Sample	r_processed	r_short_filtered	r_empty_filtered	r_avail	r_trimmed	r_untrimmed	pct_avail	pct_trimmed	pct_untrimmed
10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L001_R1	12281228	0	0	12281228	998432	11282796	100.0	8.129740771851154	91.87025922814884
10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L002_R1	12385696	0	0	12385696	1010231	11375465	100.0	8.156433033718896	91.8435669662811
11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L001_R1	24630611	0	0	24630611	1226680	23403931	100.0	4.980306822270872	95.01969317772912
11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L002_R1	24804094	0	0	24804094	1234833	23569261	100.0	4.978343494424751	95.02165650557525
12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L001_R1	17726988	0	0	17726988	826890	16900098	100.0	4.664582612680733	95.33541738731927
12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L002_R1	17947894	0	0	17947894	838520	17109374	100.0	4.67196875577714	95.32803124422286
13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L001_R1	10155200	0	0	10155200	483696	9671504	100.0	4.7630376555853156	95.23696234441468
13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L002_R1	10571719	0	0	10571719	504840	10066879	100.0	4.7753823195641125	95.22461768043588
14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L001_R1	20161564	0	0	20161564	1092518	19069046	100.0	5.418815722827852	94.58118427717214
14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L002_R1	20308950	0	0	20308950	1105294	19203656	100.0	5.442398548423232	94.55760145157677
15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L001_R1	14884486	0	0	14884486	804968	14079518	100.0	5.408100756720789	94.59189924327922
15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L002_R1	15474989	0	0	15474989	844609	14630380	100.0	5.457897256017436	94.54210274398257
16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L001_R1	18283721	0	0	18283721	909754	17373967	100.0	4.975759584167796	95.02424041583221
16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L002_R1	18392778	0	0	18392778	917333	17475445	100.0	4.98746301401561	95.0125369859844
1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L001_R1	18650253	0	0	18650253	877369	17772884	100.0	4.704327603491492	95.29567239650851
1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L002_R1	18775626	0	0	18775626	886452	17889174	100.0	4.721291316731596	95.2787086832684
2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L001_R1	17068378	0	0	17068378	824323	16244055	100.0	4.829533304219066	95.17046669578093
2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L002_R1	17194283	0	0	17194283	835459	16358824	100.0	4.858934798269867	95.14106520173013
3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L001_R1	14053648	0	0	14053648	666624	13387024	100.0	4.743423202288829	95.25657679771118
3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L002_R1	14136867	0	0	14136867	672827	13464040	100.0	4.759378439367082	95.24062156063292
4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L001_R1	16886816	0	0	16886816	839738	16047078	100.0	4.972743233537927	95.02725676646207
4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L002_R1	16974561	0	0	16974561	846010	16128551	100.0	4.983987509308783	95.01601249069121
5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L001_R1	18589022	0	0	18589022	1276902	17312120	100.0	6.869118773435202	93.1308812265648
5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L002_R1	18754626	0	0	18754626	1290186	17464440	100.0	6.879294740401648	93.12070525959835
6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L001_R1	16435498	0	0	16435498	772091	15663407	100.0	4.697703714240968	95.30229628575903
6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L002_R1	16609441	0	0	16609441	783762	15825679	100.0	4.718774099622016	95.28122590037799
7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L001_R1	16870205	0	0	16870205	829559	16040646	100.0	4.917302427563862	95.08269757243613
7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L002_R1	16990409	0	0	16990409	838781	16151628	100.0	4.936791103733877	95.06320889626612
8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L001_R1	18744911	0	0	18744911	910296	17834615	100.0	4.856230045584105	95.14376995441589
8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L002_R1	18934000	0	0	18934000	924905	18009095	100.0	4.8848896165627975	95.1151103834372
9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L001_R1	13907609	0	0	13907609	758644	13148965	100.0	5.454884444910696	94.54511555508931
9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L002_R1	14000139	0	0	14000139	762878	13237261	100.0	5.449074469903477	94.55092553009652
test_R1	100000	0	0	100000	6932	93068	100.0	6.932	93.068