1. Perseus software (for term enrichment analysis), Gene Ontology (GO), UniProt keywords, Pfam, InterPro, CORUM (gene set libraries).
2. Perseus version 3.7.0, No versions mentioned for other tools
3. GO, UniProt keywords, Pfam, InterPro, CORUM
4. No
5. Fisher Exact Testing with Benjamini-Hochberg correction
6. Yes