 | 5.24e-08 | 6.67e-07 | 0.7280 | 0.417000 | 0.5970 | 5.93e-05 | 8.44e-09 |
| Antigen processing-Cross presentation | 97 | 7.58e-13 | 2.40e-11 | 0.5090 | 0.258000 | 0.4380 | 1.08e-05 | 8.20e-14 |
| COPI-mediated anterograde transport | 78 | 2.53e-10 | 5.18e-09 | 0.5040 | 0.255000 | 0.4350 | 9.81e-05 | 3.06e-11 |
| Degradation of DVL | 54 | 2.36e-06 | 1.95e-05 | 0.4550 | 0.219000 | 0.3990 | 5.32e-03 | 3.92e-07 |
| Glycogen metabolism | 23 | 5.14e-03 | 1.46e-02 | 0.4420 | 0.210000 | 0.3890 | 8.13e-02 | 1.23e-03 |
| Signal transduction by L1 | 20 | 5.68e-04 | 2.26e-03 | 0.5930 | 0.320000 | 0.4990 | 1.31e-02 | 1.12e-04 |
| PI Metabolism | 79 | 1.92e-03 | 6.42e-03 | 0.1860 | 0.007670 | 0.1860 | 9.06e-01 | 4.24e-03 |
| Cleavage of the damaged purine | 24 | 3.69e-03 | 1.11e-02 | 0.4480 | 0.215000 | 0.3930 | 6.81e-02 | 8.54e-04 |
| Depurination | 24 | 3.69e-03 | 1.11e-02 | 0.4480 | 0.215000 | 0.3930 | 6.81e-02 | 8.54e-04 |
| Recognition and association of DNA glycosylase with site containing an affected purine | 24 | 3.69e-03 | 1.11e-02 | 0.4480 | 0.215000 | 0.3930 | 6.81e-02 | 8.54e-04 |
| Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC) | 31 | 1.69e-02 | 3.84e-02 | 0.3020 | -0.105000 | -0.2830 | 3.10e-01 | 6.34e-03 |
| Regulation of Glucokinase by Glucokinase Regulatory Protein | 31 | 1.69e-02 | 3.84e-02 | 0.3020 | -0.105000 | -0.2830 | 3.10e-01 | 6.34e-03 |
| Rev-mediated nuclear export of HIV RNA | 35 | 5.52e-03 | 1.55e-02 | 0.3320 | -0.129000 | -0.3060 | 1.87e-01 | 1.74e-03 |
| Transport to the Golgi and subsequent modification | 155 | 7.98e-14 | 2.86e-12 | 0.4010 | 0.181000 | 0.3580 | 9.86e-05 | 1.43e-14 |
| TAK1 activates NFkB by phosphorylation and activation of IKKs complex | 27 | 1.43e-03 | 4.97e-03 | 0.4600 | 0.226000 | 0.4010 | 4.24e-02 | 3.06e-04 |
| TP53 Regulates Transcription of DNA Repair Genes | 61 | 2.11e-02 | 4.58e-02 | 0.1430 | -0.139000 | 0.0344 | 6.11e-02 | 6.43e-01 |
| Chromatin modifying enzymes | 217 | 1.75e-06 | 1.54e-05 | 0.1370 | -0.041900 | 0.1310 | 2.87e-01 | 9.16e-04 |
| Chromatin organization | 217 | 1.75e-06 | 1.54e-05 | 0.1370 | -0.041900 | 0.1310 | 2.87e-01 | 9.16e-04 |
| G beta:gamma signalling through PI3Kgamma | 22 | 2.28e-02 | 4.89e-02 | 0.3710 | 0.162000 | 0.3340 | 1.90e-01 | 6.69e-03 |
| Effects of PIP2 hydrolysis | 24 | 7.32e-03 | 1.97e-02 | 0.4170 | -0.368000 | -0.1960 | 1.82e-03 | 9.66e-02 |
| ER to Golgi Anterograde Transport | 129 | 4.52e-15 | 2.51e-13 | 0.4800 | 0.242000 | 0.4140 | 1.99e-06 | 4.59e-16 |
| Negative regulation of NOTCH4 signaling | 54 | 3.14e-06 | 2.48e-05 | 0.4540 | 0.224000 | 0.3950 | 4.45e-03 | 5.04e-07 |
| IRAK1 recruits IKK complex | 10 | 8.10e-03 | 2.14e-02 | 0.6870 | 0.393000 | 0.5640 | 3.12e-02 | 2.02e-03 |
| IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation | 10 | 8.10e-03 | 2.14e-02 | 0.6870 | 0.393000 | 0.5640 | 3.12e-02 | 2.02e-03 |
| Late endosomal microautophagy | 29 | 1.23e-04 | 5.81e-04 | 0.5370 | 0.286000 | 0.4550 | 7.78e-03 | 2.21e-05 |
| Nuclear import of Rev protein | 34 | 1.41e-02 | 3.35e-02 | 0.2990 | -0.109000 | -0.2780 | 2.71e-01 | 4.97e-03 |
| COPII-mediated vesicle transport | 65 | 2.79e-08 | 3.81e-07 | 0.4930 | 0.254000 | 0.4230 | 4.00e-04 | 3.70e-09 |
| Regulation of activated PAK-2p34 by proteasome mediated degradation | 48 | 3.81e-06 | 2.92e-05 | 0.4850 | 0.248000 | 0.4170 | 2.90e-03 | 5.90e-07 |
| Phase 0 - rapid depolarisation | 22 | 1.53e-02 | 3.56e-02 | 0.4000 | -0.354000 | -0.1860 | 4.07e-03 | 1.32e-01 |
| MAP kinase activation | 63 | 3.08e-07 | 3.44e-06 | 0.4610 | 0.231000 | 0.3980 | 1.51e-03 | 4.49e-08 |
| trans-Golgi Network Vesicle Budding | 69 | 2.75e-08 | 3.79e-07 | 0.4770 | 0.243000 | 0.4100 | 4.71e-04 | 3.67e-09 |
| Signaling by NOTCH4 | 78 | 7.97e-08 | 9.79e-07 | 0.4260 | 0.206000 | 0.3730 | 1.65e-03 | 1.20e-08 |
| FBXL7 down-regulates AURKA during mitotic entry and in early mitosis | 52 | 8.37e-06 | 5.62e-05 | 0.4450 | 0.220000 | 0.3870 | 6.06e-03 | 1.39e-06 |
| Presynaptic phase of homologous DNA pairing and strand exchange | 39 | 7.73e-04 | 2.99e-03 | 0.3920 | -0.181000 | -0.3480 | 5.05e-02 | 1.71e-04 |
| Pre-NOTCH Expression and Processing | 65 | 6.05e-07 | 6.05e-06 | 0.4400 | 0.216000 | 0.3830 | 2.55e-03 | 9.27e-08 |
| TRAF6 mediated NF-kB activation | 23 | 1.83e-02 | 4.07e-02 | 0.3780 | 0.171000 | 0.3370 | 1.55e-01 | 5.08e-03 |
| COPI-independent Golgi-to-ER retrograde traffic | 33 | 2.25e-08 | 3.13e-07 | 0.7290 | 0.426000 | 0.5920 | 2.29e-05 | 4.03e-09 |
| Cross-presentation of soluble exogenous antigens (endosomes) | 47 | 1.71e-06 | 1.52e-05 | 0.5110 | 0.269000 | 0.4340 | 1.42e-03 | 2.56e-07 |
| Hh mutants that don't undergo autocatalytic processing are degraded by ERAD | 53 | 6.09e-07 | 6.05e-06 | 0.4980 | 0.259000 | 0.4250 | 1.09e-03 | 8.79e-08 |
| Regulation of RAS by GAPs | 66 | 1.47e-04 | 6.74e-04 | 0.3170 | 0.126000 | 0.2910 | 7.69e-02 | 4.27e-05 |
| Interleukin-17 signaling | 68 | 6.70e-07 | 6.57e-06 | 0.4270 | 0.208000 | 0.3730 | 3.00e-03 | 1.05e-07 |
| Integrin signaling | 22 | 9.18e-04 | 3.45e-03 | 0.5470 | 0.296000 | 0.4600 | 1.62e-02 | 1.86e-04 |
| Ubiquitin-dependent degradation of Cyclin D | 50 | 2.81e-05 | 1.61e-04 | 0.4280 | 0.209000 | 0.3730 | 1.05e-02 | 4.95e-06 |
| PTEN Regulation | 138 | 6.97e-08 | 8.71e-07 | 0.2950 | 0.110000 | 0.2730 | 2.55e-02 | 2.96e-08 |
| PCNA-Dependent Long Patch Base Excision Repair | 21 | 6.84e-03 | 1.87e-02 | 0.4630 | -0.237000 | -0.3980 | 6.05e-02 | 1.60e-03 |
| Smooth Muscle Contraction | 30 | 2.63e-06 | 2.12e-05 | 0.6480 | 0.371000 | 0.5320 | 4.36e-04 | 4.62e-07 |
| Degradation of AXIN | 53 | 7.88e-05 | 3.95e-04 | 0.3890 | 0.183000 | 0.3430 | 2.13e-02 | 1.54e-05 |
| Base-Excision Repair, AP Site Formation | 31 | 1.43e-02 | 3.39e-02 | 0.3270 | 0.137000 | 0.2970 | 1.87e-01 | 4.23e-03 |
| Regulation of PTEN gene transcription | 59 | 3.84e-03 | 1.15e-02 | 0.2470 | 0.075400 | 0.2350 | 3.16e-01 | 1.78e-03 |
| tRNA processing in the nucleus | 59 | 1.53e-03 | 5.24e-03 | 0.2790 | -0.101000 | -0.2600 | 1.81e-01 | 5.43e-04 |
| Interleukin-1 signaling | 97 | 1.45e-14 | 6.57e-13 | 0.5610 | 0.309000 | 0.4680 | 1.50e-07 | 1.57e-15 |
| Cleavage of the damaged pyrimidine | 29 | 1.11e-02 | 2.77e-02 | 0.3560 | 0.159000 | 0.3190 | 1.38e-01 | 2.99e-03 |
| Depyrimidination | 29 | 1.11e-02 | 2.77e-02 | 0.3560 | 0.159000 | 0.3190 | 1.38e-01 | 2.99e-03 |
| Recognition and association of DNA glycosylase with site containing an affected pyrimidine | 29 | 1.11e-02 | 2.77e-02 | 0.3560 | 0.159000 | 0.3190 | 1.38e-01 | 2.99e-03 |
| Activation of ATR in response to replication stress | 36 | 1.08e-05 | 7.09e-05 | 0.5500 | -0.301000 | -0.4600 | 1.78e-03 | 1.78e-06 |
| Degradation of beta-catenin by the destruction complex | 83 | 4.19e-06 | 3.12e-05 | 0.3480 | 0.153000 | 0.3120 | 1.59e-02 | 8.86e-07 |
| AUF1 (hnRNP D0) binds and destabilizes mRNA | 53 | 2.28e-06 | 1.90e-05 | 0.4730 | 0.246000 | 0.4050 | 1.96e-03 | 3.44e-07 |
| Activation of NF-kappaB in B cells | 65 | 4.60e-06 | 3.36e-05 | 0.4050 | 0.196000 | 0.3540 | 6.28e-03 | 7.73e-07 |
| Response of Mtb to phagocytosis | 22 | 8.56e-04 | 3.26e-03 | 0.5530 | 0.304000 | 0.4620 | 1.36e-02 | 1.75e-04 |
| SCF-beta-TrCP mediated degradation of Emi1 | 53 | 6.63e-05 | 3.37e-04 | 0.3950 | 0.189000 | 0.3470 | 1.76e-02 | 1.25e-05 |
| Circadian Clock | 67 | 3.13e-03 | 9.64e-03 | 0.2300 | 0.062900 | 0.2210 | 3.73e-01 | 1.74e-03 |
| Toll Like Receptor 3 (TLR3) Cascade | 92 | 1.14e-07 | 1.35e-06 | 0.3840 | 0.181000 | 0.3390 | 2.71e-03 | 1.86e-08 |
| Hh mutants abrogate ligand secretion | 54 | 2.00e-06 | 1.73e-05 | 0.4710 | 0.245000 | 0.4030 | 1.86e-03 | 3.01e-07 |
| Vif-mediated degradation of APOBEC3G | 52 | 6.37e-06 | 4.43e-05 | 0.4570 | 0.234000 | 0.3920 | 3.47e-03 | 1.01e-06 |
| TCF dependent signaling in response to WNT | 165 | 1.56e-08 | 2.27e-07 | 0.2800 | 0.103000 | 0.2600 | 2.27e-02 | 7.76e-09 |
| ABC transporter disorders | 69 | 1.04e-06 | 9.65e-06 | 0.4190 | 0.207000 | 0.3650 | 2.93e-03 | 1.61e-07 |
| Anti-inflammatory response favouring Leishmania parasite infection | 167 | 2.96e-04 | 1.28e-03 | 0.1150 | 0.099700 | -0.0575 | 2.62e-02 | 2.00e-01 |
| Leishmania parasite growth and survival | 167 | 2.96e-04 | 1.28e-03 | 0.1150 | 0.099700 | -0.0575 | 2.62e-02 | 2.00e-01 |
| Activation of the pre-replicative complex | 32 | 1.67e-05 | 1.01e-04 | 0.5750 | -0.321000 | -0.4780 | 1.69e-03 | 2.89e-06 |
| Energy dependent regulation of mTOR by LKB1-AMPK | 27 | 6.57e-04 | 2.57e-03 | 0.5030 | 0.269000 | 0.4260 | 1.57e-02 | 1.29e-04 |
| MyD88 cascade initiated on plasma membrane | 82 | 1.85e-10 | 3.89e-09 | 0.5060 | 0.271000 | 0.4270 | 2.15e-05 | 2.19e-11 |
| Toll Like Receptor 10 (TLR10) Cascade | 82 | 1.85e-10 | 3.89e-09 | 0.5060 | 0.271000 | 0.4270 | 2.15e-05 | 2.19e-11 |
| Toll Like Receptor 5 (TLR5) Cascade | 82 | 1.85e-10 | 3.89e-09 | 0.5060 | 0.271000 | 0.4270 | 2.15e-05 | 2.19e-11 |
| Autodegradation of the E3 ubiquitin ligase COP1 | 49 | 9.07e-05 | 4.46e-04 | 0.4080 | 0.200000 | 0.3550 | 1.54e-02 | 1.67e-05 |
| Prolonged ERK activation events | 13 | 6.00e-03 | 1.67e-02 | 0.6210 | 0.354000 | 0.5100 | 2.70e-02 | 1.46e-03 |
| MyD88:MAL(TIRAP) cascade initiated on plasma membrane | 92 | 5.35e-14 | 1.97e-12 | 0.5660 | 0.315000 | 0.4700 | 1.75e-07 | 6.24e-15 |
| Toll Like Receptor 2 (TLR2) Cascade | 92 | 5.35e-14 | 1.97e-12 | 0.5660 | 0.315000 | 0.4700 | 1.75e-07 | 6.24e-15 |
| Toll Like Receptor TLR1:TLR2 Cascade | 92 | 5.35e-14 | 1.97e-12 | 0.5660 | 0.315000 | 0.4700 | 1.75e-07 | 6.24e-15 |
| Toll Like Receptor TLR6:TLR2 Cascade | 92 | 5.35e-14 | 1.97e-12 | 0.5660 | 0.315000 | 0.4700 | 1.75e-07 | 6.24e-15 |
| Fcgamma receptor (FCGR) dependent phagocytosis | 146 | 1.58e-06 | 1.43e-05 | 0.2460 | 0.233000 | 0.0784 | 1.11e-06 | 1.02e-01 |
| Membrane Trafficking | 555 | 5.94e-44 | 2.02e-41 | 0.3990 | 0.194000 | 0.3490 | 5.33e-15 | 5.80e-45 |
| Negative regulation of MET activity | 18 | 4.86e-04 | 1.96e-03 | 0.6470 | 0.374000 | 0.5280 | 6.04e-03 | 1.05e-04 |
| Respiratory electron transport | 101 | 4.86e-07 | 5.06e-06 | 0.3430 | 0.153000 | 0.3070 | 7.94e-03 | 9.65e-08 |
| SARS-CoV Infections | 140 | 4.28e-07 | 4.63e-06 | 0.2750 | 0.102000 | 0.2560 | 3.73e-02 | 1.77e-07 |
| Lysosome Vesicle Biogenesis | 32 | 1.86e-04 | 8.38e-04 | 0.5020 | 0.270000 | 0.4230 | 8.18e-03 | 3.42e-05 |
| MAP2K and MAPK activation | 34 | 5.69e-07 | 5.88e-06 | 0.6470 | 0.374000 | 0.5270 | 1.57e-04 | 1.01e-07 |
| MAPK targets/ Nuclear events mediated by MAP kinases | 31 | 1.89e-03 | 6.36e-03 | 0.4250 | 0.215000 | 0.3670 | 3.85e-02 | 4.02e-04 |
| Degradation of GLI1 by the proteasome | 57 | 3.87e-06 | 2.95e-05 | 0.4460 | 0.230000 | 0.3820 | 2.66e-03 | 5.98e-07 |
| Signaling by VEGF | 97 | 4.56e-06 | 3.34e-05 | 0.3160 | 0.134000 | 0.2860 | 2.21e-02 | 1.08e-06 |
| Interleukin-1 family signaling | 124 | 4.75e-13 | 1.54e-11 | 0.4590 | 0.240000 | 0.3910 | 4.08e-06 | 4.94e-14 |
| Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. | 124 | 2.98e-08 | 4.03e-07 | 0.3390 | 0.152000 | 0.3030 | 3.52e-03 | 5.68e-09 |
| Platelet Aggregation (Plug Formation) | 28 | 7.19e-05 | 3.63e-04 | 0.5750 | 0.325000 | 0.4750 | 2.93e-03 | 1.35e-05 |
| Hedgehog ligand biogenesis | 58 | 1.59e-06 | 1.43e-05 | 0.4610 | 0.242000 | 0.3920 | 1.43e-03 | 2.38e-07 |
| Major pathway of rRNA processing in the nucleolus and cytosol | 179 | 5.49e-11 | 1.31e-09 | 0.3270 | -0.144000 | -0.2940 | 8.97e-04 | 1.14e-11 |
| Negative regulation of FGFR3 signaling | 20 | 2.05e-02 | 4.46e-02 | 0.4170 | 0.210000 | 0.3600 | 1.04e-01 | 5.34e-03 |
| rRNA processing in the nucleus and cytosol | 189 | 1.39e-11 | 3.64e-10 | 0.3280 | -0.145000 | -0.2950 | 5.89e-04 | 2.82e-12 |
| Golgi Cisternae Pericentriolar Stack Reorganization | 14 | 1.58e-03 | 5.41e-03 | 0.6790 | 0.399000 | 0.5490 | 9.69e-03 | 3.77e-04 |
| MyD88-independent TLR4 cascade | 96 | 1.60e-09 | 2.69e-08 | 0.4390 | 0.227000 | 0.3760 | 1.22e-04 | 1.97e-10 |
| TRIF(TICAM1)-mediated TLR4 signaling | 96 | 1.60e-09 | 2.69e-08 | 0.4390 | 0.227000 | 0.3760 | 1.22e-04 | 1.97e-10 |
| APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 | 72 | 2.89e-05 | 1.65e-04 | 0.3490 | 0.161000 | 0.3090 | 1.82e-02 | 5.64e-06 |
| RAB GEFs exchange GTP for GDP on RABs | 87 | 4.32e-08 | 5.66e-07 | 0.4190 | 0.213000 | 0.3610 | 6.05e-04 | 5.86e-09 |
| Dectin-1 mediated noncanonical NF-kB signaling | 58 | 6.49e-06 | 4.49e-05 | 0.4330 | 0.223000 | 0.3710 | 3.31e-03 | 1.02e-06 |
| Infection with Mycobacterium tuberculosis | 26 | 4.34e-04 | 1.78e-03 | 0.5350 | 0.297000 | 0.4450 | 8.74e-03 | 8.63e-05 |
| Vpu mediated degradation of CD4 | 50 | 2.05e-05 | 1.22e-04 | 0.4450 | 0.232000 | 0.3800 | 4.52e-03 | 3.38e-06 |
| Signaling by NTRK1 (TRKA) | 100 | 2.82e-10 | 5.48e-09 | 0.4510 | 0.237000 | 0.3840 | 4.17e-05 | 3.32e-11 |
| Negative regulation of FGFR1 signaling | 24 | 2.05e-02 | 4.46e-02 | 0.3750 | 0.181000 | 0.3280 | 1.24e-01 | 5.43e-03 |
| Homologous DNA Pairing and Strand Exchange | 42 | 2.53e-04 | 1.11e-03 | 0.4230 | -0.217000 | -0.3630 | 1.51e-02 | 4.73e-05 |
| DNA Damage/Telomere Stress Induced Senescence | 44 | 1.50e-02 | 3.50e-02 | 0.2630 | 0.098000 | 0.2440 | 2.61e-01 | 5.16e-03 |
| Protein folding | 90 | 3.93e-05 | 2.09e-04 | 0.2970 | 0.124000 | 0.2690 | 4.19e-02 | 9.89e-06 |
| Hedgehog 'on' state | 74 | 1.26e-05 | 7.92e-05 | 0.3620 | 0.173000 | 0.3180 | 1.02e-02 | 2.24e-06 |
| VEGFA-VEGFR2 Pathway | 90 | 7.70e-07 | 7.39e-06 | 0.3680 | 0.178000 | 0.3220 | 3.61e-03 | 1.24e-07 |
| The role of GTSE1 in G2/M progression after G2 checkpoint | 58 | 1.33e-05 | 8.31e-05 | 0.4190 | 0.215000 | 0.3600 | 4.69e-03 | 2.17e-06 |
| MyD88 dependent cascade initiated on endosome | 88 | 3.62e-11 | 8.80e-10 | 0.5120 | 0.282000 | 0.4270 | 4.63e-06 | 4.44e-12 |
| Intra-Golgi traffic | 43 | 7.74e-03 | 2.06e-02 | 0.2980 | 0.126000 | 0.2700 | 1.54e-01 | 2.19e-03 |
| Downstream signaling events of B Cell Receptor (BCR) | 79 | 3.27e-05 | 1.79e-04 | 0.3290 | 0.149000 | 0.2930 | 2.19e-02 | 6.65e-06 |
| Transcriptional regulation by RUNX2 | 99 | 5.28e-05 | 2.79e-04 | 0.2730 | 0.107000 | 0.2510 | 6.46e-02 | 1.57e-05 |
| DNA methylation | 20 | 1.38e-04 | 6.42e-04 | 0.6680 | 0.395000 | 0.5390 | 2.21e-03 | 3.05e-05 |
| RNA Polymerase I Promoter Opening | 19 | 4.75e-06 | 3.44e-05 | 0.8140 | 0.499000 | 0.6430 | 1.63e-04 | 1.24e-06 |
| Signaling by NOTCH | 182 | 4.60e-15 | 2.51e-13 | 0.4050 | 0.206000 | 0.3490 | 1.67e-06 | 4.60e-16 |
| RHO GTPases Activate WASPs and WAVEs | 35 | 1.35e-10 | 3.02e-09 | 0.8170 | 0.502000 | 0.6450 | 2.79e-07 | 4.06e-11 |
| Semaphorin interactions | 57 | 5.79e-04 | 2.29e-03 | 0.3290 | 0.150000 | 0.2930 | 4.96e-02 | 1.29e-04 |
| RHO GTPases Activate NADPH Oxidases | 21 | 1.52e-05 | 9.29e-05 | 0.7330 | 0.442000 | 0.5840 | 4.58e-04 | 3.52e-06 |
| HuR (ELAVL1) binds and stabilizes mRNA | 10 | 2.24e-02 | 4.83e-02 | 0.6140 | 0.499000 | 0.3570 | 6.26e-03 | 5.08e-02 |
| Toll Like Receptor 7/8 (TLR7/8) Cascade | 89 | 1.30e-11 | 3.47e-10 | 0.5210 | 0.290000 | 0.4330 | 2.18e-06 | 1.63e-12 |
| Toll Like Receptor 4 (TLR4) Cascade | 121 | 5.54e-15 | 2.90e-13 | 0.5110 | 0.283000 | 0.4250 | 7.62e-08 | 6.13e-16 |
| Degradation of GLI2 by the proteasome | 56 | 3.79e-06 | 2.92e-05 | 0.4560 | 0.243000 | 0.3860 | 1.62e-03 | 5.86e-07 |
| GLI3 is processed to GLI3R by the proteasome | 56 | 3.79e-06 | 2.92e-05 | 0.4560 | 0.243000 | 0.3860 | 1.62e-03 | 5.86e-07 |
| TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation | 87 | 1.44e-11 | 3.71e-10 | 0.5270 | 0.295000 | 0.4370 | 2.02e-06 | 1.85e-12 |
| Signaling by TGF-beta Receptor Complex | 72 | 1.39e-03 | 4.85e-03 | 0.2580 | 0.096800 | 0.2390 | 1.56e-01 | 4.56e-04 |
| Intra-Golgi and retrograde Golgi-to-ER traffic | 179 | 7.30e-12 | 2.07e-10 | 0.3510 | 0.167000 | 0.3090 | 1.16e-04 | 1.00e-12 |
| Ubiquitin Mediated Degradation of Phosphorylated Cdc25A | 50 | 2.44e-05 | 1.42e-04 | 0.4440 | 0.235000 | 0.3770 | 4.00e-03 | 4.05e-06 |
| p53-Independent DNA Damage Response | 50 | 2.44e-05 | 1.42e-04 | 0.4440 | 0.235000 | 0.3770 | 4.00e-03 | 4.05e-06 |
| p53-Independent G1/S DNA damage checkpoint | 50 | 2.44e-05 | 1.42e-04 | 0.4440 | 0.235000 | 0.3770 | 4.00e-03 | 4.05e-06 |
| Hyaluronan uptake and degradation | 12 | 3.64e-05 | 1.95e-04 | 0.9410 | 0.591000 | 0.7320 | 3.93e-04 | 1.12e-05 |
| InlB-mediated entry of Listeria monocytogenes into host cell | 12 | 5.70e-03 | 1.60e-02 | 0.6580 | 0.390000 | 0.5300 | 1.94e-02 | 1.48e-03 |
| Cell recruitment (pro-inflammatory response) | 22 | 1.08e-03 | 3.92e-03 | 0.5510 | 0.453000 | 0.3130 | 2.35e-04 | 1.10e-02 |
| Purinergic signaling in leishmaniasis infection | 22 | 1.08e-03 | 3.92e-03 | 0.5510 | 0.453000 | 0.3130 | 2.35e-04 | 1.10e-02 |
| Regulation of Apoptosis | 51 | 9.67e-06 | 6.43e-05 | 0.4620 | 0.249000 | 0.3890 | 2.09e-03 | 1.56e-06 |
| Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models | 20 | 1.74e-04 | 7.90e-04 | 0.6600 | 0.392000 | 0.5310 | 2.42e-03 | 3.94e-05 |
| Neurodegenerative Diseases | 20 | 1.74e-04 | 7.90e-04 | 0.6600 | 0.392000 | 0.5310 | 2.42e-03 | 3.94e-05 |
| Platelet activation, signaling and aggregation | 219 | 2.66e-22 | 3.30e-20 | 0.4650 | 0.252000 | 0.3900 | 1.25e-10 | 2.28e-23 |
| EPH-ephrin mediated repulsion of cells | 39 | 5.57e-03 | 1.57e-02 | 0.3370 | 0.159000 | 0.2970 | 8.56e-02 | 1.35e-03 |
| RUNX1 regulates transcription of genes involved in differentiation of HSCs | 82 | 6.85e-09 | 1.06e-07 | 0.4670 | 0.254000 | 0.3910 | 6.84e-05 | 9.03e-10 |
| Peptide hormone metabolism | 49 | 9.38e-03 | 2.41e-02 | 0.2700 | 0.247000 | 0.1100 | 2.81e-03 | 1.83e-01 |
| Golgi-to-ER retrograde transport | 111 | 5.73e-10 | 1.03e-08 | 0.4220 | 0.222000 | 0.3580 | 5.20e-05 | 6.86e-11 |
| Plasma lipoprotein clearance | 28 | 1.36e-02 | 3.27e-02 | 0.3690 | 0.184000 | 0.3200 | 9.23e-02 | 3.42e-03 |
| E3 ubiquitin ligases ubiquitinate target proteins | 52 | 9.22e-05 | 4.52e-04 | 0.4040 | 0.210000 | 0.3450 | 8.87e-03 | 1.63e-05 |
| Activation of G protein gated Potassium channels | 20 | 1.03e-02 | 2.61e-02 | 0.4670 | 0.390000 | 0.2560 | 2.51e-03 | 4.79e-02 |
| G protein gated Potassium channels | 20 | 1.03e-02 | 2.61e-02 | 0.4670 | 0.390000 | 0.2560 | 2.51e-03 | 4.79e-02 |
| Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits | 20 | 1.03e-02 | 2.61e-02 | 0.4670 | 0.390000 | 0.2560 | 2.51e-03 | 4.79e-02 |
| Signaling by WNT | 253 | 9.98e-12 | 2.74e-10 | 0.2830 | 0.121000 | 0.2560 | 9.01e-04 | 2.45e-12 |
| RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function | 53 | 4.94e-04 | 1.98e-03 | 0.3550 | 0.175000 | 0.3090 | 2.75e-02 | 9.83e-05 |
| NIK-->noncanonical NF-kB signaling | 57 | 7.40e-06 | 5.01e-05 | 0.4420 | 0.238000 | 0.3720 | 1.89e-03 | 1.18e-06 |
| Intracellular signaling by second messengers | 271 | 5.16e-10 | 9.38e-09 | 0.2390 | 0.088400 | 0.2220 | 1.23e-02 | 2.91e-10 |
| Regulation of ornithine decarboxylase (ODC) | 49 | 2.32e-06 | 1.93e-05 | 0.5070 | 0.285000 | 0.4190 | 5.52e-04 | 3.84e-07 |
| ER Quality Control Compartment (ERQC) | 21 | 1.14e-02 | 2.82e-02 | 0.4490 | 0.243000 | 0.3770 | 5.37e-02 | 2.79e-03 |
| Toll Like Receptor 9 (TLR9) Cascade | 92 | 5.72e-11 | 1.34e-09 | 0.4990 | 0.280000 | 0.4130 | 3.48e-06 | 7.57e-12 |
| Metabolism of carbohydrates | 241 | 1.94e-08 | 2.79e-07 | 0.2280 | 0.081000 | 0.2130 | 3.03e-02 | 1.14e-08 |
| PIP3 activates AKT signaling | 239 | 3.36e-09 | 5.51e-08 | 0.2470 | 0.095800 | 0.2280 | 1.08e-02 | 1.32e-09 |
| Signaling by RAF1 mutants | 34 | 7.43e-06 | 5.01e-05 | 0.5890 | 0.345000 | 0.4770 | 4.96e-04 | 1.47e-06 |
| RNA Polymerase II Pre-transcription Events | 78 | 7.73e-03 | 2.06e-02 | 0.1990 | 0.059100 | 0.1900 | 3.67e-01 | 3.63e-03 |
| Metabolism of nucleotides | 86 | 1.35e-03 | 4.75e-03 | 0.2360 | 0.219000 | 0.0876 | 4.53e-04 | 1.60e-01 |
| Transcriptional regulation by RUNX1 | 184 | 3.25e-06 | 2.56e-05 | 0.2180 | 0.074200 | 0.2050 | 8.24e-02 | 1.69e-06 |
| APC/C:Cdc20 mediated degradation of Securin | 66 | 7.95e-05 | 3.97e-04 | 0.3570 | 0.179000 | 0.3090 | 1.20e-02 | 1.42e-05 |
| G-protein beta:gamma signalling | 29 | 7.26e-04 | 2.83e-03 | 0.4920 | 0.277000 | 0.4060 | 9.91e-03 | 1.51e-04 |
| Antimicrobial peptides | 33 | 2.72e-06 | 2.18e-05 | 0.6260 | 0.503000 | 0.3730 | 5.78e-07 | 2.08e-04 |
| Diseases of programmed cell death | 27 | 1.29e-02 | 3.12e-02 | 0.3840 | 0.199000 | 0.3280 | 7.39e-02 | 3.17e-03 |
| The citric acid (TCA) cycle and respiratory electron transport | 172 | 2.28e-09 | 3.79e-08 | 0.3140 | 0.148000 | 0.2770 | 8.13e-04 | 3.49e-10 |
| Hedgehog 'off' state | 91 | 9.82e-04 | 3.63e-03 | 0.2360 | 0.089200 | 0.2180 | 1.41e-01 | 3.18e-04 |
| Asparagine N-linked glycosylation | 269 | 4.80e-18 | 4.09e-16 | 0.3670 | 0.187000 | 0.3160 | 1.32e-07 | 4.39e-19 |
| Signaling by NTRKs | 114 | 2.13e-11 | 5.28e-10 | 0.4540 | 0.250000 | 0.3790 | 3.88e-06 | 2.57e-12 |
| Interleukin-3, Interleukin-5 and GM-CSF signaling | 40 | 4.40e-03 | 1.28e-02 | 0.3460 | 0.172000 | 0.3010 | 6.04e-02 | 1.00e-03 |
| Signaling by high-kinase activity BRAF mutants | 31 | 5.20e-06 | 3.65e-05 | 0.6300 | 0.376000 | 0.5050 | 2.88e-04 | 1.13e-06 |
| DNA strand elongation | 32 | 3.38e-06 | 2.65e-05 | 0.6310 | -0.377000 | -0.5060 | 2.23e-04 | 7.32e-07 |
| Platelet Adhesion to exposed collagen | 13 | 1.31e-03 | 4.62e-03 | 0.7240 | 0.572000 | 0.4430 | 3.56e-04 | 5.66e-03 |
| G-protein mediated events | 44 | 3.59e-03 | 1.09e-02 | 0.3340 | 0.163000 | 0.2920 | 6.07e-02 | 8.17e-04 |
| Golgi Associated Vesicle Biogenesis | 55 | 4.03e-06 | 3.04e-05 | 0.4660 | 0.260000 | 0.3870 | 8.66e-04 | 6.62e-07 |
| Resolution of AP sites via the multiple-nucleotide patch replacement pathway | 24 | 2.09e-03 | 6.90e-03 | 0.5010 | -0.285000 | -0.4120 | 1.58e-02 | 4.70e-04 |
| Paradoxical activation of RAF signaling by kinase inactive BRAF | 38 | 1.15e-05 | 7.30e-05 | 0.5450 | 0.316000 | 0.4440 | 7.37e-04 | 2.20e-06 |
| Signaling by RAS mutants | 38 | 1.15e-05 | 7.30e-05 | 0.5450 | 0.316000 | 0.4440 | 7.37e-04 | 2.20e-06 |
| Signaling by moderate kinase activity BRAF mutants | 38 | 1.15e-05 | 7.30e-05 | 0.5450 | 0.316000 | 0.4440 | 7.37e-04 | 2.20e-06 |
| Signaling downstream of RAS mutants | 38 | 1.15e-05 | 7.30e-05 | 0.5450 | 0.316000 | 0.4440 | 7.37e-04 | 2.20e-06 |
| HSP90 chaperone cycle for steroid hormone receptors (SHR) | 36 | 3.45e-05 | 1.86e-04 | 0.5310 | 0.308000 | 0.4330 | 1.41e-03 | 6.76e-06 |
| MHC class II antigen presentation | 101 | 3.43e-04 | 1.45e-03 | 0.2450 | 0.098700 | 0.2240 | 8.66e-02 | 9.66e-05 |
| Autodegradation of Cdh1 by Cdh1:APC/C | 64 | 7.19e-05 | 3.63e-04 | 0.3680 | 0.190000 | 0.3160 | 8.57e-03 | 1.26e-05 |
| alpha-linolenic (omega3) and linoleic (omega6) acid metabolism | 12 | 7.06e-06 | 4.81e-05 | 1.0200 | 0.656000 | 0.7810 | 8.39e-05 | 2.80e-06 |
| alpha-linolenic acid (ALA) metabolism | 12 | 7.06e-06 | 4.81e-05 | 1.0200 | 0.656000 | 0.7810 | 8.39e-05 | 2.80e-06 |
| Plasma lipoprotein assembly, remodeling, and clearance | 52 | 2.27e-03 | 7.20e-03 | 0.3180 | 0.154000 | 0.2790 | 5.50e-02 | 5.04e-04 |
| Response of EIF2AK1 (HRI) to heme deficiency | 14 | 1.62e-02 | 3.72e-02 | 0.5410 | 0.439000 | 0.3150 | 4.41e-03 | 4.15e-02 |
| COPI-dependent Golgi-to-ER retrograde traffic | 78 | 3.77e-04 | 1.56e-03 | 0.2920 | 0.135000 | 0.2580 | 3.89e-02 | 8.01e-05 |
| Class I MHC mediated antigen processing & presentation | 347 | 1.00e-11 | 2.74e-10 | 0.2360 | 0.093700 | 0.2170 | 2.72e-03 | 4.12e-12 |
| Signaling by Receptor Tyrosine Kinases | 408 | 7.11e-22 | 8.08e-20 | 0.3270 | 0.161000 | 0.2840 | 2.19e-08 | 6.76e-23 |
| Neddylation | 217 | 6.19e-07 | 6.12e-06 | 0.2180 | 0.080500 | 0.2030 | 4.10e-02 | 2.57e-07 |
| Beta-catenin independent WNT signaling | 136 | 4.08e-07 | 4.53e-06 | 0.3060 | 0.147000 | 0.2680 | 3.15e-03 | 6.53e-08 |
| Metabolism of steroids | 116 | 5.72e-05 | 2.99e-04 | 0.2600 | 0.113000 | 0.2340 | 3.49e-02 | 1.30e-05 |
| EPH-Ephrin signaling | 78 | 1.61e-10 | 3.53e-09 | 0.5370 | 0.315000 | 0.4360 | 1.52e-06 | 2.84e-11 |
| G beta:gamma signalling through CDC42 | 17 | 5.40e-03 | 1.53e-02 | 0.5550 | 0.448000 | 0.3280 | 1.39e-03 | 1.90e-02 |
| CLEC7A (Dectin-1) signaling | 96 | 5.48e-08 | 6.92e-07 | 0.4070 | 0.222000 | 0.3410 | 1.66e-04 | 7.64e-09 |
| Toll-like Receptor Cascades | 143 | 4.51e-16 | 3.11e-14 | 0.4950 | 0.286000 | 0.4040 | 3.68e-09 | 6.79e-17 |
| Cellular Senescence | 144 | 6.90e-06 | 4.75e-05 | 0.2590 | 0.114000 | 0.2320 | 1.85e-02 | 1.48e-06 |
| Diseases of signal transduction by growth factor receptors and second messengers | 339 | 7.52e-16 | 4.88e-14 | 0.3000 | 0.145000 | 0.2630 | 4.51e-06 | 8.91e-17 |
| Stabilization of p53 | 54 | 3.09e-04 | 1.33e-03 | 0.3730 | 0.199000 | 0.3160 | 1.16e-02 | 5.82e-05 |
| Sphingolipid metabolism | 78 | 1.41e-04 | 6.55e-04 | 0.3180 | 0.158000 | 0.2750 | 1.56e-02 | 2.61e-05 |
| Rho GTPase cycle | 125 | 9.48e-04 | 3.54e-03 | 0.1970 | 0.068000 | 0.1840 | 1.89e-01 | 3.69e-04 |
| p75 NTR receptor-mediated signalling | 88 | 1.50e-03 | 5.15e-03 | 0.2410 | 0.102000 | 0.2190 | 9.72e-02 | 3.92e-04 |
| Regulation of RUNX2 expression and activity | 66 | 8.78e-04 | 3.33e-03 | 0.3060 | 0.150000 | 0.2660 | 3.49e-02 | 1.81e-04 |
| Transcriptional regulation by RUNX3 | 90 | 5.23e-04 | 2.08e-03 | 0.2630 | 0.119000 | 0.2350 | 5.11e-02 | 1.18e-04 |
| Platelet homeostasis | 67 | 1.03e-04 | 4.98e-04 | 0.3560 | 0.187000 | 0.3030 | 8.06e-03 | 1.83e-05 |
| CDT1 association with the CDC6:ORC:origin complex | 57 | 8.03e-04 | 3.09e-03 | 0.3370 | 0.174000 | 0.2890 | 2.33e-02 | 1.60e-04 |
| Signaling by Non-Receptor Tyrosine Kinases | 47 | 2.59e-03 | 8.05e-03 | 0.3400 | 0.176000 | 0.2910 | 3.72e-02 | 5.59e-04 |
| Signaling by PTK6 | 47 | 2.59e-03 | 8.05e-03 | 0.3400 | 0.176000 | 0.2910 | 3.72e-02 | 5.59e-04 |
| HDR through Single Strand Annealing (SSA) | 37 | 1.27e-02 | 3.11e-02 | 0.3260 | -0.165000 | -0.2800 | 8.17e-02 | 3.15e-03 |
| Chaperonin-mediated protein folding | 84 | 6.02e-05 | 3.11e-04 | 0.3220 | 0.163000 | 0.2780 | 9.84e-03 | 1.06e-05 |
| Pre-NOTCH Transcription and Translation | 49 | 3.64e-05 | 1.95e-04 | 0.4520 | 0.257000 | 0.3720 | 1.85e-03 | 6.78e-06 |
| Translocation of SLC2A4 (GLUT4) to the plasma membrane | 48 | 5.29e-05 | 2.79e-04 | 0.4480 | 0.254000 | 0.3690 | 2.32e-03 | 9.94e-06 |
| Amyloid fiber formation | 51 | 1.27e-08 | 1.90e-07 | 0.6030 | 0.365000 | 0.4800 | 6.35e-06 | 3.05e-09 |
| Antigen processing: Ubiquitination & Proteasome degradation | 286 | 3.40e-06 | 2.65e-05 | 0.1660 | 0.045900 | 0.1590 | 1.82e-01 | 3.58e-06 |
| RAB geranylgeranylation | 61 | 1.95e-06 | 1.70e-05 | 0.4610 | 0.264000 | 0.3770 | 3.62e-04 | 3.41e-07 |
| Post-translational protein phosphorylation | 68 | 4.25e-07 | 4.63e-06 | 0.4610 | 0.264000 | 0.3780 | 1.62e-04 | 7.22e-08 |
| Signaling by Hedgehog | 119 | 1.17e-04 | 5.58e-04 | 0.2490 | 0.110000 | 0.2230 | 3.80e-02 | 2.61e-05 |
| PLC beta mediated events | 43 | 2.98e-03 | 9.20e-03 | 0.3540 | 0.188000 | 0.3010 | 3.33e-02 | 6.50e-04 |
| SCF(Skp2)-mediated degradation of p27/p21 | 60 | 9.28e-04 | 3.49e-03 | 0.3250 | 0.167000 | 0.2790 | 2.56e-02 | 1.87e-04 |
| Fc epsilon receptor (FCERI) signaling | 189 | 1.33e-05 | 8.31e-05 | 0.2110 | 0.194000 | 0.0832 | 4.04e-06 | 4.86e-02 |
| NS1 Mediated Effects on Host Pathways | 40 | 1.52e-02 | 3.54e-02 | 0.3050 | -0.153000 | -0.2640 | 9.38e-02 | 3.85e-03 |
| Cargo concentration in the ER | 30 | 1.44e-06 | 1.32e-05 | 0.6810 | 0.423000 | 0.5340 | 6.09e-05 | 4.19e-07 |
| Cyclin A:Cdk2-associated events at S phase entry | 85 | 5.90e-03 | 1.65e-02 | 0.2140 | 0.085400 | 0.1960 | 1.73e-01 | 1.78e-03 |
| Signaling by NOTCH1 | 66 | 8.99e-05 | 4.44e-04 | 0.3650 | 0.197000 | 0.3070 | 5.71e-03 | 1.60e-05 |
| Assembly of the pre-replicative complex | 66 | 6.21e-03 | 1.71e-02 | 0.2530 | 0.115000 | 0.2250 | 1.07e-01 | 1.58e-03 |
| L1CAM interactions | 83 | 5.12e-06 | 3.62e-05 | 0.3730 | 0.203000 | 0.3130 | 1.35e-03 | 8.17e-07 |
| CDK-mediated phosphorylation and removal of Cdc6 | 71 | 2.40e-04 | 1.05e-03 | 0.3280 | 0.171000 | 0.2800 | 1.29e-02 | 4.45e-05 |
| Potential therapeutics for SARS | 78 | 4.28e-03 | 1.26e-02 | 0.2380 | 0.104000 | 0.2130 | 1.12e-01 | 1.11e-03 |
| Metabolism of lipids | 619 | 2.02e-20 | 1.97e-18 | 0.2490 | 0.113000 | 0.2220 | 1.62e-06 | 3.83e-21 |
| FLT3 Signaling | 242 | 4.37e-07 | 4.68e-06 | 0.2170 | 0.089500 | 0.1980 | 1.65e-02 | 1.16e-07 |
| mRNA Splicing - Major Pathway | 179 | 1.41e-02 | 3.35e-02 | 0.0844 | -0.028900 | 0.0793 | 5.05e-01 | 6.71e-02 |
| RHO GTPase Effectors | 248 | 1.12e-12 | 3.47e-11 | 0.3190 | 0.165000 | 0.2730 | 7.43e-06 | 1.19e-13 |
| Amino acids regulate mTORC1 | 50 | 1.38e-04 | 6.44e-04 | 0.4160 | 0.235000 | 0.3430 | 3.99e-03 | 2.68e-05 |
| Formation of the beta-catenin:TCF transactivating complex | 46 | 1.99e-02 | 4.36e-02 | 0.2710 | 0.130000 | 0.2380 | 1.27e-01 | 5.30e-03 |
| Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell | 181 | 2.01e-04 | 8.97e-04 | 0.1810 | -0.062100 | -0.1700 | 1.50e-01 | 8.33e-05 |
| p53-Dependent G1 DNA Damage Response | 63 | 1.15e-03 | 4.11e-03 | 0.3130 | 0.161000 | 0.2680 | 2.74e-02 | 2.34e-04 |
| p53-Dependent G1/S DNA damage checkpoint | 63 | 1.15e-03 | 4.11e-03 | 0.3130 | 0.161000 | 0.2680 | 2.74e-02 | 2.34e-04 |
| Signaling by Rho GTPases | 364 | 9.12e-14 | 3.11e-12 | 0.2690 | 0.129000 | 0.2360 | 2.29e-05 | 1.15e-14 |
| Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants | 53 | 2.23e-03 | 7.10e-03 | 0.3260 | 0.171000 | 0.2770 | 3.08e-02 | 4.75e-04 |
| Constitutive Signaling by NOTCH1 PEST Domain Mutants | 53 | 2.23e-03 | 7.10e-03 | 0.3260 | 0.171000 | 0.2770 | 3.08e-02 | 4.75e-04 |
| Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer | 53 | 2.23e-03 | 7.10e-03 | 0.3260 | 0.171000 | 0.2770 | 3.08e-02 | 4.75e-04 |
| Signaling by NOTCH1 PEST Domain Mutants in Cancer | 53 | 2.23e-03 | 7.10e-03 | 0.3260 | 0.171000 | 0.2770 | 3.08e-02 | 4.75e-04 |
| Signaling by NOTCH1 in Cancer | 53 | 2.23e-03 | 7.10e-03 | 0.3260 | 0.171000 | 0.2770 | 3.08e-02 | 4.75e-04 |
| ADP signalling through P2Y purinoceptor 12 | 18 | 3.60e-03 | 1.09e-02 | 0.5650 | 0.449000 | 0.3430 | 9.80e-04 | 1.18e-02 |
| MTOR signalling | 39 | 1.11e-04 | 5.35e-04 | 0.4840 | 0.285000 | 0.3910 | 2.05e-03 | 2.41e-05 |
| Opioid Signalling | 75 | 1.44e-05 | 8.82e-05 | 0.3780 | 0.209000 | 0.3150 | 1.71e-03 | 2.44e-06 |
| RAF/MAP kinase cascade | 228 | 2.10e-06 | 1.78e-05 | 0.2110 | 0.087300 | 0.1920 | 2.32e-02 | 5.48e-07 |
| Signaling by the B Cell Receptor (BCR) | 161 | 2.47e-03 | 7.72e-03 | 0.1520 | 0.146000 | 0.0421 | 1.38e-03 | 3.57e-01 |
| G beta:gamma signalling through BTK | 15 | 2.31e-02 | 4.93e-02 | 0.5040 | 0.404000 | 0.3010 | 6.74e-03 | 4.38e-02 |
| Deubiquitination | 240 | 3.64e-08 | 4.86e-07 | 0.2460 | 0.115000 | 0.2180 | 2.16e-03 | 5.99e-09 |
| Cyclin E associated events during G1/S transition | 83 | 4.07e-03 | 1.21e-02 | 0.2340 | 0.106000 | 0.2090 | 9.41e-02 | 1.01e-03 |
| ABC-family proteins mediated transport | 92 | 5.43e-05 | 2.86e-04 | 0.3140 | 0.165000 | 0.2670 | 6.13e-03 | 9.34e-06 |
| Macroautophagy | 109 | 2.06e-07 | 2.37e-06 | 0.3690 | 0.205000 | 0.3070 | 2.14e-04 | 3.09e-08 |
| Neutrophil degranulation | 456 | 1.26e-111 | 1.72e-108 | 0.7700 | 0.491000 | 0.5930 | 9.83e-73 | 2.07e-105 |
| Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins | 75 | 3.48e-04 | 1.47e-03 | 0.3140 | 0.165000 | 0.2660 | 1.34e-02 | 6.59e-05 |
| Pentose phosphate pathway | 13 | 3.27e-03 | 1.00e-02 | 0.6770 | 0.425000 | 0.5260 | 7.94e-03 | 1.01e-03 |
| Regulation of TP53 Activity | 152 | 7.37e-03 | 1.97e-02 | 0.1370 | -0.133000 | -0.0317 | 4.70e-03 | 5.00e-01 |
| Cristae formation | 31 | 1.27e-02 | 3.11e-02 | 0.3680 | 0.205000 | 0.3060 | 4.85e-02 | 3.21e-03 |
| Retrograde transport at the Trans-Golgi-Network | 49 | 1.99e-02 | 4.36e-02 | 0.2650 | 0.130000 | 0.2310 | 1.16e-01 | 5.24e-03 |
| MAPK1/MAPK3 signaling | 233 | 7.58e-07 | 7.33e-06 | 0.2230 | 0.099300 | 0.2000 | 9.02e-03 | 1.52e-07 |
| mRNA Splicing | 187 | 2.22e-02 | 4.79e-02 | 0.0805 | -0.021200 | 0.0777 | 6.18e-01 | 6.69e-02 |
| MET activates RAP1 and RAC1 | 10 | 4.02e-03 | 1.20e-02 | 0.7610 | 0.487000 | 0.5850 | 7.65e-03 | 1.37e-03 |
| Autophagy | 123 | 3.51e-10 | 6.74e-09 | 0.4200 | 0.244000 | 0.3420 | 2.86e-06 | 5.90e-11 |
| APC/C:Cdc20 mediated degradation of mitotic proteins | 74 | 4.48e-04 | 1.82e-03 | 0.3120 | 0.167000 | 0.2640 | 1.30e-02 | 8.63e-05 |
| Hyaluronan metabolism | 15 | 8.47e-04 | 3.24e-03 | 0.7020 | 0.446000 | 0.5430 | 2.80e-03 | 2.74e-04 |
| Nucleobase catabolism | 28 | 1.07e-02 | 2.71e-02 | 0.4000 | 0.327000 | 0.2310 | 2.77e-03 | 3.47e-02 |
| Collagen degradation | 28 | 3.55e-04 | 1.49e-03 | 0.5400 | 0.331000 | 0.4260 | 2.45e-03 | 9.41e-05 |
| Post-translational protein modification | 1183 | 2.92e-28 | 4.42e-26 | 0.2150 | 0.097100 | 0.1920 | 1.84e-08 | 7.00e-29 |
| SIRT1 negatively regulates rRNA expression | 24 | 9.93e-03 | 2.54e-02 | 0.4390 | 0.354000 | 0.2600 | 2.67e-03 | 2.73e-02 |
| GRB2:SOS provides linkage to MAPK signaling for Integrins | 12 | 4.56e-04 | 1.84e-03 | 0.8230 | 0.627000 | 0.5330 | 1.71e-04 | 1.39e-03 |
| Estrogen-dependent gene expression | 98 | 8.66e-05 | 4.31e-04 | 0.2990 | 0.159000 | 0.2530 | 6.47e-03 | 1.53e-05 |
| Signaling by Nuclear Receptors | 214 | 5.26e-09 | 8.24e-08 | 0.2890 | 0.153000 | 0.2450 | 1.17e-04 | 6.64e-10 |
| Activation of Matrix Metalloproteinases | 23 | 8.98e-03 | 2.31e-02 | 0.4550 | 0.365000 | 0.2730 | 2.47e-03 | 2.36e-02 |
| Erythropoietin activates RAS | 13 | 1.50e-02 | 3.50e-02 | 0.5780 | 0.360000 | 0.4520 | 2.45e-02 | 4.74e-03 |
| Developmental Biology | 726 | 1.61e-13 | 5.35e-12 | 0.1790 | 0.072300 | 0.1630 | 9.06e-04 | 6.48e-14 |
| Unfolded Protein Response (UPR) | 87 | 5.71e-03 | 1.60e-02 | 0.2260 | 0.108000 | 0.1990 | 8.15e-02 | 1.37e-03 |
| Protein ubiquitination | 72 | 4.98e-06 | 3.55e-05 | 0.4130 | 0.243000 | 0.3330 | 3.59e-04 | 1.01e-06 |
| IKK complex recruitment mediated by RIP1 | 23 | 6.89e-03 | 1.88e-02 | 0.4690 | 0.284000 | 0.3740 | 1.84e-02 | 1.91e-03 |
| GTP hydrolysis and joining of the 60S ribosomal subunit | 110 | 1.76e-02 | 3.94e-02 | 0.1640 | -0.061900 | -0.1520 | 2.62e-01 | 5.96e-03 |
| B-WICH complex positively regulates rRNA expression | 44 | 1.80e-02 | 4.01e-02 | 0.2930 | 0.247000 | 0.1570 | 4.61e-03 | 7.15e-02 |
| G1/S DNA Damage Checkpoints | 65 | 1.49e-03 | 5.13e-03 | 0.3090 | 0.169000 | 0.2580 | 1.85e-02 | 3.13e-04 |
| C-type lectin receptors (CLRs) | 128 | 9.15e-08 | 1.10e-06 | 0.3530 | 0.201000 | 0.2900 | 8.79e-05 | 1.46e-08 |
| Interleukin-4 and Interleukin-13 signaling | 92 | 1.59e-07 | 1.87e-06 | 0.4140 | 0.334000 | 0.2450 | 3.19e-08 | 4.71e-05 |
| APC/C-mediated degradation of cell cycle proteins | 86 | 2.32e-03 | 7.29e-03 | 0.2530 | 0.130000 | 0.2170 | 3.77e-02 | 4.98e-04 |
| Regulation of mitotic cell cycle | 86 | 2.32e-03 | 7.29e-03 | 0.2530 | 0.130000 | 0.2170 | 3.77e-02 | 4.98e-04 |
| Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) | 78 | 2.39e-06 | 1.95e-05 | 0.4090 | 0.242000 | 0.3290 | 2.22e-04 | 4.88e-07 |
| L13a-mediated translational silencing of Ceruloplasmin expression | 109 | 2.28e-02 | 4.89e-02 | 0.1600 | -0.060700 | -0.1480 | 2.74e-01 | 7.77e-03 |
| Programmed Cell Death | 179 | 2.12e-11 | 5.28e-10 | 0.3700 | 0.215000 | 0.3010 | 7.04e-07 | 3.45e-12 |
| HIV Infection | 224 | 3.25e-05 | 1.79e-04 | 0.1960 | 0.088300 | 0.1750 | 2.28e-02 | 6.70e-06 |
| rRNA processing | 218 | 4.60e-10 | 8.59e-09 | 0.3090 | -0.171000 | -0.2570 | 1.37e-05 | 5.96e-11 |
| APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 72 | 4.50e-04 | 1.83e-03 | 0.3220 | 0.181000 | 0.2670 | 7.87e-03 | 9.12e-05 |
| Signal Transduction | 1869 | 1.00e-35 | 2.74e-33 | 0.1980 | 0.090300 | 0.1760 | 1.01e-10 | 2.34e-36 |
| Oncogenic MAPK signaling | 73 | 1.58e-06 | 1.43e-05 | 0.4310 | 0.259000 | 0.3450 | 1.27e-04 | 3.54e-07 |
| Phospholipid metabolism | 184 | 1.17e-06 | 1.08e-05 | 0.2630 | 0.138000 | 0.2230 | 1.20e-03 | 1.73e-07 |
| Apoptosis | 167 | 4.84e-10 | 8.92e-09 | 0.3570 | 0.207000 | 0.2920 | 4.01e-06 | 7.84e-11 |
| HDR through Homologous Recombination (HRR) | 66 | 5.92e-03 | 1.65e-02 | 0.2690 | -0.143000 | -0.2280 | 4.42e-02 | 1.36e-03 |
| Cdc20:Phospho-APC/C mediated degradation of Cyclin A | 71 | 4.48e-04 | 1.82e-03 | 0.3250 | 0.184000 | 0.2680 | 7.38e-03 | 9.15e-05 |
| Regulation of APC/C activators between G1/S and early anaphase | 79 | 1.92e-03 | 6.42e-03 | 0.2720 | 0.146000 | 0.2300 | 2.51e-02 | 4.06e-04 |
| Response to elevated platelet cytosolic Ca2+ | 108 | 8.50e-17 | 6.44e-15 | 0.5990 | 0.380000 | 0.4630 | 9.02e-12 | 8.21e-17 |
| Uptake and actions of bacterial toxins | 27 | 1.61e-02 | 3.70e-02 | 0.3920 | 0.232000 | 0.3160 | 3.68e-02 | 4.49e-03 |
| TP53 Regulates Metabolic Genes | 85 | 3.16e-04 | 1.35e-03 | 0.3020 | 0.168000 | 0.2510 | 7.32e-03 | 6.18e-05 |
| Generation of second messenger molecules | 38 | 4.43e-07 | 4.68e-06 | 0.6360 | -0.406000 | -0.4890 | 1.45e-05 | 1.82e-07 |
| Mitotic G2-G2/M phases | 180 | 1.19e-02 | 2.92e-02 | 0.1270 | 0.039000 | 0.1210 | 3.67e-01 | 5.23e-03 |
| G2/M Transition | 178 | 1.77e-02 | 3.95e-02 | 0.1180 | 0.032600 | 0.1140 | 4.54e-01 | 8.75e-03 |
| Pyruvate metabolism and Citric Acid (TCA) cycle | 52 | 1.21e-02 | 2.96e-02 | 0.2850 | 0.157000 | 0.2380 | 5.05e-02 | 3.00e-03 |
| Thromboxane signalling through TP receptor | 20 | 2.32e-03 | 7.29e-03 | 0.5630 | 0.436000 | 0.3560 | 7.37e-04 | 5.86e-03 |
| Condensation of Prophase Chromosomes | 29 | 1.33e-02 | 3.22e-02 | 0.3880 | 0.231000 | 0.3110 | 3.12e-02 | 3.72e-03 |
| Mitotic Anaphase | 223 | 5.90e-04 | 2.32e-03 | 0.1620 | 0.067200 | 0.1470 | 8.36e-02 | 1.56e-04 |
| Nervous system development | 470 | 4.39e-07 | 4.68e-06 | 0.1550 | 0.062500 | 0.1420 | 2.02e-02 | 1.28e-07 |
| Protein localization | 157 | 2.13e-03 | 6.95e-03 | 0.1800 | 0.081100 | 0.1610 | 7.96e-02 | 5.13e-04 |
| Translocation of ZAP-70 to Immunological synapse | 24 | 7.25e-11 | 1.67e-09 | 1.0200 | -0.679000 | -0.7590 | 8.22e-09 | 1.20e-10 |
| Signalling to ERKs | 31 | 5.93e-04 | 2.33e-03 | 0.4990 | 0.311000 | 0.3900 | 2.72e-03 | 1.73e-04 |
| Muscle contraction | 135 | 7.75e-03 | 2.06e-02 | 0.1710 | 0.075400 | 0.1540 | 1.30e-01 | 2.07e-03 |
| IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation | 15 | 5.03e-03 | 1.44e-02 | 0.6090 | 0.390000 | 0.4680 | 8.96e-03 | 1.72e-03 |
| Mitotic Metaphase and Anaphase | 224 | 9.38e-04 | 3.51e-03 | 0.1560 | 0.064700 | 0.1420 | 9.52e-02 | 2.52e-04 |
| Leishmania infection | 243 | 2.02e-06 | 1.73e-05 | 0.2220 | 0.191000 | 0.1140 | 3.05e-07 | 2.20e-03 |
| ATF6 (ATF6-alpha) activates chaperone genes | 10 | 2.29e-02 | 4.89e-02 | 0.6310 | 0.482000 | 0.4060 | 8.26e-03 | 2.62e-02 |
| Platelet degranulation | 104 | 4.56e-16 | 3.11e-14 | 0.5980 | 0.383000 | 0.4590 | 1.42e-11 | 5.60e-16 |
| Signaling by MET | 60 | 4.00e-06 | 3.03e-05 | 0.4630 | 0.287000 | 0.3630 | 1.19e-04 | 1.14e-06 |
| The NLRP3 inflammasome | 15 | 1.50e-03 | 5.15e-03 | 0.6770 | 0.515000 | 0.4390 | 5.56e-04 | 3.22e-03 |
| Axon guidance | 451 | 4.60e-07 | 4.83e-06 | 0.1630 | 0.071100 | 0.1460 | 9.71e-03 | 9.82e-08 |
| Formation of a pool of free 40S subunits | 99 | 1.98e-03 | 6.58e-03 | 0.2430 | -0.130000 | -0.2050 | 2.56e-02 | 4.19e-04 |
| MAPK family signaling cascades | 267 | 6.89e-07 | 6.71e-06 | 0.2210 | 0.114000 | 0.1890 | 1.29e-03 | 1.00e-07 |
| Apoptotic execution phase | 45 | 1.00e-02 | 2.57e-02 | 0.3190 | 0.185000 | 0.2590 | 3.19e-02 | 2.61e-03 |
| Regulation of mRNA stability by proteins that bind AU-rich elements | 87 | 2.15e-06 | 1.81e-05 | 0.3910 | 0.237000 | 0.3120 | 1.32e-04 | 5.06e-07 |
| Response of EIF2AK4 (GCN2) to amino acid deficiency | 99 | 1.00e-03 | 3.66e-03 | 0.2580 | -0.142000 | -0.2160 | 1.48e-02 | 2.06e-04 |
| Peroxisomal protein import | 57 | 1.96e-02 | 4.33e-02 | 0.2570 | 0.141000 | 0.2140 | 6.55e-02 | 5.11e-03 |
| Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | 29 | 7.17e-03 | 1.94e-02 | 0.4180 | 0.257000 | 0.3300 | 1.67e-02 | 2.09e-03 |
| Selenoamino acid metabolism | 113 | 3.57e-04 | 1.49e-03 | 0.2600 | -0.143000 | -0.2170 | 8.43e-03 | 6.97e-05 |
| Vesicle-mediated transport | 644 | 3.04e-33 | 6.90e-31 | 0.3470 | 0.207000 | 0.2790 | 3.64e-19 | 1.28e-33 |
| G-protein activation | 23 | 6.57e-03 | 1.80e-02 | 0.4770 | 0.371000 | 0.2990 | 2.06e-03 | 1.30e-02 |
| Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) | 93 | 4.02e-04 | 1.65e-03 | 0.2870 | -0.164000 | -0.2360 | 6.29e-03 | 8.33e-05 |
| Syndecan interactions | 19 | 1.44e-02 | 3.41e-02 | 0.4820 | 0.375000 | 0.3030 | 4.68e-03 | 2.23e-02 |
| Diseases associated with the TLR signaling cascade | 23 | 1.11e-05 | 7.23e-05 | 0.7250 | 0.476000 | 0.5480 | 7.78e-05 | 5.43e-06 |
| Diseases of Immune System | 23 | 1.11e-05 | 7.23e-05 | 0.7250 | 0.476000 | 0.5480 | 7.78e-05 | 5.43e-06 |
| Telomere C-strand (Lagging Strand) Synthesis | 34 | 6.69e-04 | 2.61e-03 | 0.4730 | -0.297000 | -0.3680 | 2.70e-03 | 2.04e-04 |
| Degradation of the extracellular matrix | 78 | 9.03e-04 | 3.41e-03 | 0.2990 | 0.173000 | 0.2430 | 8.34e-03 | 2.01e-04 |
| Death Receptor Signalling | 131 | 6.12e-03 | 1.69e-02 | 0.1850 | 0.091200 | 0.1610 | 7.16e-02 | 1.44e-03 |
| Metabolism of polyamines | 57 | 2.19e-05 | 1.29e-04 | 0.4420 | 0.276000 | 0.3460 | 3.18e-04 | 6.38e-06 |
| Transcriptional Regulation by TP53 | 351 | 8.66e-03 | 2.27e-02 | 0.0840 | 0.013400 | 0.0830 | 6.67e-01 | 7.58e-03 |
| Fatty acid metabolism | 150 | 9.61e-04 | 3.58e-03 | 0.2060 | 0.107000 | 0.1760 | 2.36e-02 | 1.93e-04 |
| Integration of energy metabolism | 86 | 4.32e-06 | 3.18e-05 | 0.3840 | 0.235000 | 0.3040 | 1.64e-04 | 1.10e-06 |
| G beta:gamma signalling through PLC beta | 17 | 1.49e-02 | 3.48e-02 | 0.5090 | 0.393000 | 0.3240 | 5.06e-03 | 2.07e-02 |
| Presynaptic function of Kainate receptors | 17 | 1.49e-02 | 3.48e-02 | 0.5090 | 0.393000 | 0.3240 | 5.06e-03 | 2.07e-02 |
| Formation of the cornified envelope | 21 | 1.08e-02 | 2.73e-02 | 0.4740 | 0.368000 | 0.2990 | 3.53e-03 | 1.77e-02 |
| Metabolism of proteins | 1706 | 1.53e-28 | 2.61e-26 | 0.1910 | 0.096700 | 0.1650 | 3.22e-11 | 1.16e-29 |
| PD-1 signaling | 28 | 3.99e-08 | 5.28e-07 | 0.8050 | -0.535000 | -0.6020 | 9.47e-07 | 3.51e-08 |
| Diseases associated with O-glycosylation of proteins | 47 | 1.63e-02 | 3.72e-02 | 0.2960 | -0.240000 | -0.1740 | 4.49e-03 | 3.87e-02 |
| G alpha (z) signalling events | 36 | 8.29e-03 | 2.18e-02 | 0.3700 | 0.227000 | 0.2920 | 1.85e-02 | 2.42e-03 |
| NOTCH1 Intracellular Domain Regulates Transcription | 44 | 2.38e-03 | 7.44e-03 | 0.3760 | 0.231000 | 0.2960 | 7.89e-03 | 6.70e-04 |
| Factors involved in megakaryocyte development and platelet production | 116 | 2.12e-03 | 6.95e-03 | 0.2250 | 0.124000 | 0.1880 | 2.15e-02 | 4.57e-04 |
| Erythrocytes take up carbon dioxide and release oxygen | 11 | 3.19e-05 | 1.76e-04 | 1.0000 | 0.741000 | 0.6770 | 2.08e-05 | 1.02e-04 |
| O2/CO2 exchange in erythrocytes | 11 | 3.19e-05 | 1.76e-04 | 1.0000 | 0.741000 | 0.6770 | 2.08e-05 | 1.02e-04 |
| Signaling by Interleukins | 385 | 1.98e-21 | 2.08e-19 | 0.3590 | 0.220000 | 0.2840 | 1.37e-13 | 1.03e-21 |
| Metabolism | 1758 | 1.90e-30 | 3.71e-28 | 0.1970 | 0.103000 | 0.1680 | 5.85e-13 | 1.29e-31 |
| Ub-specific processing proteases | 169 | 1.26e-05 | 7.92e-05 | 0.2570 | 0.147000 | 0.2110 | 1.01e-03 | 2.30e-06 |
| Viral mRNA Translation | 87 | 2.22e-04 | 9.81e-04 | 0.3130 | -0.187000 | -0.2510 | 2.55e-03 | 5.18e-05 |
| ESR-mediated signaling | 159 | 4.45e-08 | 5.78e-07 | 0.3300 | 0.200000 | 0.2630 | 1.36e-05 | 1.05e-08 |
| Synthesis of PC | 23 | 1.36e-02 | 3.26e-02 | 0.4420 | 0.280000 | 0.3420 | 2.01e-02 | 4.52e-03 |
| Signaling by TGFB family members | 91 | 4.35e-03 | 1.27e-02 | 0.2420 | 0.138000 | 0.1990 | 2.32e-02 | 1.03e-03 |
| Cellular responses to external stimuli | 503 | 9.71e-11 | 2.20e-09 | 0.2110 | 0.116000 | 0.1770 | 9.00e-06 | 1.18e-11 |
| Neurotransmitter receptors and postsynaptic signal transmission | 123 | 2.27e-03 | 7.21e-03 | 0.2180 | 0.121000 | 0.1820 | 2.02e-02 | 4.99e-04 |
| Ion channel transport | 133 | 5.02e-04 | 2.01e-03 | 0.2370 | 0.135000 | 0.1950 | 7.32e-03 | 1.05e-04 |
| Signaling by Leptin | 10 | 2.94e-03 | 9.09e-03 | 0.7890 | 0.587000 | 0.5270 | 1.31e-03 | 3.91e-03 |
| Cellular responses to stress | 497 | 3.56e-10 | 6.75e-09 | 0.2060 | 0.113000 | 0.1730 | 1.71e-05 | 4.43e-11 |
| Signaling by BRAF and RAF fusions | 57 | 9.29e-07 | 8.73e-06 | 0.5070 | 0.328000 | 0.3870 | 1.84e-05 | 4.28e-07 |
| M Phase | 359 | 4.01e-04 | 1.65e-03 | 0.1350 | 0.061800 | 0.1210 | 4.43e-02 | 8.77e-05 |
| Adaptive Immune System | 753 | 5.84e-05 | 3.03e-04 | 0.0947 | 0.031000 | 0.0895 | 1.48e-01 | 2.93e-05 |
| Peptide chain elongation | 87 | 6.28e-05 | 3.21e-04 | 0.3390 | -0.209000 | -0.2670 | 7.58e-04 | 1.68e-05 |
| ATF6 (ATF6-alpha) activates chaperones | 12 | 2.07e-02 | 4.49e-02 | 0.5850 | 0.442000 | 0.3850 | 8.08e-03 | 2.11e-02 |
| Selenocysteine synthesis | 91 | 1.36e-05 | 8.41e-05 | 0.3580 | -0.223000 | -0.2800 | 2.39e-04 | 3.94e-06 |
| ADP signalling through P2Y purinoceptor 1 | 21 | 9.98e-04 | 3.65e-03 | 0.5910 | 0.445000 | 0.3900 | 4.16e-04 | 1.99e-03 |
| Disorders of transmembrane transporters | 144 | 1.02e-03 | 3.71e-03 | 0.2170 | 0.123000 | 0.1780 | 1.07e-02 | 2.20e-04 |
| Interleukin-10 signaling | 35 | 3.16e-03 | 9.71e-03 | 0.4150 | 0.320000 | 0.2650 | 1.06e-03 | 6.63e-03 |
| Signaling by GPCR | 534 | 1.93e-03 | 6.43e-03 | 0.0909 | 0.031300 | 0.0853 | 2.17e-01 | 7.46e-04 |
| Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding | 36 | 3.64e-03 | 1.10e-02 | 0.4040 | 0.312000 | 0.2580 | 1.21e-03 | 7.43e-03 |
| Disease | 1339 | 2.21e-19 | 2.01e-17 | 0.1790 | 0.097100 | 0.1510 | 2.52e-09 | 1.99e-20 |
| Influenza Viral RNA Transcription and Replication | 134 | 2.59e-04 | 1.13e-03 | 0.2500 | -0.148000 | -0.2010 | 3.09e-03 | 5.90e-05 |
| Eukaryotic Translation Elongation | 92 | 7.43e-05 | 3.74e-04 | 0.3280 | -0.204000 | -0.2560 | 7.33e-04 | 2.12e-05 |
| Immune System | 1885 | 2.77e-52 | 1.26e-49 | 0.2640 | 0.158000 | 0.2110 | 4.26e-30 | 4.62e-52 |
| Glucagon signaling in metabolic regulation | 27 | 4.50e-03 | 1.31e-02 | 0.4600 | 0.298000 | 0.3500 | 7.36e-03 | 1.64e-03 |
| MAPK6/MAPK4 signaling | 82 | 3.09e-05 | 1.73e-04 | 0.3640 | 0.230000 | 0.2820 | 3.14e-04 | 1.00e-05 |
| GPCR downstream signalling | 489 | 4.18e-03 | 1.24e-02 | 0.0911 | 0.034100 | 0.0844 | 1.96e-01 | 1.39e-03 |
| Regulation of TLR by endogenous ligand | 11 | 1.12e-05 | 7.28e-05 | 1.0500 | 0.770000 | 0.7200 | 9.70e-06 | 3.51e-05 |
| Cytokine Signaling in Immune system | 733 | 2.08e-08 | 2.95e-07 | 0.1520 | 0.079500 | 0.1290 | 2.46e-04 | 2.71e-09 |
| Thrombin signalling through proteinase activated receptors (PARs) | 27 | 2.29e-03 | 7.24e-03 | 0.4890 | 0.320000 | 0.3690 | 4.00e-03 | 8.92e-04 |
| Signaling by ERBB4 | 44 | 1.61e-02 | 3.71e-02 | 0.3120 | 0.195000 | 0.2440 | 2.53e-02 | 5.15e-03 |
| Innate Immune System | 963 | 6.13e-91 | 4.18e-88 | 0.4870 | 0.319000 | 0.3680 | 1.70e-63 | 7.54e-84 |
| Neuronal System | 253 | 4.30e-03 | 1.26e-02 | 0.1410 | 0.073000 | 0.1210 | 4.56e-02 | 9.62e-04 |
| Interferon Signaling | 177 | 1.99e-03 | 6.59e-03 | 0.1860 | -0.153000 | -0.1050 | 4.45e-04 | 1.55e-02 |
| GRB2 events in EGFR signaling | 10 | 1.35e-02 | 3.26e-02 | 0.6780 | 0.502000 | 0.4560 | 5.98e-03 | 1.25e-02 |
| Eukaryotic Translation Termination | 91 | 1.20e-04 | 5.68e-04 | 0.3230 | -0.205000 | -0.2490 | 7.40e-04 | 3.93e-05 |
| Oxidative Stress Induced Senescence | 79 | 3.32e-05 | 1.80e-04 | 0.3710 | 0.240000 | 0.2840 | 2.31e-04 | 1.29e-05 |
| Costimulation by the CD28 family | 74 | 7.37e-04 | 2.86e-03 | 0.3200 | -0.247000 | -0.2030 | 2.39e-04 | 2.53e-03 |
| Transport of small molecules | 554 | 6.00e-15 | 3.03e-13 | 0.2500 | 0.154000 | 0.1960 | 5.35e-10 | 2.54e-15 |
| Mitochondrial biogenesis | 88 | 7.30e-03 | 1.97e-02 | 0.2400 | 0.147000 | 0.1890 | 1.69e-02 | 2.12e-03 |
| IRAK4 deficiency (TLR2/4) | 10 | 8.78e-07 | 8.31e-06 | 1.2200 | 0.845000 | 0.8860 | 3.74e-06 | 1.20e-06 |
| MyD88 deficiency (TLR2/4) | 10 | 8.78e-07 | 8.31e-06 | 1.2200 | 0.845000 | 0.8860 | 3.74e-06 | 1.20e-06 |
| Iron uptake and transport | 52 | 2.37e-06 | 1.95e-05 | 0.5160 | 0.385000 | 0.3430 | 1.57e-06 | 1.84e-05 |
| Signal amplification | 28 | 3.40e-05 | 1.84e-04 | 0.6270 | 0.464000 | 0.4220 | 2.16e-05 | 1.09e-04 |
| tRNA processing | 136 | 2.02e-04 | 9.01e-04 | 0.2560 | -0.161000 | -0.1990 | 1.22e-03 | 6.13e-05 |
| Prefoldin mediated transfer of substrate to CCT/TriC | 26 | 2.03e-02 | 4.43e-02 | 0.3990 | 0.263000 | 0.3000 | 2.03e-02 | 8.02e-03 |
| Influenza Infection | 153 | 3.42e-03 | 1.04e-02 | 0.1950 | -0.118000 | -0.1550 | 1.17e-02 | 9.20e-04 |
| SHC1 events in EGFR signaling | 11 | 1.54e-02 | 3.56e-02 | 0.6380 | 0.432000 | 0.4690 | 1.30e-02 | 7.07e-03 |
| Defects of contact activation system (CAS) and kallikrein/kinin system (KKS) | 12 | 1.45e-02 | 3.43e-02 | 0.6150 | 0.416000 | 0.4530 | 1.26e-02 | 6.64e-03 |
| Diseases of hemostasis | 12 | 1.45e-02 | 3.43e-02 | 0.6150 | 0.416000 | 0.4530 | 1.26e-02 | 6.64e-03 |
| Transferrin endocytosis and recycling | 26 | 1.93e-05 | 1.16e-04 | 0.6700 | 0.457000 | 0.4890 | 5.48e-05 | 1.56e-05 |
| ROS and RNS production in phagocytes | 31 | 1.32e-08 | 1.96e-07 | 0.7930 | 0.577000 | 0.5450 | 2.73e-08 | 1.53e-07 |
| Activation of GABAB receptors | 31 | 1.46e-02 | 3.44e-02 | 0.3810 | 0.253000 | 0.2850 | 1.47e-02 | 6.03e-03 |
| GABA B receptor activation | 31 | 1.46e-02 | 3.44e-02 | 0.3810 | 0.253000 | 0.2850 | 1.47e-02 | 6.03e-03 |
| Sphingolipid de novo biosynthesis | 42 | 1.86e-02 | 4.11e-02 | 0.3180 | 0.208000 | 0.2400 | 1.96e-02 | 7.17e-03 |
| Infectious disease | 773 | 2.73e-10 | 5.39e-09 | 0.1740 | 0.106000 | 0.1380 | 5.11e-07 | 7.52e-11 |
| G alpha (i) signalling events | 243 | 1.93e-02 | 4.27e-02 | 0.1270 | 0.073800 | 0.1040 | 4.75e-02 | 5.28e-03 |
| HCMV Infection | 96 | 4.71e-03 | 1.36e-02 | 0.2430 | 0.156000 | 0.1860 | 8.23e-03 | 1.64e-03 |
| Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation | 36 | 8.78e-03 | 2.28e-02 | 0.3750 | 0.250000 | 0.2790 | 9.50e-03 | 3.71e-03 |
| Extracellular matrix organization | 215 | 1.18e-05 | 7.47e-05 | 0.2370 | 0.152000 | 0.1810 | 1.22e-04 | 4.54e-06 |
| EPHB-mediated forward signaling | 32 | 4.26e-07 | 4.63e-06 | 0.7020 | 0.482000 | 0.5110 | 2.40e-06 | 5.70e-07 |
| RNA Polymerase II Transcription | 1197 | 1.43e-04 | 6.59e-04 | 0.0847 | -0.072300 | -0.0441 | 2.57e-05 | 1.03e-02 |
| HCMV Late Events | 69 | 1.32e-02 | 3.18e-02 | 0.2580 | 0.168000 | 0.1960 | 1.57e-02 | 4.94e-03 |
| Transmission across Chemical Synapses | 170 | 3.63e-03 | 1.10e-02 | 0.1860 | 0.117000 | 0.1450 | 8.33e-03 | 1.14e-03 |
| TNFR2 non-canonical NF-kB pathway | 95 | 1.16e-02 | 2.87e-02 | 0.2230 | 0.170000 | 0.1430 | 4.10e-03 | 1.59e-02 |
| Generic Transcription Pathway | 1078 | 4.82e-06 | 3.46e-05 | 0.1080 | -0.088800 | -0.0619 | 8.57e-07 | 6.01e-04 |
| Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) | 113 | 4.86e-03 | 1.39e-02 | 0.2230 | -0.144000 | -0.1710 | 8.12e-03 | 1.72e-03 |
| Nonsense-Mediated Decay (NMD) | 113 | 4.86e-03 | 1.39e-02 | 0.2230 | -0.144000 | -0.1710 | 8.12e-03 | 1.72e-03 |
| Glucagon-like Peptide-1 (GLP1) regulates insulin secretion | 32 | 7.60e-03 | 2.03e-02 | 0.4040 | 0.299000 | 0.2720 | 3.47e-03 | 7.65e-03 |
| GABA receptor activation | 36 | 1.27e-02 | 3.10e-02 | 0.3600 | 0.242000 | 0.2670 | 1.19e-02 | 5.60e-03 |
| Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways | 51 | 1.69e-04 | 7.70e-04 | 0.4280 | 0.314000 | 0.2900 | 1.04e-04 | 3.36e-04 |
| Phosphorylation of CD3 and TCR zeta chains | 27 | 2.11e-07 | 2.39e-06 | 0.7830 | -0.564000 | -0.5420 | 3.81e-07 | 1.07e-06 |
| Extension of Telomeres | 51 | 1.76e-03 | 5.98e-03 | 0.3650 | -0.247000 | -0.2690 | 2.25e-03 | 8.90e-04 |
| Extra-nuclear estrogen signaling | 65 | 9.00e-04 | 3.41e-03 | 0.3400 | 0.251000 | 0.2300 | 4.77e-04 | 1.31e-03 |
| Integrin cell surface interactions | 52 | 1.56e-02 | 3.61e-02 | 0.2930 | 0.217000 | 0.1970 | 6.86e-03 | 1.41e-02 |
| Interleukin-12 signaling | 44 | 1.99e-02 | 4.36e-02 | 0.3090 | 0.208000 | 0.2280 | 1.68e-02 | 8.81e-03 |
| Fanconi Anemia Pathway | 36 | 1.41e-03 | 4.92e-03 | 0.4430 | -0.323000 | -0.3030 | 8.11e-04 | 1.64e-03 |
| Aquaporin-mediated transport | 38 | 2.08e-03 | 6.89e-03 | 0.4180 | 0.305000 | 0.2860 | 1.16e-03 | 2.26e-03 |
| Growth hormone receptor signaling | 20 | 6.20e-03 | 1.71e-02 | 0.5230 | 0.361000 | 0.3780 | 5.17e-03 | 3.41e-03 |
| Transport of bile salts and organic acids, metal ions and amine compounds | 55 | 2.29e-02 | 4.89e-02 | 0.2710 | 0.183000 | 0.2000 | 1.87e-02 | 1.02e-02 |
| Hemostasis | 542 | 1.80e-22 | 2.45e-20 | 0.3190 | 0.217000 | 0.2330 | 4.53e-18 | 1.78e-20 |
| Insulin receptor recycling | 21 | 1.06e-05 | 7.03e-05 | 0.7660 | 0.535000 | 0.5490 | 2.22e-05 | 1.32e-05 |
| p130Cas linkage to MAPK signaling for integrins | 11 | 2.21e-04 | 9.81e-04 | 0.9080 | 0.649000 | 0.6350 | 1.94e-04 | 2.66e-04 |
| Formation of Fibrin Clot (Clotting Cascade) | 26 | 1.16e-02 | 2.87e-02 | 0.4300 | 0.311000 | 0.2970 | 6.12e-03 | 8.80e-03 |
| Unwinding of DNA | 12 | 4.41e-04 | 1.81e-03 | 0.8330 | -0.582000 | -0.5950 | 4.80e-04 | 3.55e-04 |
| Gene expression (Transcription) | 1325 | 3.15e-05 | 1.76e-04 | 0.0934 | -0.072000 | -0.0595 | 1.09e-05 | 2.77e-04 |
| Resolution of Abasic Sites (AP sites) | 37 | 3.27e-03 | 1.00e-02 | 0.4080 | -0.283000 | -0.2940 | 2.90e-03 | 1.95e-03 |
| Selective autophagy | 57 | 5.52e-03 | 1.55e-02 | 0.3140 | 0.216000 | 0.2270 | 4.70e-03 | 3.05e-03 |
| Glycerophospholipid biosynthesis | 106 | 1.39e-05 | 8.60e-05 | 0.3380 | 0.234000 | 0.2430 | 3.09e-05 | 1.52e-05 |
| Signaling by SCF-KIT | 40 | 6.99e-03 | 1.90e-02 | 0.3660 | 0.254000 | 0.2630 | 5.39e-03 | 4.02e-03 |
| mTORC1-mediated signalling | 24 | 1.23e-03 | 4.36e-03 | 0.5490 | 0.384000 | 0.3920 | 1.13e-03 | 8.90e-04 |
| Regulation of insulin secretion | 60 | 7.52e-04 | 2.91e-03 | 0.3600 | 0.251000 | 0.2580 | 7.80e-04 | 5.51e-04 |
| Signaling by Insulin receptor | 59 | 1.25e-04 | 5.86e-04 | 0.4060 | 0.284000 | 0.2900 | 1.62e-04 | 1.19e-04 |
| Stimuli-sensing channels | 72 | 1.99e-02 | 4.36e-02 | 0.2420 | 0.174000 | 0.1680 | 1.06e-02 | 1.35e-02 |
| MET promotes cell motility | 26 | 1.78e-02 | 3.98e-02 | 0.4090 | 0.286000 | 0.2920 | 1.15e-02 | 1.01e-02 |
| Interleukin-12 family signaling | 53 | 1.12e-02 | 2.79e-02 | 0.3020 | 0.212000 | 0.2160 | 7.53e-03 | 6.64e-03 |
| Vasopressin regulates renal water homeostasis via Aquaporins | 34 | 4.56e-03 | 1.32e-02 | 0.4130 | 0.294000 | 0.2910 | 3.05e-03 | 3.30e-03 |
| Synthesis of active ubiquitin: roles of E1 and E2 enzymes | 30 | 3.38e-04 | 1.43e-03 | 0.5360 | 0.380000 | 0.3780 | 3.17e-04 | 3.37e-04 |
| Dissolution of Fibrin Clot | 12 | 1.84e-03 | 6.22e-03 | 0.7520 | 0.531000 | 0.5330 | 1.45e-03 | 1.40e-03 |
| Transcriptional regulation of granulopoiesis | 46 | 9.38e-07 | 8.75e-06 | 0.5710 | 0.403000 | 0.4040 | 2.21e-06 | 2.18e-06 |
CD22 mediated BCR regulation
| metric | value |
|---|---|
| setSize | 58 |
| pMANOVA | 1.55e-15 |
| p.adjustMANOVA | 9.58e-14 |
| s.dist | 0.4 |
| s.low.CRP | 0.197 |
| s.high.CRP | -0.348 |
| p.low.CRP | 0.00956 |
| p.high.CRP | 4.59e-06 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGHV3-48 | 3183 | -4340 |
| low CRP | high CRP | |
|---|---|---|
| CD22 | -3032 | -4243 |
| CD79A | -3264 | -4267 |
| CD79B | -6240 | -6157 |
| IGHD | -2028 | -4193 |
| IGHM | 1890 | -2470 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| LYN | 7575 | 8379 |
| PTPN6 | -691 | 7862 |
VLDLR internalisation and degradation
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.000128 |
| p.adjustMANOVA | 6e-04 |
| s.dist | 0.642 |
| s.low.CRP | 0.0954 |
| s.high.CRP | 0.635 |
| p.low.CRP | 0.584 |
| p.high.CRP | 0.000266 |
| Gene | low CRP | high CRP |
|---|---|---|
| CLTC | 9376 | 9720 |
| CLTA | 8416 | 8998 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| NR1H2 | 4003 | 8448 |
| AP2A2 | 3196 | 9217 |
| low CRP | high CRP | |
|---|---|---|
| AP2A1 | -3194 | 9104 |
| AP2A2 | 3196 | 9217 |
| AP2B1 | -9145 | 2444 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| CLTA | 8416 | 8998 |
| CLTC | 9376 | 9720 |
| MYLIP | -4440 | -1671 |
| NR1H2 | 4003 | 8448 |
| NR1H3 | -8939 | 2196 |
| VLDLR | -9564 | 1877 |
Scavenging of heme from plasma
| metric | value |
|---|---|
| setSize | 70 |
| pMANOVA | 2.16e-17 |
| p.adjustMANOVA | 1.73e-15 |
| s.dist | 0.376 |
| s.low.CRP | 0.25 |
| s.high.CRP | -0.28 |
| p.low.CRP | 0.000292 |
| p.high.CRP | 5.05e-05 |
| Gene | low CRP | high CRP |
|---|---|---|
| JCHAIN | 4874 | -8700 |
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGHA1 | 4926 | -5918 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| low CRP | high CRP | |
|---|---|---|
| ALB | 1254 | 3551 |
| APOL1 | -7427 | -4732 |
| CD163 | 10038 | 10038 |
| HBA1 | 10009 | 8734 |
| HBB | 10013 | 8750 |
| HP | 9925 | 10000 |
| HPX | 477 | -1968 |
| IGHA1 | 4926 | -5918 |
| IGHA2 | 2335 | -2345 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| JCHAIN | 4874 | -8700 |
| LRP1 | 9226 | 9878 |
Classical antibody-mediated complement activation
| metric | value |
|---|---|
| setSize | 68 |
| pMANOVA | 7.31e-15 |
| p.adjustMANOVA | 3.56e-13 |
| s.dist | 0.366 |
| s.low.CRP | 0.161 |
| s.high.CRP | -0.328 |
| p.low.CRP | 0.0216 |
| p.high.CRP | 2.87e-06 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| IGKV4-1 | 2812 | -4988 |
| low CRP | high CRP | |
|---|---|---|
| C1QA | -49 | 7890 |
| C1QB | 6746 | 8930 |
| C1QC | 7805 | 9340 |
| C1R | -10393 | -4020 |
| C1S | -6159 | 552 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
Creation of C4 and C2 activators
| metric | value |
|---|---|
| setSize | 70 |
| pMANOVA | 4.1e-15 |
| p.adjustMANOVA | 2.43e-13 |
| s.dist | 0.359 |
| s.low.CRP | 0.174 |
| s.high.CRP | -0.314 |
| p.low.CRP | 0.0118 |
| p.high.CRP | 5.41e-06 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| MASP2 | 2089 | -6883 |
| low CRP | high CRP | |
|---|---|---|
| C1QA | -49 | 7890 |
| C1QB | 6746 | 8930 |
| C1QC | 7805 | 9340 |
| C1R | -10393 | -4020 |
| C1S | -6159 | 552 |
| FCN1 | 9889 | 9103 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| MASP2 | 2089 | -6883 |
Pre-NOTCH Processing in Golgi
| metric | value |
|---|---|
| setSize | 18 |
| pMANOVA | 2.8e-05 |
| p.adjustMANOVA | 0.000161 |
| s.dist | 0.522 |
| s.low.CRP | 0.0479 |
| s.high.CRP | 0.519 |
| p.low.CRP | 0.725 |
| p.high.CRP | 0.000136 |
| Gene | low CRP | high CRP |
|---|---|---|
| FURIN | 8111 | 10053 |
| RAB6A | 8487 | 8616 |
| ATP2A2 | 8393 | 8341 |
| RFNG | 7041 | 8287 |
| SEL1L | 7157 | 7252 |
| ST3GAL6 | 9317 | 5155 |
| TMED2 | 6426 | 6360 |
| NOTCH2 | 4412 | 6414 |
| ST3GAL3 | 2775 | 828 |
| low CRP | high CRP | |
|---|---|---|
| ATP2A1 | -4808 | -3244 |
| ATP2A2 | 8393 | 8341 |
| ATP2A3 | -9252 | 3112 |
| B4GALT1 | -4177 | 7099 |
| FURIN | 8111 | 10053 |
| LFNG | -9497 | -3283 |
| MFNG | -7860 | -990 |
| NOTCH1 | -6446 | 6708 |
| NOTCH2 | 4412 | 6414 |
| NOTCH3 | -744 | 9587 |
| NOTCH4 | -10586 | 1602 |
| RAB6A | 8487 | 8616 |
| RFNG | 7041 | 8287 |
| SEL1L | 7157 | 7252 |
| ST3GAL3 | 2775 | 828 |
| ST3GAL4 | -9921 | 7993 |
| ST3GAL6 | 9317 | 5155 |
| TMED2 | 6426 | 6360 |
tRNA processing in the mitochondrion
| metric | value |
|---|---|
| setSize | 32 |
| pMANOVA | 1.76e-07 |
| p.adjustMANOVA | 2.05e-06 |
| s.dist | 0.41 |
| s.low.CRP | -0.405 |
| s.high.CRP | 0.0665 |
| p.low.CRP | 7.36e-05 |
| p.high.CRP | 0.515 |
| Gene | low CRP | high CRP |
|---|---|---|
| MT-ATP8 | -8699 | 3719 |
| MT-TM | -9490 | 3091 |
| MT-TS1 | -9189 | 3187 |
| MT-TN | -10118 | 2887 |
| MT-TC | -9974 | 2498 |
| MT-TA | -9601 | 1837 |
| MT-ND4L | -6001 | 1900 |
| MT-ATP6 | -6161 | 1833 |
| MT-TL1 | -8729 | 1284 |
| MT-TF | -8605 | 1267 |
| MT-TY | -10274 | 1051 |
| MT-TV | -9270 | 940 |
| HSD17B10 | -1197 | 6037 |
| MT-CO2 | -1994 | 1965 |
| MT-CO3 | -1724 | 2140 |
| MT-RNR2 | -373 | 3642 |
| MT-RNR1 | -1023 | 1206 |
| MT-ND5 | -3288 | 283 |
| low CRP | high CRP | |
|---|---|---|
| ELAC2 | -10756 | -5453 |
| HSD17B10 | -1197 | 6037 |
| MT-ATP6 | -6161 | 1833 |
| MT-ATP8 | -8699 | 3719 |
| MT-CO1 | 575 | 1906 |
| MT-CO2 | -1994 | 1965 |
| MT-CO3 | -1724 | 2140 |
| MT-CYB | -2748 | -78 |
| MT-ND1 | -3881 | -1394 |
| MT-ND2 | -6369 | -3767 |
| MT-ND3 | -4723 | -1060 |
| MT-ND4 | 1457 | 1379 |
| MT-ND4L | -6001 | 1900 |
| MT-ND5 | -3288 | 283 |
| MT-ND6 | 2811 | 366 |
| MT-RNR1 | -1023 | 1206 |
| MT-RNR2 | -373 | 3642 |
| MT-TA | -9601 | 1837 |
| MT-TC | -9974 | 2498 |
| MT-TE | -8792 | -2538 |
| MT-TF | -8605 | 1267 |
| MT-TL1 | -8729 | 1284 |
| MT-TL2 | -9294 | -2861 |
| MT-TM | -9490 | 3091 |
| MT-TN | -10118 | 2887 |
| MT-TP | -11154 | -11088 |
| MT-TS1 | -9189 | 3187 |
| MT-TV | -9270 | 940 |
| MT-TY | -10274 | 1051 |
| PRORP | 5623 | 3349 |
| TRMT10C | 4825 | -5987 |
| TRNT1 | 1209 | -8693 |
Role of LAT2/NTAL/LAB on calcium mobilization
| metric | value |
|---|---|
| setSize | 73 |
| pMANOVA | 4.31e-14 |
| p.adjustMANOVA | 1.78e-12 |
| s.dist | 0.329 |
| s.low.CRP | 0.23 |
| s.high.CRP | -0.236 |
| p.low.CRP | 0.000684 |
| p.high.CRP | 0.000498 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| SOS1 | 3534 | -7412 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| low CRP | high CRP | |
|---|---|---|
| FYN | -10878 | -6729 |
| GAB2 | 7546 | 9347 |
| GRB2 | 9631 | 9985 |
| IGHE | -498 | -5753 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| LAT2 | 8582 | 9705 |
| LYN | 7575 | 8379 |
| PDPK1 | 2392 | 7816 |
| PIK3CA | 6889 | 4182 |
| PIK3CB | 9838 | 9248 |
| PIK3R1 | -7197 | -8942 |
| PIK3R2 | 2459 | 5820 |
| SHC1 | -3416 | 5815 |
| SOS1 | 3534 | -7412 |
| SYK | 9464 | 9848 |
Nucleobase biosynthesis
| metric | value |
|---|---|
| setSize | 13 |
| pMANOVA | 0.00193 |
| p.adjustMANOVA | 0.00645 |
| s.dist | 0.418 |
| s.low.CRP | 0.0473 |
| s.high.CRP | -0.416 |
| p.low.CRP | 0.768 |
| p.high.CRP | 0.00946 |
| Gene | low CRP | high CRP |
|---|---|---|
| PAICS | 6998 | -9059 |
| DHODH | 42 | -5669 |
| low CRP | high CRP | |
|---|---|---|
| ADSL | 8290 | 4286 |
| ATIC | -4273 | -10792 |
| CAD | -3235 | -8762 |
| DHODH | 42 | -5669 |
| GART | -2276 | -559 |
| GMPS | -352 | -3659 |
| IMPDH1 | 9819 | 9891 |
| IMPDH2 | -3563 | -10154 |
| LHPP | 2376 | 219 |
| PAICS | 6998 | -9059 |
| PFAS | -7982 | -10250 |
| PPAT | -2697 | -11066 |
| UMPS | -4083 | -9494 |
FCGR activation
| metric | value |
|---|---|
| setSize | 75 |
| pMANOVA | 3.32e-14 |
| p.adjustMANOVA | 1.43e-12 |
| s.dist | 0.342 |
| s.low.CRP | 0.143 |
| s.high.CRP | -0.311 |
| p.low.CRP | 0.0322 |
| p.high.CRP | 3.24e-06 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| IGKV4-1 | 2812 | -4988 |
| low CRP | high CRP | |
|---|---|---|
| CD247 | -11271 | -10327 |
| CD3G | -9054 | -10504 |
| FCGR1A | 9965 | 9575 |
| FCGR2A | 9414 | 9249 |
| FCGR3A | -11272 | -4672 |
| FGR | 6254 | 9666 |
| FYN | -10878 | -6729 |
| HCK | 9286 | 9494 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| LYN | 7575 | 8379 |
| SRC | -6857 | -7229 |
| SYK | 9464 | 9848 |
| YES1 | -11138 | -8566 |
Initial triggering of complement
| metric | value |
|---|---|
| setSize | 77 |
| pMANOVA | 3.37e-14 |
| p.adjustMANOVA | 1.43e-12 |
| s.dist | 0.332 |
| s.low.CRP | 0.158 |
| s.high.CRP | -0.292 |
| p.low.CRP | 0.0165 |
| p.high.CRP | 9.18e-06 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| MASP2 | 2089 | -6883 |
| low CRP | high CRP | |
|---|---|---|
| C1QA | -49 | 7890 |
| C1QB | 6746 | 8930 |
| C1QC | 7805 | 9340 |
| C1R | -10393 | -4020 |
| C1S | -6159 | 552 |
| C2 | 6634 | 2959 |
| C3 | -11179 | -10489 |
| C4A | 5060 | 4740 |
| C4B | 6359 | 2884 |
| CFB | -3014 | -2968 |
| CFD | 2998 | 2390 |
| FCN1 | 9889 | 9103 |
| GZMM | -11118 | -8768 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| MASP2 | 2089 | -6883 |
Purine ribonucleoside monophosphate biosynthesis
| metric | value |
|---|---|
| setSize | 10 |
| pMANOVA | 0.0167 |
| p.adjustMANOVA | 0.0381 |
| s.dist | 0.351 |
| s.low.CRP | 0.113 |
| s.high.CRP | -0.332 |
| p.low.CRP | 0.535 |
| p.high.CRP | 0.0688 |
| Gene | low CRP | high CRP |
|---|---|---|
| PAICS | 6998 | -9059 |
| low CRP | high CRP | |
|---|---|---|
| ADSL | 8290 | 4286 |
| ATIC | -4273 | -10792 |
| GART | -2276 | -559 |
| GMPS | -352 | -3659 |
| IMPDH1 | 9819 | 9891 |
| IMPDH2 | -3563 | -10154 |
| LHPP | 2376 | 219 |
| PAICS | 6998 | -9059 |
| PFAS | -7982 | -10250 |
| PPAT | -2697 | -11066 |
N-Glycan antennae elongation
| metric | value |
|---|---|
| setSize | 13 |
| pMANOVA | 0.00413 |
| p.adjustMANOVA | 0.0122 |
| s.dist | 0.383 |
| s.low.CRP | -0.378 |
| s.high.CRP | 0.0609 |
| p.low.CRP | 0.0182 |
| p.high.CRP | 0.704 |
| Gene | low CRP | high CRP |
|---|---|---|
| ST3GAL4 | -9921 | 7993 |
| B4GALT4 | -9971 | 3971 |
| B4GALT1 | -4177 | 7099 |
| low CRP | high CRP | |
|---|---|---|
| B4GALT1 | -4177 | 7099 |
| B4GALT2 | -7253 | -2349 |
| B4GALT3 | -9162 | -7981 |
| B4GALT4 | -9971 | 3971 |
| B4GALT5 | 8862 | 9469 |
| B4GALT6 | -10936 | -1047 |
| MGAT4A | -3305 | -4301 |
| MGAT4B | 9276 | 9187 |
| MGAT4C | 3599 | -4032 |
| MGAT5 | -5440 | -102 |
| ST3GAL4 | -9921 | 7993 |
| ST6GAL1 | -10673 | -10107 |
| ST8SIA6 | -10982 | -6606 |
Metabolism of amine-derived hormones
| metric | value |
|---|---|
| setSize | 10 |
| pMANOVA | 0.018 |
| p.adjustMANOVA | 0.0401 |
| s.dist | 0.38 |
| s.low.CRP | 0.0466 |
| s.high.CRP | -0.378 |
| p.low.CRP | 0.799 |
| p.high.CRP | 0.0387 |
| Gene | low CRP | high CRP |
|---|---|---|
| TPO | 7263 | -6039 |
| SLC5A5 | 4358 | -8309 |
| DIO1 | 4371 | -5489 |
| IYD | 6285 | -3433 |
| low CRP | high CRP | |
|---|---|---|
| AANAT | -3281 | 1887 |
| DBH | -5056 | -10427 |
| DIO1 | 4371 | -5489 |
| DUOX1 | -9681 | -9527 |
| IYD | 6285 | -3433 |
| PNMT | -4884 | 1572 |
| SLC5A5 | 4358 | -8309 |
| TPH1 | -2180 | -9746 |
| TPH2 | 2016 | 3522 |
| TPO | 7263 | -6039 |
Binding and Uptake of Ligands by Scavenger Receptors
| metric | value |
|---|---|
| setSize | 91 |
| pMANOVA | 9.23e-15 |
| p.adjustMANOVA | 4.34e-13 |
| s.dist | 0.314 |
| s.low.CRP | 0.28 |
| s.high.CRP | -0.142 |
| p.low.CRP | 3.95e-06 |
| p.high.CRP | 0.019 |
| Gene | low CRP | high CRP |
|---|---|---|
| JCHAIN | 4874 | -8700 |
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGHA1 | 4926 | -5918 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| low CRP | high CRP | |
|---|---|---|
| ALB | 1254 | 3551 |
| APOE | -5022 | 1771 |
| APOL1 | -7427 | -4732 |
| CALR | 6685 | 6374 |
| CD163 | 10038 | 10038 |
| CD36 | 10064 | 9814 |
| COL1A2 | 5690 | 684 |
| COL4A2 | 1717 | 838 |
| COLEC12 | -5943 | -2495 |
| FTH1 | 3543 | 5337 |
| FTL | 8704 | 9324 |
| HBA1 | 10009 | 8734 |
| HBB | 10013 | 8750 |
| HP | 9925 | 10000 |
| HPX | 477 | -1968 |
| HSP90AA1 | 5309 | 410 |
| HSP90B1 | 7042 | 372 |
| HSPH1 | -1504 | -8662 |
| HYOU1 | -6582 | 2512 |
| IGHA1 | 4926 | -5918 |
| IGHA2 | 2335 | -2345 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| JCHAIN | 4874 | -8700 |
| LRP1 | 9226 | 9878 |
| MARCO | 6219 | 9851 |
| MSR1 | -528 | 1494 |
| SCARB1 | 7210 | 6035 |
| SCARF1 | 6500 | -1228 |
| SCGB3A2 | 718 | -1063 |
| SPARC | 9073 | 7195 |
| SSC5D | -3756 | -4645 |
| STAB1 | 10077 | 10111 |
| STAB2 | 7035 | 5388 |
Pausing and recovery of Tat-mediated HIV elongation
| metric | value |
|---|---|
| setSize | 30 |
| pMANOVA | 2e-05 |
| p.adjustMANOVA | 0.000119 |
| s.dist | 0.325 |
| s.low.CRP | -0.118 |
| s.high.CRP | 0.303 |
| p.low.CRP | 0.264 |
| p.high.CRP | 0.0041 |
| Gene | low CRP | high CRP |
|---|---|---|
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| NELFB | -8446 | 5056 |
| POLR2G | -5778 | 6576 |
| NELFE | -4877 | 6342 |
| ELL | -4094 | 6433 |
| POLR2A | -8726 | 2901 |
| GTF2F1 | -3109 | 7342 |
| SUPT4H1 | -3945 | 5159 |
| POLR2F | -2307 | 6746 |
| POLR2C | -2183 | 3527 |
| POLR2I | -2123 | 2695 |
| POLR2B | -1034 | 188 |
| low CRP | high CRP | |
|---|---|---|
| CCNT1 | -8231 | -6368 |
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| ELL | -4094 | 6433 |
| ELOA | 8918 | 6756 |
| ELOB | 4867 | 8716 |
| ELOC | 6598 | 8484 |
| GTF2F1 | -3109 | 7342 |
| GTF2F2 | 4728 | 6017 |
| NELFA | -2921 | -970 |
| NELFB | -8446 | 5056 |
| NELFCD | -3646 | -4090 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| POLR2B | -1034 | 188 |
| POLR2C | -2183 | 3527 |
| POLR2D | 3401 | -4083 |
| POLR2E | 6766 | 8343 |
| POLR2F | -2307 | 6746 |
| POLR2G | -5778 | 6576 |
| POLR2H | 653 | -2264 |
| POLR2I | -2123 | 2695 |
| POLR2J | 4448 | 7822 |
| POLR2K | 1881 | -1885 |
| POLR2L | 126 | 7246 |
| SSRP1 | -9188 | -7998 |
| SUPT16H | -8035 | -9349 |
| SUPT4H1 | -3945 | 5159 |
| SUPT5H | -7894 | -1035 |
| TCEA1 | 5155 | -1614 |
Tat-mediated HIV elongation arrest and recovery
| metric | value |
|---|---|
| setSize | 30 |
| pMANOVA | 2e-05 |
| p.adjustMANOVA | 0.000119 |
| s.dist | 0.325 |
| s.low.CRP | -0.118 |
| s.high.CRP | 0.303 |
| p.low.CRP | 0.264 |
| p.high.CRP | 0.0041 |
| Gene | low CRP | high CRP |
|---|---|---|
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| NELFB | -8446 | 5056 |
| POLR2G | -5778 | 6576 |
| NELFE | -4877 | 6342 |
| ELL | -4094 | 6433 |
| POLR2A | -8726 | 2901 |
| GTF2F1 | -3109 | 7342 |
| SUPT4H1 | -3945 | 5159 |
| POLR2F | -2307 | 6746 |
| POLR2C | -2183 | 3527 |
| POLR2I | -2123 | 2695 |
| POLR2B | -1034 | 188 |
| low CRP | high CRP | |
|---|---|---|
| CCNT1 | -8231 | -6368 |
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| ELL | -4094 | 6433 |
| ELOA | 8918 | 6756 |
| ELOB | 4867 | 8716 |
| ELOC | 6598 | 8484 |
| GTF2F1 | -3109 | 7342 |
| GTF2F2 | 4728 | 6017 |
| NELFA | -2921 | -970 |
| NELFB | -8446 | 5056 |
| NELFCD | -3646 | -4090 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| POLR2B | -1034 | 188 |
| POLR2C | -2183 | 3527 |
| POLR2D | 3401 | -4083 |
| POLR2E | 6766 | 8343 |
| POLR2F | -2307 | 6746 |
| POLR2G | -5778 | 6576 |
| POLR2H | 653 | -2264 |
| POLR2I | -2123 | 2695 |
| POLR2J | 4448 | 7822 |
| POLR2K | 1881 | -1885 |
| POLR2L | 126 | 7246 |
| SSRP1 | -9188 | -7998 |
| SUPT16H | -8035 | -9349 |
| SUPT4H1 | -3945 | 5159 |
| SUPT5H | -7894 | -1035 |
| TCEA1 | 5155 | -1614 |
Class C/3 (Metabotropic glutamate/pheromone receptors)
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.012 |
| p.adjustMANOVA | 0.0294 |
| s.dist | 0.398 |
| s.low.CRP | 0.0167 |
| s.high.CRP | -0.398 |
| p.low.CRP | 0.924 |
| p.high.CRP | 0.0223 |
| Gene | low CRP | high CRP |
|---|---|---|
| TAS2R5 | 2711 | -8268 |
| GABBR1 | 3026 | -4023 |
| TAS2R14 | 5608 | -1571 |
| TAS1R3 | 2681 | -2430 |
| TAS2R3 | 825 | -5793 |
| TAS2R20 | 441 | -5135 |
| TAS2R30 | 192 | -4431 |
| low CRP | high CRP | |
|---|---|---|
| CASR | -8364 | -2828 |
| GABBR1 | 3026 | -4023 |
| GRM2 | -9939 | -9829 |
| GRM6 | -660 | -1013 |
| TAS1R3 | 2681 | -2430 |
| TAS2R14 | 5608 | -1571 |
| TAS2R20 | 441 | -5135 |
| TAS2R3 | 825 | -5793 |
| TAS2R30 | 192 | -4431 |
| TAS2R4 | -907 | -7649 |
| TAS2R5 | 2711 | -8268 |
Regulation of TP53 Activity through Acetylation
| metric | value |
|---|---|
| setSize | 29 |
| pMANOVA | 8.63e-06 |
| p.adjustMANOVA | 5.77e-05 |
| s.dist | 0.4 |
| s.low.CRP | -0.4 |
| s.high.CRP | 0.0133 |
| p.low.CRP | 0.000192 |
| p.high.CRP | 0.901 |
| Gene | low CRP | high CRP |
|---|---|---|
| AKT2 | -8391 | 5504 |
| GATAD2A | -6815 | 5314 |
| PIN1 | -9660 | 3728 |
| AKT1 | -4794 | 6231 |
| KAT6A | -7218 | 3582 |
| PIP4K2A | -8599 | 2837 |
| GATAD2B | -7514 | 2232 |
| HDAC1 | -3835 | 3708 |
| MTA2 | -10115 | 863 |
| BRPF1 | -10119 | 827 |
| CHD4 | -8254 | 587 |
| MBD3 | -247 | 1576 |
| low CRP | high CRP | |
|---|---|---|
| AKT1 | -4794 | 6231 |
| AKT2 | -8391 | 5504 |
| AKT3 | -9616 | -10833 |
| BRD1 | -10170 | -5159 |
| BRD7 | 4663 | -340 |
| BRPF1 | -10119 | 827 |
| BRPF3 | -9358 | -1215 |
| CHD3 | -9446 | -6383 |
| CHD4 | -8254 | 587 |
| EP300 | 4311 | 7552 |
| GATAD2A | -6815 | 5314 |
| GATAD2B | -7514 | 2232 |
| HDAC1 | -3835 | 3708 |
| HDAC2 | 8973 | 3999 |
| ING2 | 5186 | 4738 |
| ING5 | -5547 | -10054 |
| KAT6A | -7218 | 3582 |
| MAP2K6 | 9435 | 9577 |
| MBD3 | -247 | 1576 |
| MEAF6 | -4622 | -5583 |
| MTA2 | -10115 | 863 |
| PIN1 | -9660 | 3728 |
| PIP4K2A | -8599 | 2837 |
| PIP4K2B | -7642 | -3179 |
| PIP4K2C | -10764 | -5694 |
| PML | -6449 | -6720 |
| RBBP4 | 4016 | -1020 |
| RBBP7 | -10846 | -9848 |
| TP53 | -7284 | -8934 |
ERKs are inactivated
| metric | value |
|---|---|
| setSize | 13 |
| pMANOVA | 0.00109 |
| p.adjustMANOVA | 0.00394 |
| s.dist | 0.545 |
| s.low.CRP | 0.121 |
| s.high.CRP | 0.531 |
| p.low.CRP | 0.449 |
| p.high.CRP | 0.000915 |
| Gene | low CRP | high CRP |
|---|---|---|
| DUSP3 | 9937 | 9647 |
| MAPK3 | 8931 | 9626 |
| PPP2CA | 8810 | 8328 |
| PPP2CB | 8482 | 7631 |
| DUSP6 | 7994 | 2589 |
| MAPK1 | 1052 | 9260 |
| PPP2R1B | 2503 | 437 |
| low CRP | high CRP | |
|---|---|---|
| DUSP3 | 9937 | 9647 |
| DUSP4 | -6630 | -4192 |
| DUSP6 | 7994 | 2589 |
| DUSP7 | -4748 | 387 |
| MAPK1 | 1052 | 9260 |
| MAPK3 | 8931 | 9626 |
| MAPK7 | -10125 | 5069 |
| PPP2CA | 8810 | 8328 |
| PPP2CB | 8482 | 7631 |
| PPP2R1A | -3087 | 6994 |
| PPP2R1B | 2503 | 437 |
| PPP2R5D | -6508 | 4985 |
| VRK3 | -7245 | 5798 |
Endosomal/Vacuolar pathway
| metric | value |
|---|---|
| setSize | 12 |
| pMANOVA | 0.0128 |
| p.adjustMANOVA | 0.0311 |
| s.dist | 0.365 |
| s.low.CRP | -0.363 |
| s.high.CRP | 0.0386 |
| p.low.CRP | 0.0295 |
| p.high.CRP | 0.817 |
| Gene | low CRP | high CRP |
|---|---|---|
| CTSL | -5538 | 5895 |
| HLA-E | -10409 | 2003 |
| HLA-C | -2829 | 2125 |
| HLA-H | -8161 | 452 |
| HLA-A | -5067 | 570 |
| HLA-B | -1559 | 1570 |
| HLA-G | -5051 | 159 |
| low CRP | high CRP | |
|---|---|---|
| B2M | -4257 | -4660 |
| CTSL | -5538 | 5895 |
| CTSS | 9854 | 7280 |
| CTSV | -1271 | -2930 |
| HLA-A | -5067 | 570 |
| HLA-B | -1559 | 1570 |
| HLA-C | -2829 | 2125 |
| HLA-E | -10409 | 2003 |
| HLA-F | -10598 | -7440 |
| HLA-G | -5051 | 159 |
| HLA-H | -8161 | 452 |
| LNPEP | -8634 | -6784 |
HIV elongation arrest and recovery
| metric | value |
|---|---|
| setSize | 32 |
| pMANOVA | 2.99e-05 |
| p.adjustMANOVA | 0.000168 |
| s.dist | 0.308 |
| s.low.CRP | -0.115 |
| s.high.CRP | 0.285 |
| p.low.CRP | 0.259 |
| p.high.CRP | 0.00525 |
| Gene | low CRP | high CRP |
|---|---|---|
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| NELFB | -8446 | 5056 |
| POLR2G | -5778 | 6576 |
| NELFE | -4877 | 6342 |
| ELL | -4094 | 6433 |
| POLR2A | -8726 | 2901 |
| GTF2F1 | -3109 | 7342 |
| SUPT4H1 | -3945 | 5159 |
| POLR2F | -2307 | 6746 |
| CCNK | -3547 | 4337 |
| POLR2C | -2183 | 3527 |
| POLR2I | -2123 | 2695 |
| POLR2B | -1034 | 188 |
| low CRP | high CRP | |
|---|---|---|
| CCNK | -3547 | 4337 |
| CCNT1 | -8231 | -6368 |
| CCNT2 | 770 | -5045 |
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| ELL | -4094 | 6433 |
| ELOA | 8918 | 6756 |
| ELOB | 4867 | 8716 |
| ELOC | 6598 | 8484 |
| GTF2F1 | -3109 | 7342 |
| GTF2F2 | 4728 | 6017 |
| NELFA | -2921 | -970 |
| NELFB | -8446 | 5056 |
| NELFCD | -3646 | -4090 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| POLR2B | -1034 | 188 |
| POLR2C | -2183 | 3527 |
| POLR2D | 3401 | -4083 |
| POLR2E | 6766 | 8343 |
| POLR2F | -2307 | 6746 |
| POLR2G | -5778 | 6576 |
| POLR2H | 653 | -2264 |
| POLR2I | -2123 | 2695 |
| POLR2J | 4448 | 7822 |
| POLR2K | 1881 | -1885 |
| POLR2L | 126 | 7246 |
| SSRP1 | -9188 | -7998 |
| SUPT16H | -8035 | -9349 |
| SUPT4H1 | -3945 | 5159 |
| SUPT5H | -7894 | -1035 |
| TCEA1 | 5155 | -1614 |
Pausing and recovery of HIV elongation
| metric | value |
|---|---|
| setSize | 32 |
| pMANOVA | 2.99e-05 |
| p.adjustMANOVA | 0.000168 |
| s.dist | 0.308 |
| s.low.CRP | -0.115 |
| s.high.CRP | 0.285 |
| p.low.CRP | 0.259 |
| p.high.CRP | 0.00525 |
| Gene | low CRP | high CRP |
|---|---|---|
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| NELFB | -8446 | 5056 |
| POLR2G | -5778 | 6576 |
| NELFE | -4877 | 6342 |
| ELL | -4094 | 6433 |
| POLR2A | -8726 | 2901 |
| GTF2F1 | -3109 | 7342 |
| SUPT4H1 | -3945 | 5159 |
| POLR2F | -2307 | 6746 |
| CCNK | -3547 | 4337 |
| POLR2C | -2183 | 3527 |
| POLR2I | -2123 | 2695 |
| POLR2B | -1034 | 188 |
| low CRP | high CRP | |
|---|---|---|
| CCNK | -3547 | 4337 |
| CCNT1 | -8231 | -6368 |
| CCNT2 | 770 | -5045 |
| CDK9 | -10657 | 5444 |
| CTDP1 | -5483 | 8151 |
| ELL | -4094 | 6433 |
| ELOA | 8918 | 6756 |
| ELOB | 4867 | 8716 |
| ELOC | 6598 | 8484 |
| GTF2F1 | -3109 | 7342 |
| GTF2F2 | 4728 | 6017 |
| NELFA | -2921 | -970 |
| NELFB | -8446 | 5056 |
| NELFCD | -3646 | -4090 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| POLR2B | -1034 | 188 |
| POLR2C | -2183 | 3527 |
| POLR2D | 3401 | -4083 |
| POLR2E | 6766 | 8343 |
| POLR2F | -2307 | 6746 |
| POLR2G | -5778 | 6576 |
| POLR2H | 653 | -2264 |
| POLR2I | -2123 | 2695 |
| POLR2J | 4448 | 7822 |
| POLR2K | 1881 | -1885 |
| POLR2L | 126 | 7246 |
| SSRP1 | -9188 | -7998 |
| SUPT16H | -8035 | -9349 |
| SUPT4H1 | -3945 | 5159 |
| SUPT5H | -7894 | -1035 |
| TCEA1 | 5155 | -1614 |
Role of phospholipids in phagocytosis
| metric | value |
|---|---|
| setSize | 87 |
| pMANOVA | 3.18e-12 |
| p.adjustMANOVA | 9.22e-11 |
| s.dist | 0.29 |
| s.low.CRP | 0.135 |
| s.high.CRP | -0.257 |
| p.low.CRP | 0.0301 |
| p.high.CRP | 3.51e-05 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| IGKV4-1 | 2812 | -4988 |
| low CRP | high CRP | |
|---|---|---|
| AHCYL1 | 6114 | 7566 |
| CD247 | -11271 | -10327 |
| CD3G | -9054 | -10504 |
| FCGR1A | 9965 | 9575 |
| FCGR2A | 9414 | 9249 |
| FCGR3A | -11272 | -4672 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| ITPR1 | -5546 | -5368 |
| ITPR2 | 6833 | 6418 |
| ITPR3 | -8438 | -9066 |
| PIK3CA | 6889 | 4182 |
| PIK3CB | 9838 | 9248 |
| PIK3R1 | -7197 | -8942 |
| PIK3R2 | 2459 | 5820 |
| PLA2G6 | -10753 | -10993 |
| PLCG1 | -6360 | -11043 |
| PLCG2 | -4618 | 6826 |
| PLD1 | 9826 | 9945 |
| PLD2 | 7087 | 7779 |
| PLD3 | 8640 | 7098 |
| PLD4 | -11266 | -11216 |
| PLPP5 | -4861 | -6194 |
| PRKCD | 9393 | 9642 |
| PRKCE | -10383 | -2720 |
| SYK | 9464 | 9848 |
WNT5A-dependent internalization of FZD4
| metric | value |
|---|---|
| setSize | 13 |
| pMANOVA | 0.000968 |
| p.adjustMANOVA | 0.00358 |
| s.dist | 0.578 |
| s.low.CRP | 0.165 |
| s.high.CRP | 0.554 |
| p.low.CRP | 0.302 |
| p.high.CRP | 0.000546 |
| Gene | low CRP | high CRP |
|---|---|---|
| CLTC | 9376 | 9720 |
| CLTA | 8416 | 8998 |
| ARRB2 | 7827 | 9274 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| PRKCB | 5395 | 8378 |
| AP2A2 | 3196 | 9217 |
| PRKCA | 2473 | 1229 |
| low CRP | high CRP | |
|---|---|---|
| AP2A1 | -3194 | 9104 |
| AP2A2 | 3196 | 9217 |
| AP2B1 | -9145 | 2444 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| ARRB2 | 7827 | 9274 |
| CLTA | 8416 | 8998 |
| CLTB | -2857 | 8274 |
| CLTC | 9376 | 9720 |
| DVL2 | -10305 | -7147 |
| FZD4 | -10858 | -7985 |
| PRKCA | 2473 | 1229 |
| PRKCB | 5395 | 8378 |
Regulation of Complement cascade
| metric | value |
|---|---|
| setSize | 93 |
| pMANOVA | 1.56e-12 |
| p.adjustMANOVA | 4.61e-11 |
| s.dist | 0.274 |
| s.low.CRP | 0.203 |
| s.high.CRP | -0.185 |
| p.low.CRP | 0.00071 |
| p.high.CRP | 0.00209 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| C4BPB | 3624 | -4862 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| low CRP | high CRP | |
|---|---|---|
| C1QA | -49 | 7890 |
| C1QB | 6746 | 8930 |
| C1QC | 7805 | 9340 |
| C1R | -10393 | -4020 |
| C1S | -6159 | 552 |
| C2 | 6634 | 2959 |
| C3 | -11179 | -10489 |
| C3AR1 | 8924 | 8181 |
| C4A | 5060 | 4740 |
| C4B | 6359 | 2884 |
| C4BPB | 3624 | -4862 |
| C5 | 7727 | 2354 |
| C5AR1 | 9359 | 9709 |
| C5AR2 | 8198 | 8666 |
| C8G | -10839 | -8035 |
| CD19 | -2992 | -2929 |
| CD46 | 8744 | 5145 |
| CD55 | 9326 | 9842 |
| CD59 | 4075 | 5772 |
| CD81 | -10685 | -3573 |
| CFB | -3014 | -2968 |
| CFH | -3147 | -6338 |
| CLU | 9512 | 10102 |
| CPN2 | 8266 | 1159 |
| CR1 | 10079 | 10078 |
| CR2 | -1342 | -3900 |
| ELANE | 9880 | 4888 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| PROS1 | 9065 | 7937 |
| SERPING1 | -6329 | -10968 |
| VTN | -5291 | 730 |
Complement cascade
| metric | value |
|---|---|
| setSize | 97 |
| pMANOVA | 1.56e-12 |
| p.adjustMANOVA | 4.61e-11 |
| s.dist | 0.269 |
| s.low.CRP | 0.201 |
| s.high.CRP | -0.179 |
| p.low.CRP | 0.000633 |
| p.high.CRP | 0.00233 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| C4BPB | 3624 | -4862 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| low CRP | high CRP | |
|---|---|---|
| C1QA | -49 | 7890 |
| C1QB | 6746 | 8930 |
| C1QC | 7805 | 9340 |
| C1R | -10393 | -4020 |
| C1S | -6159 | 552 |
| C2 | 6634 | 2959 |
| C3 | -11179 | -10489 |
| C3AR1 | 8924 | 8181 |
| C4A | 5060 | 4740 |
| C4B | 6359 | 2884 |
| C4BPB | 3624 | -4862 |
| C5 | 7727 | 2354 |
| C5AR1 | 9359 | 9709 |
| C5AR2 | 8198 | 8666 |
| C8G | -10839 | -8035 |
| CD19 | -2992 | -2929 |
| CD46 | 8744 | 5145 |
| CD55 | 9326 | 9842 |
| CD59 | 4075 | 5772 |
| CD81 | -10685 | -3573 |
| CFB | -3014 | -2968 |
| CFD | 2998 | 2390 |
| CFH | -3147 | -6338 |
| CLU | 9512 | 10102 |
| CPN2 | 8266 | 1159 |
| CR1 | 10079 | 10078 |
| CR2 | -1342 | -3900 |
| ELANE | 9880 | 4888 |
| FCN1 | 9889 | 9103 |
| GZMM | -11118 | -8768 |
| IGHG1 | -1124 | -7111 |
| IGHG2 | -5587 | -6004 |
| IGHG3 | -507 | -4089 |
| IGHG4 | -4038 | -5940 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| MASP2 | 2089 | -6883 |
| PROS1 | 9065 | 7937 |
| SERPING1 | -6329 | -10968 |
| VTN | -5291 | 730 |
HDMs demethylate histones
| metric | value |
|---|---|
| setSize | 22 |
| pMANOVA | 0.00145 |
| p.adjustMANOVA | 0.00503 |
| s.dist | 0.325 |
| s.low.CRP | -0.0444 |
| s.high.CRP | 0.322 |
| p.low.CRP | 0.719 |
| p.high.CRP | 0.00896 |
| Gene | low CRP | high CRP |
|---|---|---|
| KDM5C | -4837 | 6795 |
| PHF8 | -6137 | 4275 |
| KDM4A | -5855 | 4280 |
| KDM6A | -3419 | 5092 |
| KDM2A | -2499 | 5906 |
| KDM5B | -1367 | 7624 |
| KDM5A | -6036 | 1492 |
| low CRP | high CRP | |
|---|---|---|
| ARID5B | 802.0 | 34.0 |
| H3C15 | 5262.5 | 7402.5 |
| JMJD6 | 4660.0 | 7122.0 |
| KDM1A | -6245.0 | -6064.0 |
| KDM1B | 6297.0 | 4922.0 |
| KDM2A | -2499.0 | 5906.0 |
| KDM2B | -10632.0 | -8855.0 |
| KDM3A | -9927.0 | -11194.0 |
| KDM3B | 6054.0 | 9282.0 |
| KDM4A | -5855.0 | 4280.0 |
| KDM4B | 6479.0 | 8890.0 |
| KDM4C | -9638.0 | -6288.0 |
| KDM5A | -6036.0 | 1492.0 |
| KDM5B | -1367.0 | 7624.0 |
| KDM5C | -4837.0 | 6795.0 |
| KDM5D | -3677.0 | -114.0 |
| KDM6A | -3419.0 | 5092.0 |
| KDM6B | 9279.0 | 8987.0 |
| KDM7A | 8052.0 | 6799.0 |
| PHF2 | 2150.0 | 7499.0 |
| PHF8 | -6137.0 | 4275.0 |
| UTY | -1906.0 | -493.0 |
SUMOylation of immune response proteins
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.00714 |
| p.adjustMANOVA | 0.0194 |
| s.dist | 0.522 |
| s.low.CRP | 0.139 |
| s.high.CRP | 0.503 |
| p.low.CRP | 0.425 |
| p.high.CRP | 0.00388 |
| Gene | low CRP | high CRP |
|---|---|---|
| SUMO1 | 7968 | 6798 |
| SUMO3 | 6805 | 7483 |
| NFKBIA | 6855 | 7374 |
| TOPORS | 4682 | 2877 |
| IKBKE | 387 | 6793 |
| low CRP | high CRP | |
|---|---|---|
| IKBKE | 387 | 6793 |
| IKBKG | -3058 | 7903 |
| NFKB2 | 3069 | -1167 |
| NFKBIA | 6855 | 7374 |
| PIAS3 | -3766 | 1150 |
| PIAS4 | -1432 | 8309 |
| RELA | -7305 | 2739 |
| SUMO1 | 7968 | 6798 |
| SUMO3 | 6805 | 7483 |
| TOPORS | 4682 | 2877 |
| UBE2I | -4201 | 2754 |
Abortive elongation of HIV-1 transcript in the absence of Tat
| metric | value |
|---|---|
| setSize | 23 |
| pMANOVA | 0.00222 |
| p.adjustMANOVA | 0.0071 |
| s.dist | 0.284 |
| s.low.CRP | -0.0883 |
| s.high.CRP | 0.27 |
| p.low.CRP | 0.464 |
| p.high.CRP | 0.0248 |
| Gene | low CRP | high CRP |
|---|---|---|
| CTDP1 | -5483 | 8151 |
| NELFB | -8446 | 5056 |
| POLR2G | -5778 | 6576 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| GTF2F1 | -3109 | 7342 |
| SUPT4H1 | -3945 | 5159 |
| POLR2F | -2307 | 6746 |
| POLR2C | -2183 | 3527 |
| POLR2I | -2123 | 2695 |
| POLR2B | -1034 | 188 |
| low CRP | high CRP | |
|---|---|---|
| CTDP1 | -5483 | 8151 |
| GTF2F1 | -3109 | 7342 |
| GTF2F2 | 4728 | 6017 |
| NCBP1 | 1766 | -6055 |
| NCBP2 | 3719 | -10143 |
| NELFA | -2921 | -970 |
| NELFB | -8446 | 5056 |
| NELFCD | -3646 | -4090 |
| NELFE | -4877 | 6342 |
| POLR2A | -8726 | 2901 |
| POLR2B | -1034 | 188 |
| POLR2C | -2183 | 3527 |
| POLR2D | 3401 | -4083 |
| POLR2E | 6766 | 8343 |
| POLR2F | -2307 | 6746 |
| POLR2G | -5778 | 6576 |
| POLR2H | 653 | -2264 |
| POLR2I | -2123 | 2695 |
| POLR2J | 4448 | 7822 |
| POLR2K | 1881 | -1885 |
| POLR2L | 126 | 7246 |
| SUPT4H1 | -3945 | 5159 |
| SUPT5H | -7894 | -1035 |
Retrograde neurotrophin signalling
| metric | value |
|---|---|
| setSize | 12 |
| pMANOVA | 0.000584 |
| p.adjustMANOVA | 0.00231 |
| s.dist | 0.682 |
| s.low.CRP | 0.269 |
| s.high.CRP | 0.626 |
| p.low.CRP | 0.106 |
| p.high.CRP | 0.000173 |
| Gene | low CRP | high CRP |
|---|---|---|
| CLTC | 9376 | 9720 |
| CLTA | 8416 | 8998 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| DNM3 | 7927 | 7198 |
| AP2A2 | 3196 | 9217 |
| DNM1 | 6883 | 3239 |
| low CRP | high CRP | |
|---|---|---|
| AP2A1 | -3194 | 9104 |
| AP2A2 | 3196 | 9217 |
| AP2B1 | -9145 | 2444 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| CLTA | 8416 | 8998 |
| CLTC | 9376 | 9720 |
| DNAL4 | -697 | 5475 |
| DNM1 | 6883 | 3239 |
| DNM2 | -6816 | 8202 |
| DNM3 | 7927 | 7198 |
| NTRK1 | -3499 | -8157 |
FCERI mediated Ca+2 mobilization
| metric | value |
|---|---|
| setSize | 88 |
| pMANOVA | 2.55e-10 |
| p.adjustMANOVA | 5.18e-09 |
| s.dist | 0.26 |
| s.low.CRP | 0.136 |
| s.high.CRP | -0.221 |
| p.low.CRP | 0.0278 |
| p.high.CRP | 0.000334 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| SOS1 | 3534 | -7412 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| low CRP | high CRP | |
|---|---|---|
| AHCYL1 | 6114 | 7566 |
| BTK | 7623 | 7870 |
| CALM1 | -6645 | 1321 |
| GRAP2 | 5425 | 4991 |
| GRB2 | 9631 | 9985 |
| IGHE | -498 | -5753 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| ITK | -7038 | -10924 |
| ITPR1 | -5546 | -5368 |
| ITPR2 | 6833 | 6418 |
| ITPR3 | -8438 | -9066 |
| LAT | -9843 | -10628 |
| LCP2 | -2426 | 872 |
| LYN | 7575 | 8379 |
| NFATC1 | -9648 | -4795 |
| NFATC2 | -11185 | -10445 |
| NFATC3 | -10822 | -10053 |
| PLCG1 | -6360 | -11043 |
| PLCG2 | -4618 | 6826 |
| PPP3CA | 6208 | 7300 |
| PPP3CB | 8057 | 6833 |
| PPP3R1 | 8998 | 8570 |
| SHC1 | -3416 | 5815 |
| SOS1 | 3534 | -7412 |
| SYK | 9464 | 9848 |
| TEC | 8165 | 7953 |
| TXK | -9905 | -10778 |
| VAV1 | 5553 | 8731 |
| VAV2 | -5033 | -1339 |
| VAV3 | -6160 | 7203 |
FCERI mediated MAPK activation
| metric | value |
|---|---|
| setSize | 89 |
| pMANOVA | 2.7e-10 |
| p.adjustMANOVA | 5.39e-09 |
| s.dist | 0.258 |
| s.low.CRP | 0.221 |
| s.high.CRP | -0.133 |
| p.low.CRP | 0.000306 |
| p.high.CRP | 0.0302 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGLV5-45 | 4194 | -7364 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| SOS1 | 3534 | -7412 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGLV1-36 | 3522 | -5030 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| low CRP | high CRP | |
|---|---|---|
| FOS | 6663 | 6569 |
| GRAP2 | 5425 | 4991 |
| GRB2 | 9631 | 9985 |
| HRAS | -2248 | -1932 |
| IGHE | -498 | -5753 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-36 | 3522 | -5030 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV10-54 | -5422 | 316 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-18 | 2015 | -2963 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-12 | -7299 | -6816 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV4-69 | 1344 | -2261 |
| IGLV5-45 | 4194 | -7364 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| IGLV7-46 | 2445 | -3619 |
| IGLV8-61 | -3989 | -5208 |
| JUN | 2838 | 4810 |
| KRAS | 3789 | 4070 |
| LAT | -9843 | -10628 |
| LCP2 | -2426 | 872 |
| LYN | 7575 | 8379 |
| MAP2K4 | 6895 | 7431 |
| MAP2K7 | -2754 | 4813 |
| MAP3K1 | 5466 | 5938 |
| MAPK1 | 1052 | 9260 |
| MAPK10 | 6734 | 3872 |
| MAPK3 | 8931 | 9626 |
| MAPK8 | -1061 | -9914 |
| MAPK9 | -6530 | -1870 |
| NRAS | 7321 | 4878 |
| PAK1 | 9711 | 7682 |
| PAK2 | 9019 | 8433 |
| PLCG1 | -6360 | -11043 |
| PLCG2 | -4618 | 6826 |
| RAC1 | 9052 | 9614 |
| SHC1 | -3416 | 5815 |
| SOS1 | 3534 | -7412 |
| SYK | 9464 | 9848 |
| VAV1 | 5553 | 8731 |
| VAV2 | -5033 | -1339 |
| VAV3 | -6160 | 7203 |
WNT5A-dependent internalization of FZD2, FZD5 and ROR2
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.000102 |
| p.adjustMANOVA | 0.000496 |
| s.dist | 0.841 |
| s.low.CRP | 0.395 |
| s.high.CRP | 0.742 |
| p.low.CRP | 0.0232 |
| p.high.CRP | 2.01e-05 |
| Gene | low CRP | high CRP |
|---|---|---|
| FZD5 | 10104 | 10128 |
| CLTC | 9376 | 9720 |
| CLTA | 8416 | 8998 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| FZD2 | 6675 | 7410 |
| AP2A2 | 3196 | 9217 |
| low CRP | high CRP | |
|---|---|---|
| AP2A1 | -3194 | 9104 |
| AP2A2 | 3196 | 9217 |
| AP2B1 | -9145 | 2444 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| CLTA | 8416 | 8998 |
| CLTB | -2857 | 8274 |
| CLTC | 9376 | 9720 |
| FZD2 | 6675 | 7410 |
| FZD5 | 10104 | 10128 |
| ROR1 | 2411 | -2323 |
GPVI-mediated activation cascade
| metric | value |
|---|---|
| setSize | 31 |
| pMANOVA | 3.29e-05 |
| p.adjustMANOVA | 0.000179 |
| s.dist | 0.412 |
| s.low.CRP | 0.0632 |
| s.high.CRP | 0.407 |
| p.low.CRP | 0.542 |
| p.high.CRP | 8.7e-05 |
| Gene | low CRP | high CRP |
|---|---|---|
| SYK | 9464 | 9848 |
| PIK3CB | 9838 | 9248 |
| RAC1 | 9052 | 9614 |
| CLEC1B | 9832 | 8778 |
| RHOA | 8351 | 8888 |
| RHOG | 7549 | 9255 |
| CDC42 | 8498 | 7640 |
| LYN | 7575 | 8379 |
| FCER1G | 6595 | 9147 |
| PIK3R6 | 8267 | 7206 |
| GP6 | 7137 | 7699 |
| VAV1 | 5553 | 8731 |
| PTPN11 | 4691 | 6614 |
| PIK3CA | 6889 | 4182 |
| PDPK1 | 2392 | 7816 |
| PIK3R2 | 2459 | 5820 |
| low CRP | high CRP | |
|---|---|---|
| CDC42 | 8498 | 7640 |
| CLEC1B | 9832 | 8778 |
| FCER1G | 6595 | 9147 |
| FYN | -10878 | -6729 |
| GP6 | 7137 | 7699 |
| LAT | -9843 | -10628 |
| LCK | -10358 | -10719 |
| LCP2 | -2426 | 872 |
| LYN | 7575 | 8379 |
| PDPK1 | 2392 | 7816 |
| PIK3CA | 6889 | 4182 |
| PIK3CB | 9838 | 9248 |
| PIK3CG | -9742 | 5545 |
| PIK3R1 | -7197 | -8942 |
| PIK3R2 | 2459 | 5820 |
| PIK3R3 | -11107 | -8159 |
| PIK3R5 | -9700 | 3911 |
| PIK3R6 | 8267 | 7206 |
| PLCG2 | -4618 | 6826 |
| PRKCZ | -10855 | -7708 |
| PTPN11 | 4691 | 6614 |
| PTPN6 | -691 | 7862 |
| RAC1 | 9052 | 9614 |
| RAC2 | -7677 | 6828 |
| RHOA | 8351 | 8888 |
| RHOB | -4807 | 3859 |
| RHOG | 7549 | 9255 |
| SYK | 9464 | 9848 |
| VAV1 | 5553 | 8731 |
| VAV2 | -5033 | -1339 |
| VAV3 | -6160 | 7203 |
Synthesis of Leukotrienes (LT) and Eoxins (EX)
| metric | value |
|---|---|
| setSize | 15 |
| pMANOVA | 0.0158 |
| p.adjustMANOVA | 0.0365 |
| s.dist | 0.338 |
| s.low.CRP | -0.000913 |
| s.high.CRP | 0.338 |
| p.low.CRP | 0.995 |
| p.high.CRP | 0.0234 |
| Gene | low CRP | high CRP |
|---|---|---|
| MAPKAPK2 | -10572 | 6892 |
| LTC4S | -7039 | 2930 |
| GGT5 | -6888 | 1713 |
| CYP4F8 | -3981 | 186 |
| low CRP | high CRP | |
|---|---|---|
| ABCC1 | 686 | 2817 |
| ALOX15 | -6345 | -9981 |
| ALOX5 | 9516 | 9496 |
| ALOX5AP | 4064 | 8312 |
| CYP4F22 | -11214 | -10272 |
| CYP4F3 | 5306 | 6371 |
| CYP4F8 | -3981 | 186 |
| DPEP2 | -4986 | -926 |
| DPEP3 | -4594 | -1297 |
| GGT1 | 8068 | 10073 |
| GGT5 | -6888 | 1713 |
| LTA4H | 9933 | 9541 |
| LTC4S | -7039 | 2930 |
| MAPKAPK2 | -10572 | 6892 |
| PTGR1 | 9237 | 9969 |
AKT phosphorylates targets in the cytosol
| metric | value |
|---|---|
| setSize | 14 |
| pMANOVA | 0.00216 |
| p.adjustMANOVA | 0.00702 |
| s.dist | 0.541 |
| s.low.CRP | 0.176 |
| s.high.CRP | 0.511 |
| p.low.CRP | 0.254 |
| p.high.CRP | 0.000921 |
| Gene | low CRP | high CRP |
|---|---|---|
| MKRN1 | 9789 | 8565 |
| CHUK | 9198 | 7663 |
| AKT1S1 | 8045 | 8241 |
| CASP9 | 5303 | 9133 |
| GSK3B | 6119 | 7526 |
| GSK3A | 5279 | 8683 |
| MDM2 | 7204 | 3892 |
| CDKN1A | 3621 | 5190 |
| BAD | 1009 | 8765 |
| low CRP | high CRP | |
|---|---|---|
| AKT1 | -4794 | 6231 |
| AKT1S1 | 8045 | 8241 |
| AKT2 | -8391 | 5504 |
| AKT3 | -9616 | -10833 |
| BAD | 1009 | 8765 |
| CASP9 | 5303 | 9133 |
| CDKN1A | 3621 | 5190 |
| CDKN1B | -9926 | -2672 |
| CHUK | 9198 | 7663 |
| GSK3A | 5279 | 8683 |
| GSK3B | 6119 | 7526 |
| MDM2 | 7204 | 3892 |
| MKRN1 | 9789 | 8565 |
| TSC2 | -4535 | 2859 |
RHO GTPases activate CIT
| metric | value |
|---|---|
| setSize | 18 |
| pMANOVA | 0.00161 |
| p.adjustMANOVA | 0.00548 |
| s.dist | 0.455 |
| s.low.CRP | 0.109 |
| s.high.CRP | 0.442 |
| p.low.CRP | 0.424 |
| p.high.CRP | 0.00116 |
| Gene | low CRP | high CRP |
|---|---|---|
| DLG4 | 9905 | 8876 |
| RAC1 | 9052 | 9614 |
| MYL9 | 9640 | 7741 |
| RHOA | 8351 | 8888 |
| MYL6 | 6786 | 9643 |
| PPP1CB | 8657 | 6666 |
| PPP1R12A | 5601 | 6368 |
| MYH9 | 1879 | 8348 |
| KIF14 | 1714 | 3512 |
| low CRP | high CRP | |
|---|---|---|
| CDKN1B | -9926 | -2672 |
| CIT | -7580 | -2898 |
| DLG4 | 9905 | 8876 |
| KIF14 | 1714 | 3512 |
| MYH10 | -7101 | 3044 |
| MYH11 | 1903 | -4778 |
| MYH9 | 1879 | 8348 |
| MYL12B | -2612 | 6816 |
| MYL6 | 6786 | 9643 |
| MYL9 | 9640 | 7741 |
| PPP1CB | 8657 | 6666 |
| PPP1R12A | 5601 | 6368 |
| PPP1R12B | -4326 | 4036 |
| PRC1 | -5431 | 2601 |
| RAC1 | 9052 | 9614 |
| RHOA | 8351 | 8888 |
| RHOB | -4807 | 3859 |
| RHOC | -11158 | -4627 |
Suppression of phagosomal maturation
| metric | value |
|---|---|
| setSize | 12 |
| pMANOVA | 0.00724 |
| p.adjustMANOVA | 0.0195 |
| s.dist | 0.517 |
| s.low.CRP | 0.161 |
| s.high.CRP | 0.492 |
| p.low.CRP | 0.335 |
| p.high.CRP | 0.00319 |
| Gene | low CRP | high CRP |
|---|---|---|
| RAB7A | 8897 | 9367 |
| ATP6V1H | 7942 | 8571 |
| RAB5A | 8478 | 6815 |
| UBB | 8251 | 6157 |
| KPNA1 | 4214 | 1618 |
| low CRP | high CRP | |
|---|---|---|
| ATP6V1H | 7942 | 8571 |
| CORO1A | -5520 | 7058 |
| HGS | -381 | 6840 |
| KPNA1 | 4214 | 1618 |
| KPNB1 | -1223 | 3575 |
| RAB5A | 8478 | 6815 |
| RAB7A | 8897 | 9367 |
| RPS27A | -3555 | -7070 |
| UBA52 | -1875 | 3023 |
| UBB | 8251 | 6157 |
| UBC | -1915 | 5825 |
| VPS33B | -9608 | 4599 |
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
| metric | value |
|---|---|
| setSize | 83 |
| pMANOVA | 2.23e-08 |
| p.adjustMANOVA | 3.13e-07 |
| s.dist | 0.237 |
| s.low.CRP | 0.134 |
| s.high.CRP | -0.196 |
| p.low.CRP | 0.0354 |
| p.high.CRP | 0.00207 |
| Gene | low CRP | high CRP |
|---|---|---|
| IGKV3-11 | 5548 | -7167 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-5 | 6127 | -5162 |
| IGHV3-23 | 6032 | -5092 |
| IGKV2-30 | 5205 | -5349 |
| IGLV1-44 | 4742 | -5791 |
| IGHV4-59 | 4532 | -5870 |
| SOS1 | 3534 | -7412 |
| IGLV2-8 | 4818 | -5256 |
| IGHV4-39 | 3786 | -6542 |
| IGLV3-19 | 4006 | -5611 |
| IGHV1-2 | 5956 | -3146 |
| IGKV3-20 | 3704 | -5021 |
| IGKC | 2773 | -6437 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-7 | 4185 | -3630 |
| IGKV3-15 | 3174 | -4687 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| low CRP | high CRP | |
|---|---|---|
| AHCYL1 | 6114 | 7566 |
| BLK | -5294 | -3774 |
| BLNK | -5690 | -5869 |
| BTK | 7623 | 7870 |
| CALM1 | -6645 | 1321 |
| CD19 | -2992 | -2929 |
| CD22 | -3032 | -4243 |
| CD79A | -3264 | -4267 |
| CD79B | -6240 | -6157 |
| DAPP1 | 9222 | 3322 |
| FYN | -10878 | -6729 |
| GRB2 | 9631 | 9985 |
| IGHD | -2028 | -4193 |
| IGHM | 1890 | -2470 |
| IGHV1-2 | 5956 | -3146 |
| IGHV1-46 | 3766 | -2976 |
| IGHV1-69 | 2354 | -2328 |
| IGHV2-5 | 4451 | -1972 |
| IGHV2-70 | -3315 | -2159 |
| IGHV3-11 | 3518 | -4591 |
| IGHV3-13 | 799 | -2451 |
| IGHV3-23 | 6032 | -5092 |
| IGHV3-30 | 2500 | -5193 |
| IGHV3-33 | 98 | -4138 |
| IGHV3-48 | 3183 | -4340 |
| IGHV3-53 | 3131 | -1786 |
| IGHV3-7 | 4185 | -3630 |
| IGHV4-34 | 1144 | -4007 |
| IGHV4-39 | 3786 | -6542 |
| IGHV4-59 | 4532 | -5870 |
| IGKC | 2773 | -6437 |
| IGKV1-12 | 725 | -6674 |
| IGKV1-16 | 6217 | -5451 |
| IGKV1-17 | -241 | -2794 |
| IGKV1-33 | 5955 | -6384 |
| IGKV1-5 | 6127 | -5162 |
| IGKV1D-39 | 5018 | -2677 |
| IGKV2-28 | 1440 | -6662 |
| IGKV2-30 | 5205 | -5349 |
| IGKV2D-28 | -7224 | -2947 |
| IGKV3-11 | 5548 | -7167 |
| IGKV3-15 | 3174 | -4687 |
| IGKV3-20 | 3704 | -5021 |
| IGKV3D-20 | -1830 | -4618 |
| IGKV4-1 | 2812 | -4988 |
| IGKV5-2 | 5226 | -2682 |
| IGLC1 | -2813 | -6176 |
| IGLC2 | -258 | -6539 |
| IGLC3 | -2958 | -4378 |
| IGLC7 | -3403 | -4490 |
| IGLV1-40 | 163 | -5497 |
| IGLV1-44 | 4742 | -5791 |
| IGLV1-47 | 231 | -6633 |
| IGLV1-51 | 1708 | -6601 |
| IGLV2-11 | 870 | -3205 |
| IGLV2-14 | -5127 | -8197 |
| IGLV2-23 | 2029 | -4201 |
| IGLV2-8 | 4818 | -5256 |
| IGLV3-1 | -96 | -5140 |
| IGLV3-19 | 4006 | -5611 |
| IGLV3-21 | -975 | -6062 |
| IGLV3-25 | -942 | -5485 |
| IGLV3-27 | -5365 | -4834 |
| IGLV6-57 | 1834 | -5837 |
| IGLV7-43 | 4854 | -2823 |
| ITPR1 | -5546 | -5368 |
| ITPR2 | 6833 | 6418 |
| ITPR3 | -8438 | -9066 |
| LYN | 7575 | 8379 |
| NCK1 | -9250 | -9113 |
| ORAI1 | -9219 | -1368 |
| ORAI2 | 775 | 6855 |
| PIK3AP1 | 6149 | 8581 |
| PIK3CD | 82 | 7288 |
| PIK3R1 | -7197 | -8942 |
| PLCG2 | -4618 | 6826 |
| PTPN6 | -691 | 7862 |
| SH3KBP1 | 4345 | 7311 |
| SOS1 | 3534 | -7412 |
| STIM1 | -9148 | 7796 |
| SYK | 9464 | 9848 |
| TRPC1 | -2448 | -10832 |
| VAV1 | 5553 | 8731 |
Trafficking of GluR2-containing AMPA receptors
| metric | value |
|---|---|
| setSize | 12 |
| pMANOVA | 0.00483 |
| p.adjustMANOVA | 0.0139 |
| s.dist | 0.554 |
| s.low.CRP | 0.191 |
| s.high.CRP | 0.519 |
| p.low.CRP | 0.252 |
| p.high.CRP | 0.00183 |
| Gene | low CRP | high CRP |
|---|---|---|
| NSF | 8895 | 9680 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| TSPAN7 | 7804 | 6540 |
| PRKCB | 5395 | 8378 |
| AP2A2 | 3196 | 9217 |
| PRKCA | 2473 | 1229 |
| low CRP | high CRP | |
|---|---|---|
| AP2A1 | -3194 | 9104 |
| AP2A2 | 3196 | 9217 |
| AP2B1 | -9145 | 2444 |
| AP2M1 | 7742 | 9334 |
| AP2S1 | 7422 | 8877 |
| GRIA4 | -998 | 602 |
| GRIP1 | -4378 | -11086 |
| NSF | 8895 | 9680 |
| PICK1 | -7615 | 5643 |
| PRKCA | 2473 | 1229 |
| PRKCB | 5395 | 8378 |
| TSPAN7 | 7804 | 6540 |
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
| metric | value |
|---|---|
| setSize | 16 |
| pMANOVA | 0.0106 |
| p.adjustMANOVA | 0.0269 |
| s.dist | 0.367 |
| s.low.CRP | 0.038 |
| s.high.CRP | 0.365 |
| p.low.CRP | 0.793 |
| p.high.CRP | 0.0114 |
| Gene | low CRP | high CRP |
|---|---|---|
| FKBP1A | 9920 | 8990 |
| F11R | 8751 | 8489 |
| RHOA | 8351 | 8888 |
| PARD3 | 7352 | 7983 |
| UBB | 8251 | 6157 |
| CGN | 7428 | 1125 |
| low CRP | high CRP | |
|---|---|---|
| ARHGEF18 | -8526 | -2076 |
| CGN | 7428 | 1125 |
| F11R | 8751 | 8489 |
| FKBP1A | 9920 | 8990 |
| PARD3 | 7352 | 7983 |
| PARD6A | -1188 | 1317 |
| PRKCZ | -10855 | -7708 |
| RHOA | 8351 | 8888 |
| RPS27A | -3555 | -7070 |
| SMURF1 | -9318 | 2452 |
| TGFB1 | -2566 | 6745 |
| TGFBR1 | -7960 | 3224 |
| TGFBR2 | -5037 | 6173 |
| UBA52 | -1875 | 3023 |
| UBB | 8251 | 6157 |
| UBC | -1915 | 5825 |
rRNA processing in the mitochondrion
| metric | value |
|---|---|
| setSize | 29 |
| pMANOVA | 0.000507 |
| p.adjustMANOVA | 0.00203 |
| s.dist | 0.336 |
| s.low.CRP | -0.336 |
| s.high.CRP | -0.0104 |
| p.low.CRP | 0.00175 |
| p.high.CRP | 0.922 |
| Gene | low CRP | high CRP |
|---|---|---|
| TFB1M | -8567 | -10206 |
| MTERF4 | -7847 | -10347 |
| MRM1 | -7443 | -9320 |
| ELAC2 | -10756 | -5453 |
| MT-TL2 | -9294 | -2861 |
| MRM3 | -6571 | -3775 |
| MT-ND2 | -6369 | -3767 |
| NSUN4 | -3781 | -2571 |
| MT-ND1 | -3881 | -1394 |
| MT-ND3 | -4723 | -1060 |
| MT-CYB | -2748 | -78 |
| low CRP | high CRP | |
|---|---|---|
| ELAC2 | -10756 | -5453 |
| HSD17B10 | -1197 | 6037 |
| MRM1 | -7443 | -9320 |
| MRM2 | 5250 | 1415 |
| MRM3 | -6571 | -3775 |
| MT-ATP6 | -6161 | 1833 |
| MT-ATP8 | -8699 | 3719 |
| MT-CO1 | 575 | 1906 |
| MT-CO2 | -1994 | 1965 |
| MT-CO3 | -1724 | 2140 |
| MT-CYB | -2748 | -78 |
| MT-ND1 | -3881 | -1394 |
| MT-ND2 | -6369 | -3767 |
| MT-ND3 | -4723 | -1060 |
| MT-ND4 | 1457 | 1379 |
| MT-ND4L | -6001 | 1900 |
| MT-ND5 | -3288 | 283 |
| MT-RNR1 | -1023 | 1206 |
| MT-RNR2 | -373 | 3642 |
| MT-TF | -8605 | 1267 |
| MT-TL1 | -8729 | 1284 |
| MT-TL2 | -9294 | -2861 |
| MT-TM | -9490 | 3091 |
| MT-TV | -9270 | 940 |
| MTERF4 | -7847 | -10347 |
| NSUN4 | -3781 | -2571 |
| PRORP | 5623 | 3349 |
| TFB1M | -8567 | -10206 |
| TRMT10C | 4825 | -5987 |
Sealing of the nuclear envelope (NE) by ESCRT-III
| metric | value |
|---|---|
| setSize | 25 |
| pMANOVA | 3.17e-05 |
| p.adjustMANOVA | 0.000176 |
| s.dist | 0.528 |
| s.low.CRP | 0.175 |
| s.high.CRP | 0.498 |
| p.low.CRP | 0.131 |
| p.high.CRP | 1.6e-05 |
| Gene | low CRP | high CRP |
|---|---|---|
| CHMP4B | 8338 | 9679 |
| CHMP2A | 8348 | 9510 |
| CHMP3 | 8980 | 8782 |
| TUBB2A | 8108 | 9349 |
| TUBA8 | 8044 | 7112 |
| SPAST | 8135 | 6987 |
| TUBA1C | 7082 | 7744 |
| TUBB4B | 6246 | 7789 |
| TUBA1A | 6178 | 7845 |
| CHMP2B | 7436 | 5296 |
| TUBB1 | 6239 | 6225 |
| TUBB6 | 1680 | 7491 |
| TUBA1B | 1572 | 6394 |
| TUBA4A | 652 | 7677 |
| IST1 | 260 | 7296 |
| low CRP | high CRP | |
|---|---|---|
| CC2D1B | -10559 | -1584 |
| CHMP2A | 8348 | 9510 |
| CHMP2B | 7436 | 5296 |
| CHMP3 | 8980 | 8782 |
| CHMP4A | -1130 | 4862 |
| CHMP4B | 8338 | 9679 |
| CHMP6 | -6653 | 8292 |
| CHMP7 | -4593 | -8038 |
| IST1 | 260 | 7296 |
| LEMD2 | -9649 | 6162 |
| SPAST | 8135 | 6987 |
| TUBA1A | 6178 | 7845 |
| TUBA1B | 1572 | 6394 |
| TUBA1C | 7082 | 7744 |
| TUBA3D | -4511 | -9736 |
| TUBA4A | 652 | 7677 |
| TUBA4B | -4789 | 3660 |
| TUBA8 | 8044 | 7112 |
| TUBB1 | 6239 | 6225 |
| TUBB2A | 8108 | 9349 |
| TUBB3 | -1306 | 3835 |
| TUBB4A | -6145 | -8199 |
| TUBB4B | 6246 | 7789 |
| TUBB6 | 1680 | 7491 |
| VPS4A | -5744 | 4778 |
BBSome-mediated cargo-targeting to cilium
| metric | value |
|---|---|
| setSize | 22 |
| pMANOVA | 0.00802 |
| p.adjustMANOVA | 0.0212 |
| s.dist | 0.272 |
| s.low.CRP | 0.0508 |
| s.high.CRP | -0.268 |
| p.low.CRP | 0.68 |
| p.high.CRP | 0.0298 |
| Gene | low CRP | high CRP |
|---|---|---|
| BBIP1 | 6199 | -8379 |
| CCT2 | 1978 | -8922 |
| LZTFL1 | 1730 | -7901 |
| low CRP | high CRP | |
|---|---|---|
| ARL6 | -6388 | -9392 |
| BBIP1 | 6199 | -8379 |
| BBS1 | -4722 | -8914 |
| BBS10 | -5216 | -6916 |
| BBS12 | -3237 | -3751 |
| BBS2 | -6226 | -8744 |
| BBS4 | -9893 | -8667 |
| BBS5 | -2607 | -7149 |
| BBS7 | 7837 | 708 |
| BBS9 | -7889 | -7637 |
| CCT2 | 1978 | -8922 |
| CCT3 | -1967 | 394 |
| CCT4 | 5187 | 393 |
| CCT5 | 8265 | 6849 |
| CCT8 | 8723 | 5878 |
| LZTFL1 | 1730 | -7901 |
| MCHR1 | -3531 | -4084 |
| MKKS | 7131 | 2033 |
| RAB3IP | 6917 | 2082 |
| SSTR3 | -7134 | -9333 |
| TCP1 | 7677 | 2853 |
| TTC8 | -3586 | 3343 |
Regulated proteolysis of p75NTR
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.00894 |
| p.adjustMANOVA | 0.0231 |
| s.dist | 0.547 |
| s.low.CRP | 0.194 |
| s.high.CRP | 0.512 |
| p.low.CRP | 0.266 |
| p.high.CRP | 0.00327 |
| Gene | low CRP | high CRP |
|---|---|---|
| NCSTN | 9503 | 9869 |
| ADAM17 | 8058 | 9718 |
| PSEN1 | 7889 | 8878 |
| NFKB1 | 7857 | 6377 |
| APH1B | 6306 | 6678 |
| PSENEN | 2692 | 7551 |
| low CRP | high CRP | |
|---|---|---|
| ADAM17 | 8058 | 9718 |
| APH1A | -3379 | 6321 |
| APH1B | 6306 | 6678 |
| NCSTN | 9503 | 9869 |
| NFKB1 | 7857 | 6377 |
| NGFR | -8252 | -253 |
| PSEN1 | 7889 | 8878 |
| PSEN2 | -5169 | -5867 |
| PSENEN | 2692 | 7551 |
| RELA | -7305 | 2739 |
| TRAF6 | -1767 | 2089 |
Sema4D in semaphorin signaling
| metric | value |
|---|---|
| setSize | 22 |
| pMANOVA | 0.000376 |
| p.adjustMANOVA | 0.00156 |
| s.dist | 0.475 |
| s.low.CRP | 0.138 |
| s.high.CRP | 0.455 |
| p.low.CRP | 0.264 |
| p.high.CRP | 0.000223 |
| Gene | low CRP | high CRP |
|---|---|---|
| ARHGEF11 | 9867 | 9882 |
| RAC1 | 9052 | 9614 |
| MYL9 | 9640 | 7741 |
| RHOA | 8351 | 8888 |
| LIMK2 | 8349 | 8299 |
| ROCK1 | 8315 | 7930 |
| MYL6 | 6786 | 9643 |
| ROCK2 | 7628 | 6719 |
| PLXNB1 | 4183 | 6269 |
| MYH9 | 1879 | 8348 |
| low CRP | high CRP | |
|---|---|---|
| ARHGAP35 | -6993 | 1378 |
| ARHGEF11 | 9867 | 9882 |
| ARHGEF12 | -213 | 4295 |
| ERBB2 | -11251 | -9287 |
| LIMK1 | -2747 | 6617 |
| LIMK2 | 8349 | 8299 |
| MYH10 | -7101 | 3044 |
| MYH11 | 1903 | -4778 |
| MYH9 | 1879 | 8348 |
| MYL12B | -2612 | 6816 |
| MYL6 | 6786 | 9643 |
| MYL9 | 9640 | 7741 |
| PLXNB1 | 4183 | 6269 |
| RAC1 | 9052 | 9614 |
| RHOA | 8351 | 8888 |
| RHOB | -4807 | 3859 |
| RHOC | -11158 | -4627 |
| RND1 | -1747 | -757 |
| ROCK1 | 8315 | 7930 |
| ROCK2 | 7628 | 6719 |
| RRAS | -5315 | 5342 |
| SEMA4D | -2346 | -627 |
Post-chaperonin tubulin folding pathway
| metric | value |
|---|---|
| setSize | 19 |
| pMANOVA | 0.00549 |
| p.adjustMANOVA | 0.0155 |
| s.dist | 0.367 |
| s.low.CRP | 0.0476 |
| s.high.CRP | 0.364 |
| p.low.CRP | 0.719 |
| p.high.CRP | 0.00599 |
| Gene | low CRP | high CRP |
|---|---|---|
| TUBB2A | 8108 | 9349 |
| TUBA8 | 8044 | 7112 |
| TUBA1C | 7082 | 7744 |
| TUBB4B | 6246 | 7789 |
| TUBA1A | 6178 | 7845 |
| TUBB1 | 6239 | 6225 |
| TBCA | 5661 | 5870 |
| TUBB6 | 1680 | 7491 |
| TUBA1B | 1572 | 6394 |
| TUBA4A | 652 | 7677 |
| low CRP | high CRP | |
|---|---|---|
| ARL2 | -5078 | 2617 |
| TBCA | 5661 | 5870 |
| TBCB | -7971 | 6771 |
| TBCC | -10293 | -4108 |
| TBCD | -9289 | -5231 |
| TBCE | -3383 | 256 |
| TUBA1A | 6178 | 7845 |
| TUBA1B | 1572 | 6394 |
| TUBA1C | 7082 | 7744 |
| TUBA3D | -4511 | -9736 |
| TUBA4A | 652 | 7677 |
| TUBA4B | -4789 | 3660 |
| TUBA8 | 8044 | 7112 |
| TUBB1 | 6239 | 6225 |
| TUBB2A | 8108 | 9349 |
| TUBB3 | -1306 | 3835 |
| TUBB4A | -6145 | -8199 |
| TUBB4B | 6246 | 7789 |
| TUBB6 | 1680 | 7491 |
Constitutive Signaling by AKT1 E17K in Cancer
| metric | value |
|---|---|
| setSize | 26 |
| pMANOVA | 0.00424 |
| p.adjustMANOVA | 0.0125 |
| s.dist | 0.265 |
| s.low.CRP | -0.0539 |
| s.high.CRP | 0.259 |
| p.low.CRP | 0.634 |
| p.high.CRP | 0.0223 |
| Gene | low CRP | high CRP |
|---|---|---|
| AKT2 | -8391 | 5504 |
| AKT1 | -4794 | 6231 |
| RPS6KB2 | -4855 | 4416 |
| TSC2 | -4535 | 2859 |
| MLST8 | -3991 | 2978 |
| FOXO4 | -615 | 8296 |
| low CRP | high CRP | |
|---|---|---|
| AKT1 | -4794 | 6231 |
| AKT1S1 | 8045 | 8241 |
| AKT2 | -8391 | 5504 |
| AKT3 | -9616 | -10833 |
| BAD | 1009 | 8765 |
| CASP9 | 5303 | 9133 |
| CDKN1A | 3621 | 5190 |
| CDKN1B | -9926 | -2672 |
| CHUK | 9198 | 7663 |
| CREB1 | 4878 | -3476 |
| FOXO1 | -4402 | -9319 |
| FOXO3 | 8202 | 9854 |
| FOXO4 | -615 | 8296 |
| FOXO6 | -9309 | -1189 |
| GSK3A | 5279 | 8683 |
| GSK3B | 6119 | 7526 |
| MAPKAP1 | 2536 | 5925 |
| MDM2 | 7204 | 3892 |
| MLST8 | -3991 | 2978 |
| MTOR | -10419 | -3248 |
| NR4A1 | -7773 | -6467 |
| PDPK1 | 2392 | 7816 |
| PRR5 | -11173 | -8620 |
| RICTOR | -3978 | -9726 |
| RPS6KB2 | -4855 | 4416 |
| TSC2 | -4535 | 2859 |
Regulation of glycolysis by fructose 2,6-bisphosphate metabolism
| metric | value |
|---|---|
| setSize | 11 |
| pMANOVA | 0.0186 |
| p.adjustMANOVA | 0.0411 |
| s.dist | 0.485 |
| s.low.CRP | 0.149 |
| s.high.CRP | 0.461 |
| p.low.CRP | 0.392 |
| p.high.CRP | 0.0081 |
| Gene | low CRP | high CRP |
|---|---|---|
| PRKACA | 9885 | 10068 |
| PFKFB4 | 9668 | 9897 |
| PPP2CA | 8810 | 8328 |
| PFKFB3 | 7624 | 9236 |
| PPP2CB | 8482 | 7631 |
| PPP2R1B | 2503 | 437 |
| low CRP | high CRP | |
|---|---|---|
| PFKFB1 | -7223 | -6744 |
| PFKFB2 | -9116 | 8194 |
| PFKFB3 | 7624 | 9236 |
| PFKFB4 | 9668 | 9897 |
| PPP2CA | 8810 | 8328 |
| PPP2CB | 8482 | 7631 |
| PPP2R1A | -3087 | 6994 |
| PPP2R1B | 2503 | 437 |
| PPP2R5D | -6508 | 4985 |
| PRKACA | 9885 | 10068 |
| PRKACB | -9852 | -10936 |
Here is the session info with all the versions of packages used.
sessionInfo()
## R version 4.0.3 (2020-10-10)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 18.04.5 LTS
##
## Matrix products: default
## BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
##
## locale:
## [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
## [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
## [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
## [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] parallel stats4 stats graphics grDevices utils datasets
## [8] methods base
##
## other attached packages:
## [1] pkgload_1.1.0 GGally_2.0.0
## [3] beeswarm_0.2.3 gtools_3.8.2
## [5] echarts4r_0.3.3 eulerr_6.1.0
## [7] mitch_1.2.2 MASS_7.3-53
## [9] fgsea_1.16.0 gplots_3.1.0
## [11] DESeq2_1.30.0 SummarizedExperiment_1.20.0
## [13] Biobase_2.50.0 MatrixGenerics_1.2.0
## [15] matrixStats_0.57.0 GenomicRanges_1.42.0
## [17] GenomeInfoDb_1.26.0 IRanges_2.24.0
## [19] S4Vectors_0.28.0 BiocGenerics_0.36.0
## [21] reshape2_1.4.4 forcats_0.5.0
## [23] stringr_1.4.0 dplyr_1.0.2
## [25] purrr_0.3.4 readr_1.4.0
## [27] tidyr_1.1.2 tibble_3.0.4
## [29] ggplot2_3.3.2 tidyverse_1.3.0
##
## loaded via a namespace (and not attached):
## [1] colorspace_2.0-0 ellipsis_0.3.1 rprojroot_1.3-2
## [4] XVector_0.30.0 fs_1.5.0 rstudioapi_0.12
## [7] farver_2.0.3 bit64_4.0.5 AnnotationDbi_1.52.0
## [10] fansi_0.4.1 lubridate_1.7.9 xml2_1.3.2
## [13] splines_4.0.3 geneplotter_1.68.0 knitr_1.30
## [16] polyclip_1.10-0 jsonlite_1.7.1 broom_0.7.2
## [19] annotate_1.68.0 dbplyr_2.0.0 shiny_1.5.0
## [22] compiler_4.0.3 httr_1.4.2 backports_1.2.0
## [25] assertthat_0.2.1 Matrix_1.2-18 fastmap_1.0.1
## [28] cli_2.1.0 later_1.1.0.1 htmltools_0.5.0
## [31] tools_4.0.3 gtable_0.3.0 glue_1.4.2
## [34] GenomeInfoDbData_1.2.4 fastmatch_1.1-0 Rcpp_1.0.5
## [37] cellranger_1.1.0 vctrs_0.3.4 polylabelr_0.2.0
## [40] xfun_0.19 ps_1.4.0 testthat_3.0.0
## [43] rvest_0.3.6 mime_0.9 lifecycle_0.2.0
## [46] XML_3.99-0.5 zlibbioc_1.36.0 scales_1.1.1
## [49] hms_0.5.3 promises_1.1.1 RColorBrewer_1.1-2
## [52] yaml_2.2.1 memoise_1.1.0 gridExtra_2.3
## [55] reshape_0.8.8 stringi_1.5.3 RSQLite_2.2.1
## [58] highr_0.8 genefilter_1.72.0 desc_1.2.0
## [61] caTools_1.18.0 BiocParallel_1.24.1 rlang_0.4.8
## [64] pkgconfig_2.0.3 bitops_1.0-6 evaluate_0.14
## [67] lattice_0.20-41 labeling_0.4.2 htmlwidgets_1.5.2
## [70] bit_4.0.4 tidyselect_1.1.0 plyr_1.8.6
## [73] magrittr_1.5 R6_2.5.0 generics_0.1.0
## [76] DelayedArray_0.16.0 DBI_1.1.0 pillar_1.4.6
## [79] haven_2.3.1 withr_2.3.0 survival_3.2-7
## [82] RCurl_1.98-1.2 modelr_0.1.8 crayon_1.3.4
## [85] KernSmooth_2.23-18 rmarkdown_2.5 locfit_1.5-9.4
## [88] grid_4.0.3 readxl_1.3.1 data.table_1.13.2
## [91] blob_1.2.1 reprex_0.3.0 digest_0.6.27
## [94] xtable_1.8-4 httpuv_1.5.4 munsell_0.5.0
END of report