Module	Section	Sample Name	Source
Samtools	flagstat	AY-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AY-pos_mRNA.fq.bam.stats
Samtools	flagstat	ST-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/ST-pre_mRNA.fq.bam.stats
Samtools	flagstat	ST-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/ST-pos_mRNA.fq.bam.stats
Samtools	flagstat	AY-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AY-pre_mRNA.fq.bam.stats
Samtools	flagstat	SB-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/SB-pre_mRNA.fq.bam.stats
Samtools	flagstat	RH-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/RH-pre_mRNA.fq.bam.stats
Samtools	flagstat	AD-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AD-pre_mRNA.fq.bam.stats
Samtools	flagstat	AKH-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AKH-pos_mRNA.fq.bam.stats
Samtools	flagstat	AD-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AD-pos_mRNA.fq.bam.stats
Samtools	flagstat	AKH-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/AKH-pre_mRNA.fq.bam.stats
Samtools	flagstat	SB-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/SB-pos_mRNA.fq.bam.stats
Samtools	flagstat	RH-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/rrna/RH-pos_mRNA.fq.bam.stats
FastQC	all_sections	RH-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/RH-pre_mRNA_fastqc.zip
FastQC	all_sections	SB-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/SB-pre_mRNA_fastqc.zip
FastQC	all_sections	AKH-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AKH-pre_mRNA_fastqc.zip
FastQC	all_sections	AD-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AD-pre_mRNA_fastqc.zip
FastQC	all_sections	AKH-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AKH-pos_mRNA_fastqc.zip
FastQC	all_sections	SB-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/SB-pos_mRNA_fastqc.zip
FastQC	all_sections	ST-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/ST-pos_mRNA_fastqc.zip
FastQC	all_sections	AY-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AY-pre_mRNA_fastqc.zip
FastQC	all_sections	RH-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/RH-pos_mRNA_fastqc.zip
FastQC	all_sections	ST-pre_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/ST-pre_mRNA_fastqc.zip
FastQC	all_sections	AY-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AY-pos_mRNA_fastqc.zip
FastQC	all_sections	AD-pos_mRNA	/home/mark.ziemann@domain.internal.burnet.edu.au/projects/markhargreave/exercise_histone/raw_data/rna/AD-pos_mRNA_fastqc.zip