Abstract Background Graft-versus host disease (GVHD) is a complication of stem cell transplantation associated with significant morbidity and mortality. Non-specific immune-suppression, the mainstay of treatment, may result in immune-surveillance dysfunction and disease recurrence. Methods We created humanised mice model for chronic GVHD (cGVHD) by injecting cord blood (CB)-derived human CD34^+CD38^−CD45RA^− haematopoietic stem/progenitor cells (HSPCs) into hIL-6 transgenic NOD/SCID/Il2rgKO (NSG) newborns, and compared GVHD progression with NSG newborns receiving CB CD34^− cells mimicking acute GVHD. We characterised human immune cell subsets, target organ infiltration, T-cell repertoire (TCR) and transcriptome in the humanised mice. Findings In cGVHD humanised mice, we found activation of T cells in the spleen, lung, liver, and skin, activation of macrophages in lung and liver, and loss of appendages in skin, obstruction of bronchioles in lung and portal fibrosis in liver recapitulating cGVHD. Acute GVHD humanised mice showed activation of T cells with skewed TCR repertoire without significant macrophage activation. Interpretation Using humanised mouse models, we demonstrated distinct immune mechanisms contributing acute and chronic GVHD. In cGVHD model, co-activation of human HSPC-derived macrophages and T cells educated in the recipient thymus contributed to delayed onset, multi-organ disease. In acute GVHD model, mature human T cells contained in the graft resulted in rapid disease progression. These humanised mouse models may facilitate future development of new molecular medicine targeting GVHD. Keywords: Acute GVHD, Chronic GVHD, IL-6, Humanised mouse Research in context Evidence before this study GVHD is an important complication of haematopoietic stem cell transplantation. Mouse models and clinical experience suggested important roles of activated T cells both in acute and chronic GVHD. GWAS studies implicated IL-6 in pathogenesis of chronic GVHD and anti-IL6R Ab has been reported to ameliorate disease status in patients with chronic GVHD. Added value of this study We created a chronic GVHD humanised mouse model by transplanting human HSPCs into hIL-6 TG NSG newborns. In this model, activation of both human T cells and macrophages was associated with tissue damage in skin, lung, and liver. We also created acute GVHD humanised mice by transplanting mature human leukocyte and myeloid cells to determine cellular and molecular distinction between acute and chronic GVHD. Through the comparison, we found that co-activation of fibrotic/sclerotic changes associated with T lymphocytes and macrophages in affected organs and higher expression of genes associated with TGF-β and SMAD signaling are characteristic of chronic GVHD. Implications of all the available evidence Our study revealed an important role of IL-6 and subsequent macrophage/T cell co-activation in the development of chronic GVHD. The preclinical humanised mouse model may serve as a beneficial tool for the investigation of chronic GVHD biology and new treatment strategy. 1. Introduction Graft-versus host disease (GVHD) is characterised by an attack of host organs by donor-derived lymphocytes, and remains as one of the serious complications following haematopoietic stem/progenitor cell transplantation (HSCT). GVHD is classified into acute (aGVHD) and chronic (cGVHD) forms according to the time of disease onset. Recently, distinct mechanisms of pathogenesis between these two forms of GVHD have been reported [[65][1], [66][2], [67][3]]. Nevertheless, the pathophysiology of cGVHD at a molecular level is not well-understood, and studies that directly compared cGVHD with aGVHD using the same donor cell source are few. Allogeneic mouse models have been developed to investigate acute and chronic GVHD [[68][4], [69][5], [70][6], [71][7], [72][8], [73][9], [74][10]]. These models supported clarification of the critical roles of T cells as well as donor- and host-derived antigen presenting cells in GVHD. Furthermore, Lockridge et al. described cGVHD in a bone marrow-liver-thymus (BLT) model of humanised NOD/SCID/Il2rgKO (NSG) mice engrafted with human fetal thymic and liver tissue under the renal capsule and injected with HSPCs [[75]11]. Sonntag et al. reported that two out of 15 NSG recipients of human CD34^+ haematopoietic stem/progenitor cells (HSPCs) showed cGVHD-like changes at 6–7 months post-transplantation [[76]12]. While these xenotransplantation models are important milestones in the development of humanised mouse models of in vivo cGVHD, they lacked appropriate humanised microenvironment in the recipient mice. In particular, we focused on human IL-6 signaling, since IL-6 gene polymorphism is associated with the development of cGVHD and anti-human IL-6 receptor monoclonal antibody (Tocilizumab) has shown some benefit in steroid-refractory cGVHD patients [[77]13,[78]14]. Here we present a humanised mouse model for cGVHD through transplantation of human cord blood (CB)-derived HSPCs without implantation of human fetal tissues in human IL-6 expressing NSG mice (hIL-6 Tg NSG). During long-term observation, these cGVHD humanised mice showed cGVHD-like changes in multiple target organs including skin, lung and liver. In addition, we created a humanised mouse model for aGVHD by transplantation of human CB-derived CD34^− mature blood and immune cells in NSG mice. Comparison of these two humanised mouse models demonstrated the unique role of macrophages in cGVHD pathogenesis. Moreover, we identified differentially expressed genes in human T cells associated with cGVHD and aGVHD humanised mice. These findings suggest that treatment strategies directed against macrophages as well as specific target molecules associated with pathogenic T cells should be considered as a future therapy for steroid-refractory GVHD. 2. Materials and methods 2.1. Human samples CB samples were obtained from the Tokai and the Chubu Cord Blood Bank under written informed consent. Peripheral blood (PB) samples were obtained from patients with cGVHD and non-GVHD HSCT recipient at Toranomon Hospital under written informed consent. All experiments were performed with authorisation from the Institutional Review Board for Human Research at RIKEN and were conducted according to the principles expressed in the Declaration of Helsinki. 2.2. Mice Human IL-6 Transgenic NSG mice (hIL-6 Tg NSG) were generated by pronuclear microinjection of BAC clone CTD-2594 N23 (GRCh37/hg19 chromosome7 22,724,723–22,964,038; BAC1), or RP11-692 K8 (GRCh37/hg19 chromosome7 22,320,340–22,505,348; BAC2) followed by backcrossing of the transgene >5 generations using a marker-assisted selection protocol from the original C57BL/6 strain onto NOD.Cg-Prkdc^scidIL2rg^tm1Wjl (NSG) mice [[79]15]. The copy numbers of the BAC transgene were estimated by quantitative PCR of chloramphenicol-resistance gene in a BAC vector using a mouse endogenous gene (RAVER2) as an internal copy-number reference. All mice were bred and maintained under SPF conditions at the animal facility of RIKEN IMS according to guidelines established and approved by the Institutional Animal Committees at RIKEN. 2.3. Purification and transplantation of human cord blood cells Human CD34^+ cells enriched using immune-magnetic beads (130–046-703, Miltenyi Biotec) were used to isolate 7AAD^−Lin^−CD34^+CD38^− or 7AAD^−Lin^−CD34^+CD38^−CD45RA^− human HSPCs using FACSAria or FACSAria III (BD Biosciences). CB CD34^− cells prepared by immune-magnetic microbeads (130–050-1014, Miltenyi Biotec) were used to isolate CB CD34^−CD3^+ cells using FACSAria. Non-Tg NSG and hIL-6 Tg NSG newborns were sublethally irradiated at 150 cGy total body irradiation using a ^137Cs-source irradiator followed by intravenous injection via the facial vein. To create cGVHD humanised mice, 1.7 × 10^3 to 4.5 × 10^4 HSPCs were transplanted. To create aGVHD humanised mice, 10^5 to 10^6 CD34^− or CD34^−CD3^+ cells were transplanted. To create non-Tg NSG humanised mice, 7.2 × 10^3 to 4.2 × 10^5 HSPCs were transplanted. When recipients became moribund (reduced activity or tachypnea), these mice were euthanised and analysed. Non-Tg NSG humanised mice were euthanised concomitantly as controls. Antibodies used for flow cytometric analysis and cell sorting are listed in Supplementary materials and methods. 2.4. RNA-seq analysis Total RNA was extracted from human T cells and mouse keratinocytes obtained from hIL-6 Tg NSG humanised mice (n = 5), acute GVHD humanised mice (n = 2), non-Tg NSG humanised mice (n = 2), and non-transplanted non-Tg NSG control mice (n = 3) using Trizol (ThermoFisher Scientific). RNA sequencing data are deposited in the National Bioscience Database Center. RNA-seq libraries were prepared using an NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) according to the manufacturer's protocol and were sequenced using a HiSeq1500 DNA sequencer (Illumina single read, 50 bp). The sequence reads were mapped to mouse genome (NCBI version 37) or human genome (NCBI version 19) using TopHat2 (version 2.0.8) and bowtie2 (version 2.1.0) with default parameters and gene annotation was provided by the NCBI RefSeq. The transcript abundances were estimated using Cufflinks (version 2.1.1). Cufflinks was run with the same reference annotation with TopHat2 to generate FPKM (fragments per kilobase per million mapped reads) values for known gene models. 2.5. Transcription factor (TF) enrichment analysis Enrichment analysis to evaluate effect of a TF on their binding target genes was performed as described previously [[80]16]. Briefly, we compared the mean fold changes of gene expression of target genes of a TF against that of the background (whole genes). To consider heterogeneous frequencies of TF binding among target genes, we used a weighted t-test procedure into a parametric gene set enrichment analysis. The frequency of binding of a TF to their target genes was evaluated based on the numerous high-throughput chromatin immunoprecipitation (ChIP) experiments obtained from the gene expression omnibus database (GEO, [81]www.ncbi.nlm.nih.gov/geo/). We used the weighted t-statistic as an enrichment score indicating the relative activity of a TF. 2.6. TCR sequencing Total RNA was extracted from human T cells in hIL-6 Tg NSG humanised mice and acute GVHD humanised mice using Trizol (ThermoFisher Scientific). TCR-seq libraries were prepared using a SMARTer Human TCR a/b Profiling Kit (Clontech Laboratories, Inc.) according to the manufacturer's protocols and were sequenced on a Miseq DNA sequencer (Illumina). The human TCR repertoires were analysed using MiXCR [[82]17]. 2.7. Measurement of human cytokine /chemokine levels Plasma cytokine/chemokine levels in humanised mice and patient samples were measured using the Bio-Plex system (Bio-Rad) with Bio-Plex Human Cytokine 27-Plex and 21-Plex Assay kits (Bio-Rad). 2.8. Statistical analysis The numerical data are presented as means ± SEM. Statistical analyses (two-tailed t-tests and one-way ANOVA with Bonferroni post-test) were performed using Microsoft Excel. The differences were determined by two-tailed t-tests unless otherwise indicated. P value <.05 was considered statistically significant. Statistics for Kaplan-Meier analysis were obtained using EZR (Saitama Medical Center, Jichi Medical University, Saitama, Japan), which is a graphical user interface for R (The R Foundation for Statistical Computing, Vienna, Austria) [[83]18]. 3. Results 3.1. hIL-6 Tg NSG humanised mice transplanted with human HSPCs develop cGVHD-like changes We created human IL6 transgenic NSG mice (hIL-6 Tg NSG) by microinjecting a bacterial artificial chromosome (BAC) containing the human IL6 gene (clone: 2594 N23 or 692 K8) into C57BL/6 mice and backcrossing onto the NSG background. The BAC transgene was stably propagated in a Mendelian inheritance mode and their copy numbers in mouse clones BAC3 and BAC32 were estimated to be 2.0 copies and 2.9 copies per haploid genome on average of triplicated measurements, respectively. Plasma hIL-6 levels in hIL-6 Tg NSG mice were elevated at baseline (IL-6, n = 2: IL-6#1 63.4 pg/ml, IL-6#2 60.7 pg/ml) while non-transgenic NSG mice showed background levels of human IL-6 in plasma (NSG, n = 2: NSG#1 0.5 pg/ml, NSG#2 0.6 pg/ml). To create cGVHD humanised mouse, we transplanted human CB-derived HPSCs into sublethally-irradiated hIL-6 Tg NSG newborns. At 20 to 43 weeks post-transplantation, all hIL-6 Tg NSG humanised mice developed signs of weakness including ruffled fur, anemia and reduced mobility (n = 58). In 22 out of 58 these mice, we found macroscopic skin lesions consistent with skin cGVHD. We examined human immuno-haematopoietic reconstitution in 18 out of 22 and found long-term multi-lineage engraftment of human CD19^+ B cells, CD33^+ myeloid cells, CD3^+ T cells, and CD56^+ natural killer cells in the bone marrow (BM) and spleen of hIL-6 Tg NSG mice (Representative flow cytometry plots shown in [84]Fig. 1a, [85]Table S1). Engrafted human T cells were predominantly TCRαβ^+ T cells. Interestingly, the frequency of Foxp3^+ Tregs was lower in hIL-6 Tg NSG humanised mice (hIL-6 Tg, n = 14: 5.7 ± 0.9%, non-Tg NSG, n = 11: 10.5 ± 0.6%, p = .0004; [86]Fig. 1b). Analysis of Foxp3+ Treg subsets CD45RA^+Foxp3^lo naïve Tregs (nTregs), CD45RA^−Foxp3^hi effector Tregs (eTregs) and CD45RA^−Foxp3^lo non-Tregs (non-Tregs) (Representative flow cytometry plots in [87]Fig. 1b) [[88]19] showed reduction of both naïve (p = 0.02) and effector (p = 0.03) fractions in the spleen of hIL-6 Tg NSG humanised mice (non-Tg NSG, n = 11: nTregs 0.5 ± 0.1%, eTregs 3.9 ± 0.6%; IL-6, n = 7, nTregs 0.1 ± 0.04%, eTregs 1.8 ± 0.6%; [89]Fig. 1c). Fig. 1. [90]Fig. 1 [91]Open in a new tab Reconstitution of human immunity in hIL-6 Tg NSG mice. (a) Representative flow cytometry plots of a hIL-6 Tg NSG humanised mouse (IL6#1–1) demonstrating the engraftment of human CD19^+ B cells, CD33^+ myeloid cells, CD3^+ T cells, and CD56^+ NK cells in BM and spleen. (b) Representative flow cytometry plots showing splenic Treg subsets in a hIL-6 Tg NSG humanised mouse (IL6#1–1). Foxp3^+ Tregs are classified into CD45RA^+Foxp3^lo naïve Tregs (I), CD45RA^−Foxp3^hi effector Tregs (II), and CD45RA^−Foxp3^lo non-Tregs (III). (c) Frequency of Foxp3^+ Tregs in the spleen are lower in hIL-6 Tg NSG humanised mice (NSG: n = 11, IL-6: n = 14), with significant reduction in naïve Tregs and effector Tregs (NSG: n = 11, IL-6: n = 7) (*p = 0.0004, **p = 0.02, ***p = 0.03). Error bars represent mean ± SEM. (d) T cell-dominant engraftment was found in the skin of hIL-6 Tg NSG humanised mouse as shown by representative flow cytometry plot (IL6#1-1). We performed histological examination of the skin, lung and liver in hIL-6 NSG humanised mice with and without macroscopic skin lesions. We found infiltration of human T cells in the macroscopically-apparent skin lesions in all 14 mice examined (Representative flow cytometry plots shown in [92]Fig. 1d). We performed histological examination of the skin in 27 mice (with macroscopic skin lesions: n = 14; no macroscopic skin lesions: n = 13). In 21 of 27, we found epidermal thickening, interface dermatitis (vacuolar changes beneath basal keratinocytes), reduced numbers of adipocytes, reduced numbers of hair follicles and infiltration of human CD4^+ and CD8^+ T cells in epidermis and dermis ([93]Fig. 2a). These abnormalities were present even in 7 of 13 recipients with no macroscopic skin lesions. In three out of 14, sclerotic changes were present in the dermis. Altered expression of cytokeratins may trigger or exacerbate inflammatory skin diseases [[94]20]. We found ectopic expression of cytokeratin 17 and reduced expression of cytokeratin 13 in skin sections of hIL-6 Tg NSG humanised mice, suggesting possible role of these cytoskeletal filaments in skin pathology [[95]21,[96]22] (Fig. S1). In 19 of 27 examined, hIL-6 Tg NSG humanised mice lungs showed infiltration of human T cells in peri-vascular areas, obstruction of bronchioles, and peri-bronchiolar areas with fibrotic changes ([97]Fig. 2b). In 13 of 21 mice examined, we found reduction of cytokeratin 19-positive small bile ducts in the liver and obstruction of portal triads presumably as a consequence of chronic inflammation ([98]Fig. 2c). These histopathological findings are consistent with cGVHD in skin, lung and liver of mice with macroscopically normal skin as well as those with macroscopically appreciable skin lesions. Notably, cGVHD-like changes were found in the majority of mice examined whether or not macroscopic skin lesions were present. These changes were not found in non-Tg NSG humanised mice and untransplanted NSG and hIL-6 Tg mice ([99]Fig. 2 and Fig. S2) [[100]23]. Fig. 2. [101]Fig. 2 [102]Open in a new tab Histological analysis of cGVHD humanised mice. Histological analysis of (a) skin, (b) lung and (c) liver from hIL-6 Tg NSG humanised mice with a hIL-6 non-Tg NSG humanised mouse as control. (a) H&E and immunohistochemical staining is consistent with interface dermatitis with epidermal thickening associated with infiltration of CD4^+ and CD8^+ T cells in cGVHD humanised mice. White arrow shows sclerotic and thickened upper dermis (IL6#2-1). (b) Pulmonary sections of the same recipients show infiltration of CD4^+ T and CD8^+ T cells. (c) Infiltration of human CD45^+ leucocytes including CD3^+ T cells is detected in the liver of cGVHD humanised mice. In contrast, a non-Tg NSG humanised mouse (NSG#12-1) shows normal skin, lung and liver histology. Scale bars: Low magnification 100 μm; high magnification 50 μm. 3.2. Both cGVHD and aGVHD humanised mice show T cell activation Although damage to host organs mediated by activated T cells is found in both aGVHD and cGVHD, distinct mechanisms underlying the activation of donor T cells in these two clinical entities are not fully understood. To evaluate the differences between aGVHD and cGVHD, we created an aGVHD humanised mouse model by transplanting human CB-derived CD34-negative mature haematopoietic cells (n = 16) or CD34^−CD3^+ T cells (n = 10) into non-Tg NSG newborns ([103]Table S2). CB-derived CD34-negative cells contain T cells, B cells, myeloid cells and NK cells (CD34- cells, n = 10: CD3^+ cells 26.8 ± 3.6%; CD19^+ cells 22.3 ± 5.4%; CD33^+ cells 33.4 ± 5.9%; CD56^+ cells 14.3 ± 3.4%, Fig. S3). Unlike hIL-6 Tg NSG cGVHD humanised mice, onset of disease was rapid in aGVHD humanised mice with 23 of 26 recipients becoming moribund within 73 days of transplantation. Early onset of GVHD in these recipients led to reduced survival compared with cGVHD humanised mice ([104]Fig. 3a). Vast majority of human CD45^+ leukocytes in the PB, spleen, liver, lung, gastrointestinal tract and skin of the aGVHD humanised mice were CD3^+ T cells ([105]Table S2 and Fig. S4a). Nine of 26 recipients developed macroscopically-apparent skin lesions. Histological analysis of the skin showed epidermal thickening with human T cell infiltration and ectopic cytokeratin 17 expression in the epidermis [[106]21,[107]22] ([108]Fig. 3b, Fig. S1). Infiltration of human T cells was also observed in the liver and small intestine, major target organs of clinical aGVHD (Fig. S4a, [109]Fig. 3b). Histologically, sclerotic changes and reduction of bile ducts were absent in aGVHD humanised mice, in contrast to hIL-6 Tg NSG cGVHD humanised mice ([110]Fig. 3b and Fig. S4b). Fig. 3. [111]Fig. 3 [112]Open in a new tab Comparison between hIL-6 Tg NSG cGVHD humanised mice and human aGVHD humanised mice. (a) Kaplan-Meier plot showing reduced survival of both cGVHD humanised mice (n = 58, black) and aGVHD humanised mice (n = 26, red) compared with non-Tg NSG humanised mice (n = 15, blue) (cGVHD vs. non-Tg, p = 0.000225; aGVHD vs. non-Tg, p = 1.68 × 10^−7; cGVHD vs. aGVHD, p = 2.11 × 10^−22 by log-rank test). (b) Histological analyses of skin, liver and small intestine of an aGVHD humanised mouse (acute#A-1). Bars: (far left) 100 μm; (the others) 50 μm. (c) Representative flow cytometry plots of a cGVHD humanised mouse (IL6#2-1). (d) Frequency of IFN-γ and IL-17A producing splenic T cells in non-Tg NSG humanised mice (NSG-IFN-γ+, n = 11, NSG-IL-17A+, n = 9), aGVHD humanised mice (aGVHD: n = 12), and cGVHD humanised mice (IL6-IFN-γ+, n = 11, IL6-IL-17A+, n = 5). *P = 0.005, **P = 0.004, ***P < 0.0001 by 1-way ANOVA with Bonferroni post-test. Error bars represent mean ± SEM. (e) Plasma cytokine/chemokine concentration of cGVHD humanised mice (Black: IL-6, n = 8), aGVHD humanised mice (Red: aGVHD, n = 6) and non-Tg NSG humanised mice (Blue: NSG, n = 5). (For interpretation of the references to colour in this figure legend, the reader is referred to