Source: https://github.com/markziemann/GeneNameErrors2020

View the reports: http://ziemann-lab.net/public/gene_name_errors/

Intro

Gene name errors result when data are imported improperly into MS Excel and other spreadsheet programs (Zeeberg et al, 2004). Certain gene names like MARCH3, SEPT2 and DEC1 are converted into date format. These errors are surprisingly common in supplementary data files in the field of genomics (Ziemann et al, 2016). This could be considered a small error because it only affects a small number of genes, however it is symptomtic of poor data processing methods. The purpose of this script is to identify gene name errors present in supplementary files of PubMed Central articles in the previous month.

library("XML")
library("jsonlite")
library("xml2")
library("reutils")
library("readxl")
library("RCurl")

Get PMC IDs

Here I will be getting PubMed Central IDs for the previous month.

Start with figuring out the date to search PubMed Central.

CURRENT_MONTH=format(Sys.time(), "%m")
CURRENT_YEAR=format(Sys.time(), "%Y")

if (CURRENT_MONTH == "01") {
  PREV_YEAR=as.character(as.numeric(format(Sys.time(), "%Y"))-1)
  PREV_MONTH="12"
} else {
  PREV_YEAR=CURRENT_YEAR
  PREV_MONTH=as.character(as.numeric(format(Sys.time(), "%m"))-1)
}

DATE=paste(PREV_YEAR,"/",PREV_MONTH,sep="")
DATE
## [1] "2022/10"

Let’s see how many PMC IDs we have in the past month.

QUERY ='((genom*[Abstract]))'

ESEARCH_RES <- esearch(term=QUERY, db = "pmc", rettype = "uilist", retmode = "xml", retstart = 0, 
  retmax = 5000000, usehistory = TRUE, webenv = NULL, querykey = NULL, sort = NULL, field = NULL, 
  datetype = NULL, reldate = NULL, 
  mindate = paste(DATE,"/1",sep="") , maxdate = paste(DATE,"/31",sep=""))

pmc <- efetch(ESEARCH_RES,retmode="text",rettype="uilist",outfile="pmcids.txt")
## Retrieving UIDs 1 to 500
## Retrieving UIDs 501 to 1000
## Retrieving UIDs 1001 to 1500
## Retrieving UIDs 1501 to 2000
## Retrieving UIDs 2001 to 2500
## Retrieving UIDs 2501 to 3000
## Retrieving UIDs 3001 to 3500
## Retrieving UIDs 3501 to 4000
pmc <- read.table(pmc)
pmc <- paste("PMC",pmc$V1,sep="")
NUM_ARTICLES=length(pmc)
NUM_ARTICLES
## [1] 3778
writeLines(pmc,con="pmc.txt")

Run the screen

Now run the bash script. Note that false positives can occur (~1.5%) and these results have not been verified by a human.

Here are some definitions:

  • NUM_XLS = Number of supplementary Excel files in this set of PMC articles.

  • NUM_XLS_ARTICLES = Number of articles matching the PubMed Central search which have supplementary Excel files.

  • GENELISTS = The gene lists found in the Excel files. Each Excel file is counted once even it has multiple gene lists.

  • NUM_GENELISTS = The number of Excel files with gene lists.

  • NUM_GENELIST_ARTICLES = The number of PMC articles with supplementary Excel gene lists.

  • ERROR_GENELISTS = Files suspected to contain gene name errors. The dates and five-digit numbers indicate transmogrified gene names.

  • NUM_ERROR_GENELISTS = Number of Excel gene lists with errors.

  • NUM_ERROR_GENELIST_ARTICLES = Number of articles with supplementary Excel gene name errors.

  • ERROR_PROPORTION = This is the proportion of articles with Excel gene lists that have errors.

system("./gene_names.sh pmc.txt")
results <- readLines("results.txt")

XLS <- results[grep("XLS",results,ignore.case=TRUE)]
NUM_XLS = length(XLS)
NUM_XLS
## [1] 5135
NUM_XLS_ARTICLES = length(unique(sapply(strsplit(XLS," "),"[[",1)))
NUM_XLS_ARTICLES
## [1] 895
GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>2]
#GENELISTS

NUM_GENELISTS <- length(unique(sapply(strsplit(GENELISTS," "),"[[",2)))
NUM_GENELISTS
## [1] 657
NUM_GENELIST_ARTICLES <- length(unique(sapply(strsplit(GENELISTS," "),"[[",1)))
NUM_GENELIST_ARTICLES
## [1] 330
ERROR_GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>3]
#ERROR_GENELISTS

NUM_ERROR_GENELISTS = length(ERROR_GENELISTS)
NUM_ERROR_GENELISTS
## [1] 241
GENELIST_ERROR_ARTICLES <- unique(sapply(strsplit(ERROR_GENELISTS," "),"[[",1))
GENELIST_ERROR_ARTICLES
##  [1] "PMC9617917" "PMC9617877" "PMC9617049" "PMC9616860" "PMC9606253"
##  [6] "PMC9605692" "PMC9586478" "PMC9584951" "PMC9584949" "PMC9584885"
## [11] "PMC9581932" "PMC9612055" "PMC9597788" "PMC9576059" "PMC9571470"
## [16] "PMC9575684" "PMC9568502" "PMC9596731" "PMC9605867" "PMC9584372"
## [21] "PMC9550834" "PMC9570186" "PMC9548106" "PMC9585224" "PMC9547065"
## [26] "PMC9547055" "PMC9546890" "PMC9544324" "PMC9586874" "PMC9582937"
## [31] "PMC9561262" "PMC9585938" "PMC9579367" "PMC9579347" "PMC9579318"
## [36] "PMC9558508" "PMC9535881" "PMC9534852" "PMC9532393" "PMC9531459"
## [41] "PMC9574330" "PMC9561881" "PMC9561266" "PMC9531352" "PMC9578707"
## [46] "PMC9561824" "PMC9546626" "PMC9524707" "PMC9523919" "PMC9570865"
## [51] "PMC9518689" "PMC9552960" "PMC9551187" "PMC9550876" "PMC9549141"
## [56] "PMC9549113" "PMC9548632" "PMC9548593" "PMC9548527" "PMC9550651"
## [61] "PMC9558549" "PMC9532972" "PMC9529142" "PMC9534044" "PMC9531689"
## [66] "PMC9531163" "PMC9530606" "PMC9530462" "PMC9530347" "PMC9482892"
## [71] "PMC9524857" "PMC9523398" "PMC9523360" "PMC9508470" "PMC9560165"
## [76] "PMC9483806" "PMC9512470" "PMC9494239" "PMC9613476" "PMC9584034"
## [81] "PMC9581494" "PMC9545373" "PMC9546057" "PMC9559112" "PMC9546433"
## [86] "PMC9596373" "PMC9545044"
NUM_ERROR_GENELIST_ARTICLES <- length(GENELIST_ERROR_ARTICLES) 
NUM_ERROR_GENELIST_ARTICLES
## [1] 87
ERROR_PROPORTION = NUM_ERROR_GENELIST_ARTICLES / NUM_GENELIST_ARTICLES
ERROR_PROPORTION
## [1] 0.2636364

Look at the errors detected

Here you can have a look at all the gene lists detected in the past month, as well as those with errors. The dates are obvious errors, these are commonly dates in September, March, December and October. The five-digit numbers represent dates as they are encoded in the Excel internal format. The five digit number is the number of days since 1900. If you were to take these numbers and put them into Excel and format the cells as dates, then these will also mostly map to dates in September, March, December and October.

#GENELISTS

ERROR_GENELISTS
##   [1] "PMC9617917 PMC_DL/PMC9617917/supplementaryfiles/41598_2022_23268_MOESM2_ESM.xls Hsapiens 8 44445 44441 44261 44446 44263 44443 44260 44257"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [2] "PMC9617877 PMC_DL/PMC9617877/supplementaryfiles/41467_2022_34179_MOESM3_ESM.xlsx Hsapiens 3 43891 43891 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##   [3] "PMC9617049 PMC_DL/PMC9617049/supplementaryfiles/41467_2022_34111_MOESM4_ESM.xlsx Hsapiens 25 44256 44263 44262 44445 44446 44266 44453 44443 44441 44260 44449 44264 44447 44440 44451 44448 44261 44531 44444 44259 44442 44257 44258 44450 44265"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##   [4] "PMC9617049 PMC_DL/PMC9617049/supplementaryfiles/41467_2022_34111_MOESM3_ESM.xlsx Hsapiens 81 44075 43892 44088 43896 44080 44077 43900 43892 43891 44081 44084 44086 44081 43891 44088 44078 43897 44085 44085 43893 44166 44086 43898 44076 44086 44082 44082 44080 43896 44079 43899 44079 44077 43899 43894 43895 43896 43900 43900 44084 44080 44077 43891 43899 44088 44081 43894 43894 43898 44085 44082 43891 43893 44078 44083 43897 44075 44083 44078 43893 43895 43892 43897 44166 43898 44076 43892 44083 44084 44076 44075 43901 44166 43901 43892 43901 43891 44079 43892 43895 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##   [5] "PMC9617049 PMC_DL/PMC9617049/supplementaryfiles/41467_2022_34111_MOESM3_ESM.xlsx Hsapiens 81 43901 43891 43896 44081 44086 43894 44075 44082 43896 43892 43899 43893 44079 43892 43891 43901 44078 43896 44076 43892 43891 43899 44083 44076 44084 44166 44075 44084 44076 44081 44080 43892 44082 44075 44085 44078 43895 44086 43893 44083 44081 43901 43899 44077 43898 44166 44088 43900 44079 43898 44078 43895 44084 44088 43892 44088 43894 43892 44085 44085 44166 43897 43895 43898 43894 44079 44080 43891 44077 43897 44086 43891 43900 44080 44082 43893 44077 43897 43900 43891 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##   [6] "PMC9616860 PMC_DL/PMC9616860/supplementaryfiles/41467_2022_34078_MOESM4_ESM.xlsx Hsapiens 29 43895 43896 44079 44082 43892 43891 44084 44078 43897 43900 44166 43901 44075 43893 44088 44081 44075 44086 43892 43899 44077 43898 44076 43891 44083 44085 44080 44089 43894"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [7] "PMC9616860 PMC_DL/PMC9616860/supplementaryfiles/41467_2022_34078_MOESM5_ESM.xlsx Mmusculus 15 44085 44078 43897 43892 43898 43893 44075 43892 43895 44082 44080 43896 44083 44081 44076"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##   [8] "PMC9616860 PMC_DL/PMC9616860/supplementaryfiles/41467_2022_34078_MOESM6_ESM.xlsx Mmusculus 18 44083 43892 43898 43895 43893 44081 44075 44076 44082 43892 43899 44084 43896 43897 43891 44085 44080 44079"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##   [9] "PMC9616860 PMC_DL/PMC9616860/supplementaryfiles/41467_2022_34078_MOESM8_ESM.xlsx Mmusculus 18 44082 44075 44083 44084 43891 43897 44076 43898 44089 43892 43895 44079 44081 43892 43893 44085 44080 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [10] "PMC9616860 PMC_DL/PMC9616860/supplementaryfiles/41467_2022_34078_MOESM7_ESM.xlsx Mmusculus 2 43897 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [11] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM10_ESM.xlsx Mmusculus 22 43894 43900 44083 43901 44079 43893 43901 43897 44081 43894 43892 43892 44084 44082 43901 43896 43892 43893 43897 44085 43891 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [12] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM9_ESM.xlsx Mmusculus 8 43716 43717 43715 43715 43716 43528 43712 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [13] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM4_ESM.xlsx Mmusculus 16 43346 43354 43163 43347 43348 43351 43168 43160 43165 43162 43352 43169 43349 43353 43161 43161"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [14] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM5_ESM.xlsx Mmusculus 13 44085 44077 43894 44078 44079 43891 43896 44082 43899 44080 43900 44083 43901"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [15] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM5_ESM.xlsx Mmusculus 17 43346 43351 43348 43163 43168 43162 43160 43347 43165 43349 43354 43353 43170 43169 43161 43350 43352"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [16] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM12_ESM.xlsx Mmusculus 128 43891 43891 43891 44085 43891 43891 44080 44076 43891 43891 44080 44080 43891 43893 43891 43891 43894 44083 43891 43891 43899 44083 44083 43891 43894 43900 44082 43894 44082 43894 44079 43900 44083 44082 44084 44083 44083 43894 43894 43894 43892 43893 44084 44083 43893 43891 43901 43896 43900 43896 43891 43891 44084 43891 43901 43891 43891 43892 43891 43901 43891 43891 43894 43891 43901 43891 44084 43893 44083 43892 44083 43896 43891 43893 43892 44086 43893 43891 43891 43891 43891 43896 43900 43898 43893 44085 43891 43898 44086 43893 44081 43893 44075 44075 44084 43893 43896 44085 43891 43901 44076 43899 44077 43894 44081 44081 44088 44083 44075 43892 44085 44083 44083 44083 44077 43892 43892 44086 43892 43898 43892 43900 43896 44083 44082 43892 43891 43891"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [17] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM11_ESM.xlsx Mmusculus 14 43525 43711 43528 43525 43525 43718 43528 43713 43532 43527 43717 43715 43716 43711"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [18] "PMC9606253 PMC_DL/PMC9606253/supplementaryfiles/41467_2022_34200_MOESM11_ESM.xlsx Mmusculus 11 43528 43532 43535 43525 43717 43525 43525 43717 43717 43532 43527"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [19] "PMC9605692 PMC_DL/PMC9605692/supplementaryfiles/elife-78345-supp2.xlsx Hsapiens 7 44809 44621 44625 44811 44810 44621 44628"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [20] "PMC9586478 zip/sciadv.abq8297_table_s3.xlsx Hsapiens 16 38200 37834 40422 39326 37469 39692 37104 38596 37500 40787 38961 40057 37135 38231 41153 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [21] "PMC9584951 PMC_DL/PMC9584951/supplementaryfiles/41598_2022_21473_MOESM5_ESM.xlsx Hsapiens 3 44896 44623 44624"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [22] "PMC9584949 PMC_DL/PMC9584949/supplementaryfiles/41467_2022_33945_MOESM5_ESM.xlsx Mmusculus 14 38596 38231 39326 37135 42248 38777 37316 37500 38047 39508 40422 38412 39692 36951"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [23] "PMC9584885 PMC_DL/PMC9584885/supplementaryfiles/41467_2022_33385_MOESM6_ESM.xlsx Hsapiens 360 40057 38412 38412 37500 40057 37135 40057 40057 40057 38961 40057 37135 37135 40787 37500 40787 40057 37500 40422 38961 38961 38961 38961 38961 38961 38961 38961 40787 40787 39692 39692 37500 37500 37500 37500 37500 37500 37500 37500 37135 37135 37135 37135 37135 37135 37135 37135 37135 40057 40057 40057 40057 40057 40422 40422 40422 40422 38412 38412 38412 38961 40057 38961 37135 38412 37135 40057 37135 40057 38961 38961 38961 38961 38961 38961 38961 40787 40787 40787 40787 39692 39692 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37135 37135 37135 37135 37135 37135 37135 37135 37135 40057 40057 40057 40057 40057 40057 40057 40057 40057 40422 40422 40422 40422 40422 38412 38412 38412 38412 40057 38961 40422 40057 37500 38961 37135 40422 40057 40787 40422 37135 37135 38412 39692 39692 37135 40057 38961 40057 40057 40057 37500 37500 40787 37500 38412 37135 37500 37500 37500 37500 40057 38961 38961 40787 37135 40057 40422 40422 40787 37135 38961 38412 38961 38961 38961 37500 37500 37500 37135 37135 37135 37135 37135 40057 40057 40057 38412 38412 40057 37135 38412 40422 40057 38961 38961 38961 38961 38961 38961 38961 38961 38961 40787 40787 40787 40787 39692 39692 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37135 37135 37135 37135 37135 37135 37135 37135 37135 37135 37135 40057 40057 40057 40057 40057 40057 40057 40057 40057 40057 40422 40422 40422 40422 38412 38412 38412 38412 38961 37135 37500 40057 40787 40057 40057 38961 38412 40057 40787 38961 38412 37500 37135 40057 38961 40057 38412 37135 37135 38961 38961 40422 37500 38961 40422 38961 40057 40057 38961 37500 40422 37135 37135 37500 38412 40787 37500 40422 40057 37135 37135 37500 37135 40057 40057 37500 40787 37500 40057 40422 39692 39692 37135 37135 37135 37500 38412 37500 38961 38961 38961 38961 38961 38961 38961 38961 38961 40787 40787 40787 40787 39692 39692 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37500 37135 37135 37135 37135 37135 37135 37135 37135 37135 37135 37135 37135 40057 40057 40057 40057 40057 40057 40057 40057 40057 40057 40057 40057 40422 40422 40422 40422 40422 38412 38412 38412 38412 38412"
##  [24] "PMC9581932 PMC_DL/PMC9581932/supplementaryfiles/41467_2022_33904_MOESM4_ESM.xlsx Scerevisiae 1 41183"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [25] "PMC9581932 PMC_DL/PMC9581932/supplementaryfiles/41467_2022_33904_MOESM4_ESM.xlsx Scerevisiae 1 44470"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [26] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 17 44448 44447 44264 44445 44262 44260 44443 44440 44442 44263 44450 44257 44441 44446 44261 44258 44444"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [27] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 1 44448"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [28] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 17 44258 44443 44257 44263 44264 44448 44262 44440 44445 44446 44450 44442 44444 44447 44260 44441 44261"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [29] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 3 44258 44443 44257"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [30] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 1 44448"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [31] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 17 44257 44443 44258 44440 44448 44264 44262 44263 44450 44445 44447 44261 44444 44446 44441 44260 44442"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [32] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 3 44257 44443 44258"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [33] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S3-RNA-seq_SAHA_DEGs-.xlsx Hsapiens 2 44440 44448"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
##  [34] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 17 43898 44085 44081 44076 43896 43893 44077 44082 44080 43895 44079 44075 44083 43892 44078 43899 43897"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [35] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 17 43893 44077 44079 44083 44080 43896 43897 44085 44075 43895 43892 43899 44082 44078 44076 43898 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [36] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 3 43893 44079 44083"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [37] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 17 43898 43897 44081 44083 43895 43896 44079 43892 43893 44080 43899 44077 44075 44076 44078 44082 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [38] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 5 43893 44083 44079 43897 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [39] "PMC9612055 zip/Supplemental_Tables_S1-S3/Supplementary_Table_S1-RNA-seq_EPH_DEGs-.xlsx Hsapiens 1 43898"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##  [40] "PMC9597788 zip/Table_S3.xlsx Ggallus 21 44262 44259 44256 44258 44260 44262 44262 44262 44263 44263 44264 44258 44257 44262 44262 44262 44262 44265 44261 44266 44262"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [41] "PMC9576059 PMC_DL/PMC9576059/supplementaryfiles/pone.0272368.s003.xlsx Hsapiens 2 37865 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [42] "PMC9571470 PMC_DL/PMC9571470/supplementaryfiles/12885_2022_10155_MOESM1_ESM.xlsx Hsapiens 26 44531 44265 44266 44256 44257 44258 44259 44260 44261 44262 44263 44264 44454 44449 44450 44451 44453 44440 44441 44442 44443 44444 44445 44446 44447 44448"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [43] "PMC9575684 PMC_DL/PMC9575684/supplementaryfiles/peerj-10-14166-s006.xlsx Athaliana 4 44654 44837 44654 44654"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [44] "PMC9568502 PMC_DL/PMC9568502/supplementaryfiles/41598_2022_20939_MOESM13_ESM.xlsx Hsapiens 74 43891 43891 43894 43897 43894 43894 43894 43897 43897 44084 44076 43894 43894 44084 44084 43891 43891 43891 43891 43891 43891 43891 43891 43896 43896 44081 44166 44166 43895 43898 43898 43899 44086 44086 44086 44086 44086 44086 44086 44086 44086 44086 44078 44083 44083 43900 44078 44083 44083 44083 44083 44083 44083 44083 44083 44083 43900 44083 44083 44083 44083 44083 44083 44083 44083 44083 44083 43892 43892 44077 44077 44080 44080 44080"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [45] "PMC9568502 PMC_DL/PMC9568502/supplementaryfiles/41598_2022_20939_MOESM12_ESM.xlsx Hsapiens 68 43891 43892 43891 43891 43891 43892 43891 44089 43894 43897 43897 43894 43894 43894 43894 43894 43897 43894 43894 44084 44084 43891 43891 44085 44085 44085 44085 43891 43891 44085 43901 43893 43896 43893 43893 44081 44166 44166 43899 43899 44086 44086 44086 44086 44086 44086 44086 44083 44083 44083 44083 44083 44083 44083 44083 44083 44083 43900 44083 44083 44083 44083 44083 44083 44083 43892 43892 44077"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [46] "PMC9596731 PMC_DL/PMC9596731/supplementaryfiles/mmc2.xlsx Mmusculus 5 44627 44815 44808 44812 44813"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [47] "PMC9605867 PMC_DL/PMC9605867/supplementaryfiles/41586_2022_5275_MOESM3_ESM.xlsx Hsapiens 19 42248 38047 40787 36951 38777 39326 41883 37226 37226 37226 37226 39508 38412 38231 40238 40238 40238 40057 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [48] "PMC9605867 PMC_DL/PMC9605867/supplementaryfiles/41586_2022_5275_MOESM3_ESM.xlsx Hsapiens 14 40238 40238 40238 40238 39508 39508 39873 41153 37500 37500 37500 37500 37500 37500"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [49] "PMC9605867 PMC_DL/PMC9605867/supplementaryfiles/41586_2022_5275_MOESM3_ESM.xlsx Hsapiens 12 42248 40787 36951 41883 37226 37226 38412 38231 40238 40238 40057 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [50] "PMC9605867 PMC_DL/PMC9605867/supplementaryfiles/41586_2022_5275_MOESM3_ESM.xlsx Hsapiens 2 37500 37226"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [51] "PMC9605867 PMC_DL/PMC9605867/supplementaryfiles/41586_2022_5275_MOESM3_ESM.xlsx Hsapiens 1 37226"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [52] "PMC9584372 PMC_DL/PMC9584372/supplementaryfiles/pbio.3001543.s011.xlsx Hsapiens 7 43717 43715 43528 43714 43710 43713 43532"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [53] "PMC9550834 PMC_DL/PMC9550834/supplementaryfiles/41467_2022_33359_MOESM29_ESM.xlsx Hsapiens 1 4-Mar"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [54] "PMC9550834 PMC_DL/PMC9550834/supplementaryfiles/41467_2022_33359_MOESM29_ESM.xlsx Hsapiens 1 4-Mar"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [55] "PMC9550834 PMC_DL/PMC9550834/supplementaryfiles/41467_2022_33359_MOESM9_ESM.xlsx Hsapiens 1 42988"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [56] "PMC9570186 zip/Table_S1.xlsx Ggallus 8 44257 44258 44449 44257 44442 44256 44443 44265"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [57] "PMC9570186 zip/Table_S1.xlsx Ggallus 7 44257 44258 44449 44264 44443 44442 44440"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [58] "PMC9570186 zip/Table_S1.xlsx Ggallus 11 44447 44258 44257 44449 44257 44444 44264 44442 44265 44440 44256"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [59] "PMC9570186 zip/Table_S1.xlsx Hsapiens 4 44442 44258 44257 44449"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [60] "PMC9570186 zip/Table_S15.xlsx Ggallus 4 44622 44808 44623 44623"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [61] "PMC9548106 PMC_DL/PMC9548106/supplementaryfiles/12935_2022_2728_MOESM2_ESM.xlsx Hsapiens 4 44531 44448 44448 44257"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [62] "PMC9548106 PMC_DL/PMC9548106/supplementaryfiles/12935_2022_2728_MOESM2_ESM.xlsx Hsapiens 5 44257 44257 44260 44260 44453"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [63] "PMC9585224 PMC_DL/PMC9585224/supplementaryfiles/Table_2.xls Hsapiens 1 2022/12/01"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [64] "PMC9547065 PMC_DL/PMC9547065/supplementaryfiles/41467_2022_33427_MOESM6_ESM.xlsx Hsapiens 7 43160 43160 43167 43167 43347 43346 43346"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [65] "PMC9547055 PMC_DL/PMC9547055/supplementaryfiles/41467_2022_33544_MOESM7_ESM.xlsx Hsapiens 1 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [66] "PMC9547055 PMC_DL/PMC9547055/supplementaryfiles/41467_2022_33544_MOESM6_ESM.xlsx Hsapiens 1 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [67] "PMC9546890 PMC_DL/PMC9546890/supplementaryfiles/41598_2022_21003_MOESM2_ESM.xlsx Hsapiens 26 44450 44442 44260 44446 44256 44257 44266 44256 44447 44451 44448 44443 44265 44453 44449 44531 44262 44258 44259 44257 44263 44454 44440 44440 44441 44261"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [68] "PMC9544324 zip/sciadv.abn5535_file_s2.xlsx Hsapiens 2 44261 44260"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
##  [69] "PMC9586874 PMC_DL/PMC9586874/supplementaryfiles/41556_2022_996_MOESM3_ESM.xlsx Mmusculus 2 37316 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [70] "PMC9586874 PMC_DL/PMC9586874/supplementaryfiles/41556_2022_996_MOESM3_ESM.xlsx Mmusculus 3 38412 38412 37316"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [71] "PMC9586874 PMC_DL/PMC9586874/supplementaryfiles/41556_2022_996_MOESM3_ESM.xlsx Mmusculus 1 38777"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [72] "PMC9582937 zip/Table_S13.xlsx Athaliana 1 44836"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [73] "PMC9561262 zip/Supplementary_Data_S4.xlsx Mmusculus 11 44623 44813 44623 44812 44813 44623 44622 44626 44630 44628 44811"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [74] "PMC9585938 PMC_DL/PMC9585938/supplementaryfiles/Table1.XLSX Hsapiens 11 40057 40787 37865 38596 40057 37500 37865 40057 37500 40057 39326"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [75] "PMC9585938 PMC_DL/PMC9585938/supplementaryfiles/Table1.XLSX Hsapiens 35 37500 39326 37226 40057 40057 38961 40057 37865 38231 38231 40057 38596 40057 37226 39692 40787 37135 41883 38231 40057 40422 38961 40057 37226 40057 40057 40057 38231 40057 40057 40057 39692 38961 40057 40787"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [76] "PMC9579367 PMC_DL/PMC9579367/supplementaryfiles/Table_1.xlsx Hsapiens 2 44812 44810"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [77] "PMC9579347 PMC_DL/PMC9579347/supplementaryfiles/DataSheet1.xlsx Ggallus 1 10-Mar"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [78] "PMC9579347 PMC_DL/PMC9579347/supplementaryfiles/DataSheet1.xlsx Hsapiens 1 44621"