Abstract Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is a disease now well-documented as having arisen commonly from a viral infection, but also from other external stressors, like exposure to agricultural chemicals, other types of infection, surgery, or other severe stress events. Research has shown these events produce a systemic molecular inflammatory response and chronic immune activation and dysregulation. What has been more difficult to establish is the hierarchy of the physiological responses that give rise to the myriad of symptoms that ME/CFS patients experience, and why they do not resolve and are generally life-long. The severity of the symptoms frequently fluctuates through relapse recovery periods, with brain-centered symptoms of neuroinflammation, loss of homeostatic control, “brain fog” affecting cognitive ability, lack of refreshing sleep, and poor response to even small stresses. How these brain effects develop with ME/CFS from the initiating external effector, whether virus or other cause, is poorly understood and that is what our paper aims to address. We propose the hypothesis that following the initial stressor event, the subsequent systemic pathology moves to the brain via neurovascular pathways or through a dysfunctional blood-brain barrier (BBB), resulting in chronic neuroinflammation and leading to a sustained illness with chronic relapse recovery cycles. Signaling through recognized pathways from the brain back to body physiology is likely part of the process by which the illness cycle in the peripheral system is sustained and why healing does not occur. By contrast, Long COVID (Post-COVID-19 condition) is a very recent ME/CFS-like illness arising from the single pandemic virus, SARS-CoV-2. We believe the ME/CFS-like ongoing effects of Long COVID are arising by very similar mechanisms involving neuroinflammation, but likely with some unique signaling, resulting from the pathology of the initial SARS-CoV-2 infection. The fact that there are very similar symptoms in both ongoing diseases, despite the diversity in the nature of the initial stressors, supports the concept of a similar dysfunctional CNS component common to both. Keywords: ME/CFS, Long COVID, systemic inflammation, neuroinflammation, disease persistence, relapse Introduction Since the 1930s, when documentation of post-viral fatigue illnesses first occurred, there have been 75 reported outbreaks of probable viral origin that have led to long-term diseases that have the profile of Myalgic Encephalomyelitis/Chronic Fatigue syndrome (ME/CFS). Of these, the most publicized have been Los Angeles (1934) ([37]1), Akureyri, Northern Iceland (1946–1948) ([38]2), the Royal Free Hospital in London (1955) ([39]3), Incline Village, Nevada (1984) ([40]4), and in New Zealand, Tapanui (1984) ([41]5). That outbreak has become known in New Zealand's “health folklore” as “Tapanui flu.” The name ME originated from the London outbreak, and the name CFS from that in Incline Village, Nevada. These were outbreaks where the initial infectious agent affected a relatively modest number of people in the hundreds in stark contrast to the current pandemic where nearly 500 million to date have been affected. The condition in recent times generally has become referred to as ME/CFS, the combined name derived from the European and American outbreaks. Connections among these disease outbreaks are discussed more comprehensively in Van Elzakker et al. ([42]6). Despite their frequency and documented occurrence over a relatively long period of time, little research investment into their understanding has occurred, perhaps because the outbreaks were isolated geographically, involved relatively few people each time and, despite being highly debilitating and lifelong, were dwarfed in importance by the more common abundant non-communicable diseases. The underlying biology of ME/CFS has not been well-understood, with blood screens using standard laboratory tests falling within the normal range. Although these affected patients were obviously ill, they were given a “clean bill of health” often with no medical incentive to dig deeper into the condition. The worldwide prevalence of ME/CFS has been reported as between 0.4 and 2.6% among countries and cultures meaning it is ~10-fold more prevalent than other fatigue illnesses like multiple sclerosis ([43]7). The lack of conclusive biomarkers for a diagnostic laboratory test and the ill-defined pathophysiology have hindered an understanding of the disease. There have been up to 20 different clinical case definitions proposed, and while the Fukuda 1994 diagnostic criterion has been commonly used by researchers and clinicians ([44]8), more recent criteria like the Canadian Consensus Criteria (2003) developed by an international ME panel of experts are now favored ([45]9). These criteria focused on core symptoms of post-exertional malaise, fatigue, sleep dysfunction, and cognitive dysfunction. Additionally neurological and autonomic/neuroendrocrine/immune symptom groups were included ([46]9). These were further refined in 2011 to include emphasis on inflammation, neuropathology and energy impairments ([47]10). Starting in the mid 1980's, the number of studies has accelerated to reveal biological dysfunctions in many physiological systems. The known features of the pathogenesis of ME/CFS have recently been elegantly summarized and compared with what was known in the early stages of the post-COVID-19 syndrome ([48]11). They speculated the pathogenesis of this illness may be similar to ME/CFS. Ironically, not long before the current viral outbreak of SARS-CoV-2, wider interest and investment in ME/CFS research began to increase, following publication of the US National Academy of Science's Institute of Medicine report in 2015 ([49]12) that affirmed ME/CFS was a serious disease and had not received proper acknowledgment and recognition from