Source: https://github.com/markziemann/GeneNameErrors2020

View the reports: http://ziemann-lab.net/public/gene_name_errors/

Intro

Gene name errors result when data are imported improperly into MS Excel and other spreadsheet programs (Zeeberg et al, 2004). Certain gene names like MARCH3, SEPT2 and DEC1 are converted into date format. These errors are surprisingly common in supplementary data files in the field of genomics (Ziemann et al, 2016). This could be considered a small error because it only affects a small number of genes, however it is symptomtic of poor data processing methods. The purpose of this script is to identify gene name errors present in supplementary files of PubMed Central articles in the previous month.

library("jsonlite")
library("xml2")
library("reutils")
library("readxl")

Get PMC IDs

Here I will be getting PubMed Central IDs for the previous month.

Start with figuring out the date to search PubMed Central.

DATE="2021/1"

Let’s see how many PMC IDs we have in the past month.

QUERY ='((genom*[Abstract]))'

ESEARCH_RES <- esearch(term=QUERY, db = "pmc", rettype = "uilist", retmode = "xml", retstart = 0, 
  retmax = 5000000, usehistory = TRUE, webenv = NULL, querykey = NULL, sort = NULL, field = NULL, 
  datetype = NULL, reldate = NULL, mindate = DATE, maxdate = DATE)

pmc <- efetch(ESEARCH_RES,retmode="text",rettype="uilist",outfile="pmcids.txt")
## Retrieving UIDs 1 to 500
## Retrieving UIDs 501 to 1000
## Retrieving UIDs 1001 to 1500
## Retrieving UIDs 1501 to 2000
## Retrieving UIDs 2001 to 2500
## Retrieving UIDs 2501 to 3000
## Retrieving UIDs 3001 to 3500
## Retrieving UIDs 3501 to 4000
## Retrieving UIDs 4001 to 4500
## Retrieving UIDs 4501 to 5000
pmc <- read.table(pmc)
pmc <- paste("PMC",pmc$V1,sep="")
NUM_ARTICLES=length(pmc)
NUM_ARTICLES
## [1] 4511
writeLines(pmc,con="pmc.txt")

Run the screen

Now run the bash script. Note that false positives can occur (~1.5%) and these results have not been verified by a human.

Here are some definitions:

#system("./gene_names.sh pmc.txt")
results <- readLines("results.txt")

XLS <- results[grep("XLS",results,ignore.case=TRUE)]
NUM_XLS = length(XLS)
NUM_XLS
## [1] 3169
NUM_XLS_ARTICLES = length(unique(sapply(strsplit(XLS," "),"[[",1)))
NUM_XLS_ARTICLES
## [1] 648
GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>2]
#GENELISTS

NUM_GENELISTS <- length(unique(sapply(strsplit(GENELISTS," "),"[[",2)))
NUM_GENELISTS
## [1] 398
NUM_GENELIST_ARTICLES <- length(unique(sapply(strsplit(GENELISTS," "),"[[",1)))
NUM_GENELIST_ARTICLES
## [1] 221
ERROR_GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>3]
#ERROR_GENELISTS

NUM_ERROR_GENELISTS = length(ERROR_GENELISTS)
NUM_ERROR_GENELISTS
## [1] 204
GENELIST_ERROR_ARTICLES <- unique(sapply(strsplit(ERROR_GENELISTS," "),"[[",1))
GENELIST_ERROR_ARTICLES
##  [1] "PMC7842022" "PMC7836161" "PMC7825165" "PMC7822813" "PMC7821633"
##  [6] "PMC7817693" "PMC7815088" "PMC7814551" "PMC7844323" "PMC7826362"
## [11] "PMC7812929" "PMC7807721" "PMC7838615" "PMC7815943" "PMC7801399"
## [16] "PMC7821388" "PMC7820775" "PMC7819609" "PMC7794586" "PMC7794364"
## [21] "PMC7791999" "PMC7791837" "PMC7792223" "PMC7791882" "PMC7789526"
## [26] "PMC7788918" "PMC7788893" "PMC7788839" "PMC7788826" "PMC7788777"
## [31] "PMC7788743" "PMC7786480" "PMC7812315" "PMC7782737" "PMC7782510"
## [36] "PMC7780630" "PMC7797533" "PMC7773562" "PMC7811140" "PMC7793309"
## [41] "PMC7793258" "PMC7824480" "PMC7790417" "PMC7788095" "PMC7785587"
## [46] "PMC7757804" "PMC7773550" "PMC7779551" "PMC7745987" "PMC7744083"
## [51] "PMC7773997" "PMC7773990" "PMC7793715" "PMC7758050" "PMC7782839"
## [56] "PMC7796900" "PMC7781436" "PMC7784491" "PMC7803632" "PMC7762488"
## [61] "PMC7746351" "PMC7842189" "PMC7782095" "PMC7764503" "PMC7774731"
## [66] "PMC7790754" "PMC7759458" "PMC7818422" "PMC7116647"
NUM_ERROR_GENELIST_ARTICLES <- length(GENELIST_ERROR_ARTICLES) 
NUM_ERROR_GENELIST_ARTICLES
## [1] 69
ERROR_PROPORTION = NUM_ERROR_GENELIST_ARTICLES / NUM_GENELIST_ARTICLES
ERROR_PROPORTION
## [1] 0.3122172

Look at the errors detected

Here you can have a look at all the gene lists detected in the past month, as well as those with errors. The dates are obvious errors, these are commonly dates in September, March, December and October. The five-digit numbers represent dates as they are encoded in the Excel internal format. The five digit number is the number of days since 1900. If you were to take these numbers and put them into Excel and format the cells as dates, then these will also mostly map to dates in September, March, December and October.

#GENELISTS

ERROR_GENELISTS
##   [1] "PMC7842022 /pmc/articles/PMC7842022/bin/12935_2021_1774_MOESM3_ESM.xlsx Hsapiens 1 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [2] "PMC7842022 /pmc/articles/PMC7842022/bin/12935_2021_1774_MOESM4_ESM.xlsx Hsapiens 27 43891 43898 44077 44075 43901 44166 44079 43899 44076 43894 44080 43896 43895 44081 44086 43897 43891 44083 44078 43892 44082 44084 44085 43892 44088 43900 43893"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##   [3] "PMC7836161 /pmc/articles/PMC7836161/bin/13059_2020_2252_MOESM5_ESM.xlsx Hsapiens 5 43710 43710 43710 43710 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##   [4] "PMC7825165 /pmc/articles/PMC7825165/bin/12864_2021_7387_MOESM4_ESM.xlsx Ggallus 2 43715 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##   [5] "PMC7822813 /pmc/articles/PMC7822813/bin/41467_2020_20809_MOESM6_ESM.xlsx Mmusculus 4 37316 39142 39692 37681"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
##   [6] "PMC7822813 /pmc/articles/PMC7822813/bin/41467_2020_20809_MOESM6_ESM.xlsx Mmusculus 1 39508"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##   [7] "PMC7821633 /pmc/articles/PMC7821633/bin/12860_2021_346_MOESM4_ESM.xlsx Hsapiens 180 44081 44076 44083 43896 44080 43900 43893 44079 44082 43897 44088 44077 44078 43894 43892 44086 43899 43898 43895 43892 44075 44085 44084 43901 43891 43891 43892 44077 44078 43892 44081 44080 43897 44085 43899 44086 43894 43891 43896 44088 44082 43898 44076 44166 43900 43893 44075 44089 43901 44083 44079 43891 44084 43895 43898 44083 44083 43900 43892 44076 43895 44081 43901 44078 44166 43896 43891 44082 43898 44077 43892 43891 44079 44084 44080 44086 44085 43897 43894 43893 44075 43899 44075 44083 43891 43896 43901 43892 43892 43897 44086 43895 43900 44080 43898 44085 44078 43894 44076 44081 43899 44075 44081 44082 44084 44078 43901 44077 44086 43895 43898 44076 43891 43897 43893 44088 43891 44089 43896 43894 43899 44080 44085 44083 44079 43892 43900 43892 43892 43891 43898 43899 44086 44075 44078 43900 43892 43897 43894 44079 44077 44085 43891 43896 43901 43893 44082 44081 44088 44166 44080 44076 43895 44085 44083 44086 43891 43897 44081 43900 44078 44082 44077 43892 43896 43898 43894 43895 44075 44076 43893 43901 43891 44079 43892 44088 44080 43899 44084 44089"
##   [8] "PMC7821633 /pmc/articles/PMC7821633/bin/12860_2021_346_MOESM8_ESM.xlsx Hsapiens 147 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082 44082"                                                                                                                                                                                                      
##   [9] "PMC7817693 /pmc/articles/PMC7817693/bin/41467_2020_20783_MOESM3_ESM.xlsx Hsapiens 1 41334"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [10] "PMC7815088 /pmc/articles/PMC7815088/bin/pone.0245526.s012.xlsx Hsapiens 4 43353 43170 43346 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [11] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM16_ESM.xls Hsapiens 7 2020/03/02 2020/03/06 2020/09/15 2020/09/01 2020/09/02 2020/09/06 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [12] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM16_ESM.xls Hsapiens 6 2020/03/08 2020/03/01 2020/03/02 2020/03/06 2020/03/07 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [13] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM16_ESM.xls Hsapiens 2 2020/03/06 2020/03/07"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [14] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM16_ESM.xls Hsapiens 9 2020/03/01 2020/03/06 2020/03/09 2020/09/15 2020/09/01 2020/09/02 2020/09/06 2020/09/07 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [15] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [16] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [17] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [18] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [19] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [20] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM2_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [21] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM3_ESM.xls Hsapiens 7 2020/03/02 2020/03/06 2020/09/15 2020/09/01 2020/09/02 2020/09/06 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [22] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM3_ESM.xls Hsapiens 9 2020/03/01 2020/03/06 2020/03/09 2020/09/15 2020/09/01 2020/09/02 2020/09/06 2020/09/07 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [23] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM3_ESM.xls Hsapiens 2 2020/03/06 2020/03/07"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [24] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM3_ESM.xls Hsapiens 6 2020/03/01 2020/03/02 2020/03/06 2020/03/07 2020/03/08 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [25] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM5_ESM.xls Hsapiens 26 2020/12/01 2020/03/01 2020/03/02 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15 2020/09/01 2020/09/10 2020/09/11 2020/09/12 2020/09/02 2020/09/03 2020/09/04 2020/09/06 2020/09/07 2020/09/08 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [26] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM5_ESM.xls Hsapiens 26 2020/12/01 2020/03/01 2020/03/02 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15 2020/09/01 2020/09/10 2020/09/11 2020/09/12 2020/09/02 2020/09/03 2020/09/04 2020/09/06 2020/09/07 2020/09/08 2020/09/09"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [27] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM5_ESM.xls Hsapiens 13 2020/12/01 2020/03/01 2020/03/10 2020/03/11 2020/03/02 2020/03/03 2020/03/04 2020/03/05 2020/03/06 2020/03/07 2020/03/08 2020/03/09 2020/09/15"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [28] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 14 2020/03/09 2020/03/01 2020/09/15 2020/03/08 2020/03/10 2020/03/07 2020/12/01 2020/03/02 2020/03/06 2020/03/11 2020/03/05 2020/03/11 2020/03/04 2020/03/03"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
##  [29] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 13 2020/03/06 2020/03/02 2020/03/05 2020/03/07 2020/12/01 2020/03/08 2020/03/04 2020/03/11 2020/03/01 2020/09/15 2020/03/09 2020/03/03 2020/03/10"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [30] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 20 2020/03/06 2020/03/03 2020/03/08 2020/03/03 2020/03/07 2020/03/06 2020/03/06 2020/03/05 2020/03/07 2020/03/06 2020/03/01 2020/03/10 2020/03/01 2020/12/01 2020/03/09 2020/03/06 2020/03/04 2020/03/09 2020/03/11 2020/03/01"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [31] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 31 2020/03/07 2020/03/06 2020/09/15 2020/03/02 2020/03/06 2020/03/06 2020/03/07 2020/03/01 2020/03/07 2020/03/10 2020/03/06 2020/03/01 2020/03/04 2020/03/08 2020/03/07 2020/12/01 2020/03/11 2020/03/05 2020/03/07 2020/03/03 2020/03/09 2020/03/10 2020/03/08 2020/03/08 2020/03/06 2020/03/01 2020/03/06 2020/03/09 2020/03/03 2020/03/01 2020/03/05"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [32] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 16 2020/03/02 2020/03/08 2020/03/08 2020/03/01 2020/03/11 2020/03/11 2020/03/06 2020/03/06 2020/03/06 2020/03/05 2020/03/05 2020/03/10 2020/03/02 2020/03/04 2020/03/08 2020/03/03"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [33] "PMC7814551 /pmc/articles/PMC7814551/bin/12967_2020_2698_MOESM9_ESM.xls Hsapiens 25 2020/03/06 2020/03/01 2020/03/05 2020/03/09 2020/03/05 2020/03/10 2020/03/02 2020/03/11 2020/09/15 2020/03/06 2020/03/07 2020/03/08 2020/03/02 2020/03/02 2020/03/01 2020/03/03 2020/03/08 2020/03/10 2020/03/04 2020/03/02 2020/03/11 2020/03/06 2020/03/10 2020/12/01 2020/03/08"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [34] "PMC7844323 /pmc/articles/PMC7844323/bin/Table_2.XLSX Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [35] "PMC7844323 /pmc/articles/PMC7844323/bin/Table_2.XLSX Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [36] "PMC7826362 /pmc/articles/PMC7826362/bin/pnas.2008890118.sd02.xlsx Mmusculus 5 39692 39692 39692 39692 39692"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [37] "PMC7826362 /pmc/articles/PMC7826362/bin/pnas.2008890118.sd02.xlsx Mmusculus 1 39692"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [38] "PMC7826362 /pmc/articles/PMC7826362/bin/pnas.2008890118.sd03.xlsx Mmusculus 24 37500 39508 40787 39142 38047 39326 40422 37865 37316 39873 38777 38596 40057 38412 37681 39692 40603 40238 38231 37135 36951 36951 38961 41153"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [39] "PMC7812929 /pmc/articles/PMC7812929/bin/peerj-09-10671-s007.xlsx Hsapiens 30 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900 43900"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [40] "PMC7807721 /pmc/articles/PMC7807721/bin/13059_2020_2258_MOESM10_ESM.xlsx Dmelanogaster 1 37104"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [41] "PMC7807721 /pmc/articles/PMC7807721/bin/13059_2020_2258_MOESM10_ESM.xlsx Hsapiens 4 38231 40787 38231 39692"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [42] "PMC7838615 /pmc/articles/PMC7838615/bin/Table_1.XLSX Hsapiens 1 44075"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [43] "PMC7815943 /pmc/articles/PMC7815943/bin/mmc2.xlsx Mmusculus 6 44085 43891 44083 43893 43900 43894"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [44] "PMC7815943 /pmc/articles/PMC7815943/bin/mmc2.xlsx Mmusculus 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [45] "PMC7801399 /pmc/articles/PMC7801399/bin/41598_2020_79538_MOESM7_ESM.xlsx Mmusculus 22 43527 43527 43527 43527 43718 43712 43525 43525 43525 43718 43535 43535 43535 43535 43527 43525 43530 43525 43525 43712 43715 43532"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [46] "PMC7821388 /pmc/articles/PMC7821388/bin/DataSheet_1.xlsx Hsapiens 8 43892 43899 43895 43897 43892 43898 43896 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [47] "PMC7821388 /pmc/articles/PMC7821388/bin/DataSheet_2.xlsx Hsapiens 6 43892 43896 43892 43898 43891 43895"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [48] "PMC7820775 /pmc/articles/PMC7820775/bin/Table_1.xlsx Hsapiens 16 42248 37316 40057 37500 38961 38777 37135 37135 36951 39873 39508 40787 38231 38412 36951 39326"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [49] "PMC7819609 /pmc/articles/PMC7819609/bin/pgen.1009224.s002.xlsx Hsapiens 9 37316 37316 37316 40787 37316 40422 40422 41153 40422"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [50] "PMC7794586 /pmc/articles/PMC7794586/bin/41467_2020_20460_MOESM8_ESM.xlsx Hsapiens 2 43896 44088"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [51] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 5 39142 37226 40238 40057 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [52] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 13 39142 38047 36951 39692 37226 39873 37135 38231 40238 40057 37316 38961 39326"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [53] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 13 39142 38047 36951 39692 37226 39873 37135 38231 40238 40057 37316 38961 39326"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [54] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 14 39142 38047 36951 39692 37226 39873 37135 38231 40238 40057 37316 38961 39326 40787"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [55] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 13 39142 38047 36951 39692 37226 39873 37135 38231 40238 40057 37316 38961 39326"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [56] "PMC7794364 /pmc/articles/PMC7794364/bin/41540_2020_161_MOESM3_ESM.xlsx Hsapiens 1 40787"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [57] "PMC7791999 /pmc/articles/PMC7791999/bin/12864_2020_7334_MOESM2_ESM.xlsx Hsapiens 1 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [58] "PMC7791999 /pmc/articles/PMC7791999/bin/12864_2020_7334_MOESM2_ESM.xlsx Hsapiens 3 44085 44085 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [59] "PMC7791837 /pmc/articles/PMC7791837/bin/13059_2020_2208_MOESM3_ESM.xlsx Drerio 8 38412 39142 37500 37316 37681 39508 40422 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [60] "PMC7791837 /pmc/articles/PMC7791837/bin/13059_2020_2208_MOESM3_ESM.xlsx Drerio 16 39142 38777 42248 38961 37865 40603 36951 37316 39142 37500 38412 37681 39508 37316 40422 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [61] "PMC7792223 /pmc/articles/PMC7792223/bin/12864_2020_7329_MOESM23_ESM.xlsx Hsapiens 1 41153"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [62] "PMC7791882 /pmc/articles/PMC7791882/bin/12920_2020_853_MOESM1_ESM.xlsx Hsapiens 1 44166"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [63] "PMC7789526 /pmc/articles/PMC7789526/bin/12864_2020_7305_MOESM4_ESM.xlsx Ggallus 7 44082 44083 44081 43896 43896 43898 43894"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [64] "PMC7789526 /pmc/articles/PMC7789526/bin/12864_2020_7305_MOESM5_ESM.xlsx Ggallus 1 43354"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [65] "PMC7788918 /pmc/articles/PMC7788918/bin/13058_2020_1379_MOESM2_ESM.xlsx Hsapiens 4 42983 42984 42987 42980"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [66] "PMC7788918 /pmc/articles/PMC7788918/bin/13058_2020_1379_MOESM2_ESM.xlsx Hsapiens 4 42984 42980 42987 42983"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [67] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 44166 43892 44081 44082 43893 44084 43899 44083 43897 44085 43898 43896 44086 43894 44076 44089 43901 43891 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [68] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 43896 43898 44083 44076 44085 43897 43893 44084 43894 43901 44082 44166 43891 44086 44080 43892 43899 44089 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [69] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 43901 43894 43899 44080 44089 44086 44081 43892 43896 43898 44082 44085 44166 43893 44084 43891 44076 44083 43897"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [70] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 43894 43901 44085 43891 44086 44089 44082 43892 44166 44080 44081 44083 43899 43898 44076 44084 43893 43896 43897"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [71] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 43893 44080 43897 44076 44083 44081 43891 43894 43901 44082 43892 44084 44166 43898 44086 44085 44089 43899 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [72] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 44086 44081 44089 44082 43891 43892 43899 43898 43896 44084 43893 44076 44166 43897 43894 43901 44080 44083 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [73] "PMC7788893 /pmc/articles/PMC7788893/bin/12967_2020_2690_MOESM1_ESM.xlsx Hsapiens 19 44082 44089 43892 44084 43891 43898 44166 43899 44080 43896 44076 43901 43894 43897 44081 43893 44085 44083 44086"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [74] "PMC7788839 /pmc/articles/PMC7788839/bin/12935_2020_1707_MOESM2_ESM.xlsx Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [75] "PMC7788839 /pmc/articles/PMC7788839/bin/12935_2020_1707_MOESM3_ESM.xlsx Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [76] "PMC7788839 /pmc/articles/PMC7788839/bin/12935_2020_1707_MOESM7_ESM.xlsx Hsapiens 2 44075 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [77] "PMC7788826 /pmc/articles/PMC7788826/bin/12864_2020_7186_MOESM7_ESM.xlsx Hsapiens 1 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [78] "PMC7788777 /pmc/articles/PMC7788777/bin/13072_2020_376_MOESM12_ESM.xlsx Mmusculus 2 44089 44076"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [79] "PMC7788777 /pmc/articles/PMC7788777/bin/13072_2020_376_MOESM12_ESM.xlsx Mmusculus 1 44089"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [80] "PMC7788777 /pmc/articles/PMC7788777/bin/13072_2020_376_MOESM12_ESM.xlsx Mmusculus 2 44076 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [81] "PMC7788777 /pmc/articles/PMC7788777/bin/13072_2020_376_MOESM1_ESM.xlsx Rnorvegicus 23 43527 43535 43535 43525 43535 43531 43525 43527 43717 43535 43527 43717 43534 43532 43717 43719 43719 43527 43715 43525 43709 43711 43525"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [82] "PMC7788777 /pmc/articles/PMC7788777/bin/13072_2020_376_MOESM1_ESM.xlsx Rnorvegicus 7 43527 43532 43527 43531 43711 43527 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [83] "PMC7788743 /pmc/articles/PMC7788743/bin/12864_2020_7314_MOESM5_ESM.xlsx Hsapiens 3 44086 44075 44088"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [84] "PMC7786480 /pmc/articles/PMC7786480/bin/12885_2020_7728_MOESM6_ESM.xlsx Hsapiens 1 43358"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##  [85] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 2 38961 38231"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [86] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 2 40422 38596"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [87] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 1 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [88] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 3 38777 38231 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [89] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 3 41883 40238 39692"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [90] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 2 40422 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [91] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 3 40422 39326 40238"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [92] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 2 39142 36951"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [93] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 5 40787 40057 40238 39142 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [94] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 2 40057 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [95] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 3 40238 38777 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [96] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 3 39326 39142 40238"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [97] "PMC7812315 /pmc/articles/PMC7812315/bin/LSA-2020-00864_TableS1.xlsx Mmusculus 1 37681"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [98] "PMC7782737 /pmc/articles/PMC7782737/bin/41467_2020_20236_MOESM5_ESM.xlsx Hsapiens 6 43717 43717 43526 43525 43525 43525"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [99] "PMC7782737 /pmc/articles/PMC7782737/bin/41467_2020_20236_MOESM5_ESM.xlsx Hsapiens 11 43717 43528 43525 43525 43525 43525 43525 43535 43800 43800 43800"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [100] "PMC7782510 /pmc/articles/PMC7782510/bin/41467_2020_20282_MOESM6_ESM.xlsx Mmusculus 21 37865 39873 38412 38231 38961 39508 40057 37681 38777 36951 39326 39142 37316 37316 38596 37135 39692 37500 40603 40787 40422"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [101] "PMC7782510 /pmc/articles/PMC7782510/bin/41467_2020_20282_MOESM7_ESM.xlsx Mmusculus 13 37316 37316 40787 39326 38596 37681 37681 37500 39142 39142 39326 40057 37681"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [102] "PMC7780630 /pmc/articles/PMC7780630/bin/13059_2020_2230_MOESM1_ESM.xlsx Hsapiens 1 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [103] "PMC7797533 /pmc/articles/PMC7797533/bin/ijmsv18p0706s3.xlsx Hsapiens 14 40973 40972 40973 40974 40976 41160 41162 41162 41160 40977 41163 41163 40974 40971"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [104] "PMC7773562 /pmc/articles/PMC7773562/bin/mmc1.xlsx Hsapiens 1 37257"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [105] "PMC7811140 /pmc/articles/PMC7811140/bin/mmc2.xlsx Hsapiens 11 44079 44085 43893 44078 44078 44083 44083 44076 44081 43895 44084"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [106] "PMC7811140 /pmc/articles/PMC7811140/bin/mmc2.xlsx Hsapiens 5 44083 44166 43900 44078 43900"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [107] "PMC7811140 /pmc/articles/PMC7811140/bin/mmc4.xlsx Hsapiens 28 44089 44083 44082 44085 44081 43899 44079 44084 44076 44080 43892 43898 43897 43895 43893 43892 43896 44086 44078 43891 44075 43891 44077 44166 43901 43900 43894 44088"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [108] "PMC7811140 /pmc/articles/PMC7811140/bin/mmc4.xlsx Hsapiens 28 44088 43894 43900 43901 44166 44077 43891 43891 44075 44078 44086 43895 43897 44084 43893 43892 44080 43892 44081 44076 44089 43896 43898 44085 43899 44083 44082 44079"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [109] "PMC7793309 /pmc/articles/PMC7793309/bin/pgen.1009270.s015.xlsx Hsapiens 1 43526"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [110] "PMC7793309 /pmc/articles/PMC7793309/bin/pgen.1009270.s015.xlsx Ggallus 4 43713 43714 43717 43526"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [111] "PMC7793309 /pmc/articles/PMC7793309/bin/pgen.1009270.s016.xlsx Hsapiens 1 44086"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [112] "PMC7793258 /pmc/articles/PMC7793258/bin/pgen.1009235.s010.xlsx Dmelanogaster 1 44076"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [113] "PMC7793258 /pmc/articles/PMC7793258/bin/pgen.1009235.s010.xlsx Dmelanogaster 1 44075"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [114] "PMC7824480 /pmc/articles/PMC7824480/bin/cells-10-00025-s001.xlsx Hsapiens 27 43892 43891 44084 43897 43894 44076 44085 43891 43896 43901 43893 44082 44081 44088 44166 43898 43895 43899 44086 44075 44078 43900 44083 43892 44079 44077 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [115] "PMC7790417 /pmc/articles/PMC7790417/bin/pcbi.1008491.s010.xls Hsapiens 1 40972"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [116] "PMC7790417 /pmc/articles/PMC7790417/bin/pcbi.1008491.s010.xls Hsapiens 1 36950"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [117] "PMC7790417 /pmc/articles/PMC7790417/bin/pcbi.1008491.s010.xls Hsapiens 1 36950"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [118] "PMC7790417 /pmc/articles/PMC7790417/bin/pcbi.1008491.s014.xlsx Hsapiens 2 37865 38231"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [119] "PMC7790417 /pmc/articles/PMC7790417/bin/pcbi.1008491.s014.xlsx Hsapiens 1 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [120] "PMC7788095 /pmc/articles/PMC7788095/bin/mmc3.xlsx Hsapiens 1 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [121] "PMC7788095 /pmc/articles/PMC7788095/bin/mmc3.xlsx Hsapiens 1 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [122] "PMC7788095 /pmc/articles/PMC7788095/bin/mmc4.xlsx Hsapiens 1 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [123] "PMC7788095 /pmc/articles/PMC7788095/bin/mmc4.xlsx Hsapiens 1 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [124] "PMC7785587 /pmc/articles/PMC7785587/bin/Data_Sheet_1.xlsx Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [125] "PMC7785587 /pmc/articles/PMC7785587/bin/Data_Sheet_1.xlsx Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [126] "PMC7785587 /pmc/articles/PMC7785587/bin/Data_Sheet_1.xlsx Hsapiens 1 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [127] "PMC7757804 /pmc/articles/PMC7757804/bin/pntd.0008883.s010.xlsx Hsapiens 2 44077 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [128] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc2.xlsx Hsapiens 22 37135 38961 38961 37135 37135 37500 40057 40057 40057 40057 40057 40057 37135 39692 40057 38961 39326 40057 38961 37135 40057 37135"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [129] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc3.xlsx Hsapiens 26 37135 38961 38961 37135 40057 40057 37500 40057 40057 37135 40057 40057 38961 39326 37135 40057 38961 39692 37135 40057 37135 40057 37135 37135 37135 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [130] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc3.xlsx Hsapiens 3 38961 37135 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [131] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc3.xlsx Hsapiens 3 38961 37135 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [132] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc3.xlsx Hsapiens 1 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [133] "PMC7773550 /pmc/articles/PMC7773550/bin/mmc4.xlsx Hsapiens 3 44083 44083 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [134] "PMC7779551 /pmc/articles/PMC7779551/bin/Table_2.XLSX Mmusculus 1 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [135] "PMC7745987 zip/S5_Table_5.1.xlsx Hsapiens 12 43715 43526 43719 43530 43712 43527 43717 43530 43714 43715 43718 43714"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [136] "PMC7745987 zip/S5_Table_5.1.xlsx Hsapiens 1 43527"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [137] "PMC7745987 zip/S5_Table_5.1.xlsx Hsapiens 2 43717 43530"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [138] "PMC7745987 zip/S5_Table_5.1.xlsx Hsapiens 1 43719"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [139] "PMC7745987 zip/S5_Table_5.2.xlsx Hsapiens 2 43712 43710"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [140] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S1.xlsx Mmusculus 1 36951"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [141] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S3.xlsx Mmusculus 5 36892 37104 37469 37834 38200"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [142] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S3.xlsx Mmusculus 5 36892 37104 37469 37834 38200"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [143] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S4.xlsx Mmusculus 2 43352 43167"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [144] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S4.xlsx Mmusculus 2 43352 43167"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [145] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S4.xlsx Mmusculus 14 43353 43353 43168 43347 43169 43352 43352 43352 43352 43352 43354 43354 43167 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [146] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S4.xlsx Mmusculus 2 43353 43167"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [147] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S5.xlsx Mmusculus 18 43345 43161 43168 43351 43352 43352 43165 43348 43161 43162 43164 43166 43354 43357 43167 43350 43350 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [148] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S5.xlsx Mmusculus 18 43345 43161 43168 43351 43352 43352 43165 43348 43161 43162 43164 43166 43354 43357 43167 43350 43350 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [149] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S5.xlsx Mmusculus 18 43345 43161 43168 43351 43352 43352 43165 43348 43161 43162 43164 43166 43354 43357 43167 43350 43350 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [150] "PMC7744083 /pmc/articles/PMC7744083/bin/abc5629_Data_file_S5.xlsx Mmusculus 18 43345 43161 43168 43351 43352 43352 43165 43348 43161 43162 43164 43166 43354 43357 43167 43350 43350 43349"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [151] "PMC7773997 /pmc/articles/PMC7773997/bin/mBio.03044-20-sd001.xlsx Scerevisiae 1 44105"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [152] "PMC7773990 /pmc/articles/PMC7773990/bin/mBio.02664-20-sd001.xlsx Mmusculus 7 43532 43531 43719 43717 43530 43526 43710"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [153] "PMC7773990 /pmc/articles/PMC7773990/bin/mBio.02664-20-sd001.xlsx Mmusculus 4 43354 43345 43166 43165"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [154] "PMC7793715 /pmc/articles/PMC7793715/bin/Table_1.XLSX Hsapiens 8 43892 44086 44077 43892 44088 44075 43900 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [155] "PMC7793715 /pmc/articles/PMC7793715/bin/Table_1.XLSX Hsapiens 18 44080 43897 44083 44085 43895 43898 44089 44082 44084 44081 44079 43891 43891 44076 44166 43899 43893 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [156] "PMC7793715 /pmc/articles/PMC7793715/bin/Table_2.XLSX Hsapiens 1 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [157] "PMC7793715 /pmc/articles/PMC7793715/bin/Table_3.XLSX Hsapiens 26 43892 44086 44077 43892 44088 44075 43900 44078 43896 43893 43899 44166 44076 43891 43891 44079 44081 44084 44082 44089 43898 43895 44085 44083 43897 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [158] "PMC7758050 /pmc/articles/PMC7758050/bin/pbio.3000975.s010.xlsx Ggallus 1 42251"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [159] "PMC7782839 /pmc/articles/PMC7782839/bin/41416_2020_1178_MOESM3_ESM.xlsx Hsapiens 16 44078 44080 44075 43891 43892 43894 44081 44085 44079 44076 43893 43897 43895 44082 43899 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [160] "PMC7796900 /pmc/articles/PMC7796900/bin/mmc1.xlsx Hsapiens 28 44166 43891 43892 43891 43900 43901 43892 43893 43894 43895 43896 43897 43898 43899 44089 44075 44084 44085 44086 44088 44076 44077 44078 44079 44080 44081 44082 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [161] "PMC7796900 /pmc/articles/PMC7796900/bin/mmc1.xlsx Hsapiens 28 44166 43891 43892 43891 43900 43901 43892 43893 43894 43895 43896 43897 43898 43899 44089 44075 44084 44085 44086 44088 44076 44077 44078 44079 44080 44081 44082 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [162] "PMC7796900 /pmc/articles/PMC7796900/bin/mmc1.xlsx Hsapiens 28 44166 43891 43892 43891 43900 43901 43892 43893 43894 43895 43896 43897 43898 43899 44089 44075 44084 44085 44086 44088 44076 44077 44078 44079 44080 44081 44082 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [163] "PMC7796900 /pmc/articles/PMC7796900/bin/mmc1.xlsx Hsapiens 28 44166 43891 43892 43891 43900 43901 43892 43893 43894 43895 43896 43897 43898 43899 44089 44075 44084 44085 44086 44088 44076 44077 44078 44079 44080 44081 44082 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [164] "PMC7796900 /pmc/articles/PMC7796900/bin/mmc1.xlsx Hsapiens 28 44166 43891 43892 43891 43900 43901 43892 43893 43894 43895 43896 43897 43898 43899 44089 44075 44084 44085 44086 44088 44076 44077 44078 44079 44080 44081 44082 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [165] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S3.xlsx Hsapiens 99 40603 40238 40603 38047 38961 38596 38596 39692 38596 39873 38596 38596 38596 37226 38047 40787 38596 38047 38596 38961 38596 38596 40238 38047 38047 38596 39873 38596 37316 40603 38777 37226 38596 39873 38596 38596 37865 38596 38047 38231 38596 38047 40422 37226 37316 39692 38596 37226 38596 40057 38047 38596 38596 38596 38047 38596 38596 37226 38596 38047 38047 38047 37226 38596 38047 37226 38047 38047 38596 38047 38596 40422 38596 38596 38596 38047 38596 37865 38596 37865 38596 40422 38596 38047 40422 37226 37226 37226 37226 40603 38047 38596 39692 37226 40238 38047 38596 38047 37226"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [166] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S3.xlsx Hsapiens 27 38596 38047 37226 40603 37865 40238 40422 39692 38231 39873 37316 40057 36951 38961 37681 40787 36951 39508 38777 41883 41153 38412 37135 39326 39142 37500 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [167] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 2 38596 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [168] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 3 40057 38047 36951"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [169] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 2 38596 40787"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [170] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 38596"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [171] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [172] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 38596"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [173] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 2 38961 36951"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [174] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 3 40422 40057 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [175] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 38596"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [176] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [177] "PMC7781436 /pmc/articles/PMC7781436/bin/NIHMS1653552-supplement-Table_S5.xlsx Hsapiens 1 37500"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [178] "PMC7784491 /pmc/articles/PMC7784491/bin/supp_mcs.a005710_Supplemental_Table_1.xlsx Hsapiens 84 37226 36951 37316 36951 40238 40603 37316 37681 38047 38412 38777 39142 39508 39873 42248 37135 40422 40787 41153 41883 37500 37865 38231 38596 38961 39326 39692 40057 37226 36951 37316 36951 40238 40603 37316 37681 38047 38412 38777 39142 39508 39873 42248 37135 40422 40787 41153 41883 37500 37865 38231 38596 38961 39326 39692 40057 37226 36951 37316 36951 40238 40603 37316 37681 38047 38412 38777 39142 39508 39873 42248 37135 40422 40787 41153 41883 37500 37865 38231 38596 38961 39326 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [179] "PMC7803632 /pmc/articles/PMC7803632/bin/mmc2.xlsx Mmusculus 2 43534 43534"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [180] "PMC7803632 /pmc/articles/PMC7803632/bin/mmc2.xlsx Mmusculus 1 43533"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [181] "PMC7803632 /pmc/articles/PMC7803632/bin/mmc2.xlsx Mmusculus 1 43527"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [182] "PMC7803632 /pmc/articles/PMC7803632/bin/mmc2.xlsx Mmusculus 2 43535 43535"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [183] "PMC7803632 /pmc/articles/PMC7803632/bin/mmc2.xlsx Rnorvegicus 1 43528"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [184] "PMC7762488 /pmc/articles/PMC7762488/bin/aging-12-104062-s003.xlsx Hsapiens 4 43891 43891 43892 43892"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [185] "PMC7762488 /pmc/articles/PMC7762488/bin/aging-12-104062-s003.xlsx Hsapiens 2 43892 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [186] "PMC7746351 /pmc/articles/PMC7746351/bin/aging-12-103460-s003..xlsx Hsapiens 23 43709 43525 43714 43713 43529 43532 43533 43711 43525 43719 43526 43717 43800 43716 43527 43530 43715 43718 43723 43712 43531 43526 43710"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [187] "PMC7746351 /pmc/articles/PMC7746351/bin/aging-12-103460-s003..xlsx Hsapiens 23 43709 43714 43800 43527 43526 43525 43532 43525 43533 43711 43526 43715 43718 43719 43529 43717 43713 43723 43531 43716 43530 43710 43712"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [188] "PMC7746351 /pmc/articles/PMC7746351/bin/aging-12-103460-s003..xlsx Hsapiens 23 43527 43526 43525 43533 43709 43711 43800 43526 43713 43715 43718 43714 43532 43723 43530 43529 43525 43717 43719 43531 43716 43712 43710"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [189] "PMC7842189 /pmc/articles/PMC7842189/bin/NIHMS1647631-supplement-2.xlsx Mmusculus 8 42436 42438 42620 42437 42615 42623 42628 42439"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [190] "PMC7782095 /pmc/articles/PMC7782095/bin/MOL2-15-138-s003.xlsx Hsapiens 2 44166 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [191] "PMC7764503 /pmc/articles/PMC7764503/bin/vdaa151_suppl_supplementary_table_s3.xlsx Hsapiens 38 37316 38777 36951 39326 39692 40057 40787 40057 42248 40057 37226 37316 39692 38777 38777 38961 38412 38961 40787 38961 40422 37681 38777 40422 38231 37500 40787 39326 38961 36951 39508 38777 37316 39142 39142 38777 38231 37500"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [192] "PMC7774731 /pmc/articles/PMC7774731/bin/CAM4-9-9632-s001.xlsx Hsapiens 2 43530 43711"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [193] "PMC7790754 /pmc/articles/PMC7790754/bin/41388_2020_1523_MOESM2_ESM.xlsx Hsapiens 18 44080 44084 43900 44086 43895 43896 43899 44082 44089 44078 44076 43893 43898 43892 44166 44083 44077 43897"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [194] "PMC7759458 /pmc/articles/PMC7759458/bin/41586_2020_2853_MOESM10_ESM.xlsx Hsapiens 1 43899"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [195] "PMC7818422 /pmc/articles/PMC7818422/bin/MEC-30-193-s002.xlsx Athaliana 1 37347"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [196] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 40603 41153 39873 37135 39692 37316 36951 39508 38961 39142 41883 37681 40422 36951 37500 40238 38047 40057 38596 38231 38777 37865 38412 40787 37226 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [197] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 39873 40238 38596 38231 40603 37135 39508 40422 40057 36951 39142 37500 37316 37865 38412 38777 39692 41883 40787 36951 38961 37226 41153 37681 37316 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [198] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 39873 38596 40238 38231 36951 40422 37316 38412 39692 40057 38777 37135 39508 37226 36951 40603 38961 37865 38047 40787 37681 37316 39142 41153 41883 37500"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [199] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 39873 40238 38231 38596 37316 40057 39692 37135 40422 40787 37226 38777 40603 39142 38412 41153 36951 37500 37865 39508 38961 41883 37681 36951 38047 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [200] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 38596 40238 38231 40057 39873 39692 40422 37681 37226 37135 37316 38777 40603 40787 38412 37500 39508 41153 36951 38961 36951 37865 41883 39142 37316 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [201] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 40238 38231 39873 38412 40057 40422 38596 39692 37226 37135 37316 37500 40787 40603 38777 36951 39508 41883 37865 37681 36951 38961 41153 37316 39142 38047"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [202] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 37316 36951 38412 41153 37316 41883 38047 40603 39142 40057 40238 38961 38596 39692 36951 40422 37500 39873 38777 37135 37681 38231 37226 40787 39508 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [203] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 36951 37316 36951 37500 39142 38412 40603 38047 41153 41883 37681 37135 40057 40422 37226 39692 38777 38596 38961 39873 38231 40787 37865 39508 37316 40238"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [204] "PMC7116647 /pmc/articles/PMC7116647/bin/EMS84795-supplement-Supplementary_tables.xlsx Hsapiens 26 38412 36951 37316 40422 37500 38596 38047 40238 38961 39873 40787 40603 41883 41153 36951 37135 37316 37681 37226 39142 39508 39692 40057 38231 38777 37865"

In depth look at the errors

Let’s investigate the errors in more detail.

# By species
SPECIES <- sapply(strsplit(ERROR_GENELISTS," "),"[[",3)
table(SPECIES)
## SPECIES
##     Athaliana Dmelanogaster        Drerio       Ggallus      Hsapiens 
##             1             3             2             5           144 
##     Mmusculus   Rnorvegicus   Scerevisiae 
##            45             3             1
par(mar=c(5,12,4,2))
barplot(table(SPECIES),horiz=TRUE,las=1)

par(mar=c(5,5,4,2))

# Number of affected Excel files per paper
DIST <- table(sapply(strsplit(ERROR_GENELISTS," "),"[[",1))
DIST
## 
## PMC7116647 PMC7744083 PMC7745987 PMC7746351 PMC7757804 PMC7758050 PMC7759458 
##          9         11          5          3          1          1          1 
## PMC7762488 PMC7764503 PMC7773550 PMC7773562 PMC7773990 PMC7773997 PMC7774731 
##          2          1          6          1          2          1          1 
## PMC7779551 PMC7780630 PMC7781436 PMC7782095 PMC7782510 PMC7782737 PMC7782839 
##          1          1         13          1          2          2          1 
## PMC7784491 PMC7785587 PMC7786480 PMC7788095 PMC7788743 PMC7788777 PMC7788826 
##          1          3          1          4          1          5          1 
## PMC7788839 PMC7788893 PMC7788918 PMC7789526 PMC7790417 PMC7790754 PMC7791837 
##          3          7          2          2          5          1          2 
## PMC7791882 PMC7791999 PMC7792223 PMC7793258 PMC7793309 PMC7793715 PMC7794364 
##          1          2          1          2          3          4          6 
## PMC7794586 PMC7796900 PMC7797533 PMC7801399 PMC7803632 PMC7807721 PMC7811140 
##          1          5          1          1          5          2          4 
## PMC7812315 PMC7812929 PMC7814551 PMC7815088 PMC7815943 PMC7817693 PMC7818422 
##         13          1         23          1          2          1          1 
## PMC7819609 PMC7820775 PMC7821388 PMC7821633 PMC7822813 PMC7824480 PMC7825165 
##          1          1          2          2          2          1          1 
## PMC7826362 PMC7836161 PMC7838615 PMC7842022 PMC7842189 PMC7844323 
##          3          1          1          2          1          2
summary(as.numeric(DIST))
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##   1.000   1.000   2.000   2.957   3.000  23.000
hist(DIST,main="Number of affected Excel files per paper")

# PMC Articles with the most errors
DIST_DF <- as.data.frame(DIST)
DIST_DF <- DIST_DF[order(-DIST_DF$Freq),,drop=FALSE]
head(DIST_DF,20)
##          Var1 Freq
## 52 PMC7814551   23
## 17 PMC7781436   13
## 50 PMC7812315   13
## 2  PMC7744083   11
## 1  PMC7116647    9
## 30 PMC7788893    7
## 10 PMC7773550    6
## 42 PMC7794364    6
## 3  PMC7745987    5
## 27 PMC7788777    5
## 33 PMC7790417    5
## 44 PMC7796900    5
## 47 PMC7803632    5
## 25 PMC7788095    4
## 41 PMC7793715    4
## 49 PMC7811140    4
## 4  PMC7746351    3
## 23 PMC7785587    3
## 29 PMC7788839    3
## 40 PMC7793309    3
MOST_ERR_FILES = as.character(DIST_DF[1,1])
MOST_ERR_FILES
## [1] "PMC7814551"
# Number of errors per paper
NERR <- as.numeric(sapply(strsplit(ERROR_GENELISTS," "),"[[",4))
names(NERR) <- sapply(strsplit(ERROR_GENELISTS," "),"[[",1)
NERR <-tapply(NERR, names(NERR), sum)
NERR
## PMC7116647 PMC7744083 PMC7745987 PMC7746351 PMC7757804 PMC7758050 PMC7759458 
##        234        103         18         69          2          1          1 
## PMC7762488 PMC7764503 PMC7773550 PMC7773562 PMC7773990 PMC7773997 PMC7774731 
##          6         38         58          1         11          1          2 
## PMC7779551 PMC7780630 PMC7781436 PMC7782095 PMC7782510 PMC7782737 PMC7782839 
##          1          1        144          2         34         17         16 
## PMC7784491 PMC7785587 PMC7786480 PMC7788095 PMC7788743 PMC7788777 PMC7788826 
##         84          3          1          4          3         35          1 
## PMC7788839 PMC7788893 PMC7788918 PMC7789526 PMC7790417 PMC7790754 PMC7791837 
##          4        133          8          8          6         18         24 
## PMC7791882 PMC7791999 PMC7792223 PMC7793258 PMC7793309 PMC7793715 PMC7794364 
##          1          4          1          2          6         53         59 
## PMC7794586 PMC7796900 PMC7797533 PMC7801399 PMC7803632 PMC7807721 PMC7811140 
##          2        140         14         22          7          5         72 
## PMC7812315 PMC7812929 PMC7814551 PMC7815088 PMC7815943 PMC7817693 PMC7818422 
##         32         30        310          4          7          1          1 
## PMC7819609 PMC7820775 PMC7821388 PMC7821633 PMC7822813 PMC7824480 PMC7825165 
##          9         16         14        327          5         27          2 
## PMC7826362 PMC7836161 PMC7838615 PMC7842022 PMC7842189 PMC7844323 
##         30          5          1         28          8          2
hist(NERR,main="number of errors per PMC article")

NERR_DF <- as.data.frame(NERR)
NERR_DF <- NERR_DF[order(-NERR_DF$NERR),,drop=FALSE]
head(NERR_DF,20)
##            NERR
## PMC7821633  327
## PMC7814551  310
## PMC7116647  234
## PMC7781436  144
## PMC7796900  140
## PMC7788893  133
## PMC7744083  103
## PMC7784491   84
## PMC7811140   72
## PMC7746351   69
## PMC7794364   59
## PMC7773550   58
## PMC7793715   53
## PMC7764503   38
## PMC7788777   35
## PMC7782510   34
## PMC7812315   32
## PMC7812929   30
## PMC7826362   30
## PMC7842022   28
MOST_ERR = rownames(NERR_DF)[1]
MOST_ERR
## [1] "PMC7821633"

Journals affected

GENELIST_ERROR_ARTICLES <- gsub("PMC","",GENELIST_ERROR_ARTICLES)

### JSON PARSING is more reliable than XML
ARTICLES <- esummary( GENELIST_ERROR_ARTICLES , db="pmc" , retmode = "json"  )
ARTICLE_DATA <- reutils::content(ARTICLES,as= "parsed")
ARTICLE_DATA <- ARTICLE_DATA$result
ARTICLE_DATA <- ARTICLE_DATA[2:length(ARTICLE_DATA)]
JOURNALS <- unlist(lapply(ARTICLE_DATA,function(x) {x$fulljournalname} ))
JOURNALS_TABLE <- table(JOURNALS)
JOURNALS_TABLE <- JOURNALS_TABLE[order(-JOURNALS_TABLE)]

length(JOURNALS_TABLE)
## [1] 47
par(mar=c(5,25,4,2))
barplot(head(JOURNALS_TABLE,10), horiz=TRUE, las=1, 
  xlab="Articles with gene name errors in supp files",
  main="Top journals this month")

Journal of the month winner

Congrats to our Journal of the Month winner!

JOURNAL_WINNER <- names(head(JOURNALS_TABLE,1))
JOURNAL_WINNER
## [1] "BMC Genomics"

Paper of the month winners

There are two categories:

Sometimes, one paper can win both categories. Congrats to our winners.

Paper with most files affected

MOST_ERR_FILES <- gsub("PMC","",MOST_ERR_FILES)
ARTICLES <- esummary( MOST_ERR_FILES , db="pmc" , retmode = "json"  )
ARTICLE_DATA <- reutils::content(ARTICLES,as= "parsed")
ARTICLE_DATA <- ARTICLE_DATA[2]
ARTICLE_DATA
## $result
## $result$uids
## [1] "7814551"
## 
## $result$`7814551`
## $result$`7814551`$uid
## [1] "7814551"
## 
## $result$`7814551`$pubdate
## [1] "2021 Jan 19"
## 
## $result$`7814551`$epubdate
## [1] "2021 Jan 19"
## 
## $result$`7814551`$printpubdate
## [1] ""
## 
## $result$`7814551`$source
## [1] "J Transl Med"
## 
## $result$`7814551`$authors
##      name authtype
## 1  Zhao X   Author
## 2 Zhang L   Author
## 3  Wang J   Author
## 4 Zhang M   Author
## 5  Song Z   Author
## 6    Ni B   Author
## 7   You Y   Author
## 
## $result$`7814551`$title
## [1] "Identification of key biomarkers and immune infiltration in systemic lupus erythematosus by integrated bioinformatics analysis"
## 
## $result$`7814551`$volume
## [1] "19"
## 
## $result$`7814551`$issue
## [1] ""
## 
## $result$`7814551`$pages
## [1] "35"
## 
## $result$`7814551`$articleids
##   idtype                      value
## 1   pmid                   33468161
## 2    doi 10.1186/s12967-020-02698-x
## 3  pmcid                 PMC7814551
## 
## $result$`7814551`$fulljournalname
## [1] "Journal of Translational Medicine"
## 
## $result$`7814551`$sortdate
## [1] "2021/01/19 00:00"
## 
## $result$`7814551`$pmclivedate
## [1] "2021/01/19"

Paper with most date conversions

MOST_ERR <- gsub("PMC","",MOST_ERR)
ARTICLE_DATA <- esummary(MOST_ERR,db = "pmc" , retmode = "json" )
ARTICLE_DATA <- reutils::content(ARTICLE_DATA,as= "parsed")
ARTICLE_DATA
## $header
## $header$type
## [1] "esummary"
## 
## $header$version
## [1] "0.3"
## 
## 
## $result
## $result$uids
## [1] "7821633"
## 
## $result$`7821633`
## $result$`7821633`$uid
## [1] "7821633"
## 
## $result$`7821633`$pubdate
## [1] "2021 Jan 22"
## 
## $result$`7821633`$epubdate
## [1] "2021 Jan 22"
## 
## $result$`7821633`$printpubdate
## [1] ""
## 
## $result$`7821633`$source
## [1] "BMC Mol Cell Biol"
## 
## $result$`7821633`$authors
##     name authtype
## 1 Shen P   Author
## 2   Xu A   Author
## 3  Hou Y   Author
## 4 Wang H   Author
## 5  Gao C   Author
## 6   He F   Author
## 7 Yang D   Author
## 
## $result$`7821633`$title
## [1] "Conserved paradoxical relationships among the evolutionary, structural and expressional features of KRAB zinc-finger proteins reveal their special functional characteristics"
## 
## $result$`7821633`$volume
## [1] "22"
## 
## $result$`7821633`$issue
## [1] ""
## 
## $result$`7821633`$pages
## [1] "7"
## 
## $result$`7821633`$articleids
##   idtype                      value
## 1   pmid                   33482715
## 2    doi 10.1186/s12860-021-00346-w
## 3  pmcid                 PMC7821633
## 
## $result$`7821633`$fulljournalname
## [1] "BMC Molecular and Cell Biology"
## 
## $result$`7821633`$sortdate
## [1] "2021/01/22 00:00"
## 
## $result$`7821633`$pmclivedate
## [1] "2021/01/25"

Trend info

TODO: To plot the trend over the past 6 months.

References

  1. Zeeberg, B.R., Riss, J., Kane, D.W. et al. Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics. BMC Bioinformatics 5, 80 (2004). https://doi.org/10.1186/1471-2105-5-80

  2. Ziemann, M., Eren, Y. & El-Osta, A. Gene name errors are widespread in the scientific literature. Genome Biol 17, 177 (2016). https://doi.org/10.1186/s13059-016-1044-7

SessionInfo

sessionInfo()
## R version 3.6.3 (2020-02-29)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.2 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
## 
## locale:
##  [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8    
##  [5] LC_MONETARY=en_AU.UTF-8    LC_MESSAGES=en_AU.UTF-8   
##  [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
## [1] jsonlite_1.7.2 XML_3.99-0.3   readxl_1.3.1   reutils_0.2.3  xml2_1.3.2    
## 
## loaded via a namespace (and not attached):
##  [1] Rcpp_1.0.6        knitr_1.31        magrittr_2.0.1    R6_2.5.0         
##  [5] rlang_0.4.10      highr_0.8         stringr_1.4.0     tools_3.6.3      
##  [9] xfun_0.22         jquerylib_0.1.3   htmltools_0.5.1.1 yaml_2.2.1       
## [13] digest_0.6.27     assertthat_0.2.1  sass_0.3.1        bitops_1.0-6     
## [17] RCurl_1.98-1.3    evaluate_0.14     rmarkdown_2.7     stringi_1.5.3    
## [21] compiler_3.6.3    bslib_0.2.4       cellranger_1.1.0