Sample Skewer_mqc-generalstats-skewer-pct_trimmed FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences EA11-1_S4_L001_R1_001 9.108949780634726 39.95007096298232 50.0 101.0 0.0 10177943.0 EA11-1_S4_L001_R2_001 41.89623786497455 51.0 101.0 0.0 10177943.0 EA11-1_S4_L002_R1_001 8.388674032530526 39.422435558901135 50.0 101.0 0.0 10279527.0 EA11-1_S4_L002_R2_001 41.78067687536701 51.0 101.0 0.0 10279527.0 EA11-2_S28_L001_R1_001 10.247505501476414 46.808417651873114 50.0 101.0 0.0 11545030.0 EA11-2_S28_L001_R2_001 46.37348809337938 51.0 101.0 0.0 11545030.0 EA11-2_S28_L002_R1_001 9.485396949910223 46.15858521846556 50.0 101.0 0.0 11663687.0 EA11-2_S28_L002_R2_001 45.9629075483575 51.0 101.0 0.0 11663687.0 EA11-3_S52_L001_R1_001 10.769275067928024 43.08594714674619 49.0 101.0 0.0 9954969.0 EA11-3_S52_L001_R2_001 42.7463411618269 50.0 101.0 0.0 9954969.0 EA11-3_S52_L002_R1_001 9.973016182593064 42.14293029224454 49.0 101.0 0.0 10026353.0 EA11-3_S52_L002_R2_001 42.31018709310443 50.0 101.0 0.0 10026353.0 EA11-4_S76_L001_R1_001 9.871806724463472 43.94222203919787 50.0 101.0 0.0 9666882.0 EA11-4_S76_L001_R2_001 44.547479294079814 50.0 101.0 0.0 9666882.0 EA11-4_S76_L002_R1_001 9.114680897374317 43.161331622853204 50.0 101.0 0.0 9737453.0 EA11-4_S76_L002_R2_001 44.379501505188 50.0 101.0 0.0 9737453.0 EA11-5_S32_L001_R1_001 9.47130215089547 49.21015932190992 49.0 101.0 0.0 11082056.0 EA11-5_S32_L001_R2_001 50.39473392611084 50.0 101.0 9.090909090909092 11082056.0 EA11-5_S32_L002_R1_001 8.774328979474666 48.34479864695497 49.0 101.0 0.0 11186840.0 EA11-5_S32_L002_R2_001 49.999424867925356 50.0 101.0 0.0 11186840.0 EA12-1_S5_L001_R1_001 9.197034158037587 48.2215321057282 50.0 101.0 0.0 11235583.0 EA12-1_S5_L001_R2_001 50.19015621121041 51.0 101.0 9.090909090909092 11235583.0 EA12-1_S5_L002_R1_001 8.48600693014358 47.60747813504844 50.0 101.0 0.0 11330826.0 EA12-1_S5_L002_R2_001 50.04342407634179 51.0 101.0 9.090909090909092 11330826.0 EA12-2_S29_L001_R1_001 9.458608263502876 47.55452307803031 50.0 101.0 0.0 11229434.0 EA12-2_S29_L001_R2_001 47.48805126871839 51.0 101.0 0.0 11229434.0 EA12-2_S29_L002_R1_001 8.739433531764869 47.003218952289316 50.0 101.0 0.0 11336116.0 EA12-2_S29_L002_R2_001 47.087748056916745 51.0 101.0 0.0 11336116.0 EA12-3_S53_L001_R1_001 8.969009559744691 42.11831315176945 53.0 101.0 0.0 8578892.0 EA12-3_S53_L001_R2_001 44.21105369796804 53.0 101.0 0.0 8578892.0 EA12-3_S53_L002_R1_001 8.310464024467667 41.11267048351952 53.0 101.0 0.0 8683259.0 EA12-3_S53_L002_R2_001 43.769342942517916 53.0 101.0 0.0 8683259.0 EA12-4_S77_L001_R1_001 10.49939077859805 48.641187802782696 49.0 101.0 0.0 12122475.0 EA12-4_S77_L001_R2_001 47.84594754472587 50.0 101.0 0.0 12122475.0 EA12-4_S77_L002_R1_001 9.69672966822906 47.47174817914719 49.0 101.0 0.0 12217671.0 EA12-4_S77_L002_R2_001 47.409851875040665 50.0 101.0 0.0 12217671.0 EA12-5_S40_L001_R1_001 10.371367063702216 45.284240128020926 49.0 101.0 0.0 11502021.0 EA12-5_S40_L001_R2_001 46.86532657541655 50.0 101.0 0.0 11502021.0 EA12-5_S40_L002_R1_001 9.549992599843687 44.59939170818746 49.0 101.0 0.0 11584457.0 EA12-5_S40_L002_R2_001 46.8383555373875 50.0 101.0 0.0 11584457.0 EA13-1_S20_L001_R1_001 9.638106603329488 44.57899695921016 50.0 101.0 0.0 11966493.0 EA13-1_S20_L001_R2_001 46.41610370563668 51.0 101.0 0.0 11966493.0 EA13-1_S20_L002_R1_001 8.876849877155637 43.67069341664605 50.0 101.0 0.0 12053113.0 EA13-1_S20_L002_R2_001 46.21751796003708 51.0 101.0 0.0 12053113.0 EA13-2_S43_L001_R1_001 9.097864259079339 43.91354818279822 51.0 101.0 0.0 11195154.0 EA13-2_S43_L001_R2_001 45.11282854267551 52.0 101.0 0.0 11195154.0 EA13-2_S43_L002_R1_001 8.4265288882179 42.92709521363307 51.0 101.0 0.0 11318719.0 EA13-2_S43_L002_R2_001 44.76668519904017 52.0 101.0 0.0 11318719.0 EA13-3_S68_L001_R1_001 9.865549755192777 43.95687602335205 50.0 101.0 0.0 11280204.0 EA13-3_S68_L001_R2_001 45.67465805129805 51.0 101.0 0.0 11280204.0 EA13-3_S68_L002_R1_001 9.111933852444498 43.07593448109432 50.0 101.0 0.0 11351877.0 EA13-3_S68_L002_R2_001 45.44545095184927 51.0 101.0 0.0 11351877.0 EA13-4_S92_L001_R1_001 10.37347321403826 43.70723071580937 50.0 101.0 9.090909090909092 10807975.0 EA13-4_S92_L001_R2_001 43.19643435055854 51.0 101.0 0.0 10807975.0 EA13-4_S92_L002_R1_001 9.584086799276673 43.24201972642202 50.0 101.0 9.090909090909092 10885405.0 EA13-4_S92_L002_R2_001 43.34324199161513 50.0 101.0 0.0 10885405.0 EA13-5_S100_L001_R1_001 10.272661117265143 45.21443235711982 49.0 101.0 0.0 10221089.0 EA13-5_S100_L001_R2_001 46.250388427198615 50.0 101.0 0.0 10221089.0 EA13-5_S100_L002_R1_001 9.475770630145968 44.64915782176334 49.0 101.0 0.0 10271477.0 EA13-5_S100_L002_R2_001 46.12268824250661 50.0 101.0 0.0 10271477.0 EA14-1_S21_L001_R1_001 9.612840946922043 42.486576625099325 50.0 101.0 0.0 10985696.0 EA14-1_S21_L001_R2_001 44.434870947411 51.0 101.0 0.0 10985696.0 EA14-1_S21_L002_R1_001 8.920326676286713 41.82869403437599 50.0 101.0 0.0 11088263.0 EA14-1_S21_L002_R2_001 44.15582841510116 51.0 101.0 0.0 11088263.0 EA14-2_S44_L001_R1_001 9.324091450023237 42.19825180359581 51.0 101.0 0.0 11626481.0 EA14-2_S44_L001_R2_001 43.57185003608506 52.0 101.0 0.0 11626481.0 EA14-2_S44_L002_R1_001 8.645104044080599 41.27088917251235 51.0 101.0 0.0 11727197.0 EA14-2_S44_L002_R2_001 43.24147876197646 52.0 101.0 0.0 11727197.0 EA14-4_S93_L001_R1_001 10.581290092260321 52.75019798520922 49.0 101.0 18.181818181818183 11413975.0 EA14-4_S93_L001_R2_001 52.48426471040006 50.0 101.0 9.090909090909092 11413975.0 EA14-4_S93_L002_R1_001 9.845780080014487 51.55640678193815 49.0 101.0 27.27272727272727 11480403.0 EA14-4_S93_L002_R2_001 51.901080665920354 50.0 101.0 9.090909090909092 11480403.0 EA14-5_S101_L001_R1_001 10.288541728284388 43.9927509383237 49.0 101.0 0.0 8407427.0 EA14-5_S101_L001_R2_001 44.448291304194655 50.0 101.0 0.0 8407427.0 EA14-5_S101_L002_R1_001 9.458129068433887 43.271635215914785 49.0 101.0 0.0 8467737.0 EA14-5_S101_L002_R2_001 44.27172021041207 50.0 101.0 0.0 8467737.0 EA15-3_S69_L001_R1_001 10.251422304166601 47.94455639792709 51.0 101.0 0.0 11109308.0 EA15-3_S69_L001_R2_001 49.814098873334785 52.0 101.0 0.0 11109308.0 EA15-3_S69_L002_R1_001 9.476331474329857 46.78178491228161 51.0 101.0 0.0 11173650.0 EA15-3_S69_L002_R2_001 49.31824021775767 51.0 101.0 0.0 11173650.0 EA16-2_S45_L001_R1_001 9.022073722281965 43.40612088360396 52.0 101.0 0.0 9267382.0 EA16-2_S45_L001_R2_001 45.40218659429891 53.0 101.0 0.0 9267382.0 EA16-2_S45_L002_R1_001 8.372106496884625 42.40402164424552 52.0 101.0 0.0 9367905.0 EA16-2_S45_L002_R2_001 44.85611761803479 53.0 101.0 0.0 9367905.0 EA19-1_S22_L001_R1_001 9.261925896095171 39.86322667808373 50.0 101.0 0.0 9754019.0 EA19-1_S22_L001_R2_001 42.03596585800749 51.0 101.0 0.0 9754019.0 EA19-1_S22_L002_R1_001 8.533264359183226 39.365824554482195 50.0 101.0 0.0 9849977.0 EA19-1_S22_L002_R2_001 41.70650782249511 51.0 101.0 0.0 9849977.0 EA19-2_S46_L001_R1_001 9.537907490785061 39.98260139917756 50.0 101.0 0.0 9931472.0 EA19-2_S46_L001_R2_001 40.76027417438257 51.0 101.0 0.0 9931472.0 EA19-2_S46_L002_R1_001 8.784300697792904 39.397858860701405 50.0 101.0 0.0 10028017.0 EA19-2_S46_L002_R2_001 40.976166367031084 51.0 101.0 0.0 10028017.0 EA19-3_S70_L001_R1_001 10.56442813758228 40.082699483999164 50.0 101.0 0.0 9111206.0 EA19-3_S70_L001_R2_001 40.954650074629306 51.0 101.0 0.0 9111206.0 EA19-3_S70_L002_R1_001 9.746326890862495 39.619702316118655 50.0 101.0 0.0 9162549.0 EA19-3_S70_L002_R2_001 40.75111835928008 51.0 101.0 0.0 9162549.0 EA19-4_S94_L001_R1_001 9.922362282544846 46.74058430524733 50.0 101.0 9.090909090909092 11388764.0 EA19-4_S94_L001_R2_001 47.010784753362636 51.0 101.0 9.090909090909092 11388764.0 EA19-4_S94_L002_R1_001 9.21614581285265 45.9581123133323 50.0 101.0 9.090909090909092 11465982.0 EA19-4_S94_L002_R2_001 46.72234095009191 51.0 101.0 9.090909090909092 11465982.0 EA19-5_S102_L001_R1_001 10.353869170512965 43.43576507765786 49.0 101.0 0.0 9661682.0 EA19-5_S102_L001_R2_001 44.07199213508236 50.0 101.0 0.0 9661682.0 EA19-5_S102_L002_R1_001 9.503076874368793 42.92181353911706 49.0 101.0 0.0 9712243.0 EA19-5_S102_L002_R2_001 43.947601560002866 50.0 101.0 0.0 9712243.0 EA20-1_S23_L001_R1_001 9.6420522477686 41.44827611490174 51.0 101.0 0.0 10779853.0 EA20-1_S23_L001_R2_001 42.84261647648135 51.0 101.0 0.0 10779853.0 EA20-1_S23_L002_R1_001 8.909177718784134 40.73229063340077 51.0 101.0 0.0 10890540.0 EA20-1_S23_L002_R2_001 42.66744309968578 51.0 101.0 0.0 10890540.0 EA20-2_S47_L001_R1_001 8.676596623961279 39.685115531729764 51.0 101.0 0.0 10005342.0 EA20-2_S47_L001_R2_001 41.8508107857514 52.0 101.0 0.0 10005342.0 EA20-2_S47_L002_R1_001 8.00553681659191 38.59138418946934 51.0 101.0 0.0 10109641.0 EA20-2_S47_L002_R2_001 41.60709201378101 52.0 101.0 0.0 10109641.0 EA20-3_S71_L001_R1_001 10.546727342992757 42.106167289875295 49.0 101.0 0.0 9946761.0 EA20-3_S71_L001_R2_001 43.15256129490403 50.0 101.0 0.0 9946761.0 EA20-3_S71_L002_R1_001 9.707920671775828 41.27910284142231 49.0 101.0 0.0 9974068.0 EA20-3_S71_L002_R2_001 42.89830862446402 50.0 101.0 0.0 9974068.0 EA20-4_S95_L001_R1_001 10.485401680574892 49.8335571278103 51.0 101.0 9.090909090909092 11449046.0 EA20-4_S95_L001_R2_001 50.00404069872176 52.0 101.0 18.181818181818183 11449046.0 EA20-4_S95_L002_R1_001 9.765030268563413 49.1318762804141 51.0 101.0 9.090909090909092 11527012.0 EA20-4_S95_L002_R2_001 49.855879371170694 52.0 101.0 9.090909090909092 11527012.0 EA20-5_S103_L001_R1_001 10.395537911981172 46.4985052176933 49.0 101.0 0.0 9850753.0 EA20-5_S103_L001_R2_001 47.17946137783694 50.0 101.0 0.0 9850753.0 EA20-5_S103_L002_R1_001 9.607893959322787 45.935058275137706 49.0 101.0 0.0 9940860.0 EA20-5_S103_L002_R2_001 46.75430271912613 50.0 101.0 0.0 9940860.0 EA22-5_S56_L001_R1_001 9.637490994621675 41.43971314877148 52.0 101.0 0.0 9997603.0 EA22-5_S56_L001_R2_001 42.50504942725066 52.0 101.0 0.0 9997603.0 EA22-5_S56_L002_R1_001 8.928033194954748 40.77598096737152 52.0 101.0 0.0 10078399.0 EA22-5_S56_L002_R2_001 42.421974173698494 52.0 101.0 0.0 10078399.0 EA23-5_S64_L001_R1_001 9.987347265884233 52.246191365996104 52.0 101.0 9.090909090909092 13077601.0 EA23-5_S64_L001_R2_001 52.86349697719701 52.0 101.0 9.090909090909092 13077601.0 EA23-5_S64_L002_R1_001 9.214152718837456 51.315744045370515 52.0 101.0 9.090909090909092 13192660.0 EA23-5_S64_L002_R2_001 52.25750572140494 52.0 101.0 9.090909090909092 13192660.0 EA24-1_S9_L001_R1_001 9.872530245003771 46.671647708135936 50.0 101.0 0.0 11225177.0 EA24-1_S9_L001_R2_001 47.10318157493785 51.0 101.0 0.0 11225177.0 EA24-1_S9_L002_R1_001 9.142122677706514 45.66931513325137 50.0 101.0 0.0 11324283.0 EA24-1_S9_L002_R2_001 46.87767749732817 51.0 101.0 0.0 11324283.0 EA24-2_S33_L001_R1_001 9.438659040644904 44.133105752270666 51.0 101.0 0.0 11649391.0 EA24-2_S33_L001_R2_001 45.6266139469073 52.0 101.0 0.0 11649391.0 EA24-2_S33_L002_R1_001 8.786825478142077 43.45983324701601 51.0 101.0 0.0 11729341.0 EA24-2_S33_L002_R2_001 45.393565366246534 52.0 101.0 0.0 11729341.0 EA24-3_S57_L001_R1_001 9.344019760190443 44.66175280515522 52.0 101.0 0.0 10685292.0 EA24-3_S57_L001_R2_001 45.520516449234286 52.0 101.0 0.0 10685292.0 EA24-3_S57_L002_R1_001 8.706198826464107 43.950101281273525 51.0 101.0 0.0 10815608.0 EA24-3_S57_L002_R2_001 45.251919735371196 52.0 101.0 0.0 10815608.0 EA24-4_S81_L001_R1_001 9.799560005659957 46.60047888705253 49.0 101.0 0.0 10719434.0 EA24-4_S81_L001_R2_001 47.926689098073524 50.0 101.0 0.0 10719434.0 EA24-4_S81_L002_R1_001 9.131520431360352 45.665566474128504 49.0 101.0 0.0 10817066.0 EA24-4_S81_L002_R2_001 47.89046127831503 50.0 101.0 0.0 10817066.0 EA24-5_S72_L001_R1_001 10.971765199069784 47.04522769765526 49.0 101.0 0.0 10182853.0 EA24-5_S72_L001_R2_001 47.72074145191871 50.0 101.0 0.0 10182853.0 EA24-5_S72_L002_R1_001 10.138390371987901 45.905994068497726 49.0 101.0 0.0 10227589.0 EA24-5_S72_L002_R2_001 47.36337281964349 50.0 101.0 0.0 10227589.0 EA25-1_S10_L001_R1_001 10.15882018762274 42.93799914979293 50.0 101.0 0.0 11945178.0 EA25-1_S10_L001_R2_001 44.14177802893856 51.0 101.0 0.0 11945178.0 EA25-1_S10_L002_R1_001 9.382117761890257 42.299901713818855 50.0 101.0 0.0 12060369.0 EA25-1_S10_L002_R2_001 44.13750621115078 51.0 101.0 0.0 12060369.0 EA25-2_S34_L001_R1_001 8.346764003792073 41.29403246232045 53.0 101.0 0.0 10122998.0 EA25-2_S34_L001_R2_001 43.76953593981987 53.0 101.0 0.0 10122998.0 EA25-2_S34_L002_R1_001 7.796806699972822 40.77768465459476 53.0 101.0 0.0 10289357.0 EA25-2_S34_L002_R2_001 43.518560968726185 53.0 101.0 0.0 10289357.0 EA25-3_S58_L001_R1_001 9.512182208023189 42.7765557264278 52.0 101.0 0.0 10875011.0 EA25-3_S58_L001_R2_001 44.038187688849526 53.0 101.0 0.0 10875011.0 EA25-3_S58_L002_R1_001 8.814615074167374 42.178363522611015 52.0 101.0 0.0 10996635.0 EA25-3_S58_L002_R2_001 43.71459345581704 53.0 101.0 0.0 10996635.0 EA25-4_S82_L001_R1_001 10.010134391481285 41.08799979667296 50.0 101.0 0.0 9560400.0 EA25-4_S82_L001_R2_001 42.035347110793296 51.0 101.0 0.0 9560400.0 EA25-4_S82_L002_R1_001 9.2178634521459 40.5906036789451 50.0 101.0 0.0 9638664.0 EA25-4_S82_L002_R2_001 42.3348439516902 51.0 101.0 0.0 9638664.0 EA25-5_S80_L001_R1_001 9.615278344649079 43.03553902128615 51.0 101.0 0.0 10246030.0 EA25-5_S80_L001_R2_001 44.50468984262924 51.0 101.0 0.0 10246030.0 EA25-5_S80_L002_R1_001 8.847900514232919 42.31048610820787 51.0 101.0 0.0 10318654.0 EA25-5_S80_L002_R2_001 44.26128770501073 51.0 101.0 0.0 10318654.0 EA26-1_S11_L001_R1_001 9.914674191005878 41.32114076571288 50.0 101.0 0.0 10127481.0 EA26-1_S11_L001_R2_001 43.26173171324815 51.0 101.0 0.0 10127481.0 EA26-1_S11_L002_R1_001 9.19226551249078 40.59781691234272 50.0 101.0 0.0 10258675.0 EA26-1_S11_L002_R2_001 43.12438441762214 51.0 101.0 0.0 10258675.0 EA26-2_S35_L001_R1_001 8.98920214329807 40.26172162505133 52.0 101.0 0.0 9230022.0 EA26-2_S35_L001_R2_001 42.696828142872114 53.0 101.0 0.0 9230022.0 EA26-2_S35_L002_R1_001 8.336895696682953 39.26594744931713 52.0 101.0 0.0 9334543.0 EA26-2_S35_L002_R2_001 42.05878713083304 53.0 101.0 0.0 9334543.0 EA26-3_S59_L001_R1_001 8.550740272159352 42.03930794610399 52.0 101.0 0.0 9717479.0 EA26-3_S59_L001_R2_001 43.4706148696413 52.0 101.0 0.0 9717479.0 EA26-3_S59_L002_R1_001 7.957996086623529 41.236861601516274 52.0 101.0 0.0 9837497.0 EA26-3_S59_L002_R2_001 43.25160009122523 52.0 101.0 0.0 9837497.0 EA26-4_S83_L001_R1_001 10.567212324786526 46.49816449903217 49.0 101.0 0.0 10805191.0 EA26-4_S83_L001_R2_001 46.692170819055676 50.0 101.0 0.0 10805191.0 EA26-4_S83_L002_R1_001 9.78277776280513 45.843591376670744 49.0 101.0 0.0 10889999.0 EA26-4_S83_L002_R2_001 46.44345805413144 50.0 101.0 0.0 10889999.0 EA26-5_S88_L001_R1_001 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