Abstract Objective The capacity of mature adipocytes to de-differentiate into fibroblast-like cells has been demonstrated in vitro and a few, rather specific in vivo conditions. A detailed comparison between de-differentiated fat (DFAT) cells and adipose stem and progenitor cells (ASPCs) from different adipose depots is yet to be conducted. Moreover, whether de-differentiation of mature adipocytes from classical subcutaneous and visceral depots occurs under physiological conditions remains unknown. Methods Here, we used in vitro "ceiling culture", single cell/nucleus RNA sequencing, epigenetic anaysis and genetic lineage tracing to address these unknowns. Results We show that in vitro-derived DFAT cells have lower adipogenic potential and distinct cellular composition compared to ASPCs. In addition, DFAT cells derived from adipocytes of inguinal origin have dramatically higher adipogenic potential than DFAT cells of the epididymal origin, due in part to enhanced NF-KB signaling in the former. We also show that high-fat diet (HFD) feeding enhances DFAT cell colony formation and re-differentiation into adipocytes, while switching from HFD to chow diet (CD) only reverses their re-differentiation. Moreover, HFD deposits epigenetic changes in DFAT cells and ASPCs that are not reversed after returning to CD. Finally, combining genetic lineage tracing and single cell/nucleus RNA sequencing, we demonstrate the existence of DFAT cells in inguinal and epididymal adipose depots in vivo, with transcriptomes resembling late-stage ASPCs. Conclusions These data uncover the cell type- and depot-specific properties of DFAT cells, as well as their plasticity in response to dietary intervention. This knowledge may shed light on their role in life style change-induced weight loss and regain. Keywords: Adipocyte de-differentiation, DFAT cell re-differentiation, NF-κB, Diet intervention, scRNA-seq/snRNA-seq, DNA methylation Highlights * • In vitro-derived DFAT cells show lower adipogenic potential and distinct transcriptional profiles compared to ASPCs. * • Inguinal DFAT cells show higher adipogenic potential than those of epididymal origin, which requires NF-κB signaling. * • HFD enhances DFAT cell colony formation and re-differentiation into adipocytes, switching to CD only reverses the latter. * • HFD feeding induces lasting epigenetic changes in DFAT cells and ASPCs that are not reversed by switching to CD. * • DFAT cells are present in inguinal and epididymal adipose depots in vivo and resemble late-stage ASPCs. 1. Introduction White adipose tissue (WAT) serves as a major storage site for excess energy in the form of triglyceride and acts as an endocrine organ that secretes various hormones and factors to maintain energy homeostasis. In addition to the white adipocytes that contain triglycerides, WAT also comprises various other cell types in the stromal vascular fraction (SVF), including adipose stem and progenitor cells (ASPCs), immune cells, vascular endothelial cells and small proportions of other cell types [[29][1], [30][2], [31][3]]. Obesity develops when calorie intake regularly exceeds the body's needs, during which WAT expands in an unhealthy way characterized by excessive hypertrophy of existing adipocytes, impaired ASPC differentiation and accumulation of proinflammatory macrophages [[32]4,[33]5]. The overloaded adipocytes are under mechanical stress, become hypoxic and eventually undergo apoptosis, leading to influx of macrophages into the tissue that activates inflammation and efflux of lipids into the neighboring non-adipose organs that causes local and systemic insulin resistance [[34]6]. On the other hand, weight loss via calorie restriction promotes adipocyte size reduction by activating lipolysis and increasing tissue sensitivity to neural and hormonal stimulation [[35]7]. Mature adipocytes have long been considered as a terminally differentiated cell type. Development of the “ceiling culture” method by Sugihara et al. in the late 1980s demonstrated the ability of mature adipocytes to de-differentiate into fibroblast-like cells in vitro [[36]8,[37]9]. During de-differentiation, adipocytes undergo morphological changes from round-shaped cells loaded with lipids to spindle-shaped fibroblast-like cells without apparent lipid droplets, accompanied by increased expression of preadipocyte marker genes [[38]10]. The resulting de-differentiated fat (DFAT) cells possess stem cell-like properties and can give rise to multiple cell lineages, including cardiomyocyte, osteoblast and chondrocyte [[39]11,[40]12]. During pregnancy and lactation, adipocytes in mammary gland have been shown to de-differentiate into preadipocyte- and fibroblast-like cells, and subsequently proliferate and re-differentiate into adipocytes after weaning [[41]13]. In addition, reversible de-differentiation of dermal adipocytes is required for hair cycling and skin repair [[42]14,[43]15]. Moreover, adipocyte de-differentiation has been shown to contribute to liposarcoma [[44]16] and mammary tumor progression [[45]17]. So far, the extent to which DFAT cells resemble ASPCs at the functional and transcriptional levels, as well as their plasticity in response to dietary interventions remain to be elucidated. The family of NF-κB transcription factors has been shown to play important roles in adipose tissue homeostasis and plasticity. This group of proteins encompasses transcriptional activators, such as RelA (p65), RelB and c-Rel, as well as repressors, including NF-κB1 (p50) and NF-κB2 (p52) [[46]18]. Inactive heterodimers of RelA and NF-κB1 are sequestered in the cytosol by IκBα [[47]19]; upon stimulation by cytokines and growth factors, IKKβ kinase becomes activated and phosphorylates IκBα, resulting in the release and nuclear translocation of RelA and NF-κB1. Adipocyte-specific deletion of IKKβ has been shown to exacerbate tissue inflammation induced by HFD [[48]20] and adipocyte cell death, as well as reduce adaptive adipose tissue remodeling and elevate lipolysis in visceral adipose depots [[49]21]. Protein levels of several NF-κB subunits, including RelA, RelB and NF-κB2 have been shown to increase during adipogenesis of 3T3-L1 cells [[50]22]. In the present study, we used cell culture models, single cell/nucleus RNA-sequencing (sc/snRNA-seq) methods, epigenetic analysis and genetic lineage tracing to characterize DFAT cells derived from subcutaneous and visceral adipose depots under different dietary interventions and uncovered the role of NF-κB signaling in regulating the re-differentiation of DFAT cells from inguinal WAT (iWAT). 2. Results 2.1. DFAT cells derived from subcutaneous and visceral fat depots have lower adipogenic potential and distinct transcriptional profiles compared to ASPCs Using a previously described in vitro “ceiling culture” method [[51]8,[52]9], we obtained DFAT cells from adipocytes isolated from iWAT and epididymal WAT (eWAT) of chow diet (CD)-fed C57BL/6J male mice. Appearance of DFAT cells was characterized by the morphological transition from round to spindle shape and gradual loss of Oil Red O staining ([53]Figure S1A), as well as elevated expression of ASPC marker genes (Pdgfra and Pdgfrb) and reduced expression of adipocyte marker genes (AdipoQ and Lep) ([54]Figure S1B). In addition, we crossed the AdipoQ^CreERT2 mouse strain that expresses a tamoxifen-inducible Cre recombinase under the control of the AdipoQ gene [[55]23] with the Ai14 strain that expresses tdTomato under the control of the Rosa26 locus in a Cre-dependent manner [[56]24] for genetic labelling of adipocytes. Six-week-old AdipoQ^CreERT2;Ai14 mice were injected with three daily consecutive shots of tamoxifen and eWAT adipocytes were collected one day after the last injection for in vitro de-differentiation. No overlap between tdTomato and PDGFRA immunostaining that labels ASPCs was observed in whole-mount eWAT tissue sections, confirming the adipocyte-specific labelling of AdipoQ^CreERT2 ([57]Figure S1C). tdTomato^+ adipocytes were found in the isolated adipocyte suspension ([58]Figure S1D), which allows us to specifically follow their in vitro de-differentiation process. By monitoring the round-shaped tdTomato^+ adipocytes in the same visual field on a daily basis, we found that most of the spindle-shaped DFAT cells retained the tdTomato signal ([59]Figure S1E), indicating that these cells are actually derived from the adipocytes. To further exclude a potential contamination of ASPCs, we also derived DFAT cells from adipocytes of Pdgfra^CreERT2;Ai14 mice whose ASPCs were labelled right before collection by tamoxifen injection. We did not find any tdTomato^+ cells in such cultures from two independent experiments (data not shown), thereby excluding a potential contamination of ASPCs in the isolated DFAT cells. To compare the adipogenic potential of DFAT cells with ASPCs, we extracted adipocytes and SVF cells in parallel from the same adipose depots (iWAT and eWAT) of CD-fed C57BL/6J mice for de-differentiation and ASPC expansion, respectively, followed by (re)-differentiation into adipocytes ([60]Figure 1A). Six days after induction of in vitro differentiation, Oil Red O staining revealed that DFAT cells have a lower adipogenic potential than ASPCs from their cognate fat depot and, among these, cells derived from eWAT always showed lower differentiation potential than those from iWAT (i.e. eWAT_DFAT < eWAT_ASPC < iWAT_DFAT < iWAT_ASPC) ([61]Figure 1B). In agreement with this, Lep mRNA levels followed the same trend ([62]Figure 1C). These results suggest that differences in adipogenic potential exist at both the cell type and the depot levels. Figure 1. [63]Figure 1 [64]Open in a new tab DFAT cells and ASPCs are different in terms of adipogenic potential and transcriptional profiles. (A) Schematic illustration of the experimental design for DFAT cell and ASPC in vitro culture. (B) Bright field images and quantification of Oil Red O staining of DFAT and SVF cells on DIV 8. n = 4 independent experiments, represented by a dot in the graph. (C) qPCR analysis of Lep mRNA level in cells that had been induced for adipocyte differentiation for 6 days. n = 4 independent experiments, represented by a dot in the graphs. Statistical significance was assessed by ordinary one-way ANOVA Tukey's multiple comparisons test in (B–C). ∗p < 0.05, ∗∗∗p < 0.001, ∗∗∗∗p < 0.0001, ns, not significant. Values were normalized to the iWAT_DFAT group and were presented as mean ± standard deviation (SD) in (B–C). (D) Uniform Manifold Approximation and Projection (UMAP) of all cell types in cultured DFAT cells and ASPCs obtained from iWAT and eWAT of C57BL/6J mice fed with CD. (E) Feature plots showing the expression patterns of ASPC and adipocyte marker genes in the ASPC population of the four datasets. Z-score was used for presentation. (F) UMAPs and cellular composition of ASPC subpopulations in the four datasets. (G) Heatmap showing the average expression of DEGs in the three ASPC subpopulations. Z-score was used for presentation. (H) Pathway enrichment analysis of the DEGs of the three ASPC subpopulations using the Gene Ontology-Biological Process gene set. (For interpretation of the references to color in this figure legend, the reader is referred