Graphical abstract graphic file with name fx1.jpg [43]Open in a new tab Highlights * • Gestational age significantly influences neonatal peripheral blood gene expression * • Whole blood transcriptomics reveal that interferon pathways are central to NARDS * • Neonates born before 34 weeks exhibit weaker immune responses to ARDS * • Blood ALOX15 and PTGDR2 are potential biomarkers and therapeutic targets for NARDS __________________________________________________________________ Transcriptomics; Machine learning Introduction Acute respiratory distress syndrome (ARDS) is a life-threatening condition caused by various etiologies, and was first described in 1967.[44]^1 Since then, diagnostic criteria of ARDS have been established for adults[45]^2 and children,[46]^3 respectively; however, these criteria do not apply to neonates. Neonatal ARDS (NARDS) remained poorly understood for decades until 2017, when the Montreux Criteria[47]^4 were specifically proposed to address the unique perinatal factors associated with neonates. Recent international multicenter researches[48]^5^,[49]^6 on NARDS have begun to uncover its basic clinical characteristics. NARDS occurs in 1.44%–1.5% of admissions, with mortality rates ranging from 12.6% to 24%. Disparities in the immaturity of pulmonary and immune system and different perinatal triggering factors may contribute to the heterogeneity of NARDS.[50]^6^,[51]^7 Early identification remains challenging due to the distinct physiological characteristics of neonatal lungs and immune systems. Respiratory distress, a common yet nonspecific manifestation, affecting 7% of deliveries.[52]^8 In addition to ARDS, which can occur in neonates born at every gestational age (GA), common causes of respiratory distress primarily include neonatal respiratory distress syndrome (NRDS) due to primary surfactant (PS) deficiency in preterm infants, and transient tachypnea of the neonate (TTN) in later period. The Montreux definition explicitly stated that the diagnosis of NARDS requires the exclusion of NRDS, TTN, or other primary acute respiratory conditions, while suggesting that a response to PS therapy and lung recruitment should be considered in confirming the diagnosis.[53]^4 No specific treatments are currently available for NARDS, while patients typically require longer courses of antibiotic therapy, mechanical ventilation and higher mortality compared to those with NRDS or TTN.[54]^5^,[55]^9 Currently, blood transcriptomics has provided valuable insights into the heterogeneity of both adult and pediatric ARDS, facilitating the identification of novel biomarkers and construction prediction model,[56]^10 classifying disease sub phenotypes,[57]^11^,[58]^12 and uncovering the underlying pathophysiological processes[59]^13 that may lead to more effective therapies.[60]^14 However, this field remains blank in NARDS. Our study seeks to bridge this gap by establishing a cohort of respiratory distress across various GA. We will integrate high-throughput sequencing and machine learning techniques to identify novel predictive biomarkers and offer new perspectives and references