Abstract Exogenous melatonin (MT) is widely used in fruit preservation, and can increase the storage time and delay the quality deterioration. Firstly, it was found that 150 μM MT was the optimal concentration to treat ‘Xinli No.7’ under storage at 4 °C for 60 days. MT could significantly improve oxidase activity and inhibit the reduction of physiological indexes, including pulp hardness, weight loss, titratable acid and soluble solid content. MT could also reduce ethylene release and limit the reduction of fruit aroma. The average content of fruit aroma substance increased by 43.53%. A relevant RNA-Seq database was built to further explore the regulation mechanism of MT. A total of 2,761 differentially expressed genes (DEGs) were identified. DEGs were enriched in 64 functional groups and 191 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. DEGs were mainly enriched in alpha-linolenic acid metabolism, fatty acid metabolism and plant hormone signal transduction pathway. The gene pycom09g05270 belonging to long chain acyl-CoA synthetase family and participating in fatty acid metabolism pathway was identified, and its expression level was consistent with fragments per kilobase per million mapped reads (FPKM) values, implying that pycom09g05270 might play a vital role in maintaining quality during the storage process. Keywords: Pear, Melatonin, Aroma Introduction Pear (Pyrus) is one of the three largest deciduous fruit trees in the world, and fruit aroma is one of the important indexes to evaluate the quality of pear fruit and determine consumers’ preference. Occidental pear varieties have richer fruit aromas as compared to Oriental varieties. The fruit aroma and storage are affected by some irreversible physiological and biochemical reactions occurring inside the fruit along with fruit ripening and development ([38]Jia et al., 2018). On the other hand, the pear fruit aroma would become weak under low temperature storage, which leads to a decrease in the edible quality and commercial value. Exogenous melatonin (MT) (N-acetyl-5-methoxytryptamine) can limit the decrease in fruit aroma during storage and prolong the storage time. MT is a kind of indole small molecule substance which is widely spread in animals and plants ([39]Jang, Zu & Center, 2015; [40]Wang, Yang & Li, 2016; [41]Jemima, Bhattacharjee & Singhal, 2011), and was discovered in the pineal gland of cattle. Initial research held that the substance only existed in animals and humans. Until 1995, [42]Hattori, Migitaka & Iigo (1995) found that MT was also present in some plants, such as wheat and corn. Afterwards, MT was discovered in roots, leaves and flowers of plants ([43]Hattori, Migitaka & Iigo, 1995). Studies have shown that MT can scavenge reactive oxide species (ROS) ([44]Lei, Wang & Tang, 2013; [45]Pieri, Moroni & Marra, 1995), regulate fruit maturity and senescence ([46]Gao, Zhang & Chai, 2016; [47]Xin, Si & Kou, 2017; [48]Hu, Li & Rao, 2018) and improve stress resistance ([49]Lei et al., 2010; [50]Jia et al., 2019). In addition, MT has also been proven to have a better preservation effect on fruits and vegetables. In peach, MT treatment could reduce decay rate, delay senescence and maintain total soluble solids and ascorbic acid content during storage ([51]Gao, Zhang & Chai, 2016). A total of 0.2 mM MT could delay ripening, maintain and improve quality of mangoes via inhibiting hydrolytic enzymes and enhancing the antioxidant system ([52]Awad & Al-Qurashi, 2021). In the apple ripening process, the malondialdehyde (MDA) content was negatively correlated with the MT content. This may be due to the fact that MT can remove the ROS produced by the respiratory jump to maintain the redox balance in the cell ([53]Lei, Wang & Tang, 2013). Additionally, MT could regulate ROS signaling followed by activation of the calcineurin B-like 1-interacting protein kinases 23 (CIPK23) pathway to regulate the expression of the potassium channel protein gene, which then promotes K^+ absorption ([54]Li et al., 2016). MT could inhibit ethylene biosynthesis to alleviate O[3] stress in grape leaves ([55]Liu et al., 2021). The ability of MT to scavenge radicals is higher than that of vitamin E, ascorbic acid and glutathione, and it is an efficient redox balance agent ([56]Pieri, Moroni & Marra, 1995). In cucumber, MT could inhibit the respiration rate and reduce ethylene release, MDA content and active oxygen content during storage ([57]Xin, Si & Kou, 2017). The carrot suspension cell line treated with MT could better maintain the function and integrity of the cell membrane under low temperature stress ([58]Jia et al., 2019). A total of 100 μmol·L^−1 exogenous MT treatment could alleviate the decrease in chlorophyll, ascorbic acid (Vc), titratable acid and soluble protein contents, inhibit membrane lipid peroxidation and maintain membrane function and integrity of cucumber after harvest ([59]Xin, Si & Kou, 2017). In cabbage tissues stored at low temperature after harvest, MT could increase the activity of superoxide dismutase (SOD) and peroxidase (POD), reduce MDA accumulation, delay chlorophyll degradation and maintain soluble sugar and soluble protein contents in stem and leaf tissues ([60]Jia et al., 2019). In plum fruits, suitable concentration of MT treatment could keep the contents of fruit soluble solids and titratable acid stable and ensure the fruit flavor and quality ([61]Feng et al., 2020). MT could inhibit phenolic compound metabolism and improve antioxidant capacity to delay the surface discoloration of fresh-cut Chinese water chestnuts and prolong the shelf life ([62]Xu et al., 2022). MT can induce ethylene synthesis and signal transduction, inhibit the accumulation of free radicals and membrane lipid peroxidation and promote fruit maturity and delay fruit senescence. However, research on the effect of MT on pear fruits are few and mainly focus on the quality. MT can participate in antioxidant and antibacterial process in ‘Huangguan’ pear during storage. [63]Liu (2019) studied the effects of 100 µmol·L^−1 MT on the softening and senescence of three Western pear cultivars after low temperature storage and further analyzed aroma components change of ‘Korla pear’ and ‘Abate’. However, the suitable concentration of MT treatment in the process of low temperature storage was not explicably stated. Until now, the molecular mechanism of MT in regulating pear fruit aroma is still unclear. In this study, six MT concentrations were used to treat ‘Xinli No.7’ fruits before storage at low temperature. The pulp hardness, weight loss rate, soluble solid content, titratable acid, MDA, POD, SOD, ethylene release rate, fruit aroma content and aroma components were measured at different storage days. Treating the fruits of ‘Xinli No.7’ with 150 µmol·L^−1 MT can significantly maintain the physiology quality of pear and delay aroma decrease during low temperature storage. Gene expression types and abundance of MT-treated pear fruits during low temperature storage were further analyzed using digital expression profiling technology. Hence, the key genes involved in regulating aroma production under low temperature were identified and the molecular mechanism of MT in the regulation of fruit aroma was explored. Materials and Methods Experimental materials ‘Xinli No.7’ is one of the filial generations of ‘Korla pear’ × ‘ZaoSu’, which belongs to P. sinkiangensis and is a new early-maturing pear variety. Additionally, the scientific name is P. sinkiangensis Xinli No.7. Xinli No.7 fruits were collected from Tianping Lake Experimental Demonstration Base of Shandong Institute of Pomology. The pear fruits with uniform maturity, uniform size and without mechanical damage were selected and divided into six groups. Six concentrations (0, 50, 100, 150, 200 and 250 µmol·L^−1) of MT solution were set to treat six pear groups. The pears were immersed in MT solution for 30 min, and then dried in natural conditions and stored at 4 °C. Afterwards, the physiological indicators were determined at 20, 40, 60 and 80 days after storage. Additionally, the MT was purchased from Solarbio (Cas:73-31-4) and dissolved with dimethyl sulfoxide (DMSO). Analysis of physiological indexes The fruits treated with different MT concentrations and stored at 4 °C were taken out every 20 days to measure physiological data and enzyme activity. Pulp hardness was measured using a GY-4 hardness tester. The skin was peeled off the carcass of the fruit, and the hardness of the sunny side and the dark side of each fruit was measured. The weight loss rate of pear under treatment with MT and storage at 4 °C were calculated using the following formula: weight loss rate (%) = (initial weight − post storage weight)/initial weight × 100. Firstly, the weight of MT-treated pear before storage was recorded, and the same pears were taken after storage for 20, 40, 60 and 80 days to weigh and record the weight. Then, the weight loss rate was calculated. The soluble solid contents of pear were measured using ATAGO-PAL-Q type digital refractometer. The detection mirror was cleaned with distilled water, then adjusted to zero for calibration, and the detection mirror was dried with lens wiping paper. Squeezed juice was dropped on the detection mirror of the refraction instrument for measurement, and the value on the digital display device was read. Each treatment was repeated three times. The titratable acid content of fruits was determined using the sodium hydroxide titration method. Firstly, 5 g pulp was weighed and grinded into homogenate in a mortar, and transferred into 50 ml conical bottle. The solution was placed in a water bathed for 30 min at 80 °C, and then cooled to room temperature. Afterwards, the solution was centrifuged at 10,000 g for 10 min, and the precipitation was removed. The supernatant was added into a 50 ml volumetric flask and then distilled water was added into it until it reached 50 ml. The supernatant solution was blended, and 10 ml supernatant solution was taken for determination of acid content. Total of ~3–5 drops of phenolphthalein indicator were added into the 10 ml supernatant solution, and 0.10 mol·L^−1 NaOH standard liquid was added until the solution turned red and did not fade for 30 s. Each treatment was repeated three times. The titratable acid content of pear under treatment with MT and storage at 4 °C was calculated using the following formula: titratable acid content (%) = (C × V[1] × k × V[T])/m × V[S]. C, V[1], k, V[T], m and Vs represent concentration of NaOH standard solution (mol·L^−1), the volume of NaOH standard liquid (ml), organic acid conversion factor, constant volume after extraction (ml), sample quality (g) and volume of sample solution used for titration (ml), respectively. Analysis of enzyme activity Firstly, 2 g pulp was weighed and put into a precooled mortar. A total of 5 ml pre-cooled 100 mmol· L^−1 phosphoric acid buffer with pH 7.0 was added into the mortar, and then, a little of 1% polyvinylpyrrolidone (PVP) and a small amount of quartz sand were added. The homogenate was ground in an ice bath and centrifuged at 10,000 rpm and 4 °C for 20 min. The supernatant was the crude enzyme extract for determination of malondialdehyde content and antioxidant enzyme activity. MDA content was measured using the thiobarbituric acid (TBA) method. The solution of 0.6%TBA (2 ml) was added to the supernatant (2 ml) and the water was used as references, respectively. The solution was mixed