date generated: 2020-07-10

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                    young        old
## 0610009B22Rik -2.9385024 -6.1805927
## 0610009E02Rik  0.6410018 -1.6821055
## 0610009L18Rik -4.5856767 -3.1288917
## 0610010F05Rik  0.6483013  0.4402823
## 0610010K14Rik -8.7879236 -3.0864256
## 0610012G03Rik -8.7415080 -6.4223694

Here are some metrics about the input data profile:

Profile metrics
Profile metrics
num_genes_in_profile 14877
duplicated_genes_present 0
num_profile_genes_in_sets 7299
num_profile_genes_not_in_sets 7578
profile_pearson_correl 0.8374
profile_spearman_correl 0.80977

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: ../ref/ReactomePathways_mouse.gmt

Gene sets metrics
Gene sets metrics
num_genesets 2302
num_genesets_excluded 1023
num_genesets_included 1279

Gene sets by quadrant


Number of significant gene sets (FDR<0.05)= 245

Interactive enrichment scatterplot

All sets with FDR<0.05. Try hovering over the points.

Top N sets irrespective of FDR. Try hovering over the points.

A heatmap of S values for top results


A plot of effect size versus significance


Significance is the -log2(p.adjustMANOVA) and effect size is the s.dist which is the hypotenuse of the s scores.

Results table

Top N= 50 gene sets

set setSize pMANOVA p.adjustMANOVA s.dist s.young s.old p.young p.old
Termination-of-O-glycan-biosynthesis 10 1.12e-03 8.70e-03 0.391 0.3910 -0.005260 3.24e-02 9.77e-01
Presynaptic-depolarization-and-calcium-channel-opening 10 2.06e-03 1.45e-02 0.396 0.0225 0.395000 9.02e-01 3.06e-02
Synaptic-adhesion-like-molecules 15 1.73e-03 1.27e-02 0.285 0.2830 -0.034700 5.76e-02 8.16e-01
Interferon-alpha/beta-signaling 40 1.39e-08 4.33e-07 0.363 0.0479 0.360000 6.01e-01 8.18e-05
The-canonical-retinoid-cycle-in-rods-(twilight-vision) 12 4.09e-04 3.79e-03 0.609 0.2450 0.557000 1.41e-01 8.31e-04
N-glycan-antennae-elongation-in-the-medial/trans-Golgi 20 2.41e-04 2.49e-03 0.355 0.3510 0.053100 6.62e-03 6.81e-01
Chemokine-receptors-bind-chemokines 20 2.50e-03 1.65e-02 0.303 0.2990 0.047400 2.05e-02 7.14e-01
O-linked-glycosylation-of-mucins 32 1.25e-05 2.29e-04 0.411 0.3860 0.141000 1.55e-04 1.69e-01
HS-GAG-biosynthesis 23 1.16e-04 1.41e-03 0.475 0.4340 0.192000 3.13e-04 1.12e-01
WNT5A-dependent-internalization-of-FZD2,-FZD5-and-ROR2 13 5.29e-03 3.18e-02 0.492 0.4460 0.206000 5.33e-03 1.98e-01
HS-GAG-degradation 18 4.70e-04 4.23e-03 0.526 0.4710 0.234000 5.46e-04 8.52e-02
FOXO-mediated-transcription-of-oxidative-stress,-metabolic-and-neuronal-genes 23 9.53e-03 4.97e-02 0.162 0.0955 -0.131000 4.28e-01 2.77e-01
Sialic-acid-metabolism 26 3.27e-03 2.07e-02 0.239 0.2380 0.016800 3.55e-02 8.82e-01
Downregulation-of-SMAD2/3:SMAD4-transcriptional-activity 23 6.01e-03 3.47e-02 0.250 0.2480 0.028000 3.95e-02 8.17e-01
Synthesis-of-active-ubiquitin:-roles-of-E1-and-E2-enzymes 29 3.25e-03 2.07e-02 0.225 -0.0147 -0.225000 8.91e-01 3.62e-02
Triglyceride-catabolism 15 9.29e-06 1.75e-04 0.868 -0.5030 -0.708000 7.41e-04 2.07e-06
Ubiquitin-Mediated-Degradation-of-Phosphorylated-Cdc25A 48 2.72e-05 4.30e-04 0.339 -0.3150 -0.127000 1.64e-04 1.29e-01
p53-Independent-DNA-Damage-Response 48 2.72e-05 4.30e-04 0.339 -0.3150 -0.127000 1.64e-04 1.29e-01
p53-Independent-G1/S-DNA-damage-checkpoint 48 2.72e-05 4.30e-04 0.339 -0.3150 -0.127000 1.64e-04 1.29e-01
Assembly-of-the-pre-replicative-complex 64 6.67e-05 9.17e-04 0.186 -0.1860 -0.000335 9.99e-03 9.96e-01
Regulation-of-ornithine-decarboxylase-(ODC) 46 3.97e-05 5.96e-04 0.347 -0.3200 -0.135000 1.73e-04 1.13e-01
Autodegradation-of-the-E3-ubiquitin-ligase-COP1 47 7.41e-05 9.77e-04 0.315 -0.2950 -0.110000 4.69e-04 1.92e-01
Heparan-sulfate/heparin-(HS-GAG)-metabolism 42 1.75e-07 4.23e-06 0.551 0.4710 0.287000 1.31e-07 1.31e-03
Endosomal-Sorting-Complex-Required-For-Transport-(ESCRT) 30 7.64e-03 4.20e-02 0.229 0.2250 0.041200 3.28e-02 6.96e-01
Post-NMDA-receptor-activation-events 50 1.31e-03 9.94e-03 0.136 0.1220 -0.060900 1.36e-01 4.56e-01
RAB-geranylgeranylation 51 1.00e-03 8.01e-03 0.148 0.1420 -0.041000 8.01e-02 6.13e-01
DNA-Replication-Pre-Initiation 80 2.28e-05 3.89e-04 0.146 -0.1390 0.042600 3.15e-02 5.10e-01
Stabilization-of-p53 51 7.50e-05 9.79e-04 0.291 -0.2760 -0.094000 6.62e-04 2.46e-01
Smooth-Muscle-Contraction 31 9.21e-03 4.83e-02 0.213 0.0314 0.211000 7.62e-01 4.21e-02
Activation-of-the-pre-replicative-complex 32 5.28e-03 3.18e-02 0.247 0.0599 0.239000 5.58e-01 1.91e-02
Ubiquitin-dependent-degradation-of-Cyclin-D 48 1.72e-04 1.90e-03 0.288 -0.2720 -0.093600 1.11e-03 2.62e-01
Regulation-of-activated-PAK-2p34-by-proteasome-mediated-degradation 46 6.86e-05 9.33e-04 0.343 -0.3150 -0.137000 2.24e-04 1.08e-01
Protein-ubiquitination 62 3.31e-04 3.24e-03 0.156 0.0222 -0.154000 7.62e-01 3.60e-02
TNFs-bind-their-physiological-receptors 12 6.81e-03 3.84e-02 0.609 0.3340 0.509000 4.52e-02 2.25e-03
AUF1-(hnRNP-D0)-binds-and-destabilizes-mRNA 50 9.96e-05 1.22e-03 0.308 -0.2860 -0.113000 4.63e-04 1.68e-01
Orc1-removal-from-chromatin 66 9.92e-05 1.22e-03 0.203 -0.2010 -0.027600 4.76e-03 6.98e-01
CDT1-association-with-the-CDC6:ORC:origin-complex 55 2.89e-05 4.51e-04 0.320 -0.2960 -0.123000 1.49e-04 1.16e-01
Cross-presentation-of-soluble-exogenous-antigens-(endosomes) 44 5.19e-04 4.61e-03 0.289 -0.2710 -0.100000 1.86e-03 2.50e-01
Intra-Golgi-traffic 41 5.73e-03 3.32e-02 0.168 0.1680 -0.002910 6.30e-02 9.74e-01
Regulation-of-Apoptosis 49 1.45e-05 2.61e-04 0.390 -0.3470 -0.177000 2.60e-05 3.17e-02
Vpu-mediated-degradation-of-CD4 48 5.10e-05 7.25e-04 0.358 -0.3230 -0.154000 1.09e-04 6.44e-02
Degradation-of-AXIN 51 2.92e-04 2.94e-03 0.276 -0.2590 -0.093300 1.36e-03 2.49e-01
Vif-mediated-degradation-of-APOBEC3G 48 3.71e-05 5.65e-04 0.376 -0.3350 -0.170000 5.91e-05 4.14e-02
Class-I-peroxisomal-membrane-protein-import 19 1.70e-04 1.90e-03 0.660 -0.3770 -0.542000 4.41e-03 4.30e-05
Negative-regulation-of-NOTCH4-signaling 51 1.22e-04 1.47e-03 0.318 -0.2910 -0.128000 3.29e-04 1.14e-01
SCF-beta-TrCP-mediated-degradation-of-Emi1 51 8.26e-05 1.06e-03 0.335 -0.3030 -0.142000 1.81e-04 8.02e-02
DARPP-32-events 22 7.90e-03 4.31e-02 0.395 -0.1870 -0.348000 1.29e-01 4.75e-03
Regulation-of-RUNX3-expression-and-activity 52 2.51e-03 1.65e-02 0.177 -0.1760 -0.016500 2.83e-02 8.37e-01
Biosynthesis-of-the-N-glycan-precursor-(dolichol-lipid-linked-oligosaccharide,-LLO)-and-transfer-to-a-nascent-protein 69 6.68e-04 5.77e-03 0.143 0.1420 -0.017200 4.15e-02 8.04e-01
The-role-of-GTSE1-in-G2/M-progression-after-G2-checkpoint 55 1.73e-03 1.27e-02 0.179 -0.1780 -0.019000 2.23e-02 8.08e-01


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pMANOVA p.adjustMANOVA s.dist s.young s.old p.young p.old
Termination-of-O-glycan-biosynthesis 10 1.12e-03 8.70e-03 0.3910 0.3910 -0.005260 3.24e-02 9.77e-01
Presynaptic-depolarization-and-calcium-channel-opening 10 2.06e-03 1.45e-02 0.3960 0.0225 0.395000 9.02e-01 3.06e-02
Synaptic-adhesion-like-molecules 15 1.73e-03 1.27e-02 0.2850 0.2830 -0.034700 5.76e-02 8.16e-01
Interferon-alpha/beta-signaling 40 1.39e-08 4.33e-07 0.3630 0.0479 0.360000 6.01e-01 8.18e-05
The-canonical-retinoid-cycle-in-rods-(twilight-vision) 12 4.09e-04 3.79e-03 0.6090 0.2450 0.557000 1.41e-01 8.31e-04
N-glycan-antennae-elongation-in-the-medial/trans-Golgi 20 2.41e-04 2.49e-03 0.3550 0.3510 0.053100 6.62e-03 6.81e-01
Chemokine-receptors-bind-chemokines 20 2.50e-03 1.65e-02 0.3030 0.2990 0.047400 2.05e-02 7.14e-01
O-linked-glycosylation-of-mucins 32 1.25e-05 2.29e-04 0.4110 0.3860 0.141000 1.55e-04 1.69e-01
HS-GAG-biosynthesis 23 1.16e-04 1.41e-03 0.4750 0.4340 0.192000 3.13e-04 1.12e-01
WNT5A-dependent-internalization-of-FZD2,-FZD5-and-ROR2 13 5.29e-03 3.18e-02 0.4920 0.4460 0.206000 5.33e-03 1.98e-01
HS-GAG-degradation 18 4.70e-04 4.23e-03 0.5260 0.4710 0.234000 5.46e-04 8.52e-02
FOXO-mediated-transcription-of-oxidative-stress,-metabolic-and-neuronal-genes 23 9.53e-03 4.97e-02 0.1620 0.0955 -0.131000 4.28e-01 2.77e-01
Sialic-acid-metabolism 26 3.27e-03 2.07e-02 0.2390 0.2380 0.016800 3.55e-02 8.82e-01
Downregulation-of-SMAD2/3:SMAD4-transcriptional-activity 23 6.01e-03 3.47e-02 0.2500 0.2480 0.028000 3.95e-02 8.17e-01
Synthesis-of-active-ubiquitin:-roles-of-E1-and-E2-enzymes 29 3.25e-03 2.07e-02 0.2250 -0.0147 -0.225000 8.91e-01 3.62e-02
Triglyceride-catabolism 15 9.29e-06 1.75e-04 0.8680 -0.5030 -0.708000 7.41e-04 2.07e-06
Ubiquitin-Mediated-Degradation-of-Phosphorylated-Cdc25A 48 2.72e-05 4.30e-04 0.3390 -0.3150 -0.127000 1.64e-04 1.29e-01
p53-Independent-DNA-Damage-Response 48 2.72e-05 4.30e-04 0.3390 -0.3150 -0.127000 1.64e-04 1.29e-01
p53-Independent-G1/S-DNA-damage-checkpoint 48 2.72e-05 4.30e-04 0.3390 -0.3150 -0.127000 1.64e-04 1.29e-01
Assembly-of-the-pre-replicative-complex 64 6.67e-05 9.17e-04 0.1860 -0.1860 -0.000335 9.99e-03 9.96e-01
Regulation-of-ornithine-decarboxylase-(ODC) 46 3.97e-05 5.96e-04 0.3470 -0.3200 -0.135000 1.73e-04 1.13e-01
Autodegradation-of-the-E3-ubiquitin-ligase-COP1 47 7.41e-05 9.77e-04 0.3150 -0.2950 -0.110000 4.69e-04 1.92e-01
Heparan-sulfate/heparin-(HS-GAG)-metabolism 42 1.75e-07 4.23e-06 0.5510 0.4710 0.287000 1.31e-07 1.31e-03
Endosomal-Sorting-Complex-Required-For-Transport-(ESCRT) 30 7.64e-03 4.20e-02 0.2290 0.2250 0.041200 3.28e-02 6.96e-01
Post-NMDA-receptor-activation-events 50 1.31e-03 9.94e-03 0.1360 0.1220 -0.060900 1.36e-01 4.56e-01
RAB-geranylgeranylation 51 1.00e-03 8.01e-03 0.1480 0.1420 -0.041000 8.01e-02 6.13e-01
DNA-Replication-Pre-Initiation 80 2.28e-05 3.89e-04 0.1460 -0.1390 0.042600 3.15e-02 5.10e-01
Stabilization-of-p53 51 7.50e-05 9.79e-04 0.2910 -0.2760 -0.094000 6.62e-04 2.46e-01
Smooth-Muscle-Contraction 31 9.21e-03 4.83e-02 0.2130 0.0314 0.211000 7.62e-01 4.21e-02
Activation-of-the-pre-replicative-complex 32 5.28e-03 3.18e-02 0.2470 0.0599 0.239000 5.58e-01 1.91e-02
Ubiquitin-dependent-degradation-of-Cyclin-D 48 1.72e-04 1.90e-03 0.2880 -0.2720 -0.093600 1.11e-03 2.62e-01
Regulation-of-activated-PAK-2p34-by-proteasome-mediated-degradation 46 6.86e-05 9.33e-04 0.3430 -0.3150 -0.137000 2.24e-04 1.08e-01
Protein-ubiquitination 62 3.31e-04 3.24e-03 0.1560 0.0222 -0.154000 7.62e-01 3.60e-02
TNFs-bind-their-physiological-receptors 12 6.81e-03 3.84e-02 0.6090 0.3340 0.509000 4.52e-02 2.25e-03
AUF1-(hnRNP-D0)-binds-and-destabilizes-mRNA 50 9.96e-05 1.22e-03 0.3080 -0.2860 -0.113000 4.63e-04 1.68e-01
Orc1-removal-from-chromatin 66 9.92e-05 1.22e-03 0.2030 -0.2010 -0.027600 4.76e-03 6.98e-01
CDT1-association-with-the-CDC6:ORC:origin-complex 55 2.89e-05 4.51e-04 0.3200 -0.2960 -0.123000 1.49e-04 1.16e-01
Cross-presentation-of-soluble-exogenous-antigens-(endosomes) 44 5.19e-04 4.61e-03 0.2890 -0.2710 -0.100000 1.86e-03 2.50e-01
Intra-Golgi-traffic 41 5.73e-03 3.32e-02 0.1680 0.1680 -0.002910 6.30e-02 9.74e-01
Regulation-of-Apoptosis 49 1.45e-05 2.61e-04 0.3900 -0.3470 -0.177000 2.60e-05 3.17e-02
Vpu-mediated-degradation-of-CD4 48 5.10e-05 7.25e-04 0.3580 -0.3230 -0.154000 1.09e-04 6.44e-02
Degradation-of-AXIN 51 2.92e-04 2.94e-03 0.2760 -0.2590 -0.093300 1.36e-03 2.49e-01
Vif-mediated-degradation-of-APOBEC3G 48 3.71e-05 5.65e-04 0.3760 -0.3350 -0.170000 5.91e-05 4.14e-02
Class-I-peroxisomal-membrane-protein-import 19 1.70e-04 1.90e-03 0.6600 -0.3770 -0.542000 4.41e-03 4.30e-05
Negative-regulation-of-NOTCH4-signaling 51 1.22e-04 1.47e-03 0.3180 -0.2910 -0.128000 3.29e-04 1.14e-01
SCF-beta-TrCP-mediated-degradation-of-Emi1 51 8.26e-05 1.06e-03 0.3350 -0.3030 -0.142000 1.81e-04 8.02e-02
DARPP-32-events 22 7.90e-03 4.31e-02 0.3950 -0.1870 -0.348000 1.29e-01 4.75e-03
Regulation-of-RUNX3-expression-and-activity 52 2.51e-03 1.65e-02 0.1770 -0.1760 -0.016500 2.83e-02 8.37e-01
Biosynthesis-of-the-N-glycan-precursor-(dolichol-lipid-linked-oligosaccharide,-LLO)-and-transfer-to-a-nascent-protein 69 6.68e-04 5.77e-03 0.1430 0.1420 -0.017200 4.15e-02 8.04e-01
The-role-of-GTSE1-in-G2/M-progression-after-G2-checkpoint 55 1.73e-03 1.27e-02 0.1790 -0.1780 -0.019000 2.23e-02 8.08e-01
Transcriptional-activity-of-SMAD2/SMAD3:SMAD4-heterotrimer 43 1.40e-03 1.06e-02 0.2790 0.2600 0.102000 3.18e-03 2.50e-01
MET-promotes-cell-motility 27 4.01e-05 5.96e-04 0.5880 0.4880 0.329000 1.16e-05 3.08e-03
FBXL7-down-regulates-AURKA-during-mitotic-entry-and-in-early-mitosis 51 1.71e-04 1.90e-03 0.3180 -0.2890 -0.132000 3.60e-04 1.04e-01
Degradation-of-the-extracellular-matrix 74 5.69e-11 2.49e-09 0.5310 0.4450 0.289000 3.56e-11 1.80e-05
Regulation-of-RUNX2-expression-and-activity 66 1.43e-04 1.68e-03 0.2460 -0.2330 -0.077900 1.08e-03 2.74e-01
Metabolism-of-polyamines 53 1.43e-03 1.08e-02 0.2210 -0.2130 -0.058600 7.45e-03 4.61e-01
RUNX1-regulates-transcription-of-genes-involved-in-differentiation-of-HSCs 64 3.53e-04 3.37e-03 0.2300 -0.2190 -0.068000 2.40e-03 3.47e-01
ER-Phagosome-pathway 73 5.67e-04 4.97e-03 0.1700 -0.1690 -0.019800 1.25e-02 7.70e-01
p53-Dependent-G1-DNA-Damage-Response 59 9.94e-04 8.00e-03 0.2190 -0.2100 -0.061400 5.29e-03 4.15e-01
p53-Dependent-G1/S-DNA-damage-checkpoint 59 9.94e-04 8.00e-03 0.2190 -0.2100 -0.061400 5.29e-03 4.15e-01
Hh-mutants-abrogate-ligand-secretion 53 3.99e-04 3.74e-03 0.2920 -0.2670 -0.119000 7.77e-04 1.34e-01
Transport-to-the-Golgi-and-subsequent-modification 145 2.99e-06 5.79e-05 0.1160 0.1100 -0.037900 2.23e-02 4.32e-01
Synthesis-of-substrates-in-N-glycan-biosythesis 56 3.48e-03 2.19e-02 0.1720 0.1710 0.023000 2.73e-02 7.66e-01
COPI-dependent-Golgi-to-ER-retrograde-traffic 74 1.18e-06 2.61e-05 0.3620 0.3190 0.171000 2.15e-06 1.09e-02
Intra-Golgi-and-retrograde-Golgi-to-ER-traffic 168 7.64e-10 2.71e-08 0.2450 0.2300 0.083100 2.68e-07 6.36e-02
Peptide-ligand-binding-receptors 57 5.45e-03 3.23e-02 0.1370 0.1360 -0.010600 7.50e-02 8.90e-01
DNA-strand-elongation 31 8.91e-03 4.73e-02 0.3050 0.1300 0.276000 2.12e-01 7.85e-03
Regulation-of-RAS-by-GAPs 63 1.17e-03 9.04e-03 0.1980 -0.1930 -0.047000 8.17e-03 5.19e-01
COPII-mediated-vesicle-transport 58 7.93e-03 4.31e-02 0.1100 0.0438 -0.101000 5.65e-01 1.85e-01
Peroxisomal-lipid-metabolism 22 3.71e-05 5.65e-04 0.6870 -0.4090 -0.552000 9.02e-04 7.27e-06
Activation-of-NF-kappaB-in-B-cells 62 1.68e-03 1.25e-02 0.1960 -0.1900 -0.047500 9.72e-03 5.18e-01
NIK-->noncanonical-NF-kB-signaling 55 5.97e-04 5.19e-03 0.2800 -0.2560 -0.115000 1.03e-03 1.41e-01
G1/S-DNA-Damage-Checkpoints 61 1.77e-03 1.29e-02 0.2050 -0.1970 -0.056600 7.84e-03 4.45e-01
Hh-mutants-that-don't-undergo-autocatalytic-processing-are-degraded-by-ERAD 51 4.47e-04 4.11e-03 0.3170 -0.2830 -0.143000 4.82e-04 7.68e-02
Regulation-of-PTEN-gene-transcription 59 4.45e-03 2.74e-02 0.1740 -0.0331 -0.171000 6.61e-01 2.33e-02
Degradation-of-GLI1-by-the-proteasome 55 1.82e-04 1.99e-03 0.3310 -0.2920 -0.155000 1.78e-04 4.67e-02
Dectin-1-mediated-noncanonical-NF-kB-signaling 56 1.08e-03 8.56e-03 0.2610 -0.2400 -0.103000 1.94e-03 1.84e-01
Asparagine-N-linked-glycosylation 251 7.80e-09 2.56e-07 0.1140 0.1110 -0.024500 2.51e-03 5.05e-01
Degradation-of-DVL 52 2.99e-04 2.99e-03 0.3330 -0.2930 -0.158000 2.56e-04 4.90e-02
SCF(Skp2)-mediated-degradation-of-p27/p21 57 2.76e-03 1.79e-02 0.2180 -0.2060 -0.071200 7.12e-03 3.53e-01
HCMV-Infection 80 2.50e-03 1.65e-02 0.1150 0.1130 -0.021700 8.02e-02 7.37e-01
MET-activates-PTK2-signaling 17 1.25e-04 1.50e-03 0.7490 0.5930 0.458000 2.33e-05 1.08e-03
G2/M-Checkpoints 125 1.43e-04 1.68e-03 0.0952 -0.0653 0.069200 2.08e-01 1.82e-01
UCH-proteinases 80 9.06e-04 7.42e-03 0.1780 -0.1730 -0.040700 7.49e-03 5.30e-01
Hedgehog-ligand-biogenesis 56 2.45e-03 1.64e-02 0.2370 -0.2200 -0.087700 4.49e-03 2.56e-01
Peroxisomal-protein-import 53 2.97e-12 1.52e-10 0.7290 -0.4460 -0.577000 1.95e-08 3.55e-13
ABC-transporter-disorders 66 7.84e-05 1.01e-03 0.3220 -0.2830 -0.155000 7.23e-05 2.99e-02
Glutamate-Neurotransmitter-Release-Cycle 18 7.24e-03 4.01e-02 0.5110 0.2920 0.420000 3.19e-02 2.05e-03
Senescence-Associated-Secretory-Phenotype-(SASP) 45 5.00e-03 3.03e-02 0.2720 0.2450 0.118000 4.48e-03 1.71e-01
Regulation-of-PTEN-stability-and-activity 65 3.58e-04 3.39e-03 0.2830 -0.2530 -0.127000 4.21e-04 7.71e-02
Signaling-by-TGF-beta-Receptor-Complex 71 2.37e-03 1.60e-02 0.1940 0.1840 0.060200 7.28e-03 3.81e-01
Defective-CFTR-causes-cystic-fibrosis 55 4.89e-04 4.38e-03 0.3200 -0.2800 -0.156000 3.33e-04 4.53e-02
Degradation-of-GLI2-by-the-proteasome 55 1.02e-03 8.12e-03 0.2960 -0.2610 -0.139000 8.06e-04 7.55e-02
Defective-B4GALT7-causes-EDS,-progeroid-type 16 5.72e-03 3.32e-02 0.5710 0.4600 0.338000 1.44e-03 1.94e-02
O-linked-glycosylation 74 6.33e-07 1.45e-05 0.4120 0.3460 0.224000 2.66e-07 8.88e-04
Crosslinking-of-collagen-fibrils 10 8.72e-04 7.29e-03 0.8870 0.6850 0.563000 1.75e-04 2.06e-03
Carnitine-metabolism 12 1.61e-03 1.21e-02 0.7640 -0.4760 -0.598000 4.31e-03 3.37e-04
GLI3-is-processed-to-GLI3R-by-the-proteasome 55 9.59e-04 7.81e-03 0.3000 -0.2640 -0.143000 7.06e-04 6.74e-02
Golgi-to-ER-retrograde-transport 105 1.65e-06 3.35e-05 0.3020 0.2660 0.144000 2.62e-06 1.07e-02
Interleukin-4-and-Interleukin-13-signaling 76 5.17e-05 7.26e-04 0.3100 0.2710 0.151000 4.48e-05 2.30e-02
A-tetrasaccharide-linker-sequence-is-required-for-GAG-synthesis 21 1.81e-03 1.31e-02 0.5500 0.4440 0.324000 4.28e-04 1.01e-02
Triglyceride-metabolism 22 6.65e-05 9.17e-04 0.6840 -0.4200 -0.539000 6.50e-04 1.19e-05
Synthesis-of-PIPs-at-the-plasma-membrane 51 3.76e-03 2.34e-02 0.2720 0.2420 0.124000 2.84e-03 1.25e-01
Signaling-by-MET 60 2.20e-04 2.31e-03 0.3340 0.2870 0.170000 1.19e-04 2.28e-02
Laminin-interactions 22 5.04e-05 7.24e-04 0.6980 0.5480 0.433000 8.72e-06 4.33e-04
ER-to-Golgi-Anterograde-Transport 120 2.34e-03 1.60e-02 0.0803 0.0551 -0.058500 2.98e-01 2.69e-01
Formation-of-Incision-Complex-in-GG-NER 43 6.52e-03 3.71e-02 0.2960 -0.1450 -0.258000 9.92e-02 3.44e-03
Activation-of-SMO 15 6.16e-03 3.52e-02 0.5970 0.3620 0.474000 1.52e-02 1.47e-03
Signaling-by-the-B-Cell-Receptor-(BCR) 103 2.88e-03 1.86e-02 0.1240 -0.1240 -0.011700 3.00e-02 8.37e-01
Oxygen-dependent-proline-hydroxylation-of-Hypoxia-inducible-Factor-Alpha 60 4.60e-04 4.17e-03 0.3230 -0.2760 -0.167000 2.17e-04 2.57e-02
Defective-B3GAT3-causes-JDSSDHD 16 5.53e-03 3.25e-02 0.5860 0.4640 0.357000 1.30e-03 1.34e-02
Potassium-Channels 56 2.20e-03 1.51e-02 0.2890 -0.2510 -0.144000 1.17e-03 6.24e-02
Collagen-degradation 26 1.57e-04 1.78e-03 0.6000 0.4730 0.368000 2.93e-05 1.17e-03
Defective-B3GALT6-causes-EDSP2-and-SEMDJL1 16 2.19e-03 1.51e-02 0.6440 0.5050 0.400000 4.69e-04 5.66e-03
Regulation-of-mRNA-stability-by-proteins-that-bind-AU-rich-elements 83 3.05e-03 1.95e-02 0.1980 -0.1820 -0.078200 4.26e-03 2.19e-01
Signaling-by-TGF-beta-family-members 88 1.19e-03 9.19e-03 0.2220 0.1990 0.098100 1.25e-03 1.12e-01
p130Cas-linkage-to-MAPK-signaling-for-integrins 14 1.95e-03 1.38e-02 0.7040 0.5450 0.446000 4.11e-04 3.88e-03
APC/C:Cdc20-mediated-degradation-of-Securin 62 6.76e-03 3.83e-02 0.2360 -0.2090 -0.109000 4.50e-03 1.37e-01
Cellular-response-to-hypoxia 68 8.97e-04 7.40e-03 0.2900 -0.2480 -0.150000 4.10e-04 3.31e-02
Interferon-gamma-signaling 58 7.00e-03 3.91e-02 0.2500 0.1210 0.219000 1.12e-01 3.95e-03
Downstream-TCR-signaling 77 5.45e-03 3.23e-02 0.2040 -0.1850 -0.087400 5.10e-03 1.85e-01
Signaling-by-NOTCH4 78 4.53e-03 2.78e-02 0.2100 -0.1890 -0.092300 3.95e-03 1.59e-01
FCERI-mediated-NF-kB-activation 73 1.92e-03 1.38e-02 0.2570 -0.2230 -0.129000 1.01e-03 5.75e-02
ABC-family-proteins-mediated-transport 89 1.75e-05 3.10e-04 0.3340 -0.2790 -0.185000 5.62e-06 2.63e-03
tRNA-processing-in-the-mitochondrion 18 3.43e-09 1.18e-07 1.1300 -0.7500 -0.842000 3.52e-08 6.26e-10
Glycosaminoglycan-metabolism 99 1.18e-12 6.29e-11 0.5510 0.4310 0.343000 1.26e-13 3.57e-09
Prolactin-receptor-signaling 11 5.73e-03 3.32e-02 0.7310 -0.4720 -0.559000 6.73e-03 1.34e-03
Membrane-Trafficking 530 1.50e-08 4.57e-07 0.1050 0.1030 0.017500 5.05e-05 4.93e-01
Metabolism-of-carbohydrates 237 3.16e-04 3.13e-03 0.1040 0.1020 0.017100 6.78e-03 6.50e-01
Diseases-of-glycosylation 113 1.33e-06 2.82e-05 0.3390 0.2780 0.193000 3.33e-07 3.94e-04
Chondroitin-sulfate/dermatan-sulfate-metabolism 42 1.03e-08 3.30e-07 0.7070 0.5400 0.456000 1.42e-09 3.11e-07
Interferon-Signaling 141 9.06e-03 4.77e-02 0.1080 0.0235 0.106000 6.31e-01 3.03e-02
Defects-in-vitamin-and-cofactor-metabolism 20 1.95e-04 2.08e-03 0.6990 -0.4520 -0.533000 4.61e-04 3.72e-05
Metabolism-of-porphyrins 19 5.53e-03 3.25e-02 0.5510 -0.3480 -0.427000 8.69e-03 1.26e-03
Pink/Parkin-Mediated-Mitophagy 20 1.23e-03 9.40e-03 0.6160 -0.4730 -0.394000 2.54e-04 2.26e-03
Vesicle-mediated-transport 560 1.04e-07 2.77e-06 0.1020 0.0998 0.022400 5.99e-05 3.68e-01
Sphingolipid-metabolism 67 6.93e-03 3.89e-02 0.2540 0.2140 0.137000 2.45e-03 5.24e-02
tRNA-Aminoacylation 26 4.87e-08 1.35e-06 0.8700 -0.6520 -0.576000 8.49e-09 3.70e-07
Mitochondrial-protein-import 57 8.67e-23 8.53e-21 1.0300 -0.7620 -0.686000 2.29e-23 2.95e-19
Glucose-metabolism 79 1.57e-04 1.78e-03 0.3330 -0.1950 -0.270000 2.73e-03 3.44e-05
EPH-Ephrin-signaling 82 2.92e-04 2.94e-03 0.3120 0.2540 0.180000 6.99e-05 4.81e-03
Diseases-associated-with-glycosaminoglycan-metabolism 34 7.91e-06 1.51e-04 0.6280 0.4790 0.406000 1.31e-06 4.26e-05
Deubiquitination 220 8.02e-03 4.35e-02 0.0625 -0.0613 0.012100 1.18e-01 7.58e-01
Intraflagellar-transport 36 1.85e-03 1.33e-02 0.4350 0.3420 0.269000 3.92e-04 5.28e-03
Mitochondrial-translation-initiation 88 1.35e-40 2.16e-38 1.1100 -0.8210 -0.750000 1.25e-40 4.30e-34
ECM-proteoglycans 43 3.42e-13 1.90e-11 0.8860 0.6610 0.590000 6.20e-14 2.23e-11
CS/DS-degradation 11 3.22e-04 3.17e-03 0.9280 0.6200 0.691000 3.74e-04 7.28e-05
rRNA-processing-in-the-mitochondrion 22 1.56e-11 7.41e-10 1.1600 -0.7830 -0.854000 2.00e-10 3.93e-12
Pyruvate-metabolism 27 5.41e-08 1.47e-06 0.8530 -0.5670 -0.637000 3.40e-07 9.95e-09
Gluconeogenesis 26 9.45e-05 1.18e-03 0.6400 -0.4170 -0.486000 2.36e-04 1.78e-05
Mitochondrial-translation-elongation 88 2.90e-41 6.18e-39 1.1200 -0.8270 -0.758000 3.38e-41 8.11e-35
Mitochondrial-translation-termination 88 4.51e-41 8.23e-39 1.1200 -0.8250 -0.756000 5.15e-41 1.18e-34
Assembly-of-collagen-fibrils-and-other-multimeric-structures 46 8.17e-11 3.17e-09 0.7690 0.5760 0.509000 1.34e-11 2.38e-09
Mitochondrial-translation 94 6.95e-44 1.78e-41 1.1200 -0.8250 -0.758000 1.11e-43 4.24e-37
Platelet-degranulation 108 9.24e-05 1.17e-03 0.2960 0.2380 0.175000 1.91e-05 1.69e-03
O-glycosylation-of-TSR-domain-containing-proteins 33 1.99e-04 2.10e-03 0.5440 0.4140 0.352000 3.79e-05 4.70e-04
Signaling-by-Retinoic-Acid 32 1.88e-03 1.35e-02 0.4700 -0.3000 -0.362000 3.36e-03 3.98e-04
Regulation-of-pyruvate-dehydrogenase-(PDH)-complex 15 2.55e-05 4.24e-04 0.9140 -0.6150 -0.676000 3.77e-05 5.76e-06
Mitotic-Prometaphase 174 1.97e-03 1.39e-02 0.1680 0.1450 0.084200 1.00e-03 5.59e-02
Fatty-acid-metabolism 131 2.54e-11 1.16e-09 0.4600 -0.2940 -0.353000 6.46e-09 2.95e-12
Regulation-of-lipid-metabolism-by-PPARalpha 111 1.88e-04 2.04e-03 0.2820 -0.1680 -0.226000 2.28e-03 3.88e-05
mTOR-signalling 37 4.57e-03 2.78e-02 0.4030 -0.2540 -0.312000 7.41e-03 1.03e-03
Autophagy 110 8.95e-03 4.73e-02 0.1960 -0.1080 -0.164000 5.14e-02 2.97e-03
PPARA-activates-gene-expression 109 1.93e-04 2.08e-03 0.2860 -0.1720 -0.228000 1.94e-03 3.85e-05
Metabolism-of-lipids 575 1.26e-10 4.72e-09 0.1910 -0.1040 -0.160000 2.19e-05 7.10e-11
Macroautophagy 99 4.33e-03 2.67e-02 0.2320 -0.1340 -0.189000 2.17e-02 1.16e-03
Non-integrin-membrane-ECM-interactions 41 1.74e-06 3.49e-05 0.6150 0.4610 0.406000 3.18e-07 6.74e-06
mTORC1-mediated-signalling 20 5.39e-03 3.22e-02 0.5500 -0.3610 -0.415000 5.17e-03 1.30e-03
Post-translational-protein-modification 1122 8.61e-07 1.93e-05 0.0627 0.0621 0.008380 5.27e-04 6.40e-01
Transcriptional-activation-of-mitochondrial-biogenesis 51 3.86e-08 1.10e-06 0.6280 -0.4180 -0.468000 2.43e-07 7.23e-09
Signaling-by-Receptor-Tyrosine-Kinases 390 1.34e-06 2.82e-05 0.1790 0.1490 0.099200 4.50e-07 8.10e-04
Metabolism-of-proteins 1577 1.20e-07 3.14e-06 0.0624 -0.0131 -0.061000 3.93e-01 7.33e-05
Keratan-sulfate/keratin-metabolism 27 3.04e-03 1.95e-02 0.5000 0.3760 0.329000 7.15e-04 3.07e-03
Respiratory-electron-transport,-ATP-synthesis-by-chemiosmotic-coupling,-and-heat-production-by-uncoupling-proteins. 120 4.61e-65 2.95e-62 1.2200 -0.8830 -0.836000 5.28e-63 1.12e-56
Defective-B3GALTL-causes-Peters-plus-syndrome-(PpS) 32 4.00e-04 3.74e-03 0.5350 0.4010 0.355000 8.77e-05 5.08e-04
Respiratory-electron-transport 100 4.63e-57 1.97e-54 1.2500 -0.9040 -0.859000 2.80e-55 4.76e-50
Mitochondrial-tRNA-aminoacylation 19 3.66e-08 1.06e-06 1.0400 -0.7560 -0.712000 1.14e-08 7.59e-08
Cristae-formation 29 4.27e-17 3.22e-15 1.2500 -0.9050 -0.861000 3.21e-17 9.79e-16
Cilium-Assembly 176 4.78e-05 6.95e-04 0.2470 0.1950 0.152000 8.38e-06 5.08e-04
Keratan-sulfate-degradation 10 6.99e-04 5.96e-03 0.9320 0.6800 0.638000 1.95e-04 4.80e-04
Fcgamma-receptor-(FCGR)-dependent-phagocytosis 82 3.49e-04 3.35e-03 0.3320 0.2130 0.255000 8.87e-04 6.69e-05
Extracellular-matrix-organization 228 1.35e-38 1.92e-36 0.6770 0.4990 0.458000 1.41e-38 1.08e-32
Response-to-elevated-platelet-cytosolic-Ca2+ 113 1.45e-04 1.69e-03 0.2960 0.2290 0.188000 2.63e-05 5.63e-04
Regulation-of-Insulin-like-Growth-Factor-(IGF)-transport-and-uptake-by-Insulin-like-Growth-Factor-Binding-Proteins-(IGFBPs) 84 4.05e-09 1.36e-07 0.5210 0.3890 0.347000 7.59e-10 3.74e-08
Disease 881 8.96e-04 7.40e-03 0.0553 0.0538 0.012800 7.31e-03 5.24e-01
Defects-in-cobalamin-(B12)-metabolism 12 1.10e-03 8.65e-03 0.8230 -0.5620 -0.602000 7.53e-04 3.04e-04
Kinesins 35 8.36e-04 7.04e-03 0.4880 0.3640 0.325000 1.92e-04 8.91e-04
Molecules-associated-with-elastic-fibres 28 1.45e-06 2.98e-05 0.7580 0.5160 0.554000 2.25e-06 3.82e-07
Post-translational-protein-phosphorylation 77 2.65e-08 7.88e-07 0.5180 0.3850 0.348000 5.49e-09 1.34e-07
Pyruvate-metabolism-and-Citric-Acid-(TCA)-cycle 51 4.48e-21 4.10e-19 1.0500 -0.7250 -0.760000 3.15e-19 5.37e-21
Mitophagy 27 4.58e-04 4.17e-03 0.5820 -0.4290 -0.394000 1.16e-04 3.92e-04
Mitochondrial-iron-sulfur-cluster-biogenesis 10 6.99e-05 9.35e-04 1.0700 -0.7410 -0.775000 4.95e-05 2.19e-05
Cobalamin-(Cbl,-vitamin-B12)-transport-and-metabolism 13 8.93e-03 4.73e-02 0.6590 -0.4500 -0.481000 4.98e-03 2.66e-03
EPHB-mediated-forward-signaling 32 2.71e-03 1.77e-02 0.4690 0.3460 0.316000 7.13e-04 1.97e-03
Sulfur-amino-acid-metabolism 20 3.47e-04 3.35e-03 0.6910 -0.4750 -0.502000 2.39e-04 1.00e-04
RNA-Polymerase-II-Transcription 957 2.44e-03 1.64e-02 0.0699 -0.0337 -0.061200 8.07e-02 1.51e-03
Gene-expression-(Transcription) 1076 2.07e-03 1.45e-02 0.0654 -0.0304 -0.057800 9.59e-02 1.55e-03
Complex-I-biogenesis 54 1.62e-33 2.07e-31 1.3000 -0.9300 -0.904000 2.28e-32 1.25e-30
Mitochondrial-biogenesis 88 1.70e-19 1.45e-17 0.7690 -0.5300 -0.557000 7.78e-18 1.67e-19
Metabolism-of-water-soluble-vitamins-and-cofactors 103 3.97e-03 2.46e-02 0.2500 -0.1630 -0.189000 4.25e-03 9.27e-04
Heme-biosynthesis 12 5.39e-04 4.76e-03 0.8680 -0.6010 -0.627000 3.12e-04 1.70e-04
Protein-localization 142 7.41e-29 7.90e-27 0.7420 -0.5120 -0.537000 6.06e-26 2.04e-28
Metabolism 1613 5.51e-49 1.76e-46 0.3000 -0.2000 -0.224000 1.76e-39 2.43e-49
Signaling-by-PDGF 48 6.72e-04 5.77e-03 0.4260 0.3130 0.289000 1.75e-04 5.29e-04
Signal-Transduction 1697 3.11e-13 1.81e-11 0.1440 0.1130 0.089900 3.26e-14 1.55e-09
The-citric-acid-(TCA)-cycle-and-respiratory-electron-transport 167 1.25e-82 1.60e-79 1.1700 -0.8350 -0.813000 5.14e-78 5.46e-74
Metabolism-of-cofactors 18 6.03e-07 1.40e-05 0.9790 -0.7030 -0.681000 2.41e-07 5.56e-07
Platelet-activation,-signaling-and-aggregation 214 2.24e-04 2.33e-03 0.2150 0.1620 0.141000 4.52e-05 3.93e-04
Hemostasis 440 2.40e-06 4.72e-05 0.1870 0.1420 0.121000 3.95e-07 1.39e-05
Chondroitin-sulfate-biosynthesis 16 4.32e-05 6.35e-04 0.8700 0.6250 0.605000 1.52e-05 2.75e-05
Collagen-biosynthesis-and-modifying-enzymes 56 1.44e-17 1.15e-15 0.9140 0.6370 0.655000 1.59e-16 2.10e-17
Metabolism-of-vitamins-and-cofactors 153 2.20e-03 1.51e-02 0.2180 -0.1450 -0.163000 2.06e-03 5.27e-04
Signaling-by-Rho-GTPases 340 1.22e-06 2.65e-05 0.2190 0.1460 0.164000 3.89e-06 2.40e-07
Transport-of-small-molecules 492 7.64e-03 4.20e-02 0.1070 -0.0672 -0.082600 1.11e-02 1.80e-03
Syndecan-interactions 20 7.01e-05 9.35e-04 0.7590 0.5440 0.529000 2.50e-05 4.16e-05
Cytokine-Signaling-in-Immune-system 610 7.31e-04 6.19e-03 0.1180 0.0757 0.090600 1.52e-03 1.46e-04
Mitochondrial-calcium-ion-transport 21 1.53e-04 1.76e-03 0.7100 -0.4950 -0.509000 8.64e-05 5.32e-05
Formation-of-ATP-by-chemiosmotic-coupling 16 1.29e-10 4.72e-09 1.3100 -0.9330 -0.919000 1.02e-10 1.89e-10
Transcriptional-Regulation-by-TP53 334 6.12e-03 3.51e-02 0.1350 -0.1010 -0.088400 1.50e-03 5.66e-03
Immune-System 1477 5.03e-07 1.19e-05 0.1120 0.0850 0.072600 7.86e-08 4.51e-06
Branched-chain-amino-acid-catabolism 19 5.85e-11 2.49e-09 1.2200 -0.8590 -0.871000 9.04e-11 4.89e-11
Synthesis-of-PA 27 8.76e-03 4.70e-02 0.4600 -0.3310 -0.319000 2.91e-03 4.10e-03
Translation 241 4.00e-31 4.66e-29 0.5950 -0.4150 -0.426000 1.35e-28 4.55e-30
RHO-GTPase-Effectors 220 2.69e-05 4.30e-04 0.2410 0.1650 0.175000 2.50e-05 7.61e-06
Metabolism-of-amino-acids-and-derivatives 256 1.02e-11 5.03e-10 0.3470 -0.2410 -0.251000 3.75e-11 5.47e-12
mRNA-Splicing---Major-Pathway 172 1.87e-05 3.27e-04 0.2770 -0.1910 -0.201000 1.53e-05 5.88e-06
Integrin-cell-surface-interactions 53 1.23e-07 3.14e-06 0.6020 0.4300 0.421000 5.95e-08 1.12e-07
Mitochondrial-Fatty-Acid-Beta-Oxidation 31 5.13e-17 3.65e-15 1.2100 -0.8580 -0.850000 1.25e-16 2.49e-16
Diseases-associated-with-O-glycosylation-of-proteins 46 3.63e-03 2.28e-02 0.3840 0.2760 0.268000 1.23e-03 1.70e-03
Cellular-responses-to-stress 435 8.10e-03 4.37e-02 0.1160 -0.0786 -0.085800 5.16e-03 2.26e-03
Metabolism-of-RNA 619 1.46e-07 3.67e-06 0.1780 -0.1290 -0.123000 4.75e-08 2.26e-07
Citric-acid-cycle-(TCA-cycle) 22 2.51e-13 1.53e-11 1.2600 -0.8940 -0.889000 3.71e-13 5.02e-13
Innate-Immune-System 746 7.02e-03 3.91e-02 0.0913 0.0670 0.062100 2.01e-03 4.21e-03
Processing-of-Capped-Intron-Containing-Pre-mRNA 230 1.11e-05 2.06e-04 0.2460 -0.1720 -0.177000 7.62e-06 4.18e-06
Collagen-formation 75 1.22e-16 8.24e-15 0.7690 0.5460 0.542000 3.06e-16 4.96e-16
Glyoxylate-metabolism-and-glycine-degradation 25 7.78e-11 3.12e-09 1.0600 -0.7510 -0.748000 7.74e-11 9.53e-11
Collagen-chain-trimerization 33 1.12e-13 7.15e-12 1.0400 0.7370 0.740000 2.34e-13 1.79e-13
Neddylation 210 2.19e-03 1.51e-02 0.1890 -0.1350 -0.132000 7.60e-04 1.01e-03
Regulation-of-actin-dynamics-for-phagocytic-cup-formation 59 2.59e-03 1.70e-02 0.3500 0.2460 0.249000 1.10e-03 9.59e-04
TP53-Regulates-Metabolic-Genes 85 1.59e-07 3.92e-06 0.4720 -0.3350 -0.333000 9.34e-08 1.13e-07
Glycerophospholipid-biosynthesis 102 1.98e-05 3.42e-04 0.3590 -0.2530 -0.255000 1.02e-05 8.93e-06
NCAM1-interactions 30 8.78e-03 4.70e-02 0.4370 0.3080 0.310000 3.50e-03 3.34e-03
mRNA-Splicing 180 2.48e-05 4.17e-04 0.2680 -0.1900 -0.189000 1.16e-05 1.20e-05
Elastic-fibre-formation 38 7.80e-11 3.12e-09 0.8600 0.6080 0.608000 8.52e-11 8.68e-11
tRNA-processing 116 2.53e-04 2.59e-03 0.2950 -0.2080 -0.208000 1.08e-04 1.08e-04



Detailed Gene set reports


Termination-of-O-glycan-biosynthesis

Termination-of-O-glycan-biosynthesis
metric value
setSize 10
pMANOVA 0.00112
p.adjustMANOVA 0.0087
s.dist 0.391
s.young 0.391
s.old -0.00526
p.young 0.0324
p.old 0.977




Top 20 genes
Gene young old
St3gal4 4466 -4957
St6galnac2 5684 -2059
St6gal1 4351 -2022
St6galnac3 48 -5018

Click HERE to show all gene set members

All member genes
young old
Muc15 6986 6914
Muc16 -1221 -3095
St3gal1 3058 716
St3gal2 6995 5852
St3gal3 -6777 -6624
St3gal4 4466 -4957
St6gal1 4351 -2022
St6galnac2 5684 -2059
St6galnac3 48 -5018
St6galnac4 6331 6062





Presynaptic-depolarization-and-calcium-channel-opening

Presynaptic-depolarization-and-calcium-channel-opening
metric value
setSize 10
pMANOVA 0.00206
p.adjustMANOVA 0.0145
s.dist 0.396
s.young 0.0225
s.old 0.395
p.young 0.902
p.old 0.0306




Top 20 genes
Gene young old
Cacnb1 7379 6564
Cacnb3 6991 5679
Cacna1e 3836 2997
Cacna2d1 2938 1584

Click HERE to show all gene set members

All member genes
young old
Cacfd1 -4976 -5163
Cacna1a -3426 5118
Cacna1e 3836 2997
Cacna2d1 2938 1584
Cacna2d2 -232 3850
Cacna2d3 -2618 5379
Cacnb1 7379 6564
Cacnb2 -5371 -6792
Cacnb3 6991 5679
Cacnb4 -1978 6296





Synaptic-adhesion-like-molecules

Synaptic-adhesion-like-molecules
metric value
setSize 15
pMANOVA 0.00173
p.adjustMANOVA 0.0127
s.dist 0.285
s.young 0.283
s.old -0.0347
p.young 0.0576
p.old 0.816




Top 20 genes
Gene young old
Lrfn3 2693 -2907
Ptprd 1609 -4417
Lrfn1 3108 -1921
Lrfn4 1425 -3569
Grin2c 791 -5559
Grin2d 5624 -588
Dlg1 1311 -1704

Click HERE to show all gene set members

All member genes
young old
Dlg1 1311 -1704
Dlg3 4869 4306
Dlg4 6131 5964
Flot1 -4409 -5145
Flot2 -2856 -1772
Gria3 7251 6760
Grin2c 791 -5559
Grin2d 5624 -588
Lrfn1 3108 -1921
Lrfn3 2693 -2907
Lrfn4 1425 -3569
Ptprd 1609 -4417
Ptprf 3330 5754
Ptprs 6547 183
Rtn3 -4548 -5017





Interferon-alpha/beta-signaling

Interferon-alpha/beta-signaling
metric value
setSize 40
pMANOVA 1.39e-08
p.adjustMANOVA 4.33e-07
s.dist 0.363
s.young 0.0479
s.old 0.36
p.young 0.601
p.old 8.18e-05




Top 20 genes
Gene young old
Irf5 6574 5961
Ip6k2 5972 5125
Irf8 6762 4110
Ifit2 4223 6292
Ifit3b 4145 5674
Oas3 4123 5233
Ptpn1 4586 4701
Egr1 6800 2934
Tyk2 3861 4516
Ifnar1 4856 3153
Mx1 2461 4874
Isg15 1534 5220
Socs1 1854 3043
Psmb8 188 2895
Irf2 20 1727

Click HERE to show all gene set members

All member genes
young old
Abce1 -693 -1645
Adar -1009 3485
Bst2 -4223 4477
Egr1 6800 2934
Ifi35 -3130 4433
Ifit2 4223 6292
Ifit3b 4145 5674
Ifnar1 4856 3153
Ifnar2 2104 -5943
Ip6k2 5972 5125
Irf1 -3783 -2366
Irf2 20 1727
Irf3 -2892 -808
Irf4 -4725 -5939
Irf5 6574 5961
Irf6 2842 -1207
Irf7 -70 6216
Irf8 6762 4110
Irf9 -611 5700
Isg15 1534 5220
Isg20 -1498 4375
Jak1 -2505 -6853
Mx1 2461 4874
Oas2 -1450 4847
Oas3 4123 5233
Oasl1 -8 5668
Psmb8 188 2895
Ptpn1 4586 4701
Ptpn11 -3358 -3525
Ptpn6 -2833 1877
Rnasel 4220 -1796
Rsad2 -6088 1479
Samhd1 -4358 -5556
Socs1 1854 3043
Socs3 2520 -1464
Stat1 -1595 3287
Stat2 -3094 5004
Tyk2 3861 4516
Usp18 -2557 6813
Xaf1 -1484 5451





The-canonical-retinoid-cycle-in-rods-(twilight-vision)

The-canonical-retinoid-cycle-in-rods-(twilight-vision)
metric value
setSize 12
pMANOVA 0.000409
p.adjustMANOVA 0.00379
s.dist 0.609
s.young 0.245
s.old 0.557
p.young 0.141
p.old 0.000831




Top 20 genes
Gene young old
Rbp1 7370 6838
Napepld 7118 6773
Rbp4 6701 6970
Rdh11 6388 6267
Dhrs9 4412 6006
Cyp4v3 1947 2922
Rdh5 2259 2260
Myo7a 372 5690

Click HERE to show all gene set members

All member genes
young old
Abca4 -6708 103
Cyp4v3 1947 2922
Dhrs9 4412 6006
Lrat -5855 -3045
Myo7a 372 5690
Napepld 7118 6773
Rbp1 7370 6838
Rbp4 6701 6970
Rdh10 1223 -2164
Rdh11 6388 6267
Rdh5 2259 2260
Ttr -2307 6470





N-glycan-antennae-elongation-in-the-medial/trans-Golgi

N-glycan-antennae-elongation-in-the-medial/trans-Golgi
metric value
setSize 20
pMANOVA 0.000241
p.adjustMANOVA 0.00249
s.dist 0.355
s.young 0.351
s.old 0.0531
p.young 0.00662
p.old 0.681




Top 20 genes
Gene young old
B4galt6 6036 6103
B4galt5 6407 5561
B4galt2 6315 4664
Chst10 4959 4476
St8sia2 4491 4888
Fuca1 5465 3412
Mgat2 5212 2395
Man2a1 2682 1662
B4galt1 3267 1068
Mgat4a 2446 753

Click HERE to show all gene set members

All member genes
young old
B4galt1 3267 1068
B4galt2 6315 4664
B4galt3 -4310 -1405
B4galt4 -4249 -652
B4galt5 6407 5561
B4galt6 6036 6103
Chst10 4959 4476
Fuca1 5465 3412
Fut8 5119 -1697
Man2a1 2682 1662
Man2a2 3550 -4096
Mgat2 5212 2395
Mgat3 4996 -6874
Mgat4a 2446 753
Mgat4b -4283 -4924
Mgat5 -1543 -3594
St3gal4 4466 -4957
St6gal1 4351 -2022
St8sia2 4491 4888
St8sia6 -1521 -4549





Chemokine-receptors-bind-chemokines

Chemokine-receptors-bind-chemokines
metric value
setSize 20
pMANOVA 0.0025
p.adjustMANOVA 0.0165
s.dist 0.303
s.young 0.299
s.old 0.0474
p.young 0.0205
p.old 0.714




Top 20 genes
Gene young old
Cxcr6 7346 5824
Cxcl10 6404 6503
Ackr4 7184 5570
Ackr2 6213 5741
Cxcl16 6525 4852
Cx3cl1 5319 4905
Cx3cr1 2594 4915
Ccr1 4784 1307
Ccr10 1614 1451
Xcr1 4390 72
Ccr5 126 20

Click HERE to show all gene set members

All member genes
young old
Ackr2 6213 5741
Ackr3 -5232 -1642
Ackr4 7184 5570
Ccl2 2195 -4721
Ccl7 3952 -5153
Ccr1 4784 1307
Ccr10 1614 1451
Ccr2 5608 -3576
Ccr5 126 20
Ccrl2 -5124 -6524
Cx3cl1 5319 4905
Cx3cr1 2594 4915
Cxcl10 6404 6503
Cxcl12 -2702 -7116
Cxcl16 6525 4852
Cxcl9 -5835 -4523
Cxcr4 -5386 -5393
Cxcr6 7346 5824
Ppbp 6229 -3145
Xcr1 4390 72





O-linked-glycosylation-of-mucins

O-linked-glycosylation-of-mucins
metric value
setSize 32
pMANOVA 1.25e-05
p.adjustMANOVA 0.000229
s.dist 0.411
s.young 0.386
s.old 0.141
p.young 0.000155
p.old 0.169




Top 20 genes
Gene young old
Muc15 6986 6914
B3gnt9 7252 6495
Gcnt1 6989 6668
Gcnt4 7114 6388
St3gal2 6995 5852
B3gnt2 6711 5903
St6galnac4 6331 6062
Galnt7 6155 6218
B4galt6 6036 6103
B4galt5 6407 5561
Galnt4 6322 3680
B3gnt8 3406 3537
Galnt10 2930 4030
Galnt2 5385 1538
B3gntl1 2489 2271
B3gnt5 4473 902
St3gal1 3058 716

Click HERE to show all gene set members

All member genes
young old
B3gnt2 6711 5903
B3gnt3 -5788 -6546
B3gnt5 4473 902
B3gnt8 3406 3537
B3gnt9 7252 6495
B3gntl1 2489 2271
B4galt5 6407 5561
B4galt6 6036 6103
C1galt1 -3822 -3973
C1galt1c1 -850 202
Galnt1 -866 -4743
Galnt10 2930 4030
Galnt11 -1695 -4085
Galnt15 -5397 -6655
Galnt16 6303 -4778
Galnt17 5038 -3051
Galnt18 41 -332
Galnt2 5385 1538
Galnt4 6322 3680
Galnt7 6155 6218
Gcnt1 6989 6668
Gcnt4 7114 6388
Muc15 6986 6914
Muc16 -1221 -3095
St3gal1 3058 716
St3gal2 6995 5852
St3gal3 -6777 -6624
St3gal4 4466 -4957
St6gal1 4351 -2022
St6galnac2 5684 -2059
St6galnac3 48 -5018
St6galnac4 6331 6062





HS-GAG-biosynthesis

HS-GAG-biosynthesis
metric value
setSize 23
pMANOVA 0.000116
p.adjustMANOVA 0.00141
s.dist 0.475
s.young 0.434
s.old 0.192
p.young 0.000313
p.old 0.112




Top 20 genes
Gene young old
Sdc2 7435 6631
Hs2st1 7325 6476
Ext1 6621 6756
Gpc6 6891 6273
Slc35d2 6737 5737
Sdc1 7061 4784
Hs6st1 6013 5322
Hs3st3a1 6472 4761
Hspg2 6535 3769
Sdc3 4012 3827
Ndst2 4415 2740
Ndst3 3651 3254

Click HERE to show all gene set members

All member genes
young old
Agrn -247 199
Ext1 6621 6756
Ext2 1986 -1619
Glce 179 -4014
Gpc1 -3801 -4293
Gpc3 2127 -5769
Gpc4 -3619 -6582
Gpc6 6891 6273
Hs2st1 7325 6476
Hs3st1 -493 -13
Hs3st3a1 6472 4761
Hs3st3b1 1722 -4410
Hs6st1 6013 5322
Hs6st2 2526 -4992
Hspg2 6535 3769
Ndst1 -1729 -4940
Ndst2 4415 2740
Ndst3 3651 3254
Sdc1 7061 4784
Sdc2 7435 6631
Sdc3 4012 3827
Sdc4 4355 -9
Slc35d2 6737 5737





WNT5A-dependent-internalization-of-FZD2,-FZD5-and-ROR2

WNT5A-dependent-internalization-of-FZD2,-FZD5-and-ROR2
metric value
setSize 13
pMANOVA 0.00529
p.adjustMANOVA 0.0318
s.dist 0.492
s.young 0.446
s.old 0.206
p.young 0.00533
p.old 0.198




Top 20 genes
Gene young old
Fzd2 7468 6862
Cltb 6447 5854
Ror2 5904 5574
Ap2b1 5061 4756
Ror1 5976 2939
Ap2s1 1934 322
Ap2m1 1964 309
Cltc 2485 6

Click HERE to show all gene set members

All member genes
young old
Ap2a1 4766 -1188
Ap2a2 1207 -4356
Ap2b1 5061 4756
Ap2m1 1964 309
Ap2s1 1934 322
Clta 2287 -631
Cltb 6447 5854
Cltc 2485 6
Fzd2 7468 6862
Fzd5 977 -1199
Ror1 5976 2939
Ror2 5904 5574
Wnt5a -2222 -4294





HS-GAG-degradation

HS-GAG-degradation
metric value
setSize 18
pMANOVA 0.00047
p.adjustMANOVA 0.00423
s.dist 0.526
s.young 0.471
s.old 0.234
p.young 0.000546
p.old 0.0852




Top 20 genes
Gene young old
Sdc2 7435 6631
Gpc6 6891 6273
Sdc1 7061 4784
Ids 6784 4640
Sgsh 6079 5115
Gusb 6165 4930
Glb1l 5086 5055
Hspg2 6535 3769
Sdc3 4012 3827
Naglu 4598 2203
Glb1 5822 1047

Click HERE to show all gene set members

All member genes
young old
Agrn -247 199
Glb1 5822 1047
Glb1l 5086 5055
Gpc1 -3801 -4293
Gpc3 2127 -5769
Gpc4 -3619 -6582
Gpc6 6891 6273
Gusb 6165 4930
Hpse 4346 -2233
Hspg2 6535 3769
Ids 6784 4640
Idua -5121 -5157
Naglu 4598 2203
Sdc1 7061 4784
Sdc2 7435 6631
Sdc3 4012 3827
Sdc4 4355 -9
Sgsh 6079 5115





FOXO-mediated-transcription-of-oxidative-stress,-metabolic-and-neuronal-genes

FOXO-mediated-transcription-of-oxidative-stress,-metabolic-and-neuronal-genes
metric value
setSize 23
pMANOVA 0.00953
p.adjustMANOVA 0.0497
s.dist 0.162
s.young 0.0955
s.old -0.131
p.young 0.428
p.old 0.277




Top 20 genes
Gene young old
Smad3 3925 -4081
Trim63 3120 -2972
Nr3c1 2927 -1142
Smad2 2945 -931
Foxo1 2248 -1056
Sin3a 625 -2529
Fbxo32 2078 -742

Click HERE to show all gene set members

All member genes
young old
Abca6 6893 4821
Atxn3 1750 2527
Cat -2626 -1549
Fbxo32 2078 -742
Foxo1 2248 -1056
Foxo3 -3836 -5969
Foxo4 -4257 -3546
Foxo6 -2013 -6019
Gck 6897 4422
Hdac1 5275 3944
Hdac2 -4789 -5887
Nr3c1 2927 -1142
Pck1 1338 425
Plxna4 5182 3976
Ppargc1a -6363 -7511
Sin3a 625 -2529
Sirt3 -6560 -6988
Smad2 2945 -931
Smad3 3925 -4081
Smad4 4924 4471
Sod2 -7345 -7817
Srebf1 5979 2962
Trim63 3120 -2972





Sialic-acid-metabolism

Sialic-acid-metabolism
metric value
setSize 26
pMANOVA 0.00327
p.adjustMANOVA 0.0207
s.dist 0.239
s.young 0.238
s.old 0.0168
p.young 0.0355
p.old 0.882




Top 20 genes
Gene young old
St8sia1 6367 6714
St3gal2 6995 5852
St6galnac4 6331 6062
Nans 6392 4932
St8sia2 4491 4888
St3gal5 5507 3409
Slc17a5 4456 2342
Glb1 5822 1047
Nanp 2835 1684
Npl 2978 1243
Cmas 3263 831
St3gal1 3058 716
Ctsa 3546 448
Slc35a1 4230 111

Click HERE to show all gene set members

All member genes
young old
Cmas 3263 831
Ctsa 3546 448
Glb1 5822 1047
Gne 1172 -1633
Nanp 2835 1684
Nans 6392 4932
Neu1 -4503 -122
Neu3 -2654 -2701
Npl 2978 1243
Slc17a5 4456 2342
Slc35a1 4230 111
St3gal1 3058 716
St3gal2 6995 5852
St3gal3 -6777 -6624
St3gal4 4466 -4957
St3gal5 5507 3409
St3gal6 -4673 -4593
St6gal1 4351 -2022
St6galnac2 5684 -2059
St6galnac3 48 -5018
St6galnac4 6331 6062
St6galnac6 -7184 -7584
St8sia1 6367 6714
St8sia2 4491 4888
St8sia4 -6404 -5155
St8sia6 -1521 -4549





Downregulation-of-SMAD2/3:SMAD4-transcriptional-activity

Downregulation-of-SMAD2/3:SMAD4-transcriptional-activity
metric value
setSize 23
pMANOVA 0.00601
p.adjustMANOVA 0.0347
s.dist 0.25
s.young 0.248
s.old 0.028
p.young 0.0395
p.old 0.817




Top 20 genes
Gene young old
Skil 7055 6612
Tgif1 6842 6437
Ski 5082 5289
Smurf2 5768 4293
Ube2d3 5709 3978
Smad4 4924 4471
Hdac1 5275 3944
Ncor2 4764 3742
Tgif2 4702 866
Trim33 3450 122

Click HERE to show all gene set members

All member genes
young old
Gm11808 -5706 -216
Hdac1 5275 3944
Ncor1 -4730 -6152
Ncor2 4764 3742
Nedd4l -4561 -6654
Parp1 -6470 -6763
Ppm1a 2517 -2532
Rnf111 268 -2449
Rps27a -1504 -1029
Ski 5082 5289
Skil 7055 6612
Smad2 2945 -931
Smad3 3925 -4081
Smad4 4924 4471
Smurf2 5768 4293
Tgif1 6842 6437
Tgif2 4702 866
Trim33 3450 122
Ubb 5763 -1908
Ubc -1436 -1699
Ube2d1 -4576 -5721
Ube2d3 5709 3978
Usp9x 4374 -3676





Synthesis-of-active-ubiquitin:-roles-of-E1-and-E2-enzymes

Synthesis-of-active-ubiquitin:-roles-of-E1-and-E2-enzymes
metric value
setSize 29
pMANOVA 0.00325
p.adjustMANOVA 0.0207
s.dist 0.225
s.young -0.0147
s.old -0.225
p.young 0.891
p.old 0.0362




Top 20 genes
Gene young old
Ube2b -6925 -7329
Cdc34 -7020 -6823
Ube2r2 -6384 -6380
Ube2a -5301 -5570
Ube2d1 -4576 -5721
Ube2e3 -3833 -6596
Uchl3 -4443 -5303
Ube2k -2821 -4679
Usp5 -2839 -2731
Ube2t -2298 -1230
Ube2d2a -681 -3716
Ubc -1436 -1699
Rps27a -1504 -1029
Ube2s -1064 -1454
Gm11808 -5706 -216

Click HERE to show all gene set members

All member genes
young old
Cdc34 -7020 -6823
Gm11808 -5706 -216
Otulin 7371 6868
Rps27a -1504 -1029
Uba1 3207 -97
Uba6 4311 -2236
Ubb 5763 -1908
Ubc -1436 -1699
Ube2a -5301 -5570
Ube2b -6925 -7329
Ube2c 5815 4785
Ube2d1 -4576 -5721
Ube2d2a -681 -3716
Ube2e1 3650 -762
Ube2e3 -3833 -6596
Ube2g1 2479 -2994
Ube2g2 973 476
Ube2h 4381 -1749
Ube2k -2821 -4679
Ube2q2 4037 -886
Ube2r2 -6384 -6380
Ube2s -1064 -1454
Ube2t -2298 -1230
Ube2w 2917 1334
Ube2z 5974 2915
Uchl3 -4443 -5303
Usp5 -2839 -2731
Usp7 931 -1139
Usp9x 4374 -3676





Triglyceride-catabolism

Triglyceride-catabolism
metric value
setSize 15
pMANOVA 9.29e-06
p.adjustMANOVA 0.000175
s.dist 0.868
s.young -0.503
s.old -0.708
p.young 0.000741
p.old 2.07e-06




Top 20 genes
Gene young old
Plin3 -6858 -7441
Cav1 -5892 -7143
Ppp1cb -6139 -5952
Prkaca -6075 -5990
Fabp3 -5416 -6575
Abhd5 -5259 -6321
Mgll -4506 -7118
Gpd2 -5217 -5433
Lipe -4226 -5925
Ppp1cc -3515 -5893
Fabp4 -2511 -7146
Ppp1ca -2389 -1250
Fabp5 -285 -5130
Plin1 -369 -3417

Click HERE to show all gene set members

All member genes
young old
Abhd5 -5259 -6321
Cav1 -5892 -7143
Fabp3 -5416 -6575
Fabp4 -2511 -7146
Fabp5 -285 -5130
Gpd2 -5217 -5433
Lipe -4226 -5925
Mgll -4506 -7118
Plin1 -369 -3417
Plin3 -6858 -7441
Ppp1ca -2389 -1250
Ppp1cb -6139 -5952
Ppp1cc -3515 -5893
Prkaca -6075 -5990
Prkacb 3875 -3919





Ubiquitin-Mediated-Degradation-of-Phosphorylated-Cdc25A

Ubiquitin-Mediated-Degradation-of-Phosphorylated-Cdc25A
metric value
setSize 48
pMANOVA 2.72e-05
p.adjustMANOVA 0.00043
s.dist 0.339
s.young -0.315
s.old -0.127
p.young 0.000164
p.old 0.129




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Cdc25a 1914 -3410
Chek1 1067 3898
Chek2 -5785 -1283
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





p53-Independent-DNA-Damage-Response

p53-Independent-DNA-Damage-Response
metric value
setSize 48
pMANOVA 2.72e-05
p.adjustMANOVA 0.00043
s.dist 0.339
s.young -0.315
s.old -0.127
p.young 0.000164
p.old 0.129




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Cdc25a 1914 -3410
Chek1 1067 3898
Chek2 -5785 -1283
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





p53-Independent-G1/S-DNA-damage-checkpoint

p53-Independent-G1/S-DNA-damage-checkpoint
metric value
setSize 48
pMANOVA 2.72e-05
p.adjustMANOVA 0.00043
s.dist 0.339
s.young -0.315
s.old -0.127
p.young 0.000164
p.old 0.129




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Cdc25a 1914 -3410
Chek1 1067 3898
Chek2 -5785 -1283
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Assembly-of-the-pre-replicative-complex

Assembly-of-the-pre-replicative-complex
metric value
setSize 64
pMANOVA 6.67e-05
p.adjustMANOVA 0.000917
s.dist 0.186
s.young -0.186
s.old -0.000335
p.young 0.00999
p.old 0.996




Top 20 genes
Gene young old
Psme1 -7082 -7176
Gmnn -6348 -7684
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Mcm8 -4545 -5868
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719

Click HERE to show all gene set members

All member genes
young old
Cdc6 558 3310
Cdt1 3752 3214
E2f1 4237 5630
E2f2 1676 923
E2f3 6585 6156
Gm11808 -5706 -216
Gmnn -6348 -7684
Mcm2 991 5847
Mcm3 4423 5175
Mcm4 5354 4383
Mcm5 3540 5617
Mcm6 5546 6648
Mcm7 647 5992
Mcm8 -4545 -5868
Orc1 2018 3208
Orc2 -52 3709
Orc3 -2266 -4705
Orc4 -1216 -1538
Orc5 -3013 -3379
Orc6 311 1397
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Regulation-of-ornithine-decarboxylase-(ODC)

Regulation-of-ornithine-decarboxylase-(ODC)
metric value
setSize 46
pMANOVA 3.97e-05
p.adjustMANOVA 0.000596
s.dist 0.347
s.young -0.32
s.old -0.135
p.young 0.000173
p.old 0.113




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Oaz1 -6430 -4907
Psme4 -5860 -5252
Oaz2 -6186 -4745
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Nqo1 -3232 -6640
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387

Click HERE to show all gene set members

All member genes
young old
Azin1 7005 6713
Nqo1 -3232 -6640
Oaz1 -6430 -4907
Oaz2 -6186 -4745
Odc1 5704 3746
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263





Autodegradation-of-the-E3-ubiquitin-ligase-COP1

Autodegradation-of-the-E3-ubiquitin-ligase-COP1
metric value
setSize 47
pMANOVA 7.41e-05
p.adjustMANOVA 0.000977
s.dist 0.315
s.young -0.295
s.old -0.11
p.young 0.000469
p.old 0.192




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Atm 1253 1499
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Trp53 4978 4881
Ubb 5763 -1908
Ubc -1436 -1699





Heparan-sulfate/heparin-(HS-GAG)-metabolism

Heparan-sulfate/heparin-(HS-GAG)-metabolism
metric value
setSize 42
pMANOVA 1.75e-07
p.adjustMANOVA 4.23e-06
s.dist 0.551
s.young 0.471
s.old 0.287
p.young 1.31e-07
p.old 0.00131




Top 20 genes
Gene young old
Bgn 7481 6830
Cspg4 7500 6779
Dcn 7414 6701
Sdc2 7435 6631
Vcan 7188 6694
Hs2st1 7325 6476
Ext1 6621 6756
Gpc6 6891 6273
Slc35d2 6737 5737
Xylt1 6328 6030
Sdc1 7061 4784
Hs6st1 6013 5322
Ids 6784 4640
Sgsh 6079 5115
Hs3st3a1 6472 4761
Gusb 6165 4930
Glb1l 5086 5055
Hspg2 6535 3769
Sdc3 4012 3827
B3galt6 4154 3582

Click HERE to show all gene set members

All member genes
young old
Agrn -247 199
B3galt6 4154 3582
B3gat2 2242 2141
B3gat3 -677 -1460
B4galt7 -1177 -3787
Bgn 7481 6830
Cspg4 7500 6779
Cspg5 -3048 1942
Dcn 7414 6701
Ext1 6621 6756
Ext2 1986 -1619
Glb1 5822 1047
Glb1l 5086 5055
Glce 179 -4014
Gpc1 -3801 -4293
Gpc3 2127 -5769
Gpc4 -3619 -6582
Gpc6 6891 6273
Gusb 6165 4930
Hpse 4346 -2233
Hs2st1 7325 6476
Hs3st1 -493 -13
Hs3st3a1 6472 4761
Hs3st3b1 1722 -4410
Hs6st1 6013 5322
Hs6st2 2526 -4992
Hspg2 6535 3769
Ids 6784 4640
Idua -5121 -5157
Naglu 4598 2203
Ndst1 -1729 -4940
Ndst2 4415 2740
Ndst3 3651 3254
Sdc1 7061 4784
Sdc2 7435 6631
Sdc3 4012 3827
Sdc4 4355 -9
Sgsh 6079 5115
Slc35d2 6737 5737
Vcan 7188 6694
Xylt1 6328 6030
Xylt2 2935 -1769





Endosomal-Sorting-Complex-Required-For-Transport-(ESCRT)

Endosomal-Sorting-Complex-Required-For-Transport-(ESCRT)
metric value
setSize 30
pMANOVA 0.00764
p.adjustMANOVA 0.042
s.dist 0.229
s.young 0.225
s.old 0.0412
p.young 0.0328
p.old 0.696




Top 20 genes
Gene young old
Chmp3 6948 5512
Chmp4c 6803 4718
Vps37c 6840 4593
Vps37b 5108 4515
Hgs 4975 3859
Chmp7 3831 4757
Stam2 5387 2587
Vps37d 4303 2352
Chmp4b 5717 1200
Vps4b 4244 959
Chmp5 3696 136
Ubap1 28 767

Click HERE to show all gene set members

All member genes
young old
Chmp2a 1793 -1096
Chmp2b 1232 -1104
Chmp3 6948 5512
Chmp4b 5717 1200
Chmp4c 6803 4718
Chmp5 3696 136
Chmp6 1760 -423
Chmp7 3831 4757
Gm11808 -5706 -216
Hgs 4975 3859
Mvb12a -4581 -3590
Mvb12b 2144 -1272
Rps27a -1504 -1029
Snf8 2394 -1547
Stam 1544 -52
Stam2 5387 2587
Tsg101 -1470 -2662
Ubap1 28 767
Ubb 5763 -1908
Ubc -1436 -1699
Vps25 1921 -2808
Vps28 -262 -2609
Vps36 -1041 -4966
Vps37a -1385 -3737
Vps37b 5108 4515
Vps37c 6840 4593
Vps37d 4303 2352
Vps4a -6836 -7286
Vps4b 4244 959
Vta1 547 -286





Post-NMDA-receptor-activation-events

Post-NMDA-receptor-activation-events
metric value
setSize 50
pMANOVA 0.00131
p.adjustMANOVA 0.00994
s.dist 0.136
s.young 0.122
s.old -0.0609
p.young 0.136
p.old 0.456




Top 20 genes
Gene young old
Rps6ka2 5542 -5598
Prkacb 3875 -3919
Nrgn 3292 -2826
Prkag2 4029 -2192
Grin2c 791 -5559
Arhgef7 863 -4668
Grin2d 5624 -588
Dlg1 1311 -1704
Mapk3 1686 -900
Rac1 328 -2928

Click HERE to show all gene set members

All member genes
young old
Actn2 -2000 -1053
Adcy1 -6563 -7364
Arhgef7 863 -4668
Calm1 -4595 -4970
Camk1 5843 3939
Camk2a -6445 -7293
Camk2b 7071 5898
Camk2g -3829 -6080
Camkk1 6373 6639
Camkk2 6852 5301
Creb1 -3517 -2558
Dlg1 1311 -1704
Dlg2 7058 6995
Dlg3 4869 4306
Dlg4 6131 5964
Erbb4 -4933 -5991
Git1 -110 -1741
Gria2 -268 -1375
Grin2c 791 -5559
Grin2d 5624 -588
Hras -3767 -1016
Kpna2 -4477 -5690
Kras -2032 -4043
Mapk1 -4365 -6214
Mapk3 1686 -900
Mapt -4280 -1351
Nras 4487 1253
Nrg1 6778 5305
Nrgn 3292 -2826
Pdpk1 3688 3414
Prkaa1 3612 3708
Prkaa2 -6100 -7414
Prkab1 -4034 -7255
Prkab2 7420 5930
Prkaca -6075 -5990
Prkacb 3875 -3919
Prkag1 -6213 -4030
Prkag2 4029 -2192
Prkag3 5303 4957
Prkar1a 6142 4210
Prkar1b 1256 1039
Prkar2a -4064 -4969
Prkar2b 3433 313
Prkx 3534 1608
Rac1 328 -2928
Rasgrf2 -3199 -6106
Rps6ka1 4173 287
Rps6ka2 5542 -5598
Rps6ka3 1822 3743
Src 7196 6795





RAB-geranylgeranylation

RAB-geranylgeranylation
metric value
setSize 51
pMANOVA 0.001
p.adjustMANOVA 0.00801
s.dist 0.148
s.young 0.142
s.old -0.041
p.young 0.0801
p.old 0.613




Top 20 genes
Gene young old
Rab40b 6127 -3597
Ptp4a2 2596 -3793
Rab40c 1260 -3488
Rab11b 1212 -3386
Rab2a 2739 -1349
Rab5c 3142 -1160

Click HERE to show all gene set members

All member genes
young old
Chm 4576 910
Chml 4934 6307
Ptp4a2 2596 -3793
Rab10 -4439 -5212
Rab11a -2501 -5885
Rab11b 1212 -3386
Rab12 -5280 -6895
Rab13 6900 6349
Rab14 -5276 -6634
Rab15 7415 6757
Rab17 -6502 -6310
Rab18 -1250 -4021
Rab1a -3223 -6062
Rab1b -6030 -5486
Rab20 -1334 -2750
Rab21 -4812 -6186
Rab22a -2394 -3903
Rab23 5397 5291
Rab24 -4445 -4221
Rab27a -1179 -3721
Rab27b 7417 6961
Rab29 3606 2590
Rab2a 2739 -1349
Rab2b 5649 2106
Rab30 -3630 -2354
Rab31 7227 6762
Rab33b 6021 3134
Rab34 6739 5997
Rab35 5336 845
Rab36 4621 4563
Rab37 -508 -4370
Rab3a -6304 -4824
Rab3d 4802 2649
Rab40b 6127 -3597
Rab40c 1260 -3488
Rab42 -3188 -3257
Rab43 4039 2459
Rab4a 1717 2240
Rab4b 6975 6460
Rab5a 5098 86
Rab5b -1911 -4750
Rab5c 3142 -1160
Rab6a 6083 2806
Rab6b 4327 1836
Rab7 -5369 -6377
Rab7b 6565 5190
Rab8a 1372 1357
Rab8b 4850 2440
Rab9 -2739 -6338
Rabggta -4972 -3450
Rabggtb -3434 -1391





DNA-Replication-Pre-Initiation

DNA-Replication-Pre-Initiation
metric value
setSize 80
pMANOVA 2.28e-05
p.adjustMANOVA 0.000389
s.dist 0.146
s.young -0.139
s.old 0.0426
p.young 0.0315
p.old 0.51




Top 20 genes
Gene young old
Psmd7 -3344 2462
Rpa2 -4464 1119
Pola1 -1035 1098
Psmd4 -73 2814
Orc2 -52 3709
Psmc6 -3319 55

Click HERE to show all gene set members

All member genes
young old
Cdc45 1307 4267
Cdc6 558 3310
Cdc7 3322 3112
Cdk2 -2220 -2606
Cdt1 3752 3214
Dbf4 1985 693
E2f1 4237 5630
E2f2 1676 923
E2f3 6585 6156
Gm11808 -5706 -216
Gmnn -6348 -7684
Mcm10 566 3908
Mcm2 991 5847
Mcm3 4423 5175
Mcm4 5354 4383
Mcm5 3540 5617
Mcm6 5546 6648
Mcm7 647 5992
Mcm8 -4545 -5868
Orc1 2018 3208
Orc2 -52 3709
Orc3 -2266 -4705
Orc4 -1216 -1538
Orc5 -3013 -3379
Orc6 311 1397
Pola1 -1035 1098
Pola2 6434 6486
Pole 737 887
Pole2 2779 862
Pole3 4352 2906
Pole4 -2199 -1885
Prim1 2676 3372
Prim2 1992 3007
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rpa1 -4117 -3049
Rpa2 -4464 1119
Rpa3 -4808 -4927
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Stabilization-of-p53

Stabilization-of-p53
metric value
setSize 51
pMANOVA 7.5e-05
p.adjustMANOVA 0.000979
s.dist 0.291
s.young -0.276
s.old -0.094
p.young 0.000662
p.old 0.246




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Atm 1253 1499
Chek2 -5785 -1283
Gm11808 -5706 -216
Mdm2 4383 4102
Mdm4 -4108 -221
Phf20 4433 -1340
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Trp53 4978 4881
Ubb 5763 -1908
Ubc -1436 -1699





Smooth-Muscle-Contraction

Smooth-Muscle-Contraction
metric value
setSize 31
pMANOVA 0.00921
p.adjustMANOVA 0.0483
s.dist 0.213
s.young 0.0314
s.old 0.211
p.young 0.762
p.old 0.0421




Top 20 genes
Gene young old
Tpm2 7506 6955
Anxa2 6945 6847
Anxa1 7137 6423
Itgb5 7035 6117
Tln1 6888 5990
Sorbs3 5997 6450
Cald1 6283 5671
Myl12a 5669 5304
Anxa6 5722 2604
Pak1 3769 3862
Tpm3 3419 4092
Dysf 1616 5692
Myl6b 569 5006
Vcl 879 1982
Myl12b 844 518

Click HERE to show all gene set members

All member genes
young old
Acta2 -5838 3002
Actg2 -2377 -637
Anxa1 7137 6423
Anxa2 6945 6847
Anxa6 5722 2604
Cald1 6283 5671
Calm1 -4595 -4970
Cav3 -6028 -3293
Dysf 1616 5692
Gucy1a2 -2952 -4419
Itga1 -2422 -3850
Itgb5 7035 6117
Lmod1 -1775 2083
Myh11 -4929 -1359
Myl12a 5669 5304
Myl12b 844 518
Myl6b 569 5006
Myl7 -4553 1587
Myl9 -1361 -776
Mylk -6527 -5002
Pak1 3769 3862
Pak2 1636 -1595
Pxn -1407 -2587
Sorbs1 -5262 -5248
Sorbs3 5997 6450
Tln1 6888 5990
Tpm1 -6913 -5352
Tpm2 7506 6955
Tpm3 3419 4092
Trim72 -5043 -4443
Vcl 879 1982





Activation-of-the-pre-replicative-complex

Activation-of-the-pre-replicative-complex
metric value
setSize 32
pMANOVA 0.00528
p.adjustMANOVA 0.0318
s.dist 0.247
s.young 0.0599
s.old 0.239
p.young 0.558
p.old 0.0191




Top 20 genes
Gene young old
Pola2 6434 6486
Mcm6 5546 6648
Mcm4 5354 4383
Mcm3 4423 5175
Mcm5 3540 5617
Pole3 4352 2906
Cdt1 3752 3214
Cdc7 3322 3112
Prim1 2676 3372
Orc1 2018 3208
Prim2 1992 3007
Mcm2 991 5847
Cdc45 1307 4267
Mcm7 647 5992
Pole2 2779 862
Mcm10 566 3908
Cdc6 558 3310
Dbf4 1985 693
Pole 737 887
Orc6 311 1397

Click HERE to show all gene set members

All member genes
young old
Cdc45 1307 4267
Cdc6 558 3310
Cdc7 3322 3112
Cdk2 -2220 -2606
Cdt1 3752 3214
Dbf4 1985 693
Gmnn -6348 -7684
Mcm10 566 3908
Mcm2 991 5847
Mcm3 4423 5175
Mcm4 5354 4383
Mcm5 3540 5617
Mcm6 5546 6648
Mcm7 647 5992
Mcm8 -4545 -5868
Orc1 2018 3208
Orc2 -52 3709
Orc3 -2266 -4705
Orc4 -1216 -1538
Orc5 -3013 -3379
Orc6 311 1397
Pola1 -1035 1098
Pola2 6434 6486
Pole 737 887
Pole2 2779 862
Pole3 4352 2906
Pole4 -2199 -1885
Prim1 2676 3372
Prim2 1992 3007
Rpa1 -4117 -3049
Rpa2 -4464 1119
Rpa3 -4808 -4927





Ubiquitin-dependent-degradation-of-Cyclin-D

Ubiquitin-dependent-degradation-of-Cyclin-D
metric value
setSize 48
pMANOVA 0.000172
p.adjustMANOVA 0.0019
s.dist 0.288
s.young -0.272
s.old -0.0936
p.young 0.00111
p.old 0.262




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Ccnd1 2065 4489
Cdk4 3801 980
Gm11808 -5706 -216
Gsk3b 6419 5572
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Regulation-of-activated-PAK-2p34-by-proteasome-mediated-degradation

Regulation-of-activated-PAK-2p34-by-proteasome-mediated-degradation
metric value
setSize 46
pMANOVA 6.86e-05
p.adjustMANOVA 0.000933
s.dist 0.343
s.young -0.315
s.old -0.137
p.young 0.000224
p.old 0.108




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Gm11808 -5706 -216
Pak2 1636 -1595
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Protein-ubiquitination

Protein-ubiquitination
metric value
setSize 62
pMANOVA 0.000331
p.adjustMANOVA 0.00324
s.dist 0.156
s.young 0.0222
s.old -0.154
p.young 0.762
p.old 0.036




Top 20 genes
Gene young old
Usp9x 4374 -3676
Ubb 5763 -1908
Pex12 2346 -4157
Uba6 4311 -2236
Ube2h 4381 -1749
Ube2g1 2479 -2994
Rraga 2409 -2434
Derl1 1222 -3922
Ube2q2 4037 -886
Ube2e1 3650 -762
Ube2v2 3853 -647
Pex14 809 -2777
Rnf20 1561 -903
Usp7 931 -1139
Uba1 3207 -97
Cdc73 61 -1350

Click HERE to show all gene set members

All member genes
young old
Bcl10 3503 933
Cdc34 -7020 -6823
Cdc73 61 -1350
Ctr9 -2675 -4126
Derl1 1222 -3922
Gm11808 -5706 -216
Hltf 2357 2874
Leo1 -296 -4202
Otulin 7371 6868
Paf1 876 1604
Pcna -491 3253
Pex10 -6076 -6073
Pex12 2346 -4157
Pex13 -771 -5620
Pex14 809 -2777
Pex2 -5398 -6265
Pex5 5993 2191
Prkdc 4840 6764
Rad18 5613 6072
Rnf144a -559 -5331
Rnf152 -1671 -1422
Rnf181 3668 3650
Rnf20 1561 -903
Rnf40 -2967 501
Rps27a -1504 -1029
Rraga 2409 -2434
Rtf1 -3806 -6273
Selenos 6071 698
Shprh 309 2000
Tmem129 -1574 -1433
Uba1 3207 -97
Uba6 4311 -2236
Ubb 5763 -1908
Ubc -1436 -1699
Ube2a -5301 -5570
Ube2b -6925 -7329
Ube2c 5815 4785
Ube2d1 -4576 -5721
Ube2d2a -681 -3716
Ube2d3 5709 3978
Ube2e1 3650 -762
Ube2e3 -3833 -6596
Ube2g1 2479 -2994
Ube2g2 973 476
Ube2h 4381 -1749
Ube2j2 -2625 -2495
Ube2k -2821 -4679
Ube2n -5254 -5400
Ube2q2 4037 -886
Ube2r2 -6384 -6380
Ube2s -1064 -1454
Ube2t -2298 -1230
Ube2v2 3853 -647
Ube2w 2917 1334
Ube2z 5974 2915
Uchl3 -4443 -5303
Usp5 -2839 -2731
Usp7 931 -1139
Usp9x 4374 -3676
Vcp -2921 -3485
Wac -15 -2599
Wdr61 2151 1382





TNFs-bind-their-physiological-receptors

TNFs-bind-their-physiological-receptors
metric value
setSize 12
pMANOVA 0.00681
p.adjustMANOVA 0.0384
s.dist 0.609
s.young 0.334
s.old 0.509
p.young 0.0452
p.old 0.00225




Top 20 genes
Gene young old
Edar 7207 6941
Eda2r 6802 6567
Tnfrsf11b 5902 6329
Eda 5779 5013
Tnfrsf1a 5169 3989
Tnfrsf1b 3982 4136
Tnfrsf18 1551 2263
Tnfsf13b 435 2212

Click HERE to show all gene set members

All member genes
young old
Eda 5779 5013
Eda2r 6802 6567
Edar 7207 6941
Tnfrsf11b 5902 6329
Tnfrsf13b -660 551
Tnfrsf14 -809 3256
Tnfrsf18 1551 2263
Tnfrsf1a 5169 3989
Tnfrsf1b 3982 4136
Tnfrsf25 -4904 1074
Tnfsf13 373 -1507
Tnfsf13b 435 2212





AUF1-(hnRNP-D0)-binds-and-destabilizes-mRNA

AUF1-(hnRNP-D0)-binds-and-destabilizes-mRNA
metric value
setSize 50
pMANOVA 9.96e-05
p.adjustMANOVA 0.00122
s.dist 0.308
s.young -0.286
s.old -0.113
p.young 0.000463
p.old 0.168




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Eif4g1 -5508 -5906
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Hspa8 -5126 -2542
Psmd3 -5414 -2387
Psmb4 -4157 -2719

Click HERE to show all gene set members

All member genes
young old
Eif4g1 -5508 -5906
Gm11808 -5706 -216
Hnrnpd 2404 -1526
Hspa1b 3948 4977
Hspa8 -5126 -2542
Hspb1 7446 6787
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Orc1-removal-from-chromatin

Orc1-removal-from-chromatin
metric value
setSize 66
pMANOVA 9.92e-05
p.adjustMANOVA 0.00122
s.dist 0.203
s.young -0.201
s.old -0.0276
p.young 0.00476
p.old 0.698




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Mcm8 -4545 -5868
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Rbx1 -4743 -4554
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Skp1a -2255 -5461

Click HERE to show all gene set members

All member genes
young old
Ccna2 5229 5333
Cdc6 558 3310
Cdk2 -2220 -2606
Cdt1 3752 3214
Cul1 -3119 -3855
Gm11808 -5706 -216
Mcm2 991 5847
Mcm3 4423 5175
Mcm4 5354 4383
Mcm5 3540 5617
Mcm6 5546 6648
Mcm7 647 5992
Mcm8 -4545 -5868
Orc1 2018 3208
Orc2 -52 3709
Orc3 -2266 -4705
Orc4 -1216 -1538
Orc5 -3013 -3379
Orc6 311 1397
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rbx1 -4743 -4554
Rps27a -1504 -1029
Skp1a -2255 -5461
Skp2 3484 2048
Ubb 5763 -1908
Ubc -1436 -1699





CDT1-association-with-the-CDC6:ORC:origin-complex

CDT1-association-with-the-CDC6:ORC:origin-complex
metric value
setSize 55
pMANOVA 2.89e-05
p.adjustMANOVA 0.000451
s.dist 0.32
s.young -0.296
s.old -0.123
p.young 0.000149
p.old 0.116




Top 20 genes
Gene young old
Psme1 -7082 -7176
Gmnn -6348 -7684
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Mcm8 -4545 -5868
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719

Click HERE to show all gene set members

All member genes
young old
Cdc6 558 3310
Cdt1 3752 3214
Gm11808 -5706 -216
Gmnn -6348 -7684
Mcm8 -4545 -5868
Orc1 2018 3208
Orc2 -52 3709
Orc3 -2266 -4705
Orc4 -1216 -1538
Orc5 -3013 -3379
Orc6 311 1397
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Cross-presentation-of-soluble-exogenous-antigens-(endosomes)

Cross-presentation-of-soluble-exogenous-antigens-(endosomes)
metric value
setSize 44
pMANOVA 0.000519
p.adjustMANOVA 0.00461
s.dist 0.289
s.young -0.271
s.old -0.1
p.young 0.00186
p.old 0.25




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Fcgr1 5848 4335
Mrc1 4115 -2660
Mrc2 7426 6606
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263





Intra-Golgi-traffic

Intra-Golgi-traffic
metric value
setSize 41
pMANOVA 0.00573
p.adjustMANOVA 0.0332
s.dist 0.168
s.young 0.168
s.old -0.00291
p.young 0.063
p.old 0.974




Top 20 genes
Gene young old
Man2a2 3550 -4096
Cog2 2381 -2488
Cog3 1640 -3468
Gosr2 6073 -777
Ykt6 4836 -818
Vti1a 2869 -1116
Man1a 664 -2507
Cyth4 536 -1578
Stx16 4933 -115

Click HERE to show all gene set members

All member genes
young old
Arf1 -59 -3518
Bet1l 5334 4588
Cog1 3791 2760
Cog2 2381 -2488
Cog3 1640 -3468
Cog4 -3964 -4303
Cog5 -5907 -6472
Cog6 -3930 -6209
Cog7 -2722 -4763
Cog8 -6900 -7344
Cux1 6746 4816
Cyth1 -5817 -6706
Cyth2 5383 2969
Cyth3 7000 6420
Cyth4 536 -1578
Golga5 4364 2357
Golim4 7319 6690
Gosr1 -1133 -2009
Gosr2 6073 -777
Man1a 664 -2507
Man1a2 5867 5756
Man1c1 5900 2279
Man2a1 2682 1662
Man2a2 3550 -4096
Napa -5159 -4315
Napb 1860 6167
Napg 2133 3081
Nsf -957 -3637
Rab30 -3630 -2354
Rab33b 6021 3134
Rab36 4621 4563
Rgp1 -2686 -1308
Ric1 -3551 -4586
Snap29 -5199 -6114
Stx16 4933 -115
Stx5a 4418 3544
Stx6 4375 3057
Trip11 -2178 -3383
Vps45 3111 3511
Vti1a 2869 -1116
Ykt6 4836 -818





Regulation-of-Apoptosis

Regulation-of-Apoptosis
metric value
setSize 49
pMANOVA 1.45e-05
p.adjustMANOVA 0.000261
s.dist 0.39
s.young -0.347
s.old -0.177
p.young 2.6e-05
p.old 0.0317




Top 20 genes
Gene young old
Opa1 -6928 -7669
Psme1 -7082 -7176
Oma1 -6335 -7529
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Arhgap10 -5360 -3726
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387

Click HERE to show all gene set members

All member genes
young old
Arhgap10 -5360 -3726
Gm11808 -5706 -216
Oma1 -6335 -7529
Opa1 -6928 -7669
Pak2 1636 -1595
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Vpu-mediated-degradation-of-CD4

Vpu-mediated-degradation-of-CD4
metric value
setSize 48
pMANOVA 5.1e-05
p.adjustMANOVA 0.000725
s.dist 0.358
s.young -0.323
s.old -0.154
p.young 0.000109
p.old 0.0644




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Skp1a -2255 -5461
Psmb4 -4157 -2719
Psmd2 -4258 -2549

Click HERE to show all gene set members

All member genes
young old
Btrc -983 -2965
Cd4 -2571 -2169
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Skp1a -2255 -5461
Ubb 5763 -1908
Ubc -1436 -1699





Degradation-of-AXIN

Degradation-of-AXIN
metric value
setSize 51
pMANOVA 0.000292
p.adjustMANOVA 0.00294
s.dist 0.276
s.young -0.259
s.old -0.0933
p.young 0.00136
p.old 0.249




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Tnks2 -4497 -6705
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549

Click HERE to show all gene set members

All member genes
young old
Axin1 3573 2919
Axin2 5432 6015
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rnf146 -2003 400
Rps27a -1504 -1029
Smurf2 5768 4293
Tnks 3088 977
Tnks2 -4497 -6705
Ubb 5763 -1908
Ubc -1436 -1699





Vif-mediated-degradation-of-APOBEC3G

Vif-mediated-degradation-of-APOBEC3G
metric value
setSize 48
pMANOVA 3.71e-05
p.adjustMANOVA 0.000565
s.dist 0.376
s.young -0.335
s.old -0.17
p.young 5.91e-05
p.old 0.0414




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Rbx1 -4743 -4554
Psmc3 -5727 -3198
Eloc -3360 -5140
Psmc5 -5068 -3092
Cul5 -2055 -6542
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387

Click HERE to show all gene set members

All member genes
young old
Cul5 -2055 -6542
Eloc -3360 -5140
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rbx1 -4743 -4554
Rps27a -1504 -1029
Ubb 5763 -1908
Ubc -1436 -1699





Class-I-peroxisomal-membrane-protein-import

Class-I-peroxisomal-membrane-protein-import
metric value
setSize 19
pMANOVA 0.00017
p.adjustMANOVA 0.0019
s.dist 0.66
s.young -0.377
s.old -0.542
p.young 0.00441
p.old 4.3e-05




Top 20 genes
Gene young old
Pxmp2 -6949 -7658
Abcd3 -6653 -7370
Pxmp4 -6593 -7236
Pex19 -6534 -6309
Abcd1 -6190 -6228
Pex2 -5398 -6265
Abcd2 -5558 -4862
Pex11b -3864 -5317
Atad1 -3794 -5152
Pex16 -3583 -3499
Fis1 -3956 -2973
Pex26 -2597 -2650
Pex13 -771 -5620
Slc25a17 -336 -4956
Aldh3a2 -30 -948

Click HERE to show all gene set members

All member genes
young old
Abcd1 -6190 -6228
Abcd2 -5558 -4862
Abcd3 -6653 -7370
Acbd5 6712 4401
Aldh3a2 -30 -948
Atad1 -3794 -5152
Fis1 -3956 -2973
Pex11b -3864 -5317
Pex12 2346 -4157
Pex13 -771 -5620
Pex14 809 -2777
Pex16 -3583 -3499
Pex19 -6534 -6309
Pex2 -5398 -6265
Pex26 -2597 -2650
Pex3 1333 -4235
Pxmp2 -6949 -7658
Pxmp4 -6593 -7236
Slc25a17 -336 -4956





Negative-regulation-of-NOTCH4-signaling

Negative-regulation-of-NOTCH4-signaling
metric value
setSize 51
pMANOVA 0.000122
p.adjustMANOVA 0.00147
s.dist 0.318
s.young -0.291
s.old -0.128
p.young 0.000329
p.old 0.114




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Akt1 -6210 -5765
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Rbx1 -4743 -4554
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Skp1a -2255 -5461
Cul1 -3119 -3855

Click HERE to show all gene set members

All member genes
young old
Akt1 -6210 -5765
Cul1 -3119 -3855
Fbxw7 -1767 3232
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psmf1 1562 263
Rbx1 -4743 -4554
Rps27a -1504 -1029
Skp1a -2255 -5461
Tacc3 6168 3333
Ubb 5763 -1908
Ubc -1436 -1699
Ywhaz 5524 2659





SCF-beta-TrCP-mediated-degradation-of-Emi1

SCF-beta-TrCP-mediated-degradation-of-Emi1
metric value
setSize 51
pMANOVA 8.26e-05
p.adjustMANOVA 0.00106
s.dist 0.335
s.young -0.303
s.old -0.142
p.young 0.000181
p.old 0.0802




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Skp1a -2255 -5461
Cul1 -3119 -3855
Psmb4 -4157 -2719

Click HERE to show all gene set members

All member genes
young old
Btrc -983 -2965
Cdc20 1433 3116
Cul1 -3119 -3855
Fbxo5 2497 2209
Fzr1 -2816 -3420
Gm11808 -5706 -216
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Skp1a -2255 -5461
Ubb 5763 -1908
Ubc -1436 -1699





DARPP-32-events

DARPP-32-events
metric value
setSize 22
pMANOVA 0.0079
p.adjustMANOVA 0.0431
s.dist 0.395
s.young -0.187
s.old -0.348
p.young 0.129
p.old 0.00475




Top 20 genes
Gene young old
Pde4a -7051 -7640
Pde4c -6981 -7481
Pde4d -6468 -7754
Prkaca -6075 -5990
Ppp3cb -5310 -6375
Calm1 -4595 -4970
Prkar2a -4064 -4969
Ppp2r1a -5112 -3845
Ppp2r5d -3601 -2560
Ppp3ca -1178 -2997
Ppp1ca -2389 -1250
Ppp2r1b -1090 -2605

Click HERE to show all gene set members

All member genes
young old
Calm1 -4595 -4970
Cdk5 -807 351
Pde4a -7051 -7640
Pde4b 5944 -1416
Pde4c -6981 -7481
Pde4d -6468 -7754
Ppp1ca -2389 -1250
Ppp2ca 1302 1549
Ppp2cb 2162 -1862
Ppp2r1a -5112 -3845
Ppp2r1b -1090 -2605
Ppp2r5d -3601 -2560
Ppp3ca -1178 -2997
Ppp3cb -5310 -6375
Ppp3cc 483 -771
Ppp3r1 1460 -6334
Prkaca -6075 -5990
Prkacb 3875 -3919
Prkar1a 6142 4210
Prkar1b 1256 1039
Prkar2a -4064 -4969
Prkar2b 3433 313





Regulation-of-RUNX3-expression-and-activity

Regulation-of-RUNX3-expression-and-activity
metric value
setSize 52
pMANOVA 0.00251
p.adjustMANOVA 0.0165
s.dist 0.177
s.young -0.176
s.old -0.0165
p.young 0.0283
p.old 0.837




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837
Psmd6 -2219 -3583

Click HERE to show all gene set members

All member genes
young old
Cbfb 5644 4451
Ep300 -2809 -454
Gm11808 -5706 -216
Mdm2 4383 4102
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psmf1 1562 263
Rps27a -1504 -1029
Runx3 2355 4039
Smurf1 6281 2428
Smurf2 5768 4293
Src 7196 6795
Tgfb1 6984 5531
Ubb 5763 -1908
Ubc -1436 -1699





Biosynthesis-of-the-N-glycan-precursor-(dolichol-lipid-linked-oligosaccharide,-LLO)-and-transfer-to-a-nascent-protein

Biosynthesis-of-the-N-glycan-precursor-(dolichol-lipid-linked-oligosaccharide,-LLO)-and-transfer-to-a-nascent-protein
metric value
setSize 69
pMANOVA 0.000668
p.adjustMANOVA 0.00577
s.dist 0.143
s.young 0.142
s.old -0.0172
p.young 0.0415
p.old 0.804




Top 20 genes
Gene young old
St3gal4 4466 -4957
Rft1 3829 -5039
St6galnac2 5684 -2059
St6gal1 4351 -2022
Dpm3 1522 -4346
Dolpp1 921 -3874
Nus1 1719 -1890
Nagk 3592 -731
Gne 1172 -1633
Fcsk 1861 -708
St6galnac3 48 -5018
Fpgt 1415 -71

Click HERE to show all gene set members

All member genes
young old
Alg1 6726 5694
Alg10b -4303 -7294
Alg11 -1229 -3115
Alg12 -2699 -3881
Alg14 474 3160
Alg2 -518 -1267
Alg3 -322 -2230
Alg5 5916 5071
Alg6 -1841 -4848
Alg8 1524 339
Alg9 -2204 -6400
Amdhd2 4916 2058
Cmas 3263 831
Ctsa 3546 448
Dhdds 4837 4695
Dolk -5587 -3086
Dolpp1 921 -3874
Dpagt1 -2089 -1947
Dpm1 -1101 -5227
Dpm2 4502 2233
Dpm3 1522 -4346
Fcsk 1861 -708
Fpgt 1415 -71
Fuom -6371 -3820
Gfpt1 4092 919
Gfpt2 -5090 1134
Glb1 5822 1047
Gmds 3531 4447
Gmppa 3080 1628
Gmppb 1721 2324
Gne 1172 -1633
Gnpnat1 4972 1038
Mpdu1 5512 3468
Mpi -7175 -6989
Mvd -786 1263
Nagk 3592 -731
Nanp 2835 1684
Nans 6392 4932
Neu1 -4503 -122
Neu3 -2654 -2701
Npl 2978 1243
Nudt14 -7278 -7587
Nus1 1719 -1890
Pgm3 5901 4554
Pmm1 7486 6895
Pmm2 -3323 -5784
Renbp 4245 2617
Rft1 3829 -5039
Slc17a5 4456 2342
Slc35a1 4230 111
Slc35c1 2466 1410
Srd5a3 4993 3726
St3gal1 3058 716
St3gal2 6995 5852
St3gal3 -6777 -6624
St3gal4 4466 -4957
St3gal5 5507 3409
St3gal6 -4673 -4593
St6gal1 4351 -2022
St6galnac2 5684 -2059
St6galnac3 48 -5018
St6galnac4 6331 6062
St6galnac6 -7184 -7584
St8sia1 6367 6714
St8sia2 4491 4888
St8sia4 -6404 -5155
St8sia6 -1521 -4549
Tsta3 -4656 -3516
Uap1 -4914 -3592





The-role-of-GTSE1-in-G2/M-progression-after-G2-checkpoint

The-role-of-GTSE1-in-G2/M-progression-after-G2-checkpoint
metric value
setSize 55
pMANOVA 0.00173
p.adjustMANOVA 0.0127
s.dist 0.179
s.young -0.178
s.old -0.019
p.young 0.0223
p.old 0.808




Top 20 genes
Gene young old
Psme1 -7082 -7176
Psmb2 -6229 -6389
Psmb7 -6295 -6022
Psmd12 -5949 -6045
Psme4 -5860 -5252
Psmb3 -6394 -4507
Psmb6 -5905 -4631
Psma6 -6198 -4392
Psma1 -5057 -5354
Psmc2 -5438 -4371
Psme3 -4430 -5111
Psma4 -4195 -5256
Psmc3 -5727 -3198
Psmc5 -5068 -3092
Psmb5 -5358 -2463
Psmd1 -4493 -2930
Psmd3 -5414 -2387
Psmb4 -4157 -2719
Psmd2 -4258 -2549
Psme2b -2823 -3837

Click HERE to show all gene set members

All member genes
young old
Ccnb1 4674 4624
Ccnb2 5296 3604
Cdk1 5710 3875
Cdkn1a 5001 5540
Fkbpl 686 829
Gm11808 -5706 -216
Gtse1 4236 4258
Hsp90ab1 -3870 -989
Mapre1 5505 2614
Plk1 4893 4675
Psma1 -5057 -5354
Psma3 -1668 -1270
Psma4 -4195 -5256
Psma5 917 4879
Psma6 -6198 -4392
Psma7 -5203 -1132
Psmb1 -3490 -1504
Psmb10 3247 6154
Psmb2 -6229 -6389
Psmb3 -6394 -4507
Psmb4 -4157 -2719
Psmb5 -5358 -2463
Psmb6 -5905 -4631
Psmb7 -6295 -6022
Psmb8 188 2895
Psmb9 239 987
Psmc1 -4509 -1482
Psmc2 -5438 -4371
Psmc3 -5727 -3198
Psmc4 580 1965
Psmc5 -5068 -3092
Psmc6 -3319 55
Psmd1 -4493 -2930
Psmd10 2830 -1174
Psmd11 5474 5901
Psmd12 -5949 -6045
Psmd13 2269 4514
Psmd14 1389 1667
Psmd2 -4258 -2549
Psmd3 -5414 -2387
Psmd4 -73 2814
Psmd5 2751 2805
Psmd6 -2219 -3583
Psmd7 -3344 2462
Psmd8 5830 6151
Psmd9 811 -3604
Psme1 -7082 -7176
Psme2b -2823 -3837
Psme3 -4430 -5111
Psme4 -5860 -5252
Psmf1 1562 263
Rps27a -1504 -1029
Trp53 4978 4881
Ubb 5763 -1908
Ubc -1436 -1699





Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.0.2 (2020-06-22)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 18.04.4 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] pkgload_1.1.0   GGally_2.0.0    beeswarm_0.2.3  gtools_3.8.2   
##  [5] echarts4r_0.3.2 mitch_1.0.6     gplots_3.0.3    reshape2_1.4.4 
##  [9] forcats_0.5.0   stringr_1.4.0   dplyr_1.0.0     purrr_0.3.4    
## [13] readr_1.3.1     tidyr_1.1.0     tibble_3.0.1    ggplot2_3.3.2  
## [17] tidyverse_1.3.0
## 
## loaded via a namespace (and not attached):
##  [1] nlme_3.1-148       bitops_1.0-6       fs_1.4.2           lubridate_1.7.9   
##  [5] RColorBrewer_1.1-2 httr_1.4.1         rprojroot_1.3-2    tools_4.0.2       
##  [9] backports_1.1.8    R6_2.4.1           KernSmooth_2.23-17 DBI_1.1.0         
## [13] colorspace_1.4-1   withr_2.2.0        tidyselect_1.1.0   gridExtra_2.3     
## [17] compiler_4.0.2     cli_2.0.2          rvest_0.3.5        xml2_1.3.2        
## [21] desc_1.2.0         labeling_0.3       caTools_1.18.0     scales_1.1.1      
## [25] digest_0.6.25      rmarkdown_2.3      pkgconfig_2.0.3    htmltools_0.5.0   
## [29] dbplyr_1.4.4       fastmap_1.0.1      highr_0.8          htmlwidgets_1.5.1 
## [33] rlang_0.4.6        readxl_1.3.1       rstudioapi_0.11    shiny_1.5.0       
## [37] generics_0.0.2     farver_2.0.3       jsonlite_1.7.0     magrittr_1.5      
## [41] Rcpp_1.0.4.6       munsell_0.5.0      fansi_0.4.1        lifecycle_0.2.0   
## [45] stringi_1.4.6      yaml_2.2.1         MASS_7.3-51.6      plyr_1.8.6        
## [49] grid_4.0.2         blob_1.2.1         parallel_4.0.2     gdata_2.18.0      
## [53] promises_1.1.1     crayon_1.3.4       lattice_0.20-41    haven_2.3.1       
## [57] hms_0.5.3          knitr_1.29         pillar_1.4.4       reprex_0.3.0      
## [61] glue_1.4.1         evaluate_0.14      modelr_0.1.8       vctrs_0.3.1       
## [65] httpuv_1.5.4       testthat_2.3.2     cellranger_1.1.0   gtable_0.3.0      
## [69] reshape_0.8.8      assertthat_0.2.1   xfun_0.15          mime_0.9          
## [73] xtable_1.8-4       broom_0.5.6        later_1.1.0.1      pbmcapply_1.5.0   
## [77] ellipsis_0.3.1

END of report