Source: https://github.com/markziemann/GeneNameErrors2020

Vew the reports: http://118.138.234.73/public/gene_name_errors/

Intro

Gene name errors result when data are imported improperly into MS Excel and other spreadsheet programs (Zeeberg et al, 2004). Certain gene names like MARCH3, SEPT2 and DEC1 are converted into date format. These errors are surprisingly common in supplementary data files in the field of genomics (Ziemann et al, 2016). This could be considered a small error because it only affects a small number of genes, however it is symptomtic of poor data processing methods. The purpose of this script is to identify gene name errors present in supplementary files of PubMed Central articles in the previous month.

library("xml2")
library("reutils")
library("readxl")

Get PMC IDs

Here I will be getting PubMed Central IDs for the previous month.

Start with figuring out the date to search PubMed Central.

CURRENT_MONTH=format(Sys.time(), "%m")
CURRENT_YEAR=format(Sys.time(), "%Y")

if (CURRENT_MONTH == "01") {
  PREV_YEAR=as.character(as.numeric(format(Sys.time(), "%Y"))-1)
  PREV_MONTH="12"
} else {
  PREV_YEAR=CURRENT_YEAR
  PREV_MONTH=as.character(as.numeric(format(Sys.time(), "%m"))-1)
}

DATE=paste(PREV_YEAR,"/",PREV_MONTH,sep="")
DATE
## [1] "2020/12"

Let's see how many PMC IDs we have in the past month.

QUERY ='((genom*[Abstract]))'

ESEARCH_RES <- esearch(term=QUERY, db = "pmc", rettype = "uilist", retmode = "xml", retstart = 0, 
  retmax = 5000000, usehistory = TRUE, webenv = NULL, querykey = NULL, sort = NULL, field = NULL, 
  datetype = NULL, reldate = NULL, mindate = DATE, maxdate = DATE)

pmc <- efetch(ESEARCH_RES,retmode="text",rettype="uilist",outfile="pmcids.txt")
## Retrieving UIDs 1 to 500
## Retrieving UIDs 501 to 1000
## Retrieving UIDs 1001 to 1500
## Retrieving UIDs 1501 to 2000
## Retrieving UIDs 2001 to 2500
## Retrieving UIDs 2501 to 3000
## Retrieving UIDs 3001 to 3500
## Retrieving UIDs 3501 to 4000
## Retrieving UIDs 4001 to 4500
pmc <- read.table(pmc)
pmc <- paste("PMC",pmc$V1,sep="")
NUM_ARTICLES=length(pmc)
NUM_ARTICLES
## [1] 4472
writeLines(pmc,con="pmc.txt")

Run the screen

Now run the bash script. Note that false positives can occur (~1.5%) and these results have not been verified by a human.

Here are some definitions:

#system("./gene_names.sh pmc.txt")
results <- readLines("results.txt")

XLS <- results[grep("XLS",results,ignore.case=TRUE)]
NUM_XLS = length(XLS)
NUM_XLS
## [1] 1042
NUM_XLS_ARTICLES = length(unique(sapply(strsplit(XLS," "),"[[",1)))
NUM_XLS_ARTICLES
## [1] 199
GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>2]
#GENELISTS

NUM_GENELISTS <- length(unique(sapply(strsplit(GENELISTS," "),"[[",2)))
NUM_GENELISTS
## [1] 132
NUM_GENELIST_ARTICLES <- length(unique(sapply(strsplit(GENELISTS," "),"[[",1)))
NUM_GENELIST_ARTICLES
## [1] 64
ERROR_GENELISTS <- XLS[lapply(strsplit(XLS," "),length)>3]
#ERROR_GENELISTS

NUM_ERROR_GENELISTS = length(ERROR_GENELISTS)
NUM_ERROR_GENELISTS
## [1] 42
GENELIST_ERROR_ARTICLES <- unique(sapply(strsplit(ERROR_GENELISTS," "),"[[",1))
GENELIST_ERROR_ARTICLES
##  [1] "PMC7758481" "PMC7746835" "PMC7744954" "PMC7732301" "PMC7732848"
##  [6] "PMC7726486" "PMC7726151" "PMC7718812" "PMC7738636" "PMC7734124"
## [11] "PMC7732649" "PMC7728435" "PMC7723986" "PMC7714959" "PMC7724473"
## [16] "PMC7730811" "PMC7723042" "PMC7721725" "PMC7714695" "PMC7723770"
## [21] "PMC7717581" "PMC7710658" "PMC7711149" "PMC7707522"
NUM_ERROR_GENELIST_ARTICLES <- length(GENELIST_ERROR_ARTICLES) 
NUM_ERROR_GENELIST_ARTICLES
## [1] 24
ERROR_PROPORTION = NUM_ERROR_GENELIST_ARTICLES / NUM_GENELIST_ARTICLES
ERROR_PROPORTION
## [1] 0.375

Look at the errors detected

Here you can have a look at all the gene lists detected in the past month, as well as those with errors. The dates are obvious errors, these are commonly dates in September, March, December and October. The five-digit numbers represent dates as they are encoded in the Excel internal format. The five digit number is the number of days since 1900. If you were to take these numbers and put them into Excel and format the cells as dates, then these will also mostly map to dates in September, March, December and October.

GENELISTS
##   [1] "PMC7771963 /pmc/articles/PMC7771963/bin/elife-55793-supp1.xlsx Dmelanogaster"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
##   [2] "PMC7771963 /pmc/articles/PMC7771963/bin/elife-55793-supp1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##   [3] "PMC7771206 /pmc/articles/PMC7771206/bin/12920_2020_828_MOESM2_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [4] "PMC7771076 /pmc/articles/PMC7771076/bin/12920_2020_836_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [5] "PMC7771076 /pmc/articles/PMC7771076/bin/12920_2020_836_MOESM5_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [6] "PMC7771076 /pmc/articles/PMC7771076/bin/12920_2020_836_MOESM6_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
##   [7] "PMC7769233 /pmc/articles/PMC7769233/bin/PBI-19-109-s001.xls Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##   [8] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_2.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##   [9] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_2.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [10] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_3.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [11] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_3.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [12] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [13] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [14] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_4.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [15] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_4.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [16] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_4.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [17] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_5.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [18] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_6.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [19] "PMC7769845 /pmc/articles/PMC7769845/bin/Table_6.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [20] "PMC7768046 /pmc/articles/PMC7768046/bin/Table_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [21] "PMC7768046 /pmc/articles/PMC7768046/bin/Table_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [22] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_10.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [23] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_11.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [24] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_12.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [25] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_12.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [26] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_12.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [27] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_1.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [28] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [29] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_6.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [30] "PMC7767998 /pmc/articles/PMC7767998/bin/Table_7.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [31] "PMC7762822 /pmc/articles/PMC7762822/bin/mmc2.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [32] "PMC7758710 /pmc/articles/PMC7758710/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [33] "PMC7758710 /pmc/articles/PMC7758710/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [34] "PMC7758710 /pmc/articles/PMC7758710/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [35] "PMC7758710 /pmc/articles/PMC7758710/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [36] "PMC7758710 /pmc/articles/PMC7758710/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [37] "PMC7751343 /pmc/articles/PMC7751343/bin/Supplementary_Data2.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [38] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [39] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [40] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [41] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [42] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [43] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [44] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [45] "PMC7749177 /pmc/articles/PMC7749177/bin/41467_2020_20086_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [46] "PMC7738172 /pmc/articles/PMC7738172/bin/ppat.1009113.s002.xlsx Celegans"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [47] "PMC7738172 /pmc/articles/PMC7738172/bin/ppat.1009113.s002.xlsx Celegans"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
##  [48] "PMC7767460 /pmc/articles/PMC7767460/bin/cancers-12-03867-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [49] "PMC7767460 /pmc/articles/PMC7767460/bin/cancers-12-03867-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [50] "PMC7767460 /pmc/articles/PMC7767460/bin/cancers-12-03867-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [51] "PMC7767460 /pmc/articles/PMC7767460/bin/cancers-12-03867-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
##  [52] "PMC7765024 /pmc/articles/PMC7765024/bin/ijms-21-09500-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [53] "PMC7765024 /pmc/articles/PMC7765024/bin/ijms-21-09500-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [54] "PMC7765024 /pmc/articles/PMC7765024/bin/ijms-21-09500-s001.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [55] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_1.xlsx Hsapiens 1 43532"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [56] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_3.xlsx Hsapiens 3 43713 43714 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [57] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_6.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [58] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_6.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [59] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [60] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [61] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [62] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [63] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [64] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [65] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [66] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [67] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [68] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [69] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [70] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [71] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [72] "PMC7758323 /pmc/articles/PMC7758323/bin/Data_Sheet_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
##  [73] "PMC7753206 /pmc/articles/PMC7753206/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [74] "PMC7753206 /pmc/articles/PMC7753206/bin/Table_4.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
##  [75] "PMC7747725 /pmc/articles/PMC7747725/bin/41598_2020_79037_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [76] "PMC7736716 /pmc/articles/PMC7736716/bin/mmc2.xls Ggallus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [77] "PMC7736716 /pmc/articles/PMC7736716/bin/mmc3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
##  [78] "PMC7749173 /pmc/articles/PMC7749173/bin/42003_2020_1527_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [79] "PMC7749173 /pmc/articles/PMC7749173/bin/42003_2020_1527_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
##  [80] "PMC7739048 /pmc/articles/PMC7739048/bin/vdaa142_suppl_supplementary_tables.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
##  [81] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [82] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [83] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [84] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [85] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [86] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [87] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [88] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [89] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [90] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [91] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [92] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [93] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [94] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [95] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [96] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [97] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [98] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
##  [99] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [100] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [101] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [102] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [103] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [104] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [105] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [106] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [107] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [108] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [109] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [110] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [111] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [112] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [113] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [114] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [115] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [116] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [117] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [118] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [119] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [120] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [121] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens 1 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [122] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [123] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [124] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [125] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [126] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [127] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [128] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [129] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [130] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [131] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [132] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [133] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [134] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [135] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [136] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [137] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [138] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [139] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [140] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [141] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [142] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [143] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [144] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [145] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [146] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [147] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [148] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [149] "PMC7744954 /pmc/articles/PMC7744954/bin/ACEL-19-e13278-s002.xlsx Mmusculus 26 42248 39326 41883 40238 38777 40787 40238 37681 37135 41153 40603 39692 40422 40238 38961 39508 40238 38047 38231 40238 39873 40057 40422 40238 37865 37681"                                                                                                                                                                                                                                                                                                                                                                                         
## [150] "PMC7744954 /pmc/articles/PMC7744954/bin/ACEL-19-e13278-s002.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [151] "PMC7734003 /pmc/articles/PMC7734003/bin/CAS-111-4594-s002.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [152] "PMC7734003 /pmc/articles/PMC7734003/bin/CAS-111-4594-s002.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [153] "PMC7732301 /pmc/articles/PMC7732301/bin/aging-12-103859-s001..xlsx Hsapiens 1 43893"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [154] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [155] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [156] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [157] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 3 37165 37530 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [158] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [159] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [160] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 3 42248 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [161] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 2 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [162] "PMC7732068 /pmc/articles/PMC7732068/bin/pone.0232101.s008.xlsx Dmelanogaster"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [163] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM10_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [164] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM10_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [165] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM10_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [166] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM12_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [167] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM20_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [168] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM21_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [169] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM21_ESM.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [170] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [171] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [172] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [173] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [174] "PMC7729872 /pmc/articles/PMC7729872/bin/41467_2020_20079_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [175] "PMC7728285 /pmc/articles/PMC7728285/bin/ppat.1009028.s005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [176] "PMC7728285 /pmc/articles/PMC7728285/bin/ppat.1009028.s005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [177] "PMC7728285 /pmc/articles/PMC7728285/bin/ppat.1009028.s007.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [178] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc2.xlsx Hsapiens 1 43712"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [179] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc3.xlsx Hsapiens 1 43712"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [180] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [181] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc5.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [182] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [183] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [184] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [185] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [186] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM6_ESM.xlsx Hsapiens 21 44078 44081 43896 44085 44085 44085 44085 44085 43897 44080 44080 43893 44084 44082 43896 44089 44080 43892 44076 43896 44083"                                                                                                                                                                                                                                                                                                                                                                                                                
## [187] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM6_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [188] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM6_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [189] "PMC7718812 /pmc/articles/PMC7718812/bin/tvst-9-13-8_s004.xlsx Hsapiens 3 42980 42987 42985"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [190] "PMC7718812 /pmc/articles/PMC7718812/bin/tvst-9-13-8_s005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [191] "PMC7718792 /pmc/articles/PMC7718792/bin/peerj-08-10457-s002.xls Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [192] "PMC7718792 /pmc/articles/PMC7718792/bin/peerj-08-10457-s003.xls Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [193] "PMC7718792 /pmc/articles/PMC7718792/bin/peerj-08-10457-s004.xlsx Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [194] "PMC7718792 /pmc/articles/PMC7718792/bin/peerj-08-10457-s005.xlsx Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [195] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_1.xls Ggallus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [196] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_3.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [197] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_4.xlsx Ggallus 2 43891 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [198] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_4.xlsx Hsapiens 1 44082"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [199] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_6.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [200] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_6.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [201] "PMC7738478 /pmc/articles/PMC7738478/bin/Table_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [202] "PMC7731467 /pmc/articles/PMC7731467/bin/12876_2020_1560_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [203] "PMC7731467 /pmc/articles/PMC7731467/bin/12876_2020_1560_MOESM6_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [204] "PMC7731467 /pmc/articles/PMC7731467/bin/12876_2020_1560_MOESM9_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [205] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [206] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [207] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [208] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [209] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [210] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [211] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s007.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [212] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s007.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [213] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s008.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [214] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s008.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [215] "PMC7721185 /pmc/articles/PMC7721185/bin/pgen.1009163.s009.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [216] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_2.XLSX Mmusculus 23 44075 44081 44082 44084 44078 43901 44077 43895 43898 44076 43891 43897 43893 43891 43896 43899 44080 44085 44083 44079 43892 43900 43892"                                                                                                                                                                                                                                                                                                                                                                                                                       
## [217] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_8.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [218] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_8.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [219] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_8.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [220] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_8.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [221] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_2.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [222] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_2.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [223] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_3.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [224] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_4.xls Hsapiens 1 44075"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [225] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_5.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [226] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [227] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [228] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [229] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [230] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [231] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [232] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [233] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [234] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [235] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [236] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [237] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [238] "PMC7729193 /pmc/articles/PMC7729193/bin/Table_5.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [239] "PMC7728698 /pmc/articles/PMC7728698/bin/Table_1.XLSX Athaliana"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [240] "PMC7728698 /pmc/articles/PMC7728698/bin/Table_1.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [241] "PMC7728435 /pmc/articles/PMC7728435/bin/elife-59980-fig1-data8.xlsx Hsapiens 30 2020/09/11 2020/09/09 2020/09/03 2020/03/03 2020/03/01 2020/09/03 2020/09/06 2020/09/06 2020/03/05 2020/09/02 2020/03/08 2020/03/02 2020/09/10 2020/03/02 2020/03/07 2020/03/06 2020/09/02 2020/03/06 2020/09/07 2020/03/02 2020/03/05 2020/09/08 2020/03/09 2020/03/02 2020/09/06 2020/09/02 2020/09/05 2020/09/15 2020/03/08 2020/09/01"                                                                                                                                                                                                         
## [242] "PMC7728435 /pmc/articles/PMC7728435/bin/elife-59980-fig2-data2.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [243] "PMC7728435 /pmc/articles/PMC7728435/bin/elife-59980-fig2-data3.xlsx Hsapiens 13 2020/03/06 2020/03/02 2020/03/02 2020/03/01 2020/03/03 2020/03/06 2020/03/07 2020/03/02 2020/03/05 2020/03/08 2020/03/09 2020/03/05 2020/03/08"                                                                                                                                                                                                                                                                                                                                                                                                    
## [244] "PMC7725876 /pmc/articles/PMC7725876/bin/Table_2.xls Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [245] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_3.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [246] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [247] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_6.XLSX Hsapiens 5 2020/03/02 2020/03/02 2020/03/02 2020/03/02 2020/03/02"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [248] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_6.XLSX Hsapiens 5 2020/03/02 2020/03/02 2020/03/02 2020/03/02 2020/03/02"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [249] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_9.XLSX Ggallus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [250] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_9.XLSX Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [251] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [252] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [253] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [254] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [255] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [256] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [257] "PMC7718028 /pmc/articles/PMC7718028/bin/Table_4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [258] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [259] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_1.xlsx Hsapiens 2 43894 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [260] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_2.xlsx Hsapiens 5 44078 44080 44166 43900 44079"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [261] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_2.xlsx Hsapiens 3 43891 43891 43899"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [262] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [263] "PMC7724473 /pmc/articles/PMC7724473/bin/mmc2.xlsx Mmusculus 12 40057 38412 39692 39326 41883 40422 37500 37135 40787 37316 42248 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [264] "PMC7724473 /pmc/articles/PMC7724473/bin/mmc3.xlsx Mmusculus 9 39142 39692 39326 40422 37500 37135 40057 40787 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [265] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [266] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [267] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 40 43525 43529 43532 43532 43533 43534 43534 43717 43717 43717 43717 43528 43528 43528 43528 43531 43710 43525 43525 43525 43525 43525 43527 43527 43716 43716 43715 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800"                                                                                                                                                                                                                                                                                                
## [268] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 6 43892 43891 43898 44082 43896 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [269] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 1 43892"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [270] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [271] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [272] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [273] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [274] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [275] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [276] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [277] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [278] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [279] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [280] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [281] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [282] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [283] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [284] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [285] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [286] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 3 43716 43532 43709"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [287] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [288] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [289] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [290] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [291] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [292] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [293] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [294] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [295] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [296] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [297] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [298] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [299] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [300] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [301] "PMC7726308 /pmc/articles/PMC7726308/bin/Supplementary_Data1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [302] "PMC7723042 /pmc/articles/PMC7723042/bin/41467_2020_19813_MOESM15_ESM.xlsx Hsapiens 22 43349 43348 43353 43161 43345 43167 43344 43168 43160 43161 43351 43162 43165 43170 43352 43169 43347 43166 43160 43164 43346 43350"                                                                                                                                                                                                                                                                                                                                                                                                         
## [303] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM10_ESM.xlsx Hsapiens 9 40057 40057 40057 39508 40057 40787 40057 40057 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [304] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM4_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [305] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM5_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [306] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM6_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [307] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM8_ESM.xlsx Hsapiens 5 39508 40057 40057 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [308] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM9_ESM.xlsx Ggallus 8 40057 40057 40057 37226 36951 36951 40057 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [309] "PMC7721644 /pmc/articles/PMC7721644/bin/mmc2.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [310] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [311] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [312] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [313] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM3_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [314] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM5_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [315] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM5_ESM.xlsx Hsapiens 1 42256"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [316] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM5_ESM.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
## [317] "PMC7708349 /pmc/articles/PMC7708349/bin/Table_1.xlsx Dmelanogaster"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [318] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [319] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Ggallus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [320] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [321] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [322] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [323] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [324] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [325] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-003.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [326] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [327] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [328] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [329] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [330] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [331] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [332] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [333] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-004.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [334] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [335] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [336] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [337] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [338] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [339] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [340] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [341] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-005.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [342] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [343] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [344] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [345] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [346] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [347] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [348] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [349] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-006.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [350] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-007.xlsx Ggallus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
## [351] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-007.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [352] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-009.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [353] "PMC7726493 /pmc/articles/PMC7726493/bin/EXCLI-19-1459-s-009.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [354] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [355] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [356] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc1.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [357] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc3.xlsx Hsapiens 23 44086 44078 44085 44079 43896 44081 43900 44084 43894 44088 43895 44166 43897 44077 43899 44083 43898 43892 43893 43891 43892 43891 44075"                                                                                                                                                                                                                                                                                                                                                                                                                           
## [358] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc3.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [359] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc4.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [360] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc5.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [361] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc5.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [362] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 5 44078 44078 44078 44078 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [363] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 1 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [364] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 2 44078 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [365] "PMC7714144 /pmc/articles/PMC7714144/bin/ppat.1009055.s007.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [366] "PMC7714144 /pmc/articles/PMC7714144/bin/ppat.1009055.s008.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [367] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [368] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus 1 43898"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [369] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [370] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [371] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [372] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [373] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [374] "PMC7693437 /pmc/articles/PMC7693437/bin/Table_1.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [375] "PMC7693437 /pmc/articles/PMC7693437/bin/Table_1.XLSX Mmusculus"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
## [376] "PMC7689744 /pmc/articles/PMC7689744/bin/CPT-108-1067-s012.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [377] "PMC7689744 /pmc/articles/PMC7689744/bin/CPT-108-1067-s012.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [378] "PMC7689744 /pmc/articles/PMC7689744/bin/CPT-108-1067-s012.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [379] "PMC7711149 /pmc/articles/PMC7711149/bin/sj-xls-2-mpx-10.1177_1744806920966902.xls Hsapiens 47 2020/03/06 2020/12/01 2020/03/04 2020/03/01 2020/03/01 2020/03/01 2020/09/09 2020/03/03 2020/03/11 2020/09/11 2020/03/01 2020/03/08 2020/09/08 2020/09/02 2020/09/03 2020/03/01 2020/03/01 2020/03/01 2020/09/07 2020/12/01 2020/03/06 2020/09/09 2020/09/11 2020/09/02 2020/03/11 2020/03/11 2020/03/10 2020/03/01 2020/03/01 2020/03/11 2020/09/09 2020/03/11 2020/12/01 2020/03/02 2020/03/03 2020/09/09 2020/09/09 2020/09/07 2020/03/03 2020/03/01 2020/03/04 2020/03/03 2020/03/04 2020/03/08 2020/09/09 2020/03/08 2020/03/02"
## [380] "PMC7711149 /pmc/articles/PMC7711149/bin/sj-xls-3-mpx-10.1177_1744806920966902.xls Hsapiens 2 2020/03/01 2020/03/01"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [381] "PMC7707522 /pmc/articles/PMC7707522/bin/ppat.1008593.s011.xlsx Hsapiens 2 40787 37500"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [382] "PMC7292296 /pmc/articles/PMC7292296/bin/NPR2-39-301-s002.xlsx Hsapiens"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [383] "PMC7292296 /pmc/articles/PMC7292296/bin/NPR2-39-301-s002.xlsx Hsapiens"
ERROR_GENELISTS
##  [1] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_1.xlsx Hsapiens 1 43532"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [2] "PMC7758481 /pmc/articles/PMC7758481/bin/DataSheet_3.xlsx Hsapiens 3 43713 43714 43717"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
##  [3] "PMC7746835 /pmc/articles/PMC7746835/bin/DataSheet_3.xlsx Hsapiens 1 43896"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
##  [4] "PMC7744954 /pmc/articles/PMC7744954/bin/ACEL-19-e13278-s002.xlsx Mmusculus 26 42248 39326 41883 40238 38777 40787 40238 37681 37135 41153 40603 39692 40422 40238 38961 39508 40238 38047 38231 40238 39873 40057 40422 40238 37865 37681"                                                                                                                                                                                                                                                                                                                                                                                         
##  [5] "PMC7732301 /pmc/articles/PMC7732301/bin/aging-12-103859-s001..xlsx Hsapiens 1 43893"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
##  [6] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 3 37165 37530 37865"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [7] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 3 42248 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
##  [8] "PMC7732848 /pmc/articles/PMC7732848/bin/42003_2020_1497_MOESM3_ESM.xlsx Hsapiens 2 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
##  [9] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc2.xlsx Hsapiens 1 43712"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [10] "PMC7726486 /pmc/articles/PMC7726486/bin/mmc3.xlsx Hsapiens 1 43712"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [11] "PMC7726151 /pmc/articles/PMC7726151/bin/41467_2020_20136_MOESM6_ESM.xlsx Hsapiens 21 44078 44081 43896 44085 44085 44085 44085 44085 43897 44080 44080 43893 44084 44082 43896 44089 44080 43892 44076 43896 44083"                                                                                                                                                                                                                                                                                                                                                                                                                
## [12] "PMC7718812 /pmc/articles/PMC7718812/bin/tvst-9-13-8_s004.xlsx Hsapiens 3 42980 42987 42985"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [13] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_4.xlsx Ggallus 2 43891 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [14] "PMC7738636 /pmc/articles/PMC7738636/bin/Table_4.xlsx Hsapiens 1 44082"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [15] "PMC7734124 /pmc/articles/PMC7734124/bin/Table_2.XLSX Mmusculus 23 44075 44081 44082 44084 44078 43901 44077 43895 43898 44076 43891 43897 43893 43891 43896 43899 44080 44085 44083 44079 43892 43900 43892"                                                                                                                                                                                                                                                                                                                                                                                                                       
## [16] "PMC7732649 /pmc/articles/PMC7732649/bin/Table_4.xls Hsapiens 1 44075"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [17] "PMC7728435 /pmc/articles/PMC7728435/bin/elife-59980-fig1-data8.xlsx Hsapiens 30 2020/09/11 2020/09/09 2020/09/03 2020/03/03 2020/03/01 2020/09/03 2020/09/06 2020/09/06 2020/03/05 2020/09/02 2020/03/08 2020/03/02 2020/09/10 2020/03/02 2020/03/07 2020/03/06 2020/09/02 2020/03/06 2020/09/07 2020/03/02 2020/03/05 2020/09/08 2020/03/09 2020/03/02 2020/09/06 2020/09/02 2020/09/05 2020/09/15 2020/03/08 2020/09/01"                                                                                                                                                                                                         
## [18] "PMC7728435 /pmc/articles/PMC7728435/bin/elife-59980-fig2-data3.xlsx Hsapiens 13 2020/03/06 2020/03/02 2020/03/02 2020/03/01 2020/03/03 2020/03/06 2020/03/07 2020/03/02 2020/03/05 2020/03/08 2020/03/09 2020/03/05 2020/03/08"                                                                                                                                                                                                                                                                                                                                                                                                    
## [19] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_6.XLSX Hsapiens 5 2020/03/02 2020/03/02 2020/03/02 2020/03/02 2020/03/02"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [20] "PMC7723986 /pmc/articles/PMC7723986/bin/Table_6.XLSX Hsapiens 5 2020/03/02 2020/03/02 2020/03/02 2020/03/02 2020/03/02"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [21] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_1.xlsx Hsapiens 2 43894 44085"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
## [22] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_2.xlsx Hsapiens 5 44078 44080 44166 43900 44079"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
## [23] "PMC7714959 /pmc/articles/PMC7714959/bin/Table_2.xlsx Hsapiens 3 43891 43891 43899"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [24] "PMC7724473 /pmc/articles/PMC7724473/bin/mmc2.xlsx Mmusculus 12 40057 38412 39692 39326 41883 40422 37500 37135 40787 37316 42248 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
## [25] "PMC7724473 /pmc/articles/PMC7724473/bin/mmc3.xlsx Mmusculus 9 39142 39692 39326 40422 37500 37135 40057 40787 38961"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [26] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 40 43525 43529 43532 43532 43533 43534 43534 43717 43717 43717 43717 43528 43528 43528 43528 43531 43710 43525 43525 43525 43525 43525 43527 43527 43716 43716 43715 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800 43800"                                                                                                                                                                                                                                                                                                
## [27] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 6 43892 43891 43898 44082 43896 44081"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
## [28] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 1 43892"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [29] "PMC7730811 /pmc/articles/PMC7730811/bin/13148_2020_983_MOESM1_ESM.xlsx Hsapiens 3 43716 43532 43709"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [30] "PMC7723042 /pmc/articles/PMC7723042/bin/41467_2020_19813_MOESM15_ESM.xlsx Hsapiens 22 43349 43348 43353 43161 43345 43167 43344 43168 43160 43161 43351 43162 43165 43170 43352 43169 43347 43166 43160 43164 43346 43350"                                                                                                                                                                                                                                                                                                                                                                                                         
## [31] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM10_ESM.xlsx Hsapiens 9 40057 40057 40057 39508 40057 40787 40057 40057 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
## [32] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM8_ESM.xlsx Hsapiens 5 39508 40057 40057 39692 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
## [33] "PMC7721725 /pmc/articles/PMC7721725/bin/42003_2020_1479_MOESM9_ESM.xlsx Ggallus 8 40057 40057 40057 37226 36951 36951 40057 40057"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
## [34] "PMC7714695 /pmc/articles/PMC7714695/bin/41594_2020_466_MOESM5_ESM.xlsx Hsapiens 1 42256"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
## [35] "PMC7723770 /pmc/articles/PMC7723770/bin/mmc3.xlsx Hsapiens 23 44086 44078 44085 44079 43896 44081 43900 44084 43894 44088 43895 44166 43897 44077 43899 44083 43898 43892 43893 43891 43892 43891 44075"                                                                                                                                                                                                                                                                                                                                                                                                                           
## [36] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 5 44078 44078 44078 44078 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
## [37] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 1 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
## [38] "PMC7717581 /pmc/articles/PMC7717581/bin/pgen.1009110.s029.xlsx Dmelanogaster 2 44078 44078"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
## [39] "PMC7710658 /pmc/articles/PMC7710658/bin/mmc2.xlsx Mmusculus 1 43898"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
## [40] "PMC7711149 /pmc/articles/PMC7711149/bin/sj-xls-2-mpx-10.1177_1744806920966902.xls Hsapiens 47 2020/03/06 2020/12/01 2020/03/04 2020/03/01 2020/03/01 2020/03/01 2020/09/09 2020/03/03 2020/03/11 2020/09/11 2020/03/01 2020/03/08 2020/09/08 2020/09/02 2020/09/03 2020/03/01 2020/03/01 2020/03/01 2020/09/07 2020/12/01 2020/03/06 2020/09/09 2020/09/11 2020/09/02 2020/03/11 2020/03/11 2020/03/10 2020/03/01 2020/03/01 2020/03/11 2020/09/09 2020/03/11 2020/12/01 2020/03/02 2020/03/03 2020/09/09 2020/09/09 2020/09/07 2020/03/03 2020/03/01 2020/03/04 2020/03/03 2020/03/04 2020/03/08 2020/09/09 2020/03/08 2020/03/02"
## [41] "PMC7711149 /pmc/articles/PMC7711149/bin/sj-xls-3-mpx-10.1177_1744806920966902.xls Hsapiens 2 2020/03/01 2020/03/01"                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
## [42] "PMC7707522 /pmc/articles/PMC7707522/bin/ppat.1008593.s011.xlsx Hsapiens 2 40787 37500"

In depth look at the errors

Let's investigate the errors in more detail.

# By species
SPECIES <- sapply(strsplit(ERROR_GENELISTS," "),"[[",3)
table(SPECIES)
## SPECIES
## Dmelanogaster       Ggallus      Hsapiens     Mmusculus 
##             3             2            32             5
barplot(table(SPECIES))

# Number of affected Excel files per paper
DIST <- table(sapply(strsplit(ERROR_GENELISTS," "),"[[",1))
DIST
## 
## PMC7707522 PMC7710658 PMC7711149 PMC7714695 PMC7714959 PMC7717581 PMC7718812 
##          1          1          2          1          3          3          1 
## PMC7721725 PMC7723042 PMC7723770 PMC7723986 PMC7724473 PMC7726151 PMC7726486 
##          3          1          1          2          2          1          2 
## PMC7728435 PMC7730811 PMC7732301 PMC7732649 PMC7732848 PMC7734124 PMC7738636 
##          2          4          1          1          3          1          2 
## PMC7744954 PMC7746835 PMC7758481 
##          1          1          2
summary(as.numeric(DIST))
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##    1.00    1.00    1.50    1.75    2.00    4.00
hist(DIST,main="Number of affected Excel files per paper")

# PMC Articles with the most errors
DIST_DF <- as.data.frame(DIST)
DIST_DF <- DIST_DF[order(-DIST_DF$Freq),,drop=FALSE]
DIST_DF
##          Var1 Freq
## 16 PMC7730811    4
## 5  PMC7714959    3
## 6  PMC7717581    3
## 8  PMC7721725    3
## 19 PMC7732848    3
## 3  PMC7711149    2
## 11 PMC7723986    2
## 12 PMC7724473    2
## 14 PMC7726486    2
## 15 PMC7728435    2
## 21 PMC7738636    2
## 24 PMC7758481    2
## 1  PMC7707522    1
## 2  PMC7710658    1
## 4  PMC7714695    1
## 7  PMC7718812    1
## 9  PMC7723042    1
## 10 PMC7723770    1
## 13 PMC7726151    1
## 17 PMC7732301    1
## 18 PMC7732649    1
## 20 PMC7734124    1
## 22 PMC7744954    1
## 23 PMC7746835    1
MOST_ERR_FILES = as.character(DIST_DF[1,1])
MOST_ERR_FILES
## [1] "PMC7730811"
# Number of errors per paper
NERR <- as.numeric(sapply(strsplit(ERROR_GENELISTS," "),"[[",4))
names(NERR) <- sapply(strsplit(ERROR_GENELISTS," "),"[[",1)
NERR <-tapply(NERR, names(NERR), sum)
NERR
## PMC7707522 PMC7710658 PMC7711149 PMC7714695 PMC7714959 PMC7717581 PMC7718812 
##          2          1         49          1         10          8          3 
## PMC7721725 PMC7723042 PMC7723770 PMC7723986 PMC7724473 PMC7726151 PMC7726486 
##         22         22         23         10         21         21          2 
## PMC7728435 PMC7730811 PMC7732301 PMC7732649 PMC7732848 PMC7734124 PMC7738636 
##         43         50          1          1          8         23          3 
## PMC7744954 PMC7746835 PMC7758481 
##         26          1          4
hist(NERR,main="number of errors per PMC article")

NERR_DF <- as.data.frame(NERR)
NERR_DF <- NERR_DF[order(-NERR_DF$NERR),,drop=FALSE]
NERR_DF
##            NERR
## PMC7730811   50
## PMC7711149   49
## PMC7728435   43
## PMC7744954   26
## PMC7723770   23
## PMC7734124   23
## PMC7721725   22
## PMC7723042   22
## PMC7724473   21
## PMC7726151   21
## PMC7714959   10
## PMC7723986   10
## PMC7717581    8
## PMC7732848    8
## PMC7758481    4
## PMC7718812    3
## PMC7738636    3
## PMC7707522    2
## PMC7726486    2
## PMC7710658    1
## PMC7714695    1
## PMC7732301    1
## PMC7732649    1
## PMC7746835    1
MOST_ERR = rownames(NERR_DF)[1]
MOST_ERR
## [1] "PMC7730811"

Journals affected

GENELIST_ERROR_ARTICLES <- gsub("PMC","",GENELIST_ERROR_ARTICLES)

ARTICLES <- esummary(GENELIST_ERROR_ARTICLES ,db = "pmc")

JOURNALS <- as.data.frame(table(ARTICLES$xmlValue("//FullJournalName")))

JOURNALS <- JOURNALS[order(-JOURNALS$Freq),]

JOURNAL_WINNER = as.character(JOURNALS[1,1])

JOURNALS
##                                                  Var1 Freq
## 10                              Frontiers in Oncology    5
## 5                              Communications Biology    2
## 13                              Nature Communications    2
## 1                                   Aging (Albany NY)    1
## 2                                          Aging Cell    1
## 3                                                Cell    1
## 4                                Clinical Epigenetics    1
## 6  Computational and Structural Biotechnology Journal    1
## 7                                               eLife    1
## 8                Frontiers in Cardiovascular Medicine    1
## 9         Frontiers in Cell and Developmental Biology    1
## 11                                     Molecular Pain    1
## 12  Molecular Therapy. Methods & Clinical Development    1
## 14              Nature Structural & Molecular Biology    1
## 15                                      PLoS Genetics    1
## 16                                     PLoS Pathogens    1
## 17                                  Stem Cell Reports    1
## 18          Translational Vision Science & Technology    1
JOURNALS <- JOURNALS[order(JOURNALS$Freq),]

par(mar=c(5,25,4,2))
barplot(JOURNALS$Freq,names.arg = JOURNALS$Var1,horiz=TRUE,las=1, 
  xlab="Papers with gene name errors in supp files",
  main="Top journals this month")

Journal of the month winner

Congrats to our Journal of the Month winner!

JOURNAL_WINNER
## [1] "Frontiers in Oncology"

Paper of the month winners

There are two categories:

Sometimes, one paper can win both categories. Congrats to our winners.

Paper with most files affected

MOST_ERR_FILES <- gsub("PMC","",MOST_ERR_FILES)

article <- esummary(MOST_ERR_FILES,db = "pmc")

article
## Object of class 'esummary' 
## <?xml version="1.0" encoding="UTF-8"?>
## <!DOCTYPE eSummaryResult PUBLIC "-//NLM//DTD esummary pmc 20160609//EN" "https://eutils.ncbi.nlm.nih.gov/eutils/dtd/20160609/esummary_pmc.dtd">
## <eSummaryResult>
##   <DocumentSummarySet status="OK">
##     <DbBuild>Build210111-0115m.1</DbBuild>
##     <DocumentSummary uid="7730811">
##       <PubDate>2020 Dec 11</PubDate>
##       <EPubDate>2020 Dec 11</EPubDate>
##       <PrintPubDate/>
##       <Source>Clin Epigenetics</Source>
##       <Authors>
##         <Author>
##           <Name>Good M</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Chu T</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Shaw P</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>McClain L</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Chamberlain A</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Castro C</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Rimer JM</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Mihi B</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Gong Q</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Nolan LS</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Cooksey K</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Linneman L</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Agrawal P</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Finegold DN</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Peters D</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##       </Authors>
##       <Title>Global hypermethylation of intestinal epithelial cells is a hallmark feature of neonatal surgical necrotizing enterocolitis</Title>
##       <Volume>12</Volume>
##       <Issue/>
##       <Pages>190</Pages>
##       <ArticleIds>
##         <ArticleId>
##           <IdType>pmid</IdType>
##           <Value>33308304</Value>
##         </ArticleId>
##         <ArticleId>
##           <IdType>doi</IdType>
##           <Value>10.1186/s13148-020-00983-6</Value>
##         </ArticleId>
##         <ArticleId>
##           <IdType>pmcid</IdType>
##           <Value>PMC7730811</Value>
##         </ArticleId>
##       </ArticleIds>
##       <FullJournalName>Clinical Epigenetics</FullJournalName>
##       <SortDate>2020/12/11 00:00</SortDate>
##       <PmcLiveDate>2020/12/11</PmcLiveDate>
##     </DocumentSummary>
##   </DocumentSummarySet>
## </eSummaryResult>
##  
## ESummary query using the database 'pmc'.
#journal <- article$xmlValue("//FullJournalName")

Paper with most date conversions

MOST_ERR <- gsub("PMC","",MOST_ERR)

article <- esummary(MOST_ERR,db = "pmc")

article
## Object of class 'esummary' 
## <?xml version="1.0" encoding="UTF-8"?>
## <!DOCTYPE eSummaryResult PUBLIC "-//NLM//DTD esummary pmc 20160609//EN" "https://eutils.ncbi.nlm.nih.gov/eutils/dtd/20160609/esummary_pmc.dtd">
## <eSummaryResult>
##   <DocumentSummarySet status="OK">
##     <DbBuild>Build210111-0115m.1</DbBuild>
##     <DocumentSummary uid="7730811">
##       <PubDate>2020 Dec 11</PubDate>
##       <EPubDate>2020 Dec 11</EPubDate>
##       <PrintPubDate/>
##       <Source>Clin Epigenetics</Source>
##       <Authors>
##         <Author>
##           <Name>Good M</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Chu T</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Shaw P</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>McClain L</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Chamberlain A</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Castro C</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Rimer JM</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Mihi B</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Gong Q</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Nolan LS</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Cooksey K</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Linneman L</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Agrawal P</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Finegold DN</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##         <Author>
##           <Name>Peters D</Name>
##           <AuthType>Author</AuthType>
##         </Author>
##       </Authors>
##       <Title>Global hypermethylation of intestinal epithelial cells is a hallmark feature of neonatal surgical necrotizing enterocolitis</Title>
##       <Volume>12</Volume>
##       <Issue/>
##       <Pages>190</Pages>
##       <ArticleIds>
##         <ArticleId>
##           <IdType>pmid</IdType>
##           <Value>33308304</Value>
##         </ArticleId>
##         <ArticleId>
##           <IdType>doi</IdType>
##           <Value>10.1186/s13148-020-00983-6</Value>
##         </ArticleId>
##         <ArticleId>
##           <IdType>pmcid</IdType>
##           <Value>PMC7730811</Value>
##         </ArticleId>
##       </ArticleIds>
##       <FullJournalName>Clinical Epigenetics</FullJournalName>
##       <SortDate>2020/12/11 00:00</SortDate>
##       <PmcLiveDate>2020/12/11</PmcLiveDate>
##     </DocumentSummary>
##   </DocumentSummarySet>
## </eSummaryResult>
##  
## ESummary query using the database 'pmc'.

Trend info

TODO: To plot the trend over the past 6 months.

References

  1. Zeeberg, B.R., Riss, J., Kane, D.W. et al. Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics. BMC Bioinformatics 5, 80 (2004). https://doi.org/10.1186/1471-2105-5-80

  2. Ziemann, M., Eren, Y. & El-Osta, A. Gene name errors are widespread in the scientific literature. Genome Biol 17, 177 (2016). https://doi.org/10.1186/s13059-016-1044-7

SessionInfo

sessionInfo()
## R version 3.6.3 (2020-02-29)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 18.04.5 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
## 
## locale:
##  [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8    
##  [5] LC_MONETARY=en_AU.UTF-8    LC_MESSAGES=en_AU.UTF-8   
##  [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
## [1] readxl_1.3.1  reutils_0.2.3 xml2_1.3.2   
## 
## loaded via a namespace (and not attached):
##  [1] Rcpp_1.0.5       XML_3.99-0.3     assertthat_0.2.1 digest_0.6.25   
##  [5] bitops_1.0-6     cellranger_1.1.0 magrittr_1.5     evaluate_0.14   
##  [9] rlang_0.4.7      stringi_1.5.3    rmarkdown_2.3    tools_3.6.3     
## [13] stringr_1.4.0    RCurl_1.98-1.2   xfun_0.16        yaml_2.2.1      
## [17] compiler_3.6.3   htmltools_0.5.0  knitr_1.29