Module Section Sample Name Source Skewer all_sections 10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L001_R1.fastq-trimmed.log Skewer all_sections 10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L002_R1.fastq-trimmed.log Skewer all_sections 15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L001_R1.fastq-trimmed.log Skewer all_sections 15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L002_R1.fastq-trimmed.log Skewer all_sections 16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L001_R1.fastq-trimmed.log Skewer all_sections 4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L001_R1.fastq-trimmed.log Skewer all_sections 4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L002_R1.fastq-trimmed.log Skewer all_sections 5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L001_R1.fastq-trimmed.log Skewer all_sections 12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L001_R1.fastq-trimmed.log Skewer all_sections 12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L002_R1.fastq-trimmed.log Skewer all_sections 13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L001_R1.fastq-trimmed.log Skewer all_sections 16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L002_R1.fastq-trimmed.log Skewer all_sections 1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L001_R1.fastq-trimmed.log Skewer all_sections 1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L002_R1.fastq-trimmed.log Skewer all_sections 2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L001_R1.fastq-trimmed.log Skewer all_sections 2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L002_R1.fastq-trimmed.log Skewer all_sections 8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L001_R1.fastq-trimmed.log Skewer all_sections 5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L002_R1.fastq-trimmed.log Skewer all_sections 6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L001_R1.fastq-trimmed.log Skewer all_sections 11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L001_R1.fastq-trimmed.log Skewer all_sections 11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L002_R1.fastq-trimmed.log Skewer all_sections 13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L002_R1.fastq-trimmed.log Skewer all_sections 14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L001_R1.fastq-trimmed.log Skewer all_sections 14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L002_R1.fastq-trimmed.log Skewer all_sections 3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L001_R1.fastq-trimmed.log Skewer all_sections 3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L002_R1.fastq-trimmed.log Skewer all_sections 6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L002_R1.fastq-trimmed.log Skewer all_sections 7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L001_R1.fastq-trimmed.log Skewer all_sections 7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L002_R1.fastq-trimmed.log Skewer all_sections 8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L002_R1.fastq-trimmed.log Skewer all_sections 9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L001_R1.fastq-trimmed.log Skewer all_sections 9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L002_R1.fastq-trimmed.log Skewer all_sections test_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/test/test_R1.fastq-trimmed.log FastQC all_sections 10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L001_R1_fastqc.zip FastQC all_sections 14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L002_R1_fastqc.zip FastQC all_sections 15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L001_R1_fastqc.zip FastQC all_sections 15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/15_KO_dNs_C_RNA_HB_HLF57DRXY_CCTGCGGAAC-AGCCTATGAT_L002_R1_fastqc.zip FastQC all_sections 3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L002_R1_fastqc.zip FastQC all_sections 4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L001_R1_fastqc.zip FastQC all_sections 4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/4_CON_ut_D_RNA_HB_HLF57DRXY_AACACTGTTA-TGAGACTTGC_L002_R1_fastqc.zip FastQC all_sections 11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L002_R1_fastqc.zip FastQC all_sections 12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L001_R1_fastqc.zip FastQC all_sections 12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/12_KO_ut_D_RNA_HB_HLF57DRXY_GTATTGACGT-TTGGAATTCC_L002_R1_fastqc.zip FastQC all_sections 16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L001_R1_fastqc.zip FastQC all_sections 16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/16_KO_dNs_D_RNA_HB_HLF57DRXY_TTCATAAGGT-CCTTCTAACA_L002_R1_fastqc.zip FastQC all_sections 1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L001_R1_fastqc.zip FastQC all_sections 1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/1_CON_ut_A_RNA_HB_HLF57DRXY_CTGTTGGTCC-AACGGTCTAT_L002_R1_fastqc.zip FastQC all_sections 2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L001_R1_fastqc.zip FastQC all_sections 7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L002_R1_fastqc.zip FastQC all_sections 8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L001_R1_fastqc.zip FastQC all_sections 5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L001_R1_fastqc.zip FastQC all_sections 5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/5_CON_dNs_A_RNA_HB_HLF57DRXY_ATTGCGCGGT-GCGGAGCCAA_L002_R1_fastqc.zip FastQC all_sections 9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L002_R1_fastqc.zip FastQC all_sections 10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/10_KO_ut_B_RNA_HB_HLF57DRXY_CACGGAACAA-GTGCTAGGTT_L002_R1_fastqc.zip FastQC all_sections 11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/11_KO_ut_C_RNA_HB_HLF57DRXY_TGGAGTACTT-TCCACACAGA_L001_R1_fastqc.zip FastQC all_sections 13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L001_R1_fastqc.zip FastQC all_sections 13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/13_KO_dNs_A_RNA_HB_HLF57DRXY_CTTGTACACC-AAGCGCGCTT_L002_R1_fastqc.zip FastQC all_sections 14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/14_KO_dNs_B_RNA_HB_HLF57DRXY_ACACAGGTGG-ACAACGCTCA_L001_R1_fastqc.zip FastQC all_sections 2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/2_CON_ut_B_RNA_HB_HLF57DRXY_TTACCTGGAA-CTGGAACTGT_L002_R1_fastqc.zip FastQC all_sections 3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/3_CON_ut_C_RNA_HB_HLF57DRXY_TGGCTAATCA-CTACATGCCT_L001_R1_fastqc.zip FastQC all_sections 6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L001_R1_fastqc.zip FastQC all_sections 6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/6_CON_dNs_B_RNA_HB_HLF57DRXY_TGGCGCGAAC-AGTATCAGTT_L002_R1_fastqc.zip FastQC all_sections 7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/7_CON_dNs_C_RNA_HB_HLF57DRXY_TAATGTGTCT-TATGCCTTAC_L001_R1_fastqc.zip FastQC all_sections 8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L002_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/8_CON_dNs_D_RNA_HB_HLF57DRXY_ATACCAACGC-CGCAGCAATT_L002_R1_fastqc.zip FastQC all_sections 9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L001_R1 /mnt/bfx6/bfx/mmckenzie/echs1_rnaseq/fastq/9_KO_ut_A_RNA_HB_HLF57DRXY_AGGATGTGCT-GGAATTGTAA_L001_R1_fastqc.zip