To answer your questions regarding the pathway enrichment analysis conducted in the scientific article, let's review the relevant sections: 1. **What tool was used for pathway enrichment analysis?** - The article mentions using "IPA" (Ingenuity Pathway Analysis) as the bioinformatics analysis tool. 2. **Was a tool version number provided?** - No specific version number of IPA is mentioned in the text. 3. **What gene set library was queried (e.g., GO, KEGG, Reactome or other)?** - The article does not specify which particular gene set libraries (like GO, KEGG, Reactome) were used within IPA for pathway enrichment analysis. 4. **Was a background gene list defined for pathway enrichment analysis?** - It is not explicitly stated whether a specific background gene list was defined in the text provided. 5. **What statistical test was used for enrichment analysis?** - The article does not specify which statistical test was employed by IPA for enrichment analysis. 6. **Was false discovery rate correction used to control the number of false positives in the pathway enrichment analysis?** - There is no mention of whether false discovery rate (FDR) correction was applied in this study. Here's a summary table based on the information available: | Question | Answer | |----------|--------| | Tool used for pathway enrichment analysis | IPA | | Tool version number provided | Not described | | Gene set library queried | Not described | | Background gene list defined | Not described | | Statistical test used for enrichment analysis | Not described | | False discovery rate correction applied | Not described | If more details are needed, they would need to be obtained directly from the full article or supplementary materials where such specifics might be provided.