date generated: 2022-09-07

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                     ctrl    Acss2KD
## 0610009B22Rik -0.5488684 -0.3845554
## 0610009L18Rik  0.7010761  0.7909020
## 0610010K14Rik -0.2062781  0.5031172
## 0610012G03Rik -1.0685616 -0.5693632
## 0610030E20Rik  1.0067021  1.1957467
## 0610040J01Rik -0.6151338 -1.1105356
Here are some metrics about the input data profile:
Profile metrics
Profile metrics
num_genes_in_profile 9217
duplicated_genes_present 0
num_profile_genes_in_sets 2740
num_profile_genes_not_in_sets 6477
profile_pearson_correl 0.17981
profile_spearman_correl 0.12982

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: https://ziemann-lab.net/public/msigdb_mouse/reactome.v5.2.symbols_mouse.gmt
Gene sets metrics
Gene sets metrics
num_genesets 674
num_genesets_excluded 212
num_genesets_included 462

Gene sets by quadrant


Number of significant gene sets (FDR<0.05)= 32

Interactive enrichment scatterplot

All sets with FDR<0.05. Try hovering over the points.

Top N sets irrespective of FDR. Try hovering over the points.

A heatmap of S values for top results


A plot of effect size versus significance


Significance is the -log2(p.adjustMANOVA) and effect size is the s.dist which is the hypotenuse of the s scores.

Results table

Top N= 50 gene sets
set setSize pMANOVA p.adjustMANOVA s.dist s.ctrl s.Acss2KD p.ctrl p.Acss2KD
REACTOME CITRIC ACID CYCLE TCA CYCLE 19 3.62e-09 1.04e-07 0.799 -0.78400 0.1550 3.23e-09 2.42e-01
REACTOME PEPTIDE CHAIN ELONGATION 66 2.57e-26 3.95e-24 0.741 0.71500 -0.1960 9.48e-24 5.89e-03
REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION 13 1.30e-05 2.87e-04 0.722 -0.67400 0.2610 2.61e-05 1.03e-01
REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX 41 7.95e-16 3.06e-14 0.720 0.68600 -0.2170 2.90e-14 1.64e-02
REACTOME RESPIRATORY ELECTRON TRANSPORT 59 1.07e-19 6.17e-18 0.692 -0.69100 0.0419 4.36e-20 5.79e-01
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING 12 2.22e-04 4.47e-03 0.687 -0.68400 -0.0687 4.14e-05 6.81e-01
REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S 48 1.86e-16 8.61e-15 0.683 0.66000 -0.1720 2.43e-15 3.93e-02
REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION 85 2.90e-28 6.70e-26 0.680 0.66000 -0.1640 7.31e-26 9.06e-03
REACTOME SIGNALING BY HIPPO 15 8.57e-05 1.80e-03 0.659 -0.14700 -0.6420 3.26e-01 1.66e-05
REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS 73 4.12e-21 3.18e-19 0.647 -0.64600 0.0254 1.29e-21 7.09e-01
REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE 88 1.08e-24 1.00e-22 0.622 0.59900 -0.1660 2.59e-22 7.27e-03
REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX 11 1.51e-03 2.50e-02 0.593 -0.53700 0.2520 2.04e-03 1.48e-01
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION 82 5.39e-21 3.56e-19 0.592 0.57100 -0.1590 4.29e-19 1.30e-02
REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT 107 5.12e-26 5.91e-24 0.591 -0.58800 0.0620 8.74e-26 2.69e-01
REACTOME TRANSLATION 123 5.64e-30 2.60e-27 0.586 0.57300 -0.1230 6.07e-28 1.89e-02
REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS 11 4.25e-03 5.78e-02 0.548 0.51600 -0.1870 3.07e-03 2.84e-01
REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX 84 2.90e-18 1.49e-16 0.547 0.53100 -0.1280 3.98e-17 4.23e-02
REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE 38 1.00e-07 2.44e-06 0.512 -0.49600 0.1280 1.25e-07 1.72e-01
REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA 11 1.93e-02 1.84e-01 0.483 -0.01570 0.4830 9.28e-01 5.54e-03
REACTOME INFLUENZA LIFE CYCLE 113 6.91e-16 2.90e-14 0.444 0.44000 -0.0627 7.87e-16 2.51e-01
REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS 11 6.21e-02 3.19e-01 0.436 0.27400 0.3380 1.15e-01 5.20e-02
REACTOME TRAF6 MEDIATED NFKB ACTIVATION 13 4.65e-02 2.76e-01 0.422 0.27700 0.3180 8.38e-02 4.74e-02
REACTOME EXTENSION OF TELOMERES 13 2.06e-02 1.86e-01 0.418 0.34800 -0.2320 2.98e-02 1.48e-01
REACTOME PYRUVATE METABOLISM 16 9.30e-03 1.16e-01 0.415 -0.35700 0.2120 1.34e-02 1.43e-01
REACTOME SHC1 EVENTS IN ERBB4 SIGNALING 13 2.41e-02 1.97e-01 0.410 0.34200 -0.2260 3.29e-02 1.58e-01
REACTOME SHC MEDIATED SIGNALLING 13 2.44e-02 1.97e-01 0.409 0.33700 -0.2320 3.57e-02 1.47e-01
REACTOME O LINKED GLYCOSYLATION OF MUCINS 10 1.16e-01 4.24e-01 0.402 -0.32000 -0.2440 8.02e-02 1.81e-01
REACTOME INHIBITION OF THE PROTEOLYTIC ACTIVITY OF APC C REQUIRED FOR THE ONSET OF ANAPHASE BY MITOTIC SPINDLE CHECKPOINT COMPONENTS 15 2.00e-02 1.84e-01 0.392 0.19900 -0.3380 1.82e-01 2.35e-02
REACTOME METABOLISM OF POLYAMINES 12 8.10e-02 3.63e-01 0.391 0.35400 0.1640 3.36e-02 3.25e-01
REACTOME DNA STRAND ELONGATION 12 7.04e-02 3.36e-01 0.390 0.38400 0.0721 2.15e-02 6.66e-01
REACTOME PHOSPHORYLATION OF THE APC C 14 3.58e-02 2.39e-01 0.377 0.15900 -0.3410 3.03e-01 2.70e-02
REACTOME CTNNB1 PHOSPHORYLATION CASCADE 14 7.17e-02 3.37e-01 0.377 -0.28100 -0.2510 6.86e-02 1.05e-01
REACTOME COLLAGEN FORMATION 26 2.68e-03 3.95e-02 0.374 -0.10600 0.3580 3.48e-01 1.57e-03
REACTOME HS GAG DEGRADATION 10 9.05e-02 3.77e-01 0.374 -0.27300 0.2550 1.36e-01 1.62e-01
REACTOME METAL ION SLC TRANSPORTERS 12 8.20e-02 3.64e-01 0.371 0.00587 0.3710 9.72e-01 2.63e-02
REACTOME SHC1 EVENTS IN EGFR SIGNALING 14 3.84e-02 2.47e-01 0.369 0.21400 -0.3000 1.65e-01 5.18e-02
REACTOME SHC RELATED EVENTS 14 4.10e-02 2.55e-01 0.369 0.33200 -0.1610 3.17e-02 2.98e-01
REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS 13 5.17e-02 2.95e-01 0.366 -0.19100 0.3130 2.34e-01 5.11e-02
REACTOME PLATELET SENSITIZATION BY LDL 11 1.43e-01 4.58e-01 0.365 -0.25500 -0.2610 1.43e-01 1.34e-01
REACTOME CELL CELL JUNCTION ORGANIZATION 15 7.39e-02 3.37e-01 0.360 -0.20800 -0.2940 1.63e-01 4.87e-02
REACTOME APC CDC20 MEDIATED DEGRADATION OF NEK2A 17 2.42e-02 1.97e-01 0.357 0.22200 -0.2800 1.13e-01 4.58e-02
REACTOME MRNA SPLICING 98 9.57e-09 2.60e-07 0.356 0.35500 0.0247 1.31e-09 6.73e-01
REACTOME NCAM1 INTERACTIONS 16 3.93e-02 2.49e-01 0.346 -0.16200 0.3060 2.61e-01 3.42e-02
REACTOME TRAFFICKING OF AMPA RECEPTORS 16 7.03e-02 3.36e-01 0.345 -0.12400 -0.3220 3.92e-01 2.56e-02
REACTOME SIGNALLING TO P38 VIA RIT AND RIN 11 1.13e-01 4.24e-01 0.344 0.13700 -0.3160 4.33e-01 6.96e-02
REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT 21 1.74e-02 1.75e-01 0.341 0.31800 -0.1240 1.17e-02 3.27e-01
REACTOME TRANSPORT OF GLUCOSE AND OTHER SUGARS BILE SALTS AND ORGANIC ACIDS METAL IONS AND AMINE COMPOUNDS 24 1.33e-02 1.50e-01 0.341 -0.02280 0.3400 8.47e-01 3.93e-03
REACTOME INSULIN RECEPTOR RECYCLING 15 9.80e-02 3.94e-01 0.339 0.17400 0.2910 2.44e-01 5.12e-02
REACTOME GLUCONEOGENESIS 19 5.03e-02 2.90e-01 0.337 -0.12700 -0.3120 3.37e-01 1.85e-02
REACTOME APC C CDC20 MEDIATED DEGRADATION OF CYCLIN B 16 4.50e-02 2.70e-01 0.337 0.18800 -0.2790 1.92e-01 5.31e-02


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pMANOVA p.adjustMANOVA s.dist s.ctrl s.Acss2KD p.ctrl p.Acss2KD
REACTOME CITRIC ACID CYCLE TCA CYCLE 19 3.62e-09 1.04e-07 0.79900 -0.784000 0.155000 3.23e-09 2.42e-01
REACTOME PEPTIDE CHAIN ELONGATION 66 2.57e-26 3.95e-24 0.74100 0.715000 -0.196000 9.48e-24 5.89e-03
REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION 13 1.30e-05 2.87e-04 0.72200 -0.674000 0.261000 2.61e-05 1.03e-01
REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX 41 7.95e-16 3.06e-14 0.72000 0.686000 -0.217000 2.90e-14 1.64e-02
REACTOME RESPIRATORY ELECTRON TRANSPORT 59 1.07e-19 6.17e-18 0.69200 -0.691000 0.041900 4.36e-20 5.79e-01
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING 12 2.22e-04 4.47e-03 0.68700 -0.684000 -0.068700 4.14e-05 6.81e-01
REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S 48 1.86e-16 8.61e-15 0.68300 0.660000 -0.172000 2.43e-15 3.93e-02
REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION 85 2.90e-28 6.70e-26 0.68000 0.660000 -0.164000 7.31e-26 9.06e-03
REACTOME SIGNALING BY HIPPO 15 8.57e-05 1.80e-03 0.65900 -0.147000 -0.642000 3.26e-01 1.66e-05
REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS 73 4.12e-21 3.18e-19 0.64700 -0.646000 0.025400 1.29e-21 7.09e-01
REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE 88 1.08e-24 1.00e-22 0.62200 0.599000 -0.166000 2.59e-22 7.27e-03
REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX 11 1.51e-03 2.50e-02 0.59300 -0.537000 0.252000 2.04e-03 1.48e-01
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION 82 5.39e-21 3.56e-19 0.59200 0.571000 -0.159000 4.29e-19 1.30e-02
REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT 107 5.12e-26 5.91e-24 0.59100 -0.588000 0.062000 8.74e-26 2.69e-01
REACTOME TRANSLATION 123 5.64e-30 2.60e-27 0.58600 0.573000 -0.123000 6.07e-28 1.89e-02
REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS 11 4.25e-03 5.78e-02 0.54800 0.516000 -0.187000 3.07e-03 2.84e-01
REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX 84 2.90e-18 1.49e-16 0.54700 0.531000 -0.128000 3.98e-17 4.23e-02
REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE 38 1.00e-07 2.44e-06 0.51200 -0.496000 0.128000 1.25e-07 1.72e-01
REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA 11 1.93e-02 1.84e-01 0.48300 -0.015700 0.483000 9.28e-01 5.54e-03
REACTOME INFLUENZA LIFE CYCLE 113 6.91e-16 2.90e-14 0.44400 0.440000 -0.062700 7.87e-16 2.51e-01
REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS 11 6.21e-02 3.19e-01 0.43600 0.274000 0.338000 1.15e-01 5.20e-02
REACTOME TRAF6 MEDIATED NFKB ACTIVATION 13 4.65e-02 2.76e-01 0.42200 0.277000 0.318000 8.38e-02 4.74e-02
REACTOME EXTENSION OF TELOMERES 13 2.06e-02 1.86e-01 0.41800 0.348000 -0.232000 2.98e-02 1.48e-01
REACTOME PYRUVATE METABOLISM 16 9.30e-03 1.16e-01 0.41500 -0.357000 0.212000 1.34e-02 1.43e-01
REACTOME SHC1 EVENTS IN ERBB4 SIGNALING 13 2.41e-02 1.97e-01 0.41000 0.342000 -0.226000 3.29e-02 1.58e-01
REACTOME SHC MEDIATED SIGNALLING 13 2.44e-02 1.97e-01 0.40900 0.337000 -0.232000 3.57e-02 1.47e-01
REACTOME O LINKED GLYCOSYLATION OF MUCINS 10 1.16e-01 4.24e-01 0.40200 -0.320000 -0.244000 8.02e-02 1.81e-01
REACTOME INHIBITION OF THE PROTEOLYTIC ACTIVITY OF APC C REQUIRED FOR THE ONSET OF ANAPHASE BY MITOTIC SPINDLE CHECKPOINT COMPONENTS 15 2.00e-02 1.84e-01 0.39200 0.199000 -0.338000 1.82e-01 2.35e-02
REACTOME METABOLISM OF POLYAMINES 12 8.10e-02 3.63e-01 0.39100 0.354000 0.164000 3.36e-02 3.25e-01
REACTOME DNA STRAND ELONGATION 12 7.04e-02 3.36e-01 0.39000 0.384000 0.072100 2.15e-02 6.66e-01
REACTOME PHOSPHORYLATION OF THE APC C 14 3.58e-02 2.39e-01 0.37700 0.159000 -0.341000 3.03e-01 2.70e-02
REACTOME CTNNB1 PHOSPHORYLATION CASCADE 14 7.17e-02 3.37e-01 0.37700 -0.281000 -0.251000 6.86e-02 1.05e-01
REACTOME COLLAGEN FORMATION 26 2.68e-03 3.95e-02 0.37400 -0.106000 0.358000 3.48e-01 1.57e-03
REACTOME HS GAG DEGRADATION 10 9.05e-02 3.77e-01 0.37400 -0.273000 0.255000 1.36e-01 1.62e-01
REACTOME METAL ION SLC TRANSPORTERS 12 8.20e-02 3.64e-01 0.37100 0.005870 0.371000 9.72e-01 2.63e-02
REACTOME SHC1 EVENTS IN EGFR SIGNALING 14 3.84e-02 2.47e-01 0.36900 0.214000 -0.300000 1.65e-01 5.18e-02
REACTOME SHC RELATED EVENTS 14 4.10e-02 2.55e-01 0.36900 0.332000 -0.161000 3.17e-02 2.98e-01
REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS 13 5.17e-02 2.95e-01 0.36600 -0.191000 0.313000 2.34e-01 5.11e-02
REACTOME PLATELET SENSITIZATION BY LDL 11 1.43e-01 4.58e-01 0.36500 -0.255000 -0.261000 1.43e-01 1.34e-01
REACTOME CELL CELL JUNCTION ORGANIZATION 15 7.39e-02 3.37e-01 0.36000 -0.208000 -0.294000 1.63e-01 4.87e-02
REACTOME APC CDC20 MEDIATED DEGRADATION OF NEK2A 17 2.42e-02 1.97e-01 0.35700 0.222000 -0.280000 1.13e-01 4.58e-02
REACTOME MRNA SPLICING 98 9.57e-09 2.60e-07 0.35600 0.355000 0.024700 1.31e-09 6.73e-01
REACTOME NCAM1 INTERACTIONS 16 3.93e-02 2.49e-01 0.34600 -0.162000 0.306000 2.61e-01 3.42e-02
REACTOME TRAFFICKING OF AMPA RECEPTORS 16 7.03e-02 3.36e-01 0.34500 -0.124000 -0.322000 3.92e-01 2.56e-02
REACTOME SIGNALLING TO P38 VIA RIT AND RIN 11 1.13e-01 4.24e-01 0.34400 0.137000 -0.316000 4.33e-01 6.96e-02
REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT 21 1.74e-02 1.75e-01 0.34100 0.318000 -0.124000 1.17e-02 3.27e-01
REACTOME TRANSPORT OF GLUCOSE AND OTHER SUGARS BILE SALTS AND ORGANIC ACIDS METAL IONS AND AMINE COMPOUNDS 24 1.33e-02 1.50e-01 0.34100 -0.022800 0.340000 8.47e-01 3.93e-03
REACTOME INSULIN RECEPTOR RECYCLING 15 9.80e-02 3.94e-01 0.33900 0.174000 0.291000 2.44e-01 5.12e-02
REACTOME GLUCONEOGENESIS 19 5.03e-02 2.90e-01 0.33700 -0.127000 -0.312000 3.37e-01 1.85e-02
REACTOME APC C CDC20 MEDIATED DEGRADATION OF CYCLIN B 16 4.50e-02 2.70e-01 0.33700 0.188000 -0.279000 1.92e-01 5.31e-02
REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM 16 9.00e-02 3.77e-01 0.33600 -0.267000 -0.204000 6.46e-02 1.57e-01
REACTOME HEPARAN SULFATE HEPARIN HS GAG METABOLISM 24 1.05e-02 1.28e-01 0.33600 -0.297000 0.155000 1.17e-02 1.88e-01
REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE 15 5.75e-02 3.12e-01 0.33300 0.215000 -0.254000 1.50e-01 8.85e-02
REACTOME PURINE SALVAGE 10 2.31e-01 5.88e-01 0.33200 -0.205000 -0.261000 2.63e-01 1.53e-01
REACTOME CYTOSOLIC TRNA AMINOACYLATION 22 3.03e-02 2.33e-01 0.32900 0.326000 0.048100 8.18e-03 6.96e-01
REACTOME MRNA 3 END PROCESSING 30 1.37e-02 1.50e-01 0.32800 0.260000 0.201000 1.39e-02 5.75e-02
REACTOME MITOCHONDRIAL PROTEIN IMPORT 42 1.25e-03 2.14e-02 0.32400 -0.324000 0.001300 2.90e-04 9.88e-01
REACTOME MRNA SPLICING MINOR PATHWAY 38 1.88e-03 2.99e-02 0.32300 0.319000 -0.050900 6.70e-04 5.88e-01
REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY 11 1.52e-01 4.65e-01 0.31900 0.283000 -0.147000 1.04e-01 4.00e-01
REACTOME STRIATED MUSCLE CONTRACTION 22 3.33e-02 2.39e-01 0.31500 -0.032100 0.313000 7.95e-01 1.11e-02
REACTOME HS GAG BIOSYNTHESIS 15 1.09e-01 4.24e-01 0.31400 -0.313000 -0.018100 3.57e-02 9.03e-01
REACTOME TELOMERE MAINTENANCE 17 5.85e-02 3.12e-01 0.31200 0.236000 -0.204000 9.24e-02 1.46e-01
REACTOME SOS MEDIATED SIGNALLING 13 1.20e-01 4.24e-01 0.31100 0.151000 -0.272000 3.46e-01 9.00e-02
REACTOME INTERFERON GAMMA SIGNALING 21 3.38e-02 2.39e-01 0.31000 0.142000 -0.275000 2.61e-01 2.92e-02
REACTOME IRON UPTAKE AND TRANSPORT 23 5.38e-02 3.03e-01 0.30700 0.154000 0.265000 2.01e-01 2.77e-02
REACTOME MYOGENESIS 21 7.22e-02 3.37e-01 0.30600 -0.250000 -0.176000 4.74e-02 1.62e-01
REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA 124 6.82e-08 1.75e-06 0.30500 0.299000 0.060500 1.01e-08 2.46e-01
REACTOME BOTULINUM NEUROTOXICITY 10 2.24e-01 5.74e-01 0.30200 -0.097900 0.285000 5.92e-01 1.18e-01
REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS 10 2.24e-01 5.74e-01 0.30200 -0.097900 0.285000 5.92e-01 1.18e-01
REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS 17 1.31e-01 4.41e-01 0.30000 0.177000 0.242000 2.06e-01 8.48e-02
REACTOME GRB2 EVENTS IN ERBB2 SIGNALING 14 1.17e-01 4.24e-01 0.29900 0.240000 -0.178000 1.20e-01 2.48e-01
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS 16 1.05e-01 4.19e-01 0.29800 -0.294000 0.048100 4.19e-02 7.39e-01
REACTOME CELL JUNCTION ORGANIZATION 30 2.60e-02 2.07e-01 0.29600 -0.276000 -0.109000 9.04e-03 3.04e-01
REACTOME INTEGRIN CELL SURFACE INTERACTIONS 41 2.73e-03 3.95e-02 0.29600 -0.280000 0.097400 1.97e-03 2.81e-01
REACTOME METABOLISM OF MRNA 176 3.79e-11 1.25e-09 0.29200 0.280000 -0.080000 1.67e-10 6.87e-02
REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN 22 8.64e-02 3.73e-01 0.29000 -0.213000 -0.196000 8.35e-02 1.11e-01
REACTOME EXTRACELLULAR MATRIX ORGANIZATION 31 1.36e-02 1.50e-01 0.28700 -0.132000 0.255000 2.04e-01 1.41e-02
REACTOME MTORC1 MEDIATED SIGNALLING 11 2.82e-01 6.52e-01 0.28600 0.272000 0.086500 1.18e-01 6.19e-01
REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS 12 2.60e-01 6.22e-01 0.28600 -0.261000 -0.116000 1.17e-01 4.88e-01
REACTOME RNA POL III CHAIN ELONGATION 16 1.10e-01 4.24e-01 0.28500 0.146000 -0.245000 3.13e-01 8.99e-02
REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS 12 2.07e-01 5.56e-01 0.28400 -0.275000 0.073900 9.97e-02 6.58e-01
REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM 48 5.94e-03 7.75e-02 0.28400 0.209000 0.193000 1.24e-02 2.11e-02
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS 16 1.17e-01 4.24e-01 0.28400 0.261000 -0.112000 7.13e-02 4.39e-01
REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC 13 1.88e-01 5.38e-01 0.28200 0.274000 -0.066900 8.69e-02 6.76e-01
REACTOME CHONDROITIN SULFATE DERMATAN SULFATE METABOLISM 21 6.88e-02 3.34e-01 0.28000 -0.080800 0.268000 5.22e-01 3.39e-02
REACTOME BASE EXCISION REPAIR 11 2.62e-01 6.23e-01 0.27900 0.278000 -0.028900 1.11e-01 8.68e-01
REACTOME GLUCOSE TRANSPORT 29 4.14e-02 2.55e-01 0.27800 0.074200 0.268000 4.89e-01 1.25e-02
REACTOME ACTIVATION OF BH3 ONLY PROTEINS 11 3.04e-01 6.82e-01 0.27800 -0.088300 -0.263000 6.12e-01 1.31e-01
REACTOME ION CHANNEL TRANSPORT 18 9.50e-02 3.88e-01 0.27600 -0.167000 0.220000 2.20e-01 1.06e-01
REACTOME LIPOPROTEIN METABOLISM 11 3.30e-01 7.12e-01 0.27500 -0.226000 -0.156000 1.95e-01 3.69e-01
REACTOME MRNA PROCESSING 137 7.01e-07 1.62e-05 0.26900 0.264000 0.051000 1.08e-07 3.05e-01
REACTOME SIGNALLING TO RAS 20 8.58e-02 3.73e-01 0.26700 0.207000 -0.169000 1.09e-01 1.91e-01
REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT 16 1.93e-01 5.43e-01 0.26700 -0.261000 -0.058400 7.08e-02 6.86e-01
REACTOME CTLA4 INHIBITORY SIGNALING 15 2.35e-01 5.88e-01 0.26700 -0.231000 -0.133000 1.21e-01 3.72e-01
REACTOME RNA POL III TRANSCRIPTION TERMINATION 18 1.20e-01 4.24e-01 0.26700 0.093900 -0.250000 4.91e-01 6.67e-02
REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC 14 2.17e-01 5.68e-01 0.26600 0.266000 -0.009110 8.48e-02 9.53e-01
REACTOME CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION 35 3.57e-02 2.39e-01 0.26500 0.231000 0.130000 1.80e-02 1.83e-01
REACTOME SEMA3A PAK DEPENDENT AXON REPULSION 10 4.04e-01 7.55e-01 0.26000 -0.220000 -0.137000 2.28e-01 4.52e-01
REACTOME METABOLISM OF RNA 215 1.96e-10 6.03e-09 0.25700 0.252000 -0.053000 2.56e-10 1.83e-01
REACTOME CHROMOSOME MAINTENANCE 34 2.21e-02 1.96e-01 0.25600 0.193000 -0.168000 5.16e-02 9.12e-02
REACTOME MITOCHONDRIAL TRNA AMINOACYLATION 20 1.38e-01 4.55e-01 0.25300 0.014000 -0.253000 9.14e-01 5.04e-02
REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE 18 1.37e-01 4.55e-01 0.25300 -0.185000 0.173000 1.75e-01 2.04e-01
REACTOME NRAGE SIGNALS DEATH THROUGH JNK 27 6.04e-02 3.14e-01 0.25100 -0.235000 0.087500 3.45e-02 4.32e-01
REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER 25 6.73e-02 3.31e-01 0.25100 0.194000 -0.159000 9.34e-02 1.69e-01
REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC 19 1.40e-01 4.57e-01 0.24900 0.226000 -0.103000 8.79e-02 4.37e-01
REACTOME BASIGIN INTERACTIONS 13 3.51e-01 7.15e-01 0.24600 0.155000 0.192000 3.34e-01 2.32e-01
REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS 20 2.04e-01 5.56e-01 0.24500 -0.162000 -0.184000 2.10e-01 1.55e-01
REACTOME G2 M CHECKPOINTS 17 1.85e-01 5.37e-01 0.24400 0.221000 -0.103000 1.15e-01 4.62e-01
REACTOME RIG I MDA5 MEDIATED INDUCTION OF IFN ALPHA BETA PATHWAYS 36 5.59e-02 3.11e-01 0.24300 0.214000 0.114000 2.61e-02 2.35e-01
REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS 43 2.32e-02 1.97e-01 0.24100 0.241000 0.010800 6.27e-03 9.03e-01
REACTOME DCC MEDIATED ATTRACTIVE SIGNALING 10 3.76e-01 7.33e-01 0.24100 -0.116000 0.211000 5.26e-01 2.49e-01
REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER 21 1.25e-01 4.31e-01 0.24000 0.158000 -0.180000 2.09e-01 1.53e-01
REACTOME METABOLISM OF PROTEINS 300 9.95e-13 3.54e-11 0.23900 0.223000 -0.086000 4.21e-11 1.12e-02
REACTOME IL RECEPTOR SHC SIGNALING 15 2.79e-01 6.49e-01 0.23900 0.238000 0.022900 1.10e-01 8.78e-01
REACTOME GPCR LIGAND BINDING 38 4.83e-02 2.82e-01 0.23900 -0.226000 -0.076900 1.60e-02 4.13e-01
REACTOME INTRINSIC PATHWAY FOR APOPTOSIS 17 2.68e-01 6.32e-01 0.23800 -0.109000 -0.212000 4.37e-01 1.30e-01
REACTOME GLOBAL GENOMIC NER GG NER 23 1.50e-01 4.63e-01 0.23800 0.234000 0.040300 5.17e-02 7.38e-01
REACTOME ION TRANSPORT BY P TYPE ATPASES 17 2.04e-01 5.56e-01 0.23500 -0.121000 0.201000 3.86e-01 1.52e-01
REACTOME PHASE II CONJUGATION 24 1.76e-01 5.22e-01 0.23400 0.163000 0.168000 1.68e-01 1.55e-01
REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS 21 1.44e-01 4.58e-01 0.23200 -0.154000 0.174000 2.23e-01 1.69e-01
REACTOME SULFUR AMINO ACID METABOLISM 18 2.40e-01 5.94e-01 0.23100 0.230000 0.024500 9.14e-02 8.57e-01
REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR 10 4.95e-01 8.14e-01 0.23000 -0.173000 -0.151000 3.43e-01 4.07e-01
REACTOME IL 2 SIGNALING 25 1.16e-01 4.24e-01 0.22800 0.213000 -0.083000 6.61e-02 4.73e-01
REACTOME MEMBRANE TRAFFICKING 92 6.79e-04 1.25e-02 0.22700 0.226000 -0.017300 1.84e-04 7.75e-01
REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES 12 3.91e-01 7.47e-01 0.22600 -0.008380 0.226000 9.60e-01 1.76e-01
REACTOME P38MAPK EVENTS 10 5.11e-01 8.18e-01 0.22400 -0.135000 -0.179000 4.60e-01 3.27e-01
REACTOME PROTEIN FOLDING 40 3.48e-02 2.39e-01 0.22400 0.200000 -0.099500 2.85e-02 2.77e-01
REACTOME PI3K EVENTS IN ERBB4 SIGNALING 28 1.47e-01 4.58e-01 0.22300 0.091500 0.204000 4.03e-01 6.22e-02
REACTOME TIE2 SIGNALING 13 3.68e-01 7.20e-01 0.22300 -0.223000 0.012200 1.64e-01 9.39e-01
REACTOME FATTY ACYL COA BIOSYNTHESIS 11 4.79e-01 8.02e-01 0.22200 -0.105000 -0.195000 5.46e-01 2.62e-01
REACTOME GPVI MEDIATED ACTIVATION CASCADE 16 2.94e-01 6.67e-01 0.22100 -0.021800 0.220000 8.80e-01 1.28e-01
REACTOME SIGNALING BY NOTCH3 10 5.10e-01 8.18e-01 0.22100 -0.090400 -0.202000 6.21e-01 2.69e-01
REACTOME TRANSPORT TO THE GOLGI AND SUBSEQUENT MODIFICATION 22 2.09e-01 5.56e-01 0.22000 0.218000 0.031400 7.68e-02 7.99e-01
REACTOME TAK1 ACTIVATES NFKB BY PHOSPHORYLATION AND ACTIVATION OF IKKS COMPLEX 15 3.85e-01 7.44e-01 0.21600 0.192000 0.099000 1.98e-01 5.07e-01
REACTOME SIGNALING BY ROBO RECEPTOR 19 3.01e-01 6.79e-01 0.21600 -0.105000 -0.189000 4.28e-01 1.55e-01
REACTOME ACTIVATION OF KAINATE RECEPTORS UPON GLUTAMATE BINDING 10 4.77e-01 8.02e-01 0.21600 0.037500 -0.212000 8.37e-01 2.45e-01
REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN 23 2.04e-01 5.56e-01 0.21600 0.018500 0.215000 8.78e-01 7.47e-02
REACTOME RECYCLING PATHWAY OF L1 19 2.85e-01 6.56e-01 0.21400 0.044500 0.209000 7.37e-01 1.14e-01
REACTOME MUSCLE CONTRACTION 36 9.50e-02 3.88e-01 0.21300 0.047100 0.208000 6.25e-01 3.08e-02
REACTOME GLYCOSPHINGOLIPID METABOLISM 20 2.71e-01 6.32e-01 0.21200 -0.033100 -0.209000 7.98e-01 1.06e-01
REACTOME PLATELET HOMEOSTASIS 32 1.47e-01 4.58e-01 0.21100 -0.114000 -0.178000 2.64e-01 8.18e-02
REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL 11 4.45e-01 7.87e-01 0.20700 -0.123000 0.167000 4.79e-01 3.38e-01
REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS 15 3.31e-01 7.12e-01 0.20700 0.131000 -0.161000 3.80e-01 2.82e-01
REACTOME VIRAL MESSENGER RNA SYNTHESIS 14 3.57e-01 7.15e-01 0.20700 0.134000 -0.158000 3.87e-01 3.07e-01
REACTOME CELL CELL COMMUNICATION 54 3.47e-02 2.39e-01 0.20600 -0.204000 -0.028900 9.52e-03 7.14e-01
REACTOME NRIF SIGNALS CELL DEATH FROM THE NUCLEUS 11 5.41e-01 8.33e-01 0.20500 0.134000 0.155000 4.40e-01 3.74e-01
REACTOME COSTIMULATION BY THE CD28 FAMILY 33 1.59e-01 4.82e-01 0.20500 -0.162000 -0.125000 1.07e-01 2.15e-01
REACTOME SEMAPHORIN INTERACTIONS 42 7.44e-02 3.37e-01 0.20500 -0.203000 -0.020900 2.27e-02 8.15e-01
REACTOME GLYCOSAMINOGLYCAN METABOLISM 47 3.50e-02 2.39e-01 0.20400 -0.157000 0.130000 6.26e-02 1.23e-01
REACTOME TCR SIGNALING 28 2.09e-01 5.56e-01 0.20300 -0.178000 -0.097500 1.03e-01 3.72e-01
REACTOME NEPHRIN INTERACTIONS 15 3.58e-01 7.15e-01 0.20300 -0.078000 0.187000 6.01e-01 2.09e-01
REACTOME GLYCOLYSIS 19 2.66e-01 6.30e-01 0.20300 0.103000 -0.175000 4.39e-01 1.87e-01
REACTOME APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINS 57 1.93e-02 1.84e-01 0.20100 0.149000 -0.135000 5.22e-02 7.84e-02
REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION 10 5.34e-01 8.33e-01 0.20100 0.015300 -0.200000 9.33e-01 2.73e-01
REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN 18 2.94e-01 6.67e-01 0.20100 -0.097700 0.175000 4.73e-01 1.99e-01
REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT 22 3.14e-01 6.83e-01 0.19900 -0.122000 -0.157000 3.21e-01 2.02e-01
REACTOME G ALPHA1213 SIGNALLING EVENTS 42 6.03e-02 3.14e-01 0.19800 -0.162000 0.114000 6.98e-02 2.01e-01
REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING 17 4.00e-01 7.55e-01 0.19700 0.069200 0.184000 6.22e-01 1.89e-01
REACTOME RNA POL III TRANSCRIPTION 31 1.29e-01 4.40e-01 0.19600 0.138000 -0.139000 1.83e-01 1.80e-01
REACTOME TRANS GOLGI NETWORK VESICLE BUDDING 49 5.73e-02 3.12e-01 0.19500 0.195000 -0.006270 1.83e-02 9.40e-01
REACTOME ACTIVATION OF NF KAPPAB IN B CELLS 54 4.38e-02 2.66e-01 0.19500 0.195000 -0.002040 1.32e-02 9.79e-01
REACTOME PERK REGULATED GENE EXPRESSION 22 2.71e-01 6.32e-01 0.19500 -0.020100 0.194000 8.71e-01 1.16e-01
REACTOME REGULATION OF MITOTIC CELL CYCLE 61 1.95e-02 1.84e-01 0.19500 0.161000 -0.110000 3.01e-02 1.38e-01
REACTOME AUTODEGRADATION OF CDH1 BY CDH1 APC C 54 3.22e-02 2.39e-01 0.19300 0.142000 -0.130000 7.06e-02 9.95e-02
REACTOME ACTIVATION OF GENES BY ATF4 19 3.40e-01 7.15e-01 0.19200 -0.011400 0.191000 9.32e-01 1.49e-01
REACTOME CHOLESTEROL BIOSYNTHESIS 12 5.29e-01 8.32e-01 0.19100 -0.034300 -0.188000 8.37e-01 2.60e-01
REACTOME PEPTIDE LIGAND BINDING RECEPTORS 11 5.12e-01 8.18e-01 0.19100 -0.173000 0.080600 3.21e-01 6.43e-01
REACTOME NUCLEAR SIGNALING BY ERBB4 21 3.56e-01 7.15e-01 0.18900 0.172000 0.080100 1.73e-01 5.26e-01
REACTOME DESTABILIZATION OF MRNA BY TRISTETRAPROLIN TTP 16 4.56e-01 7.89e-01 0.18900 0.077700 0.172000 5.91e-01 2.33e-01
REACTOME GPCR DOWNSTREAM SIGNALING 103 2.19e-03 3.38e-02 0.18700 -0.144000 0.119000 1.20e-02 3.69e-02
REACTOME DARPP 32 EVENTS 17 3.61e-01 7.15e-01 0.18700 0.133000 -0.131000 3.41e-01 3.52e-01
REACTOME DNA REPAIR 65 3.62e-02 2.39e-01 0.18600 0.185000 0.022300 9.98e-03 7.57e-01
REACTOME PRE NOTCH PROCESSING IN GOLGI 14 4.37e-01 7.80e-01 0.18600 -0.142000 0.119000 3.57e-01 4.39e-01
REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY 18 4.03e-01 7.55e-01 0.18500 0.025700 0.184000 8.51e-01 1.78e-01
REACTOME FRS2 MEDIATED CASCADE 16 3.90e-01 7.47e-01 0.18500 0.143000 -0.118000 3.23e-01 4.14e-01
REACTOME NETRIN1 SIGNALING 21 3.44e-01 7.15e-01 0.18300 -0.183000 -0.005220 1.46e-01 9.67e-01
REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1 57 3.79e-02 2.46e-01 0.18300 0.122000 -0.137000 1.12e-01 7.48e-02
REACTOME TRNA AMINOACYLATION 39 1.13e-01 4.24e-01 0.18300 0.166000 -0.077300 7.34e-02 4.04e-01
REACTOME CELL CYCLE CHECKPOINTS 78 1.20e-02 1.42e-01 0.18300 0.150000 -0.105000 2.26e-02 1.10e-01
REACTOME DEADENYLATION OF MRNA 16 4.00e-01 7.55e-01 0.18300 0.134000 -0.124000 3.53e-01 3.92e-01
REACTOME CD28 DEPENDENT PI3K AKT SIGNALING 15 4.47e-01 7.87e-01 0.18200 -0.050900 0.174000 7.33e-01 2.43e-01
REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM 127 1.10e-03 1.95e-02 0.17900 -0.150000 0.097500 3.75e-03 5.87e-02
REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION 18 3.79e-01 7.37e-01 0.17800 -0.156000 0.087400 2.53e-01 5.21e-01
REACTOME BIOLOGICAL OXIDATIONS 39 1.85e-01 5.37e-01 0.17800 0.077100 0.161000 4.05e-01 8.31e-02
REACTOME INWARDLY RECTIFYING K CHANNELS 10 6.54e-01 9.06e-01 0.17800 -0.096500 -0.149000 5.97e-01 4.14e-01
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT 19 3.61e-01 7.15e-01 0.17800 0.092500 -0.152000 4.86e-01 2.52e-01
REACTOME SIGNALING BY RHO GTPASES 62 7.33e-02 3.37e-01 0.17700 -0.156000 -0.083200 3.42e-02 2.58e-01
REACTOME SIGNALING BY BMP 17 4.05e-01 7.55e-01 0.17600 -0.141000 0.106000 3.16e-01 4.50e-01
REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL 43 1.06e-01 4.20e-01 0.17600 -0.152000 0.088800 8.60e-02 3.14e-01
REACTOME PPARA ACTIVATES GENE EXPRESSION 81 1.51e-02 1.62e-01 0.17400 -0.120000 0.126000 6.32e-02 4.98e-02
REACTOME E2F MEDIATED REGULATION OF DNA REPLICATION 16 4.37e-01 7.80e-01 0.17400 0.099800 -0.143000 4.90e-01 3.24e-01
REACTOME SIGNALING BY NOTCH2 10 6.61e-01 9.06e-01 0.17400 -0.075400 -0.157000 6.80e-01 3.91e-01
REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING 19 4.68e-01 7.98e-01 0.17300 0.139000 0.104000 2.96e-01 4.34e-01
REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS 22 3.60e-01 7.15e-01 0.17300 0.172000 -0.015300 1.63e-01 9.01e-01
REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK 10 5.99e-01 8.73e-01 0.17300 -0.125000 0.119000 4.93e-01 5.16e-01
REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS 24 3.64e-01 7.15e-01 0.17200 0.045800 0.166000 6.98e-01 1.59e-01
REACTOME SIGNAL ATTENUATION 10 6.75e-01 9.06e-01 0.17200 0.121000 0.123000 5.08e-01 5.02e-01
REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA 13 5.33e-01 8.33e-01 0.16900 -0.150000 0.079500 3.50e-01 6.20e-01
REACTOME TRANSCRIPTION 124 6.04e-03 7.75e-02 0.16900 0.167000 0.030100 1.41e-03 5.65e-01
REACTOME INTERFERON ALPHA BETA SIGNALING 14 5.72e-01 8.47e-01 0.16900 -0.054100 -0.160000 7.26e-01 3.01e-01
REACTOME ER PHAGOSOME PATHWAY 49 9.79e-02 3.94e-01 0.16900 0.152000 -0.072300 6.57e-02 3.82e-01
REACTOME ADP SIGNALLING THROUGH P2RY1 11 6.50e-01 9.06e-01 0.16700 -0.158000 -0.054800 3.65e-01 7.53e-01
REACTOME SCF BETA TRCP MEDIATED DEGRADATION OF EMI1 43 1.43e-01 4.58e-01 0.16700 0.160000 -0.047000 6.98e-02 5.95e-01
REACTOME MEIOTIC SYNAPSIS 15 5.28e-01 8.32e-01 0.16500 0.164000 -0.015100 2.70e-01 9.19e-01
REACTOME G PROTEIN ACTIVATION 10 6.54e-01 9.06e-01 0.16500 0.016300 -0.164000 9.29e-01 3.69e-01
REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION 28 3.62e-01 7.15e-01 0.16400 0.088900 0.138000 4.16e-01 2.06e-01
REACTOME POTASSIUM CHANNELS 22 4.52e-01 7.87e-01 0.16400 -0.137000 -0.090400 2.66e-01 4.63e-01
REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC 44 1.40e-01 4.57e-01 0.16400 0.150000 -0.065800 8.56e-02 4.51e-01
REACTOME RNA POL I TRANSCRIPTION 26 3.31e-01 7.12e-01 0.16300 0.160000 -0.032500 1.59e-01 7.74e-01
REACTOME NEF MEDIATES DOWN MODULATION OF CELL SURFACE RECEPTORS BY RECRUITING THEM TO CLATHRIN ADAPTERS 14 5.89e-01 8.63e-01 0.16200 -0.032700 -0.158000 8.33e-01 3.05e-01
REACTOME SYNTHESIS OF DNA 61 8.73e-02 3.73e-01 0.16000 0.160000 -0.016200 3.15e-02 8.28e-01
REACTOME RNA POL I TRANSCRIPTION TERMINATION 19 4.59e-01 7.89e-01 0.16000 0.157000 -0.031700 2.37e-01 8.11e-01
REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS 15 5.28e-01 8.32e-01 0.16000 -0.060100 0.148000 6.87e-01 3.20e-01
REACTOME ENERGY DEPENDENT REGULATION OF MTOR BY LKB1 AMPK 17 4.84e-01 8.06e-01 0.16000 -0.064900 0.146000 6.44e-01 2.97e-01
REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS 11 6.65e-01 9.06e-01 0.15800 -0.018500 -0.157000 9.15e-01 3.66e-01
REACTOME INTERACTIONS OF VPR WITH HOST CELLULAR PROTEINS 28 3.64e-01 7.15e-01 0.15800 0.032100 0.155000 7.69e-01 1.56e-01
REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE 11 6.71e-01 9.06e-01 0.15700 0.023900 0.156000 8.91e-01 3.72e-01
REACTOME NUCLEOTIDE EXCISION REPAIR 38 2.35e-01 5.88e-01 0.15700 0.157000 -0.008420 9.44e-02 9.28e-01
REACTOME TRIF MEDIATED TLR3 SIGNALING 51 1.93e-01 5.43e-01 0.15600 0.113000 0.108000 1.64e-01 1.82e-01
REACTOME PKB MEDIATED EVENTS 27 4.18e-01 7.65e-01 0.15600 0.095800 0.123000 3.89e-01 2.69e-01
REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT 95 3.42e-02 2.39e-01 0.15600 0.019300 0.155000 7.45e-01 9.38e-03
REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE 14 5.61e-01 8.47e-01 0.15600 0.082900 -0.132000 5.92e-01 3.93e-01
REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE 18 4.90e-01 8.11e-01 0.15600 -0.046800 0.149000 7.31e-01 2.76e-01
REACTOME UNFOLDED PROTEIN RESPONSE 64 8.39e-02 3.69e-01 0.15600 -0.034100 0.152000 6.38e-01 3.60e-02
REACTOME SHC MEDIATED CASCADE 10 6.75e-01 9.06e-01 0.15500 0.041700 -0.150000 8.19e-01 4.13e-01
REACTOME VOLTAGE GATED POTASSIUM CHANNELS 11 6.63e-01 9.06e-01 0.15400 -0.153000 0.016400 3.78e-01 9.25e-01
REACTOME PI 3K CASCADE 34 3.08e-01 6.83e-01 0.15300 0.018600 0.152000 8.51e-01 1.25e-01
REACTOME PYRIMIDINE METABOLISM 10 7.29e-01 9.29e-01 0.15300 -0.081800 -0.130000 6.54e-01 4.78e-01
REACTOME CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6 41 2.04e-01 5.56e-01 0.15300 0.141000 -0.059000 1.18e-01 5.14e-01
REACTOME MEIOSIS 25 3.92e-01 7.47e-01 0.15200 0.148000 -0.036500 2.00e-01 7.52e-01
REACTOME PI3K EVENTS IN ERBB2 SIGNALING 32 3.56e-01 7.15e-01 0.15200 0.053400 0.143000 6.01e-01 1.63e-01
REACTOME PIP3 ACTIVATES AKT SIGNALING 25 4.51e-01 7.87e-01 0.15200 0.062300 0.139000 5.90e-01 2.30e-01
REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY 24 4.51e-01 7.87e-01 0.15200 0.034100 0.148000 7.73e-01 2.10e-01
REACTOME RNA POL I RNA POL III AND MITOCHONDRIAL TRANSCRIPTION 56 1.17e-01 4.24e-01 0.15200 0.138000 -0.061900 7.36e-02 4.24e-01
REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE 10 6.74e-01 9.06e-01 0.15100 0.099700 -0.114000 5.85e-01 5.32e-01
REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION 13 6.73e-01 9.06e-01 0.15100 0.119000 0.093800 4.59e-01 5.58e-01
REACTOME DOUBLE STRAND BREAK REPAIR 12 6.86e-01 9.07e-01 0.15100 0.138000 0.060600 4.07e-01 7.16e-01
REACTOME REGULATION OF APOPTOSIS 49 1.91e-01 5.43e-01 0.15000 0.150000 0.008900 6.95e-02 9.14e-01
REACTOME GLUCOSE METABOLISM 44 2.07e-01 5.56e-01 0.15000 0.030000 -0.147000 7.31e-01 9.25e-02
REACTOME APOPTOTIC EXECUTION PHASE 27 3.58e-01 7.15e-01 0.14900 -0.105000 0.106000 3.46e-01 3.43e-01
REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX 10 6.86e-01 9.07e-01 0.14900 0.125000 -0.080100 4.93e-01 6.61e-01
REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G 43 2.12e-01 5.56e-01 0.14800 0.138000 -0.052800 1.18e-01 5.50e-01
REACTOME MRNA CAPPING 28 4.03e-01 7.55e-01 0.14800 -0.012200 -0.147000 9.11e-01 1.78e-01
REACTOME L1CAM INTERACTIONS 51 1.86e-01 5.37e-01 0.14700 -0.004370 0.147000 9.57e-01 7.01e-02
REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE 22 4.51e-01 7.87e-01 0.14600 -0.128000 0.070300 2.97e-01 5.68e-01
REACTOME RAP1 SIGNALLING 12 6.51e-01 9.06e-01 0.14600 -0.062400 0.132000 7.08e-01 4.28e-01
REACTOME SPHINGOLIPID METABOLISM 35 3.43e-01 7.15e-01 0.14600 -0.031000 -0.143000 7.51e-01 1.45e-01
REACTOME MAPK TARGETS NUCLEAR EVENTS MEDIATED BY MAP KINASES 25 4.16e-01 7.65e-01 0.14600 -0.054400 0.135000 6.38e-01 2.43e-01
REACTOME IL1 SIGNALING 23 4.36e-01 7.80e-01 0.14500 0.102000 -0.103000 3.99e-01 3.91e-01
REACTOME NFKB AND MAP KINASES ACTIVATION MEDIATED BY TLR4 SIGNALING REPERTOIRE 49 2.57e-01 6.22e-01 0.14500 0.108000 0.096700 1.93e-01 2.42e-01
REACTOME PROCESSING OF INTRONLESS PRE MRNAS 12 6.79e-01 9.06e-01 0.14400 -0.143000 0.012900 3.90e-01 9.38e-01
REACTOME CELL CYCLE 211 6.47e-04 1.25e-02 0.14400 0.106000 -0.096900 8.27e-03 1.60e-02
REACTOME PEROXISOMAL LIPID METABOLISM 16 5.69e-01 8.47e-01 0.14300 -0.086800 0.114000 5.48e-01 4.30e-01
REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES 51 2.51e-01 6.14e-01 0.14300 0.108000 0.093700 1.82e-01 2.48e-01
REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1 43 2.34e-01 5.88e-01 0.14300 0.134000 -0.050500 1.29e-01 5.67e-01
REACTOME ANTIGEN PROCESSING CROSS PRESENTATION 57 1.46e-01 4.58e-01 0.14200 0.126000 -0.065900 1.02e-01 3.90e-01
REACTOME TRANSCRIPTION COUPLED NER TC NER 35 3.35e-01 7.15e-01 0.14100 0.141000 -0.015600 1.51e-01 8.73e-01
REACTOME MEIOTIC RECOMBINATION 10 7.15e-01 9.25e-01 0.14100 0.123000 -0.068600 5.01e-01 7.07e-01
REACTOME RNA POL I TRANSCRIPTION INITIATION 23 4.66e-01 7.97e-01 0.14100 0.126000 -0.062200 2.95e-01 6.06e-01
REACTOME MITOTIC G1 G1 S PHASES 84 6.37e-02 3.23e-01 0.14000 0.125000 -0.063900 4.89e-02 3.13e-01
REACTOME SIGNALING BY ERBB4 66 1.74e-01 5.18e-01 0.13900 0.129000 0.051400 7.10e-02 4.71e-01
REACTOME ELONGATION ARREST AND RECOVERY 24 4.58e-01 7.89e-01 0.13900 0.119000 -0.070600 3.12e-01 5.50e-01
REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS 17 5.72e-01 8.47e-01 0.13900 0.080300 -0.113000 5.67e-01 4.20e-01
REACTOME RNA POL II TRANSCRIPTION 83 1.11e-01 4.24e-01 0.13800 0.131000 0.044000 4.01e-02 4.90e-01
REACTOME ASSEMBLY OF THE PRE REPLICATIVE COMPLEX 49 2.10e-01 5.56e-01 0.13800 0.121000 -0.065900 1.44e-01 4.26e-01
REACTOME HOST INTERACTIONS OF HIV FACTORS 98 5.88e-02 3.12e-01 0.13700 0.136000 -0.014600 2.06e-02 8.03e-01
REACTOME S PHASE 71 1.20e-01 4.24e-01 0.13600 0.131000 -0.035900 5.65e-02 6.02e-01
REACTOME P53 INDEPENDENT G1 S DNA DAMAGE CHECKPOINT 43 2.59e-01 6.22e-01 0.13600 0.113000 -0.075300 2.00e-01 3.94e-01
REACTOME M G1 TRANSITION 52 2.02e-01 5.56e-01 0.13600 0.123000 -0.057200 1.25e-01 4.76e-01
REACTOME MICRORNA MIRNA BIOGENESIS 18 5.72e-01 8.47e-01 0.13600 0.121000 -0.062500 3.76e-01 6.46e-01
REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX 46 2.37e-01 5.89e-01 0.13600 0.112000 -0.077000 1.91e-01 3.67e-01
REACTOME G1 S TRANSITION 69 1.31e-01 4.41e-01 0.13500 0.131000 -0.035000 6.12e-02 6.16e-01
REACTOME SMOOTH MUSCLE CONTRACTION 18 6.45e-01 9.06e-01 0.13500 0.111000 0.076500 4.15e-01 5.74e-01
REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS 20 5.41e-01 8.33e-01 0.13500 0.117000 -0.067300 3.67e-01 6.02e-01
REACTOME CELL CYCLE MITOTIC 187 3.61e-03 5.06e-02 0.13400 0.110000 -0.076700 1.01e-02 7.22e-02
REACTOME FORMATION OF INCISION COMPLEX IN GG NER 17 6.60e-01 9.06e-01 0.13400 0.120000 0.060100 3.94e-01 6.68e-01
REACTOME PI3K CASCADE 45 3.06e-01 6.83e-01 0.13300 0.012200 0.133000 8.88e-01 1.24e-01
REACTOME ORC1 REMOVAL FROM CHROMATIN 51 2.33e-01 5.88e-01 0.13300 0.128000 -0.035100 1.14e-01 6.65e-01
REACTOME TRAF6 MEDIATED IRF7 ACTIVATION 12 7.59e-01 9.43e-01 0.13100 0.105000 0.078700 5.29e-01 6.37e-01
REACTOME IL 3 5 AND GM CSF SIGNALING 24 5.04e-01 8.18e-01 0.13100 0.121000 -0.050500 3.05e-01 6.69e-01
REACTOME ARMS MEDIATED ACTIVATION 14 7.23e-01 9.25e-01 0.13100 -0.063300 -0.114000 6.82e-01 4.59e-01
REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR 17 6.79e-01 9.06e-01 0.13000 -0.071000 -0.109000 6.13e-01 4.36e-01
REACTOME NOD1 2 SIGNALING PATHWAY 17 6.17e-01 8.91e-01 0.12800 0.092000 -0.089600 5.12e-01 5.23e-01
REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL 51 3.12e-01 6.83e-01 0.12800 -0.040600 -0.121000 6.17e-01 1.35e-01
REACTOME G ALPHA Q SIGNALLING EVENTS 40 3.39e-01 7.15e-01 0.12700 -0.113000 0.057900 2.17e-01 5.27e-01
REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION 10 7.87e-01 9.44e-01 0.12600 -0.126000 -0.007520 4.90e-01 9.67e-01
REACTOME SIGNALING BY SCF KIT 56 2.94e-01 6.67e-01 0.12600 0.116000 0.050500 1.35e-01 5.14e-01
REACTOME SIGNALING BY THE B CELL RECEPTOR BCR 97 8.80e-02 3.73e-01 0.12600 0.124000 -0.023500 3.59e-02 6.91e-01
REACTOME TRANSMEMBRANE TRANSPORT OF SMALL MOLECULES 171 1.65e-02 1.73e-01 0.12600 -0.005850 0.126000 8.96e-01 4.78e-03
REACTOME GLUCAGON SIGNALING IN METABOLIC REGULATION 16 6.50e-01 9.06e-01 0.12500 0.092200 -0.084500 5.23e-01 5.59e-01
REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES 41 3.48e-01 7.15e-01 0.12400 0.109000 -0.059400 2.30e-01 5.11e-01
REACTOME SIGNALING BY ILS 61 2.11e-01 5.56e-01 0.12300 0.106000 -0.062200 1.53e-01 4.02e-01
REACTOME AXON GUIDANCE 142 2.96e-02 2.32e-01 0.12300 -0.113000 0.048100 2.06e-02 3.25e-01
REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT 29 5.25e-01 8.32e-01 0.12200 0.011400 0.122000 9.16e-01 2.57e-01
REACTOME DOWNSTREAM SIGNALING EVENTS OF B CELL RECEPTOR BCR 82 1.60e-01 4.82e-01 0.12200 0.122000 0.001900 5.70e-02 9.76e-01
REACTOME GROWTH HORMONE RECEPTOR SIGNALING 15 7.14e-01 9.25e-01 0.12100 0.121000 -0.000188 4.16e-01 9.99e-01
REACTOME FORMATION OF THE HIV1 EARLY ELONGATION COMPLEX 28 5.41e-01 8.33e-01 0.12100 -0.003560 -0.121000 9.74e-01 2.70e-01
REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI 12 7.58e-01 9.43e-01 0.12000 0.024400 -0.118000 8.84e-01 4.81e-01
REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE 13 7.80e-01 9.44e-01 0.12000 0.080200 0.089300 6.17e-01 5.78e-01
REACTOME PI3K AKT ACTIVATION 31 5.05e-01 8.18e-01 0.12000 -0.003430 0.120000 9.74e-01 2.49e-01
REACTOME ERKS ARE INACTIVATED 10 7.96e-01 9.44e-01 0.12000 0.118000 -0.021700 5.19e-01 9.05e-01
REACTOME CALNEXIN CALRETICULIN CYCLE 11 7.99e-01 9.44e-01 0.11900 0.026100 0.116000 8.81e-01 5.05e-01
REACTOME SIGNALING BY INSULIN RECEPTOR 73 2.56e-01 6.22e-01 0.11900 0.074800 0.092300 2.70e-01 1.74e-01
REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING 20 6.68e-01 9.06e-01 0.11700 0.017700 0.116000 8.91e-01 3.69e-01
REACTOME PURINE METABOLISM 27 6.11e-01 8.87e-01 0.11700 0.091200 0.073800 4.13e-01 5.07e-01
REACTOME CIRCADIAN CLOCK 42 4.58e-01 7.89e-01 0.11700 0.051400 0.105000 5.65e-01 2.41e-01
REACTOME CELL DEATH SIGNALLING VIA NRAGE NRIF AND NADE 38 4.25e-01 7.69e-01 0.11500 -0.087600 0.074100 3.51e-01 4.30e-01
REACTOME G ALPHA S SIGNALLING EVENTS 28 5.51e-01 8.40e-01 0.11400 -0.108000 0.036200 3.23e-01 7.41e-01
REACTOME PROCESSING OF CAPPED INTRONLESS PRE MRNA 17 7.48e-01 9.42e-01 0.11300 -0.083400 -0.076900 5.52e-01 5.83e-01
REACTOME MITOTIC M M G1 PHASES 96 1.22e-01 4.27e-01 0.11300 0.081700 -0.078600 1.68e-01 1.85e-01
REACTOME NCAM SIGNALING FOR NEURITE OUT GROWTH 35 5.48e-01 8.38e-01 0.11200 0.050300 0.101000 6.07e-01 3.04e-01
REACTOME SCFSKP2 MEDIATED DEGRADATION OF P27 P21 44 4.18e-01 7.65e-01 0.11200 0.110000 -0.020500 2.08e-01 8.14e-01
REACTOME DNA REPLICATION 106 1.13e-01 4.24e-01 0.11100 0.099400 -0.050000 7.81e-02 3.76e-01
REACTOME INSULIN SYNTHESIS AND PROCESSING 13 8.09e-01 9.50e-01 0.11100 0.080600 0.076400 6.15e-01 6.34e-01
REACTOME SIGNALING BY WNT 57 3.13e-01 6.83e-01 0.11000 0.051500 -0.097300 5.02e-01 2.05e-01
REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 46 4.30e-01 7.76e-01 0.11000 0.110000 0.000209 1.98e-01 9.98e-01
REACTOME METABOLISM OF NON CODING RNA 42 5.08e-01 8.18e-01 0.11000 0.092300 0.059200 3.01e-01 5.07e-01
REACTOME PLATELET AGGREGATION PLUG FORMATION 18 7.32e-01 9.29e-01 0.10900 -0.108000 -0.019000 4.30e-01 8.89e-01
REACTOME G PROTEIN BETA GAMMA SIGNALLING 12 8.26e-01 9.50e-01 0.10900 -0.092000 -0.058400 5.81e-01 7.26e-01
REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 14 7.70e-01 9.44e-01 0.10800 -0.107000 0.017500 4.88e-01 9.10e-01
REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION 61 3.40e-01 7.15e-01 0.10800 -0.000115 0.108000 9.99e-01 1.45e-01
REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA 19 7.21e-01 9.25e-01 0.10800 0.011700 0.107000 9.30e-01 4.19e-01
REACTOME SIGNALING BY GPCR 143 6.65e-02 3.30e-01 0.10700 -0.095700 0.047800 4.93e-02 3.26e-01
REACTOME METABOLISM OF VITAMINS AND COFACTORS 36 5.90e-01 8.63e-01 0.10400 0.089800 0.053100 3.52e-01 5.82e-01
REACTOME CA DEPENDENT EVENTS 14 7.92e-01 9.44e-01 0.10400 0.005230 -0.104000 9.73e-01 5.01e-01
REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION 34 5.66e-01 8.47e-01 0.10400 0.009780 -0.103000 9.22e-01 2.98e-01
REACTOME COMPLEMENT CASCADE 11 8.23e-01 9.50e-01 0.10300 0.093700 -0.042900 5.91e-01 8.06e-01
REACTOME DEADENYLATION DEPENDENT MRNA DECAY 37 5.12e-01 8.18e-01 0.10300 0.077900 -0.067100 4.13e-01 4.81e-01
REACTOME PROLONGED ERK ACTIVATION EVENTS 16 8.00e-01 9.44e-01 0.10200 -0.085500 -0.055400 5.54e-01 7.02e-01
REACTOME NEGATIVE REGULATION OF FGFR SIGNALING 17 7.51e-01 9.43e-01 0.10100 -0.032300 0.095900 8.18e-01 4.94e-01
REACTOME TRIGLYCERIDE BIOSYNTHESIS 21 6.93e-01 9.07e-01 0.10100 0.057300 -0.083300 6.49e-01 5.09e-01
REACTOME TRAF6 MEDIATED INDUCTION OF NFKB AND MAP KINASES UPON TLR7 8 OR 9 ACTIVATION 54 4.85e-01 8.06e-01 0.10100 0.075500 0.066600 3.38e-01 3.98e-01
REACTOME INTEGRIN ALPHAIIB BETA3 SIGNALING 17 8.01e-01 9.44e-01 0.09910 -0.078800 -0.060200 5.74e-01 6.68e-01
REACTOME SIGNAL TRANSDUCTION BY L1 28 6.78e-01 9.06e-01 0.09890 0.026700 0.095200 8.07e-01 3.84e-01
REACTOME VITAMIN B5 PANTOTHENATE METABOLISM 10 8.62e-01 9.59e-01 0.09880 0.098800 0.001190 5.89e-01 9.95e-01
REACTOME GLUTATHIONE CONJUGATION 12 8.23e-01 9.50e-01 0.09850 0.089000 -0.042300 5.94e-01 8.00e-01
REACTOME P53 DEPENDENT G1 DNA DAMAGE RESPONSE 47 4.78e-01 8.02e-01 0.09850 0.094700 -0.027000 2.62e-01 7.49e-01
REACTOME G0 AND EARLY G1 11 8.37e-01 9.52e-01 0.09780 0.087000 -0.044700 6.17e-01 7.98e-01
REACTOME ACTIVATION OF NMDA RECEPTOR UPON GLUTAMATE BINDING AND POSTSYNAPTIC EVENTS 17 7.57e-01 9.43e-01 0.09770 0.061600 -0.075800 6.60e-01 5.89e-01
REACTOME POST NMDA RECEPTOR ACTIVATION EVENTS 17 7.57e-01 9.43e-01 0.09770 0.061600 -0.075800 6.60e-01 5.89e-01
REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION 51 4.73e-01 8.00e-01 0.09730 0.096800 -0.009080 2.32e-01 9.11e-01
REACTOME DEVELOPMENTAL BIOLOGY 240 2.38e-02 1.97e-01 0.09690 -0.082100 0.051300 2.96e-02 1.74e-01
REACTOME METABOLISM OF NUCLEOTIDES 48 5.37e-01 8.33e-01 0.09640 0.032400 0.090800 6.98e-01 2.77e-01
REACTOME SEMA4D IN SEMAPHORIN SIGNALING 22 7.04e-01 9.17e-01 0.09630 -0.068800 0.067300 5.77e-01 5.85e-01
REACTOME SIGNAL AMPLIFICATION 14 8.30e-01 9.50e-01 0.09620 -0.093700 -0.021900 5.44e-01 8.87e-01
REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS 279 1.70e-02 1.74e-01 0.09600 -0.091900 0.027700 8.83e-03 4.30e-01
REACTOME PLC BETA MEDIATED EVENTS 20 7.89e-01 9.44e-01 0.09420 -0.055000 -0.076400 6.71e-01 5.54e-01
REACTOME ACTIVATED TLR4 SIGNALLING 58 5.09e-01 8.18e-01 0.09400 0.067000 0.065900 3.78e-01 3.86e-01
REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY 28 6.60e-01 9.06e-01 0.09400 -0.084100 0.041900 4.42e-01 7.02e-01
REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES 107 2.20e-01 5.70e-01 0.09370 0.089900 -0.026400 1.09e-01 6.38e-01
REACTOME G1 PHASE 25 6.89e-01 9.07e-01 0.09320 0.072500 -0.058500 5.31e-01 6.13e-01
REACTOME HIV INFECTION 155 1.25e-01 4.31e-01 0.09300 0.092200 -0.012300 4.88e-02 7.93e-01
REACTOME CLASS I MHC MEDIATED ANTIGEN PROCESSING PRESENTATION 187 6.57e-02 3.30e-01 0.09290 0.068800 -0.062400 1.07e-01 1.44e-01
REACTOME MITOTIC PROMETAPHASE 43 5.43e-01 8.33e-01 0.09280 0.032900 -0.086800 7.09e-01 3.26e-01
REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION 20 7.74e-01 9.44e-01 0.09140 0.003720 -0.091300 9.77e-01 4.80e-01
REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 46 5.63e-01 8.47e-01 0.09120 -0.091100 -0.003200 2.86e-01 9.70e-01
REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES 64 4.94e-01 8.14e-01 0.09110 -0.055400 -0.072400 4.45e-01 3.18e-01
REACTOME GABA B RECEPTOR ACTIVATION 14 8.59e-01 9.58e-01 0.08980 0.077200 0.045900 6.17e-01 7.66e-01
REACTOME CYTOKINE SIGNALING IN IMMUNE SYSTEM 139 1.50e-01 4.63e-01 0.08970 0.061200 -0.065500 2.15e-01 1.84e-01
REACTOME GAB1 SIGNALOSOME 32 6.87e-01 9.07e-01 0.08960 0.013500 0.088500 8.95e-01 3.87e-01
REACTOME SIGNALING BY FGFR MUTANTS 26 7.63e-01 9.43e-01 0.08860 -0.064100 -0.061200 5.72e-01 5.90e-01
REACTOME DESTABILIZATION OF MRNA BY BRF1 16 8.46e-01 9.53e-01 0.08750 0.038300 0.078700 7.91e-01 5.86e-01
REACTOME G ALPHA I SIGNALLING EVENTS 28 7.48e-01 9.42e-01 0.08720 0.039000 0.078000 7.21e-01 4.75e-01
REACTOME DOWNSTREAM TCR SIGNALING 20 7.94e-01 9.44e-01 0.08630 -0.086200 0.005130 5.05e-01 9.68e-01
REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS 14 8.39e-01 9.52e-01 0.08570 -0.070300 0.049000 6.49e-01 7.51e-01
REACTOME METABOLISM OF PORPHYRINS 11 8.76e-01 9.61e-01 0.08560 0.081300 -0.027100 6.41e-01 8.76e-01
REACTOME MYD88 MAL CASCADE INITIATED ON PLASMA MEMBRANE 55 5.84e-01 8.59e-01 0.08560 0.071300 0.047400 3.61e-01 5.44e-01
REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION 162 1.35e-01 4.52e-01 0.08550 0.059800 -0.061100 1.92e-01 1.82e-01
REACTOME NUCLEAR EVENTS KINASE AND TRANSCRIPTION FACTOR ACTIVATION 21 7.74e-01 9.44e-01 0.08520 -0.037300 0.076600 7.67e-01 5.44e-01
REACTOME NEURONAL SYSTEM 89 4.12e-01 7.65e-01 0.08500 -0.079100 -0.031100 1.98e-01 6.13e-01
REACTOME ENOS ACTIVATION AND REGULATION 12 8.86e-01 9.68e-01 0.08470 -0.080200 -0.027400 6.31e-01 8.69e-01
REACTOME DIABETES PATHWAYS 91 3.63e-01 7.15e-01 0.08410 -0.013800 0.082900 8.21e-01 1.73e-01
REACTOME CD28 CO STIMULATION 21 7.78e-01 9.44e-01 0.08370 -0.048100 0.068500 7.03e-01 5.87e-01
REACTOME MAP KINASE ACTIVATION IN TLR CASCADE 40 6.91e-01 9.07e-01 0.08360 0.053100 0.064600 5.62e-01 4.80e-01
REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S 37 6.74e-01 9.06e-01 0.08230 -0.011400 0.081500 9.04e-01 3.91e-01
REACTOME DAG AND IP3 SIGNALING 16 8.45e-01 9.53e-01 0.08230 0.006360 -0.082000 9.65e-01 5.70e-01
REACTOME INNATE IMMUNE SYSTEM 116 3.12e-01 6.83e-01 0.08180 0.081800 0.000811 1.30e-01 9.88e-01
REACTOME OPIOID SIGNALLING 39 6.46e-01 9.06e-01 0.08150 0.039200 -0.071400 6.72e-01 4.41e-01
REACTOME LATE PHASE OF HIV LIFE CYCLE 84 4.71e-01 8.00e-01 0.08130 0.073100 0.035500 2.48e-01 5.75e-01
REACTOME LYSOSOME VESICLE BIOGENESIS 17 8.26e-01 9.50e-01 0.08090 0.063800 -0.049700 6.49e-01 7.23e-01
REACTOME HIV LIFE CYCLE 92 4.19e-01 7.65e-01 0.08070 0.079800 0.012100 1.87e-01 8.42e-01
REACTOME GABA RECEPTOR ACTIVATION 15 8.69e-01 9.59e-01 0.07970 0.009130 0.079200 9.51e-01 5.96e-01
REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE 11 8.96e-01 9.71e-01 0.07960 0.010800 -0.078900 9.51e-01 6.51e-01
REACTOME PRE NOTCH EXPRESSION AND PROCESSING 31 7.31e-01 9.29e-01 0.07750 -0.067800 0.037400 5.14e-01 7.19e-01
REACTOME G ALPHA Z SIGNALLING EVENTS 21 8.11e-01 9.50e-01 0.07670 0.040100 -0.065400 7.50e-01 6.04e-01
REACTOME HEMOSTASIS 211 1.65e-01 4.96e-01 0.07670 -0.076300 -0.008050 5.78e-02 8.41e-01
REACTOME FORMATION OF RNA POL II ELONGATION COMPLEX 35 7.18e-01 9.25e-01 0.07640 0.021100 -0.073400 8.29e-01 4.53e-01
REACTOME SIGNALING BY NODAL 11 8.98e-01 9.71e-01 0.07600 0.039300 -0.065100 8.22e-01 7.09e-01
REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR 10 9.15e-01 9.78e-01 0.07590 -0.075700 0.005170 6.79e-01 9.77e-01
REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX 51 6.48e-01 9.06e-01 0.07570 -0.075500 -0.006460 3.52e-01 9.36e-01
REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS 18 8.69e-01 9.59e-01 0.07510 0.069000 0.029500 6.12e-01 8.28e-01
REACTOME INSULIN RECEPTOR SIGNALLING CASCADE 59 6.49e-01 9.06e-01 0.07460 0.052700 0.052800 4.85e-01 4.84e-01
REACTOME AQUAPORIN MEDIATED TRANSPORT 21 8.51e-01 9.54e-01 0.07320 -0.016200 -0.071400 8.98e-01 5.71e-01
REACTOME REGULATION OF WATER BALANCE BY RENAL AQUAPORINS 21 8.51e-01 9.54e-01 0.07320 -0.016200 -0.071400 8.98e-01 5.71e-01
REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION 98 4.22e-01 7.68e-01 0.07310 0.028000 -0.067500 6.34e-01 2.50e-01
REACTOME SIGNALING BY NOTCH4 10 9.31e-01 9.78e-01 0.07260 -0.033800 -0.064300 8.53e-01 7.25e-01
REACTOME PI METABOLISM 37 7.63e-01 9.43e-01 0.07150 0.017400 0.069400 8.55e-01 4.66e-01
REACTOME EFFECTS OF PIP2 HYDROLYSIS 13 9.16e-01 9.78e-01 0.07150 0.051100 0.050000 7.50e-01 7.55e-01
REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE 10 9.34e-01 9.78e-01 0.07130 0.060900 0.037200 7.39e-01 8.39e-01
REACTOME P75 NTR RECEPTOR MEDIATED SIGNALLING 52 7.01e-01 9.15e-01 0.07120 0.061600 0.035800 4.43e-01 6.56e-01
REACTOME TGF BETA RECEPTOR SIGNALING ACTIVATES SMADS 23 8.22e-01 9.50e-01 0.07040 -0.049900 0.049700 6.79e-01 6.80e-01
REACTOME RORA ACTIVATES CIRCADIAN EXPRESSION 21 8.63e-01 9.59e-01 0.07020 0.018100 0.067800 8.86e-01 5.91e-01
REACTOME SIGNALING BY ERBB2 68 6.41e-01 9.06e-01 0.06810 0.065500 0.018600 3.51e-01 7.91e-01
REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1 19 8.72e-01 9.60e-01 0.06790 0.067700 -0.005880 6.10e-01 9.65e-01
REACTOME SIGNALING BY NOTCH1 50 6.91e-01 9.07e-01 0.06780 0.015800 -0.065900 8.47e-01 4.21e-01
REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS 43 7.67e-01 9.44e-01 0.06400 0.001630 0.064000 9.85e-01 4.68e-01
REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING 36 7.91e-01 9.44e-01 0.06360 0.061900 -0.014700 5.21e-01 8.79e-01
REACTOME SIGNALING BY PDGF 85 5.61e-01 8.47e-01 0.06340 -0.035300 0.052600 5.75e-01 4.03e-01
REACTOME INTERFERON SIGNALING 76 6.12e-01 8.87e-01 0.06300 0.060000 -0.019200 3.67e-01 7.73e-01
REACTOME ASPARAGINE N LINKED GLYCOSYLATION 62 6.62e-01 9.06e-01 0.06240 0.043500 -0.044700 5.55e-01 5.43e-01
REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION 17 8.94e-01 9.71e-01 0.06230 -0.051800 0.034600 7.12e-01 8.05e-01
REACTOME RNA POL II PRE TRANSCRIPTION EVENTS 48 7.48e-01 9.42e-01 0.06210 0.061500 -0.008250 4.62e-01 9.21e-01
REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION 106 5.19e-01 8.27e-01 0.06060 -0.051900 0.031300 3.57e-01 5.79e-01
REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR 60 7.23e-01 9.25e-01 0.06030 0.060200 0.004510 4.21e-01 9.52e-01
REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS 15 9.28e-01 9.78e-01 0.06030 -0.028000 -0.053400 8.51e-01 7.20e-01
REACTOME ADAPTIVE IMMUNE SYSTEM 332 1.83e-01 5.37e-01 0.05790 0.008220 -0.057300 7.99e-01 7.56e-02
REACTOME SIGNALLING TO ERKS 28 8.54e-01 9.55e-01 0.05730 0.041300 -0.039800 7.06e-01 7.16e-01
REACTOME SIGNALING BY FGFR1 FUSION MUTANTS 16 9.26e-01 9.78e-01 0.05520 0.009460 -0.054300 9.48e-01 7.07e-01
REACTOME REGULATION OF SIGNALING BY CBL 13 9.49e-01 9.90e-01 0.05490 -0.043800 -0.033200 7.85e-01 8.36e-01
REACTOME ERK MAPK TARGETS 18 9.17e-01 9.78e-01 0.05490 -0.011500 0.053700 9.33e-01 6.94e-01
REACTOME MHC CLASS II ANTIGEN PRESENTATION 59 7.83e-01 9.44e-01 0.05470 -0.019400 -0.051100 7.97e-01 4.98e-01
REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS 15 9.28e-01 9.78e-01 0.05440 -0.026200 0.047700 8.61e-01 7.49e-01
REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB 10 9.55e-01 9.92e-01 0.05430 0.054000 -0.005190 7.67e-01 9.77e-01
REACTOME G BETA GAMMA SIGNALLING THROUGH PI3KGAMMA 11 9.56e-01 9.92e-01 0.05410 -0.051800 -0.015800 7.66e-01 9.28e-01
REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS 16 9.27e-01 9.78e-01 0.05340 0.048500 -0.022300 7.37e-01 8.77e-01
REACTOME GENERIC TRANSCRIPTION PATHWAY 135 5.81e-01 8.57e-01 0.05320 0.011100 0.052000 8.24e-01 2.99e-01
REACTOME METABOLISM OF CARBOHYDRATES 129 5.72e-01 8.47e-01 0.05050 -0.032300 0.038900 5.28e-01 4.48e-01
REACTOME REGULATION OF MRNA STABILITY BY PROTEINS THAT BIND AU RICH ELEMENTS 73 7.73e-01 9.44e-01 0.05050 0.047300 0.017600 4.86e-01 7.95e-01
REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES 43 8.32e-01 9.50e-01 0.05000 0.035300 -0.035400 6.89e-01 6.89e-01
REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS 24 9.06e-01 9.78e-01 0.04990 0.046400 -0.018500 6.94e-01 8.76e-01
REACTOME REGULATORY RNA PATHWAYS 21 9.25e-01 9.78e-01 0.04970 0.049700 0.001110 6.94e-01 9.93e-01
REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION 53 8.22e-01 9.50e-01 0.04700 0.022100 -0.041400 7.81e-01 6.02e-01
REACTOME TOLL RECEPTOR CASCADES 70 8.15e-01 9.50e-01 0.04630 0.020400 0.041600 7.69e-01 5.48e-01
REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK 58 8.32e-01 9.50e-01 0.04330 -0.037400 0.021800 6.23e-01 7.74e-01
REACTOME SYNTHESIS OF PA 11 9.73e-01 9.94e-01 0.04290 0.020100 0.037900 9.08e-01 8.28e-01
REACTOME IMMUNE SYSTEM 503 2.45e-01 6.03e-01 0.04140 0.030300 -0.028200 2.52e-01 2.87e-01
REACTOME EGFR DOWNREGULATION 23 9.35e-01 9.78e-01 0.04130 -0.022500 0.034600 8.52e-01 7.74e-01
REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE 13 9.71e-01 9.94e-01 0.03930 0.006400 0.038800 9.68e-01 8.09e-01
REACTOME SIGNALING BY FGFR IN DISEASE 81 8.16e-01 9.50e-01 0.03840 0.030200 -0.023700 6.39e-01 7.13e-01
REACTOME PHOSPHOLIPASE C MEDIATED CASCADE 20 9.60e-01 9.94e-01 0.03830 -0.013200 -0.035900 9.19e-01 7.81e-01
REACTOME SIGNALING BY FGFR 69 8.67e-01 9.59e-01 0.03720 0.037200 0.001190 5.94e-01 9.86e-01
REACTOME SIGNALING BY EGFR IN CANCER 83 8.45e-01 9.53e-01 0.03530 0.033600 -0.011000 5.98e-01 8.62e-01
REACTOME SIGNALING BY NOTCH 74 8.90e-01 9.69e-01 0.03460 -0.021800 -0.026900 7.47e-01 6.90e-01
REACTOME SIGNALLING BY NGF 153 7.87e-01 9.44e-01 0.03370 0.011500 0.031700 8.08e-01 5.01e-01
REACTOME KERATAN SULFATE BIOSYNTHESIS 11 9.81e-01 9.96e-01 0.03310 -0.032400 0.007030 8.53e-01 9.68e-01
REACTOME MITOTIC G2 G2 M PHASES 49 9.32e-01 9.78e-01 0.03310 -0.025100 -0.021500 7.62e-01 7.95e-01
REACTOME KERATAN SULFATE KERATIN METABOLISM 14 9.74e-01 9.94e-01 0.03300 0.022100 -0.024600 8.86e-01 8.74e-01
REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER 31 9.62e-01 9.94e-01 0.03070 -0.019600 -0.023700 8.51e-01 8.20e-01
REACTOME NGF SIGNALLING VIA TRKA FROM THE PLASMA MEMBRANE 101 8.80e-01 9.63e-01 0.03000 0.007210 0.029100 9.01e-01 6.15e-01
REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX 27 9.69e-01 9.94e-01 0.02660 0.010800 -0.024300 9.23e-01 8.27e-01
REACTOME DOWNSTREAM SIGNAL TRANSDUCTION 71 9.29e-01 9.78e-01 0.02480 0.013300 -0.021000 8.46e-01 7.61e-01
REACTOME SPRY REGULATION OF FGF SIGNALING 12 9.89e-01 9.96e-01 0.02470 0.001960 0.024600 9.91e-01 8.83e-01
REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES 32 9.75e-01 9.94e-01 0.02360 -0.022800 -0.006300 8.24e-01 9.51e-01
REACTOME JNK C JUN KINASES PHOSPHORYLATION AND ACTIVATION MEDIATED BY ACTIVATED HUMAN TAK1 12 9.92e-01 9.96e-01 0.02220 0.009510 0.020000 9.55e-01 9.05e-01
REACTOME APOPTOSIS 96 9.34e-01 9.78e-01 0.02070 0.019000 -0.008350 7.48e-01 8.88e-01
REACTOME REGULATION OF INSULIN SECRETION 39 9.81e-01 9.96e-01 0.01800 0.017900 0.001920 8.47e-01 9.83e-01
REACTOME SIGNALING BY FGFR1 MUTANTS 20 9.92e-01 9.96e-01 0.01750 -0.010700 -0.013800 9.34e-01 9.15e-01
REACTOME INTEGRATION OF ENERGY METABOLISM 62 9.73e-01 9.94e-01 0.01650 0.015200 -0.006240 8.36e-01 9.32e-01
REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES 14 9.95e-01 9.97e-01 0.01560 0.015400 0.002580 9.21e-01 9.87e-01
REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES 38 9.90e-01 9.96e-01 0.01310 0.013100 -0.000327 8.89e-01 9.97e-01
REACTOME PHOSPHOLIPID METABOLISM 114 9.88e-01 9.96e-01 0.00810 -0.007800 0.002190 8.86e-01 9.68e-01
REACTOME DESTABILIZATION OF MRNA BY KSRP 14 1.00e+00 1.00e+00 0.00311 -0.000761 0.003010 9.96e-01 9.84e-01



Detailed Gene set reports


REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE

REACTOME_CITRIC_ACID_CYCLE_TCA_CYCLE
metric value
setSize 19
pMANOVA 3.62e-09
p.adjustMANOVA 1.04e-07
s.dist 0.799
s.ctrl -0.784
s.Acss2KD 0.155
p.ctrl 3.23e-09
p.Acss2KD 0.242




Top 20 genes
Gene ctrl Acss2KD
Fh1 -3688 2783
Idh3b -3394 2629
Ogdh -3389 2604
Dld -2931 2747
Sucla2 -3523 1950
Sdhb -4362 1552
Dlst -3144 1623
Suclg1 -3852 1041
Nnt -4248 797
Aco2 -1645 1948
Idh3a -3237 509
Idh3g -3533 173
Sdhd -3740 6

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Aco2 -1645 1948
Cs -3381 -821
Dld -2931 2747
Dlst -3144 1623
Fh1 -3688 2783
Idh2 -4392 -344
Idh3a -3237 509
Idh3b -3394 2629
Idh3g -3533 173
Mdh2 -4028 -1792
Nnt -4248 797
Ogdh -3389 2604
Sdha -3787 -290
Sdhb -4362 1552
Sdhc -3581 -767
Sdhd -3740 6
Sucla2 -3523 1950
Suclg1 -3852 1041
Suclg2 -3306 -3226





REACTOME_PEPTIDE_CHAIN_ELONGATION

REACTOME_PEPTIDE_CHAIN_ELONGATION
metric value
setSize 66
pMANOVA 2.57e-26
p.adjustMANOVA 3.95e-24
s.dist 0.741
s.ctrl 0.715
s.Acss2KD -0.196
p.ctrl 9.48e-24
p.Acss2KD 0.00589




Top 20 genes
Gene ctrl Acss2KD
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Rpl38 4075 -2266
Rpl36al 4092 -2051
Rpl19 4402 -1857
Rps25 4326 -1875
Rps7 3597 -2184

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Eef1a1 3477.0 -2105.0
Eef2 4494.0 -509.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Uba52 1296.0 738.0





REACTOME_MITOCHONDRIAL_FATTY_ACID_BETA_OXIDATION

REACTOME_MITOCHONDRIAL_FATTY_ACID_BETA_OXIDATION
metric value
setSize 13
pMANOVA 1.3e-05
p.adjustMANOVA 0.000287
s.dist 0.722
s.ctrl -0.674
s.Acss2KD 0.261
p.ctrl 2.61e-05
p.Acss2KD 0.103




Top 20 genes
Gene ctrl Acss2KD
Acadvl -4365 2909
Acadl -3819 3233
Pcca -2815 3782
Hadhb -4344 1789
Hadha -3660 1557
Decr1 -4220 1138
Eci1 -4414 1075
Acads -3743 836
Acadm -4333 232
Mcee -1990 426
Echs1 -67 1818

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Acadl -3819 3233
Acadm -4333 232
Acads -3743 836
Acadvl -4365 2909
Decr1 -4220 1138
Echs1 -67 1818
Eci1 -4414 1075
Hadh -4161 -2985
Hadha -3660 1557
Hadhb -4344 1789
Mcee -1990 426
Pcca -2815 3782
Pccb 2571 -499





REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX

REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX
metric value
setSize 41
pMANOVA 7.95e-16
p.adjustMANOVA 3.06e-14
s.dist 0.72
s.ctrl 0.686
s.Acss2KD -0.217
p.ctrl 2.9e-14
p.Acss2KD 0.0164




Top 20 genes
Gene ctrl Acss2KD
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rps9 4321 -2721
Rps14 3836 -2815
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Eif3j2 2508 -3837
Rps25 4326 -1875
Rps7 3597 -2184
Eif3b 3353 -1965
Rps11 1663 -3764
Eif3i 3800 -1632
Rps29 2286 -2584
Eif3f 2064 -2807
Rps6 3758 -1321
Rps23 4232 -1084
Eif3g 3427 -1282

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Eif1ax -807 -1287
Eif2s1 -1448 -2281
Eif2s2 2496 -1744
Eif2s3x 4435 2022
Eif3a 3552 739
Eif3b 3353 -1965
Eif3c 3576 -1138
Eif3d 3308 -894
Eif3e 4230 3083
Eif3f 2064 -2807
Eif3g 3427 -1282
Eif3h 830 4152
Eif3i 3800 -1632
Eif3j2 2508 -3837
Eif3k 2040 2530
Rps11 1663 -3764
Rps13 3015 2086
Rps14 3836 -2815
Rps15a 3088 -125
Rps16 4110 -301
Rps17 2325 319
Rps18 3501 -889
Rps19 4264 -190
Rps20 3843 -2669
Rps21 3981 -3337
Rps23 4232 -1084
Rps24 4124 -3163
Rps25 4326 -1875
Rps26 3438 -2966
Rps27 4015 -3368
Rps27a 2463 645
Rps29 2286 -2584
Rps3 4276 1036
Rps3a1 4505 -891
Rps4x 4410 -2262
Rps5 4148 2414
Rps6 3758 -1321
Rps7 3597 -2184
Rps8 2870 -3674
Rps9 4321 -2721
Rpsa 4244 273





REACTOME_RESPIRATORY_ELECTRON_TRANSPORT

REACTOME_RESPIRATORY_ELECTRON_TRANSPORT
metric value
setSize 59
pMANOVA 1.07e-19
p.adjustMANOVA 6.17e-18
s.dist 0.692
s.ctrl -0.691
s.Acss2KD 0.0419
p.ctrl 4.36e-20
p.Acss2KD 0.579




Top 20 genes
Gene ctrl Acss2KD
Ndufb2 -3309 3795
Ndufb5 -3877 3221
Cycs -4176 2966
Cox6c -4072 2901
Ndufs8 -3627 3195
Ndufb10 -3729 2967
Etfa -3966 2436
Etfdh -3947 2380
Ndufs1 -4168 2070
Ndufa2 -3099 2368
Sdhb -4362 1552
Uqcrc2 -3813 1706
Ndufab1 -3471 1855
Ndufa9 -3950 1597
Ndufb4 -3294 1551
Ndufa5 -3861 1274
Ndufa4 -3304 1436
Ndufv2 -2787 1647
Uqcrq -4320 1028
Ndufs2 -1622 2229

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Cox4i1 -3891 -613
Cox5a -3039 -256
Cox6a1 3247 3373
Cox6b1 -3845 258
Cox6c -4072 2901
Cox7a2l -2648 -165
Cox7c -3797 -1667
Cox8a 2222 -2160
Cyc1 -4021 -22
Cycs -4176 2966
Etfa -3966 2436
Etfb -3983 -764
Etfdh -3947 2380
Ndufa1 -2755 -2153
Ndufa10 -2708 790
Ndufa11 -4179 -1782
Ndufa12 103 1373
Ndufa13 -1962 -3304
Ndufa2 -3099 2368
Ndufa3 -3455 762
Ndufa4 -3304 1436
Ndufa5 -3861 1274
Ndufa6 -3379 945
Ndufa7 -862 -1839
Ndufa8 -3177 423
Ndufa9 -3950 1597
Ndufab1 -3471 1855
Ndufb10 -3729 2967
Ndufb2 -3309 3795
Ndufb3 -4374 322
Ndufb4 -3294 1551
Ndufb5 -3877 3221
Ndufb6 -3670 -1929
Ndufb7 -3801 -2700
Ndufb9 -3345 -594
Ndufc1 -3299 -137
Ndufc2 -1431 -852
Ndufs1 -4168 2070
Ndufs2 -1622 2229
Ndufs3 -1691 -1444
Ndufs4 -4022 -743
Ndufs5 -2868 -2028
Ndufs6 -4112 -1253
Ndufs7 -2344 -2877
Ndufs8 -3627 3195
Ndufv1 -4367 -3206
Ndufv2 -2787 1647
Ndufv3 36 -2718
Sdha -3787 -290
Sdhb -4362 1552
Sdhc -3581 -767
Sdhd -3740 6
Uqcr11 -2210 -3868
Uqcrb -3575 -35
Uqcrc1 -4192 -1083
Uqcrc2 -3813 1706
Uqcrfs1 -4017 -240
Uqcrh -3064 -975
Uqcrq -4320 1028





REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING

REACTOME_FORMATION_OF_ATP_BY_CHEMIOSMOTIC_COUPLING
metric value
setSize 12
pMANOVA 0.000222
p.adjustMANOVA 0.00447
s.dist 0.687
s.ctrl -0.684
s.Acss2KD -0.0687
p.ctrl 4.14e-05
p.Acss2KD 0.681




Top 20 genes
Gene ctrl Acss2KD
Atp5j2 -4065 -2929
Atp5j -3639 -1702
Atp5d -1717 -1664
Atp5h -1884 -1236
Atp5k -3446 -425
Atp5a1 -3393 -325
Atp5e -1772 -595
Atp5l -3469 -113

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Atp5a1 -3393 -325
Atp5b -3297 78
Atp5c1 -3225 2863
Atp5d -1717 -1664
Atp5e -1772 -595
Atp5g1 -4142 980
Atp5h -1884 -1236
Atp5j -3639 -1702
Atp5j2 -4065 -2929
Atp5k -3446 -425
Atp5l -3469 -113
Atp5o -2838 1000





REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S

REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S
metric value
setSize 48
pMANOVA 1.86e-16
p.adjustMANOVA 8.61e-15
s.dist 0.683
s.ctrl 0.66
s.Acss2KD -0.172
p.ctrl 2.43e-15
p.Acss2KD 0.0393




Top 20 genes
Gene ctrl Acss2KD
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rps9 4321 -2721
Rps14 3836 -2815
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Eif3j2 2508 -3837
Eif4h 3551 -2504
Rps25 4326 -1875
Rps7 3597 -2184
Eif3b 3353 -1965
Rps11 1663 -3764
Eif3i 3800 -1632
Rps29 2286 -2584
Eif3f 2064 -2807
Eif4a1 1522 -3726
Rps6 3758 -1321

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Eif1ax -807 -1287
Eif2s1 -1448 -2281
Eif2s2 2496 -1744
Eif2s3x 4435 2022
Eif3a 3552 739
Eif3b 3353 -1965
Eif3c 3576 -1138
Eif3d 3308 -894
Eif3e 4230 3083
Eif3f 2064 -2807
Eif3g 3427 -1282
Eif3h 830 4152
Eif3i 3800 -1632
Eif3j2 2508 -3837
Eif3k 2040 2530
Eif4a1 1522 -3726
Eif4a2 2507 3604
Eif4b 4639 677
Eif4e -1341 -542
Eif4ebp1 4612 3878
Eif4g1 1298 1369
Eif4h 3551 -2504
Rps11 1663 -3764
Rps13 3015 2086
Rps14 3836 -2815
Rps15a 3088 -125
Rps16 4110 -301
Rps17 2325 319
Rps18 3501 -889
Rps19 4264 -190
Rps20 3843 -2669
Rps21 3981 -3337
Rps23 4232 -1084
Rps24 4124 -3163
Rps25 4326 -1875
Rps26 3438 -2966
Rps27 4015 -3368
Rps27a 2463 645
Rps29 2286 -2584
Rps3 4276 1036
Rps3a1 4505 -891
Rps4x 4410 -2262
Rps5 4148 2414
Rps6 3758 -1321
Rps7 3597 -2184
Rps8 2870 -3674
Rps9 4321 -2721
Rpsa 4244 273





REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION

REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION
metric value
setSize 85
pMANOVA 2.9e-28
p.adjustMANOVA 6.7e-26
s.dist 0.68
s.ctrl 0.66
s.Acss2KD -0.164
p.ctrl 7.31e-26
p.Acss2KD 0.00906




Top 20 genes
Gene ctrl Acss2KD
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Eif3j2 2508 -3837
Rpl38 4075 -2266
Eif4h 3551 -2504
Rpl36al 4092 -2051
Rpl19 4402 -1857

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Eif1ax -807.0 -1287.0
Eif2s1 -1448.0 -2281.0
Eif2s2 2496.0 -1744.0
Eif2s3x 4435.0 2022.0
Eif3a 3552.0 739.0
Eif3b 3353.0 -1965.0
Eif3c 3576.0 -1138.0
Eif3d 3308.0 -894.0
Eif3e 4230.0 3083.0
Eif3f 2064.0 -2807.0
Eif3g 3427.0 -1282.0
Eif3h 830.0 4152.0
Eif3i 3800.0 -1632.0
Eif3j2 2508.0 -3837.0
Eif3k 2040.0 2530.0
Eif4a1 1522.0 -3726.0
Eif4a2 2507.0 3604.0
Eif4b 4639.0 677.0
Eif4e -1341.0 -542.0
Eif4g1 1298.0 1369.0
Eif4h 3551.0 -2504.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Uba52 1296.0 738.0





REACTOME_SIGNALING_BY_HIPPO

REACTOME_SIGNALING_BY_HIPPO
metric value
setSize 15
pMANOVA 8.57e-05
p.adjustMANOVA 0.0018
s.dist 0.659
s.ctrl -0.147
s.Acss2KD -0.642
p.ctrl 0.326
p.Acss2KD 1.66e-05




Top 20 genes
Gene ctrl Acss2KD
Wwtr1 -4139 -4594
Amot -4495 -3893
Sav1 -3795 -4464
Yap1 -3535 -3912
Tjp1 -2864 -4168
Lats2 -2363 -2291
Mob1b -2834 -1627
Stk4 -200 -4323
Amotl1 -138 -3634

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Amot -4495 -3893
Amotl1 -138 -3634
Amotl2 4096 -1727
Dvl2 1470 -2998
Lats1 104 1648
Lats2 -2363 -2291
Mob1a 2939 -2329
Mob1b -2834 -1627
Sav1 -3795 -4464
Stk4 -200 -4323
Tjp1 -2864 -4168
Wwtr1 -4139 -4594
Yap1 -3535 -3912
Ywhab 3629 -2108
Ywhae 3085 -4252





REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_

REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_
metric value
setSize 73
pMANOVA 4.12e-21
p.adjustMANOVA 3.18e-19
s.dist 0.647
s.ctrl -0.646
s.Acss2KD 0.0254
p.ctrl 1.29e-21
p.Acss2KD 0.709




Top 20 genes
Gene ctrl Acss2KD
Ndufb2 -3309 3795
Ndufb5 -3877 3221
Cycs -4176 2966
Cox6c -4072 2901
Ndufs8 -3627 3195
Ndufb10 -3729 2967
Etfa -3966 2436
Etfdh -3947 2380
Atp5c1 -3225 2863
Ndufs1 -4168 2070
Ndufa2 -3099 2368
Sdhb -4362 1552
Uqcrc2 -3813 1706
Ndufab1 -3471 1855
Ndufa9 -3950 1597
Ndufb4 -3294 1551
Ndufa5 -3861 1274
Ndufa4 -3304 1436
Ndufv2 -2787 1647
Uqcrq -4320 1028

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Atp5a1 -3393 -325
Atp5b -3297 78
Atp5c1 -3225 2863
Atp5d -1717 -1664
Atp5e -1772 -595
Atp5g1 -4142 980
Atp5h -1884 -1236
Atp5j -3639 -1702
Atp5j2 -4065 -2929
Atp5k -3446 -425
Atp5l -3469 -113
Atp5o -2838 1000
Cox4i1 -3891 -613
Cox5a -3039 -256
Cox6a1 3247 3373
Cox6b1 -3845 258
Cox6c -4072 2901
Cox7a2l -2648 -165
Cox7c -3797 -1667
Cox8a 2222 -2160
Cyc1 -4021 -22
Cycs -4176 2966
Etfa -3966 2436
Etfb -3983 -764
Etfdh -3947 2380
Ndufa1 -2755 -2153
Ndufa10 -2708 790
Ndufa11 -4179 -1782
Ndufa12 103 1373
Ndufa13 -1962 -3304
Ndufa2 -3099 2368
Ndufa3 -3455 762
Ndufa4 -3304 1436
Ndufa5 -3861 1274
Ndufa6 -3379 945
Ndufa7 -862 -1839
Ndufa8 -3177 423
Ndufa9 -3950 1597
Ndufab1 -3471 1855
Ndufb10 -3729 2967
Ndufb2 -3309 3795
Ndufb3 -4374 322
Ndufb4 -3294 1551
Ndufb5 -3877 3221
Ndufb6 -3670 -1929
Ndufb7 -3801 -2700
Ndufb9 -3345 -594
Ndufc1 -3299 -137
Ndufc2 -1431 -852
Ndufs1 -4168 2070
Ndufs2 -1622 2229
Ndufs3 -1691 -1444
Ndufs4 -4022 -743
Ndufs5 -2868 -2028
Ndufs6 -4112 -1253
Ndufs7 -2344 -2877
Ndufs8 -3627 3195
Ndufv1 -4367 -3206
Ndufv2 -2787 1647
Ndufv3 36 -2718
Sdha -3787 -290
Sdhb -4362 1552
Sdhc -3581 -767
Sdhd -3740 6
Ucp2 4181 -3064
Ucp3 4548 3954
Uqcr11 -2210 -3868
Uqcrb -3575 -35
Uqcrc1 -4192 -1083
Uqcrc2 -3813 1706
Uqcrfs1 -4017 -240
Uqcrh -3064 -975
Uqcrq -4320 1028





REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE

REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE
metric value
setSize 88
pMANOVA 1.08e-24
p.adjustMANOVA 1e-22
s.dist 0.622
s.ctrl 0.599
s.Acss2KD -0.166
p.ctrl 2.59e-22
p.Acss2KD 0.00727




Top 20 genes
Gene ctrl Acss2KD
Sec11c 3886 -4502
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Rpl38 4075 -2266
Rpl36al 4092 -2051
Rpl19 4402 -1857
Rps25 4326 -1875

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Ddost 1043.0 -1045.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rpn1 3667.0 532.0
Rpn2 3957.0 -1569.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Sec11a 977.0 502.0
Sec11c 3886.0 -4502.0
Sec61a1 -1711.0 3339.0
Sec61a2 583.0 -180.0
Sec61b 1520.0 -3616.0
Sec61g 613.0 -1478.0
Spcs1 1505.0 3097.0
Spcs2 3923.0 1819.0
Spcs3 600.0 -1395.0
Srp14 -74.0 -2322.0
Srp19 -1558.0 2614.0
Srp54a 850.0 -702.0
Srp68 1787.0 -708.0
Srp72 4312.0 516.0
Srp9 -507.0 -3107.0
Srprb -280.0 -2664.0
Ssr1 3149.0 1189.0
Ssr2 2453.0 788.0
Ssr3 2025.0 -2933.0
Ssr4 4275.0 1292.0
Tram1 -2520.0 48.0
Uba52 1296.0 738.0





REACTOME_REGULATION_OF_PYRUVATE_DEHYDROGENASE_PDH_COMPLEX

REACTOME_REGULATION_OF_PYRUVATE_DEHYDROGENASE_PDH_COMPLEX
metric value
setSize 11
pMANOVA 0.00151
p.adjustMANOVA 0.025
s.dist 0.593
s.ctrl -0.537
s.Acss2KD 0.252
p.ctrl 0.00204
p.Acss2KD 0.148




Top 20 genes
Gene ctrl Acss2KD
Pdpr -3949 3401
Pdhb -2870 3037
Dld -2931 2747
Pdha1 -3146 1714

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Dlat -4402 -1582
Dld -2931 2747
Pdha1 -3146 1714
Pdhb -2870 3037
Pdhx -3449 -78
Pdk1 -4404 -57
Pdk2 -3105 -766
Pdk4 3721 4210
Pdp1 -2614 -4442
Pdp2 748 4336
Pdpr -3949 3401





REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION

REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION
metric value
setSize 82
pMANOVA 5.39e-21
p.adjustMANOVA 3.56e-19
s.dist 0.592
s.ctrl 0.571
s.Acss2KD -0.159
p.ctrl 4.29e-19
p.Acss2KD 0.013




Top 20 genes
Gene ctrl Acss2KD
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Rpl38 4075 -2266
Rpl36al 4092 -2051
Rpl19 4402 -1857
Rps25 4326 -1875
Rps7 3597 -2184

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Dnajc3 -237.0 -1762.0
Grsf1 -115.0 2623.0
Gtf2f1 4311.0 -1183.0
Gtf2f2 3129.0 256.0
Hsp90aa1 -3804.0 4242.0
Ipo5 1577.0 2116.0
Polr2a 4239.0 -873.0
Polr2b -343.0 2509.0
Polr2c 2894.0 616.0
Polr2d -602.0 -1600.0
Polr2e -49.0 176.0
Polr2f -3736.0 -3959.0
Polr2g 453.0 1638.0
Polr2h 1675.0 -2060.0
Polr2i 719.0 1808.0
Polr2j -987.0 -93.0
Polr2k -3021.0 -3287.0
Polr2l 937.0 -4440.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Uba52 1296.0 738.0





REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT

REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT
metric value
setSize 107
pMANOVA 5.12e-26
p.adjustMANOVA 5.91e-24
s.dist 0.591
s.ctrl -0.588
s.Acss2KD 0.062
p.ctrl 8.74e-26
p.Acss2KD 0.269




Top 20 genes
Gene ctrl Acss2KD
Slc16a1 -3217 4488
Pdpr -3949 3401
Ndufb2 -3309 3795
Ndufb5 -3877 3221
Cycs -4176 2966
Cox6c -4072 2901
Ndufs8 -3627 3195
Ndufb10 -3729 2967
Fh1 -3688 2783
Etfa -3966 2436
Etfdh -3947 2380
Atp5c1 -3225 2863
Idh3b -3394 2629
Ogdh -3389 2604
Pdhb -2870 3037
Ndufs1 -4168 2070
Dld -2931 2747
Ndufa2 -3099 2368
Sucla2 -3523 1950
Sdhb -4362 1552

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Aco2 -1645 1948
Adhfe1 3212 -1601
Atp5a1 -3393 -325
Atp5b -3297 78
Atp5c1 -3225 2863
Atp5d -1717 -1664
Atp5e -1772 -595
Atp5g1 -4142 980
Atp5h -1884 -1236
Atp5j -3639 -1702
Atp5j2 -4065 -2929
Atp5k -3446 -425
Atp5l -3469 -113
Atp5o -2838 1000
Bsg 4237 578
Cox4i1 -3891 -613
Cox5a -3039 -256
Cox6a1 3247 3373
Cox6b1 -3845 258
Cox6c -4072 2901
Cox7a2l -2648 -165
Cox7c -3797 -1667
Cox8a 2222 -2160
Cs -3381 -821
Cyc1 -4021 -22
Cycs -4176 2966
D2hgdh 2362 -4378
Dlat -4402 -1582
Dld -2931 2747
Dlst -3144 1623
Etfa -3966 2436
Etfb -3983 -764
Etfdh -3947 2380
Fh1 -3688 2783
Idh1 4346 4023
Idh2 -4392 -344
Idh3a -3237 509
Idh3b -3394 2629
Idh3g -3533 173
L2hgdh -4284 -2139
Ldha 3361 -1615
Ldhb -4338 1221
Mdh2 -4028 -1792
Ndufa1 -2755 -2153
Ndufa10 -2708 790
Ndufa11 -4179 -1782
Ndufa12 103 1373
Ndufa13 -1962 -3304
Ndufa2 -3099 2368
Ndufa3 -3455 762
Ndufa4 -3304 1436
Ndufa5 -3861 1274
Ndufa6 -3379 945
Ndufa7 -862 -1839
Ndufa8 -3177 423
Ndufa9 -3950 1597
Ndufab1 -3471 1855
Ndufb10 -3729 2967
Ndufb2 -3309 3795
Ndufb3 -4374 322
Ndufb4 -3294 1551
Ndufb5 -3877 3221
Ndufb6 -3670 -1929
Ndufb7 -3801 -2700
Ndufb9 -3345 -594
Ndufc1 -3299 -137
Ndufc2 -1431 -852
Ndufs1 -4168 2070
Ndufs2 -1622 2229
Ndufs3 -1691 -1444
Ndufs4 -4022 -743
Ndufs5 -2868 -2028
Ndufs6 -4112 -1253
Ndufs7 -2344 -2877
Ndufs8 -3627 3195
Ndufv1 -4367 -3206
Ndufv2 -2787 1647
Ndufv3 36 -2718
Nnt -4248 797
Ogdh -3389 2604
Pdha1 -3146 1714
Pdhb -2870 3037
Pdhx -3449 -78
Pdk1 -4404 -57
Pdk2 -3105 -766
Pdk4 3721 4210
Pdp1 -2614 -4442
Pdp2 748 4336
Pdpr -3949 3401
Sdha -3787 -290
Sdhb -4362 1552
Sdhc -3581 -767
Sdhd -3740 6
Slc16a1 -3217 4488
Slc16a3 1223 -1989
Sucla2 -3523 1950
Suclg1 -3852 1041
Suclg2 -3306 -3226
Ucp2 4181 -3064
Ucp3 4548 3954
Uqcr11 -2210 -3868
Uqcrb -3575 -35
Uqcrc1 -4192 -1083
Uqcrc2 -3813 1706
Uqcrfs1 -4017 -240
Uqcrh -3064 -975
Uqcrq -4320 1028





REACTOME_TRANSLATION

REACTOME_TRANSLATION
metric value
setSize 123
pMANOVA 5.64e-30
p.adjustMANOVA 2.6e-27
s.dist 0.586
s.ctrl 0.573
s.Acss2KD -0.123
p.ctrl 6.07e-28
p.Acss2KD 0.0189




Top 20 genes
Gene ctrl Acss2KD
Sec11c 3886 -4502
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Eif3j2 2508 -3837
Rpl38 4075 -2266
Eif4h 3551 -2504
Rpl36al 4092 -2051

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Ddost 1043.0 -1045.0
Eef1a1 3477.0 -2105.0
Eef1b2 3186.0 -1116.0
Eef1d 2715.0 3853.0
Eef1g 4598.0 2855.0
Eef2 4494.0 -509.0
Eif1ax -807.0 -1287.0
Eif2b1 -743.0 -1187.0
Eif2b2 2577.0 -994.0
Eif2b3 4628.0 700.0
Eif2b4 1005.0 203.0
Eif2b5 -2654.0 -3675.0
Eif2s1 -1448.0 -2281.0
Eif2s2 2496.0 -1744.0
Eif2s3x 4435.0 2022.0
Eif3a 3552.0 739.0
Eif3b 3353.0 -1965.0
Eif3c 3576.0 -1138.0
Eif3d 3308.0 -894.0
Eif3e 4230.0 3083.0
Eif3f 2064.0 -2807.0
Eif3g 3427.0 -1282.0
Eif3h 830.0 4152.0
Eif3i 3800.0 -1632.0
Eif3j2 2508.0 -3837.0
Eif3k 2040.0 2530.0
Eif4a1 1522.0 -3726.0
Eif4a2 2507.0 3604.0
Eif4b 4639.0 677.0
Eif4e -1341.0 -542.0
Eif4ebp1 4612.0 3878.0
Eif4g1 1298.0 1369.0
Eif4h 3551.0 -2504.0
Eif5 3578.0 2448.0
Eif5b 896.0 -2260.0
Etf1 60.0 2429.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rpn1 3667.0 532.0
Rpn2 3957.0 -1569.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Sec11a 977.0 502.0
Sec11c 3886.0 -4502.0
Sec61a1 -1711.0 3339.0
Sec61a2 583.0 -180.0
Sec61b 1520.0 -3616.0
Sec61g 613.0 -1478.0
Spcs1 1505.0 3097.0
Spcs2 3923.0 1819.0
Spcs3 600.0 -1395.0
Srp14 -74.0 -2322.0
Srp19 -1558.0 2614.0
Srp54a 850.0 -702.0
Srp68 1787.0 -708.0
Srp72 4312.0 516.0
Srp9 -507.0 -3107.0
Srprb -280.0 -2664.0
Ssr1 3149.0 1189.0
Ssr2 2453.0 788.0
Ssr3 2025.0 -2933.0
Ssr4 4275.0 1292.0
Tram1 -2520.0 48.0
Uba52 1296.0 738.0





REACTOME_GLYCOGEN_BREAKDOWN_GLYCOGENOLYSIS

REACTOME_GLYCOGEN_BREAKDOWN_GLYCOGENOLYSIS
metric value
setSize 11
pMANOVA 0.00425
p.adjustMANOVA 0.0578
s.dist 0.548
s.ctrl 0.516
s.Acss2KD -0.187
p.ctrl 0.00307
p.Acss2KD 0.284




Top 20 genes
Gene ctrl Acss2KD
Pygb 3960 -3020
Pgm1 2575 -2856
Phkg1 2402 -2475
Calm1 2353 -2149
Pygm 3970 -1118
Phkb 3330 -1074

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Agl -1256 -3066
Calm1 2353 -2149
Gyg 3468 2121
Pgm1 2575 -2856
Phka1 3464 1039
Phka2 907 2
Phkb 3330 -1074
Phkg1 2402 -2475
Phkg2 1727 2895
Pygb 3960 -3020
Pygm 3970 -1118





REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX

REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX
metric value
setSize 84
pMANOVA 2.9e-18
p.adjustMANOVA 1.49e-16
s.dist 0.547
s.ctrl 0.531
s.Acss2KD -0.128
p.ctrl 3.98e-17
p.Acss2KD 0.0423




Top 20 genes
Gene ctrl Acss2KD
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Rpl38 4075 -2266
Rpl36al 4092 -2051
Rpl19 4402 -1857
Rps25 4326 -1875
Rps7 3597 -2184

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Casc3 3280.0 -834.0
Eif4a3 1243.0 -4264.0
Eif4g1 1298.0 1369.0
Etf1 60.0 2429.0
Magoh -1006.0 -1392.0
Ncbp1 -949.0 421.0
Ncbp2 -146.0 -2230.0
Ppp2ca 2167.0 4308.0
Ppp2r1a -1610.0 -4003.0
Ppp2r2a -2629.0 -1140.0
Rnps1 2649.0 1465.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Smg1 -1326.0 4125.0
Smg5 15.0 -2620.0
Smg6 -2624.0 -3351.0
Smg7 -487.0 2650.0
Smg8 -2219.0 3854.0
Smg9 654.0 1772.0
Uba52 1296.0 738.0
Upf2 523.0 910.0
Upf3a -353.0 -150.0
Upf3b -1234.0 3676.0





REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE

REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE
metric value
setSize 38
pMANOVA 1e-07
p.adjustMANOVA 2.44e-06
s.dist 0.512
s.ctrl -0.496
s.Acss2KD 0.128
p.ctrl 1.25e-07
p.Acss2KD 0.172




Top 20 genes
Gene ctrl Acss2KD
Slc16a1 -3217 4488
Pdpr -3949 3401
Fh1 -3688 2783
Idh3b -3394 2629
Ogdh -3389 2604
Pdhb -2870 3037
Dld -2931 2747
Sucla2 -3523 1950
Sdhb -4362 1552
Pdha1 -3146 1714
Ldhb -4338 1221
Dlst -3144 1623
Suclg1 -3852 1041
Nnt -4248 797
Aco2 -1645 1948
Idh3a -3237 509
Idh3g -3533 173
Sdhd -3740 6

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Aco2 -1645 1948
Adhfe1 3212 -1601
Bsg 4237 578
Cs -3381 -821
D2hgdh 2362 -4378
Dlat -4402 -1582
Dld -2931 2747
Dlst -3144 1623
Fh1 -3688 2783
Idh1 4346 4023
Idh2 -4392 -344
Idh3a -3237 509
Idh3b -3394 2629
Idh3g -3533 173
L2hgdh -4284 -2139
Ldha 3361 -1615
Ldhb -4338 1221
Mdh2 -4028 -1792
Nnt -4248 797
Ogdh -3389 2604
Pdha1 -3146 1714
Pdhb -2870 3037
Pdhx -3449 -78
Pdk1 -4404 -57
Pdk2 -3105 -766
Pdk4 3721 4210
Pdp1 -2614 -4442
Pdp2 748 4336
Pdpr -3949 3401
Sdha -3787 -290
Sdhb -4362 1552
Sdhc -3581 -767
Sdhd -3740 6
Slc16a1 -3217 4488
Slc16a3 1223 -1989
Sucla2 -3523 1950
Suclg1 -3852 1041
Suclg2 -3306 -3226





REACTOME_ACTIVATION_OF_CHAPERONES_BY_ATF6_ALPHA

REACTOME_ACTIVATION_OF_CHAPERONES_BY_ATF6_ALPHA
metric value
setSize 11
pMANOVA 0.0193
p.adjustMANOVA 0.184
s.dist 0.483
s.ctrl -0.0157
s.Acss2KD 0.483
p.ctrl 0.928
p.Acss2KD 0.00554




Top 20 genes
Gene ctrl Acss2KD
Hsp90b1 -1354 4410
Ddit3 -1670 2698
Atf6 -452 2828
Mbtps1 -3005 202

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Atf4 1613 2918
Atf6 -452 2828
Calr 2185 1643
Ddit3 -1670 2698
Hsp90b1 -1354 4410
Hspa5 1069 3809
Mbtps1 -3005 202
Mbtps2 143 1315
Nfya 2642 1126
Nfyb -3366 -387
Xbp1 2192 3646





REACTOME_INFLUENZA_LIFE_CYCLE

REACTOME_INFLUENZA_LIFE_CYCLE
metric value
setSize 113
pMANOVA 6.91e-16
p.adjustMANOVA 2.9e-14
s.dist 0.444
s.ctrl 0.44
s.Acss2KD -0.0627
p.ctrl 7.87e-16
p.Acss2KD 0.251




Top 20 genes
Gene ctrl Acss2KD
Rpl12 4392 -3547
Rpl3 3866 -3717
Rpl24 4331 -3236
Rps27 4015 -3368
Seh1l 3268 -4127
Rps21 3981 -3337
Rps24 4124 -3163
Rpl15 4431 -2834
Rps9 4321 -2721
Rpl37 3604 -3055
Rps14 3836 -2815
Rplp0 4529 -2375
Rps8 2870 -3674
Rps20 3843 -2669
Rps26 3438 -2966
Rps4x 4410 -2262
Ran 3924 -2537
Rpl38 4075 -2266
Rpl36al 4092 -2051
Rpl19 4402 -1857

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Aaas 2061.0 -2934.0
Calr 2185.0 1643.0
Canx 1622.0 -1466.0
Clta 3021.0 1858.0
Cltc 3453.0 4563.0
Dnajc3 -237.0 -1762.0
Grsf1 -115.0 2623.0
Gtf2f1 4311.0 -1183.0
Gtf2f2 3129.0 256.0
Hsp90aa1 -3804.0 4242.0
Hspa1b -3953.0 4323.0
Ipo5 1577.0 2116.0
Kpna1 1171.0 397.0
Kpnb1 1586.0 -461.0
Nup107 1574.0 -2485.0
Nup133 388.0 3332.0
Nup153 2661.0 2185.0
Nup155 3328.0 -1449.0
Nup188 487.0 2122.0
Nup205 1370.0 -1113.0
Nup210 -2413.0 2428.0
Nup214 -1323.0 842.0
Nup35 -687.0 2336.0
Nup37 -3030.0 -73.0
Nup54 -4131.0 1644.0
Nup62 -1426.0 606.0
Nup85 2096.0 1671.0
Nup88 1960.0 558.0
Nup93 -82.0 1079.0
Nupl2 -2859.0 4306.0
Polr2a 4239.0 -873.0
Polr2b -343.0 2509.0
Polr2c 2894.0 616.0
Polr2d -602.0 -1600.0
Polr2e -49.0 176.0
Polr2f -3736.0 -3959.0
Polr2g 453.0 1638.0
Polr2h 1675.0 -2060.0
Polr2i 719.0 1808.0
Polr2j -987.0 -93.0
Polr2k -3021.0 -3287.0
Polr2l 937.0 -4440.0
Pom121 -1871.0 2474.0
Rae1 -646.0 -1389.0
Ran 3924.0 -2537.0
Ranbp2 1394.0 3575.0
Rpl10a 4258.0 851.0
Rpl11 737.0 -1926.0
Rpl12 4392.0 -3547.0
Rpl13 4151.0 -1595.0
Rpl14 4588.0 855.0
Rpl15 4431.0 -2834.0
Rpl18 3698.0 519.0
Rpl18a 3607.0 -90.0
Rpl19 4402.0 -1857.0
Rpl22 3078.0 3314.0
Rpl23 3362.0 -795.0
Rpl23a 3841.0 -128.0
Rpl24 4331.0 -3236.0
Rpl26 3889.0 1110.0
Rpl27-ps3 585.5 99.5
Rpl27a 3575.0 -313.0
Rpl28 3277.0 1701.0
Rpl29 1615.0 -3034.0
Rpl3 3866.0 -3717.0
Rpl30 2876.0 2153.0
Rpl32 4061.0 763.0
Rpl34 795.0 -347.0
Rpl35 3867.0 1099.0
Rpl36al 4092.0 -2051.0
Rpl37 3604.0 -3055.0
Rpl37a 1549.0 -739.0
Rpl38 4075.0 -2266.0
Rpl39 621.0 91.0
Rpl3l -1527.0 503.0
Rpl4 4583.0 2126.0
Rpl41 3258.0 118.0
Rpl5 2477.0 -274.0
Rpl6 4449.0 583.0
Rpl8 4498.0 -1411.0
Rplp0 4529.0 -2375.0
Rplp1 774.0 -1520.0
Rplp2 2412.0 -2316.0
Rps11 1663.0 -3764.0
Rps13 3015.0 2086.0
Rps14 3836.0 -2815.0
Rps15a 3088.0 -125.0
Rps16 4110.0 -301.0
Rps17 2325.0 319.0
Rps18 3501.0 -889.0
Rps19 4264.0 -190.0
Rps20 3843.0 -2669.0
Rps21 3981.0 -3337.0
Rps23 4232.0 -1084.0
Rps24 4124.0 -3163.0
Rps25 4326.0 -1875.0
Rps26 3438.0 -2966.0
Rps27 4015.0 -3368.0
Rps27a 2463.0 645.0
Rps29 2286.0 -2584.0
Rps3 4276.0 1036.0
Rps3a1 4505.0 -891.0
Rps4x 4410.0 -2262.0
Rps5 4148.0 2414.0
Rps6 3758.0 -1321.0
Rps7 3597.0 -2184.0
Rps8 2870.0 -3674.0
Rps9 4321.0 -2721.0
Rpsa 4244.0 273.0
Seh1l 3268.0 -4127.0
Tpr 1909.0 2246.0
Uba52 1296.0 738.0
Xpo1 -2462.0 489.0





REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS

REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS
metric value
setSize 11
pMANOVA 0.0621
p.adjustMANOVA 0.319
s.dist 0.436
s.ctrl 0.274
s.Acss2KD 0.338
p.ctrl 0.115
p.Acss2KD 0.052




Top 20 genes
Gene ctrl Acss2KD
Adss 4621 4520
Pfas 2845 4349
Atic 2122 3399
Impdh2 2993 1872
Adssl1 540 2058

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Adsl -3562 -773
Adss 4621 4520
Adssl1 540 2058
Atic 2122 3399
Gart -1906 2817
Gmps -1443 3981
Impdh1 2570 -1117
Impdh2 2993 1872
Paics 3725 -1432
Pfas 2845 4349
Ppat 2179 -2788





REACTOME_TRAF6_MEDIATED_NFKB_ACTIVATION

REACTOME_TRAF6_MEDIATED_NFKB_ACTIVATION
metric value
setSize 13
pMANOVA 0.0465
p.adjustMANOVA 0.276
s.dist 0.422
s.ctrl 0.277
s.Acss2KD 0.318
p.ctrl 0.0838
p.Acss2KD 0.0474




Top 20 genes
Gene ctrl Acss2KD
Nfkbia 4394 4408
Ikbkg 3459 3324
Traf2 3737 1474
Chuk 1289 3808
Map3k1 2354 592
Rela 394 2267
Nfkb2 217 42

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
App -2809 1169
Chuk 1289 3808
Ikbkb 3471 -2751
Ikbkg 3459 3324
Map3k1 2354 592
Mavs -3712 3968
Nfkb2 217 42
Nfkbia 4394 4408
Nfkbib 4397 -670
Rela 394 2267
Traf2 3737 1474
Traf6 -363 1778
Trim25 684 -697





REACTOME_EXTENSION_OF_TELOMERES

REACTOME_EXTENSION_OF_TELOMERES
metric value
setSize 13
pMANOVA 0.0206
p.adjustMANOVA 0.186
s.dist 0.418
s.ctrl 0.348
s.Acss2KD -0.232
p.ctrl 0.0298
p.Acss2KD 0.148




Top 20 genes
Gene ctrl Acss2KD
Dkc1 4115 -2679
Rfc4 4138 -2571
Pold4 3433 -2977
Ruvbl1 1492 -4110
Nhp2 286 -4106
Rpa2 1748 -227

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Dkc1 4115 -2679
Nhp2 286 -4106
Pcna 3132 1051
Pola2 -3521 185
Pold1 4589 2979
Pold2 -2657 70
Pold4 3433 -2977
Rfc2 3242 872
Rfc4 4138 -2571
Rpa1 4199 1131
Rpa2 1748 -227
Ruvbl1 1492 -4110
Ruvbl2 -2426 -3798





REACTOME_PYRUVATE_METABOLISM

REACTOME_PYRUVATE_METABOLISM
metric value
setSize 16
pMANOVA 0.0093
p.adjustMANOVA 0.116
s.dist 0.415
s.ctrl -0.357
s.Acss2KD 0.212
p.ctrl 0.0134
p.Acss2KD 0.143




Top 20 genes
Gene ctrl Acss2KD
Slc16a1 -3217 4488
Pdpr -3949 3401
Pdhb -2870 3037
Dld -2931 2747
Pdha1 -3146 1714
Ldhb -4338 1221

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Bsg 4237 578
Dlat -4402 -1582
Dld -2931 2747
Ldha 3361 -1615
Ldhb -4338 1221
Pdha1 -3146 1714
Pdhb -2870 3037
Pdhx -3449 -78
Pdk1 -4404 -57
Pdk2 -3105 -766
Pdk4 3721 4210
Pdp1 -2614 -4442
Pdp2 748 4336
Pdpr -3949 3401
Slc16a1 -3217 4488
Slc16a3 1223 -1989





REACTOME_SHC1_EVENTS_IN_ERBB4_SIGNALING

REACTOME_SHC1_EVENTS_IN_ERBB4_SIGNALING
metric value
setSize 13
pMANOVA 0.0241
p.adjustMANOVA 0.197
s.dist 0.41
s.ctrl 0.342
s.Acss2KD -0.226
p.ctrl 0.0329
p.Acss2KD 0.158




Top 20 genes
Gene ctrl Acss2KD
Map2k2 3542 -4337
Map2k1 2978 -3334
Shc1 2888 -3311
Ywhab 3629 -2108
Grb2 2454 -474

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Grb2 2454 -474
Hbegf 4553 4543
Hras -248 -3984
Kras -3480 -453
Map2k1 2978 -3334
Map2k2 3542 -4337
Mapk1 1017 639
Mapk3 1658 1988
Nras -1199 -2227
Raf1 -20 -1469
Shc1 2888 -3311
Sos1 3617 689
Ywhab 3629 -2108





REACTOME_SHC_MEDIATED_SIGNALLING

REACTOME_SHC_MEDIATED_SIGNALLING
metric value
setSize 13
pMANOVA 0.0244
p.adjustMANOVA 0.197
s.dist 0.409
s.ctrl 0.337
s.Acss2KD -0.232
p.ctrl 0.0357
p.Acss2KD 0.147




Top 20 genes
Gene ctrl Acss2KD
Map2k2 3542 -4337
Map2k1 2978 -3334
Shc1 2888 -3311
Ywhab 3629 -2108
Grb2 2454 -474

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Grb2 2454 -474
Hras -248 -3984
Kras -3480 -453
Map2k1 2978 -3334
Map2k2 3542 -4337
Mapk1 1017 639
Mapk3 1658 1988
Nras -1199 -2227
Raf1 -20 -1469
Shc1 2888 -3311
Shc2 4235 4183
Sos1 3617 689
Ywhab 3629 -2108





REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS

REACTOME_O_LINKED_GLYCOSYLATION_OF_MUCINS
metric value
setSize 10
pMANOVA 0.116
p.adjustMANOVA 0.424
s.dist 0.402
s.ctrl -0.32
s.Acss2KD -0.244
p.ctrl 0.0802
p.Acss2KD 0.181




Top 20 genes
Gene ctrl Acss2KD
B4galt5 -4290 -4293
St3gal1 -4016 -3710
Galnt10 -2092 -4490
St3gal3 -2132 -2725
Galnt1 -1984 -1967

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
B4galt5 -4290 -4293
C1galt1 -2299 259
C1galt1c1 2738 -173
Galnt1 -1984 -1967
Galnt10 -2092 -4490
Galnt11 -663 3160
St3gal1 -4016 -3710
St3gal2 4373 1719
St3gal3 -2132 -2725
St6galnac4 -3626 745





REACTOME_INHIBITION_OF_THE_PROTEOLYTIC_ACTIVITY_OF_APC_C_REQUIRED_FOR_THE_ONSET_OF_ANAPHASE_BY_MITOTIC_SPINDLE_CHECKPOINT_COMPONENTS

REACTOME_INHIBITION_OF_THE_PROTEOLYTIC_ACTIVITY_OF_APC_C_REQUIRED_FOR_THE_ONSET_OF_ANAPHASE_BY_MITOTIC_SPINDLE_CHECKPOINT_COMPONENTS
metric value
setSize 15
pMANOVA 0.02
p.adjustMANOVA 0.184
s.dist 0.392
s.ctrl 0.199
s.Acss2KD -0.338
p.ctrl 0.182
p.Acss2KD 0.0235




Top 20 genes
Gene ctrl Acss2KD
Anapc4 3163 -3834
Ube2e1 4546 -2044
Bub3 3562 -1342
Anapc2 1956 -2124
Anapc5 3342 -1132
Anapc11 718 -2850

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Anapc1 3012 1579
Anapc10 665 318
Anapc11 718 -2850
Anapc2 1956 -2124
Anapc4 3163 -3834
Anapc5 3342 -1132
Anapc7 -277 -1218
Bub3 3562 -1342
Cdc16 -3530 586
Cdc23 -2917 -4053
Cdc26 -992 -2007
Cdc27 -2236 -2032
Ube2c 3977 492
Ube2d1 -163 -4001
Ube2e1 4546 -2044





REACTOME_METABOLISM_OF_POLYAMINES

REACTOME_METABOLISM_OF_POLYAMINES
metric value
setSize 12
pMANOVA 0.081
p.adjustMANOVA 0.363
s.dist 0.391
s.ctrl 0.354
s.Acss2KD 0.164
p.ctrl 0.0336
p.Acss2KD 0.325




Top 20 genes
Gene ctrl Acss2KD
Sms 4491 4114
Odc1 4597 3477
Sat1 3846 3158
Srm 3067 1982
Enoph1 550 2097

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Adi1 4183 -3579
Amd1 151 -4576
Apip -635 -974
Enoph1 550 2097
Got1 -4127 4055
Mri1 -165 2852
Mtap 2716 -3083
Odc1 4597 3477
Sat1 3846 3158
Smox 1766 -738
Sms 4491 4114
Srm 3067 1982





REACTOME_DNA_STRAND_ELONGATION

REACTOME_DNA_STRAND_ELONGATION
metric value
setSize 12
pMANOVA 0.0704
p.adjustMANOVA 0.336
s.dist 0.39
s.ctrl 0.384
s.Acss2KD 0.0721
p.ctrl 0.0215
p.Acss2KD 0.666




Top 20 genes
Gene ctrl Acss2KD
Pold1 4589 2979
Rpa1 4199 1131
Pcna 3132 1051
Rfc2 3242 872
Mcm2 3829 490

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Gins4 -2982 2940
Mcm2 3829 490
Mcm7 2895 -237
Pcna 3132 1051
Pola2 -3521 185
Pold1 4589 2979
Pold2 -2657 70
Pold4 3433 -2977
Rfc2 3242 872
Rfc4 4138 -2571
Rpa1 4199 1131
Rpa2 1748 -227





REACTOME_PHOSPHORYLATION_OF_THE_APC_C

REACTOME_PHOSPHORYLATION_OF_THE_APC_C
metric value
setSize 14
pMANOVA 0.0358
p.adjustMANOVA 0.239
s.dist 0.377
s.ctrl 0.159
s.Acss2KD -0.341
p.ctrl 0.303
p.Acss2KD 0.027




Top 20 genes
Gene ctrl Acss2KD
Anapc4 3163 -3834
Ube2e1 4546 -2044
Anapc2 1956 -2124
Anapc5 3342 -1132
Anapc11 718 -2850

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Anapc1 3012 1579
Anapc10 665 318
Anapc11 718 -2850
Anapc2 1956 -2124
Anapc4 3163 -3834
Anapc5 3342 -1132
Anapc7 -277 -1218
Cdc16 -3530 586
Cdc23 -2917 -4053
Cdc26 -992 -2007
Cdc27 -2236 -2032
Ube2c 3977 492
Ube2d1 -163 -4001
Ube2e1 4546 -2044





REACTOME_CTNNB1_PHOSPHORYLATION_CASCADE

REACTOME_CTNNB1_PHOSPHORYLATION_CASCADE
metric value
setSize 14
pMANOVA 0.0717
p.adjustMANOVA 0.337
s.dist 0.377
s.ctrl -0.281
s.Acss2KD -0.251
p.ctrl 0.0686
p.Acss2KD 0.105




Top 20 genes
Gene ctrl Acss2KD
Ppp2r5e -3584 -3626
Ppp2r5b -3191 -2773
Ppp2r1a -1610 -4003
Frat2 -2346 -2728
Ppp2r5a -1142 -3165
Ppp2r5d -3494 -528
Ppp2cb -971 -1129

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Apc -3157 950
Axin1 230 -2739
Csnk1a1 -292 933
Ctnnb1 -1916 593
Frat2 -2346 -2728
Ppp2ca 2167 4308
Ppp2cb -971 -1129
Ppp2r1a -1610 -4003
Ppp2r1b 4296 -3027
Ppp2r5a -1142 -3165
Ppp2r5b -3191 -2773
Ppp2r5c -2097 473
Ppp2r5d -3494 -528
Ppp2r5e -3584 -3626





REACTOME_COLLAGEN_FORMATION

REACTOME_COLLAGEN_FORMATION
metric value
setSize 26
pMANOVA 0.00268
p.adjustMANOVA 0.0395
s.dist 0.374
s.ctrl -0.106
s.Acss2KD 0.358
p.ctrl 0.348
p.Acss2KD 0.00157




Top 20 genes
Gene ctrl Acss2KD
Col6a1 -4250 2642
Col22a1 -3149 3506
Col6a3 -2636 3439
Col4a1 -1740 4372
Bmp1 -1687 3717
Serpinh1 -816 4009
Col6a2 -3653 832
Col5a2 -648 3204
Pcolce -543 2233
Col4a2 -246 4244
Pcolce2 -227 2965
Plod1 -56 2798

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Adamts2 3671 3048
Bmp1 -1687 3717
Col11a2 -1863 -3081
Col14a1 1819 4380
Col15a1 225 1997
Col1a1 1664 2200
Col1a2 1968 2611
Col22a1 -3149 3506
Col24a1 -1845 -24
Col3a1 194 556
Col4a1 -1740 4372
Col4a2 -246 4244
Col5a1 328 486
Col5a2 -648 3204
Col5a3 -1123 -2247
Col6a1 -4250 2642
Col6a2 -3653 832
Col6a3 -2636 3439
Col7a1 3757 -1509
P4hb 250 142
Pcolce -543 2233
Pcolce2 -227 2965
Plod1 -56 2798
Plod3 -1548 -837
Ppib 1319 -3463
Serpinh1 -816 4009





REACTOME_HS_GAG_DEGRADATION

REACTOME_HS_GAG_DEGRADATION
metric value
setSize 10
pMANOVA 0.0905
p.adjustMANOVA 0.377
s.dist 0.374
s.ctrl -0.273
s.Acss2KD 0.255
p.ctrl 0.136
p.Acss2KD 0.162




Top 20 genes
Gene ctrl Acss2KD
Hspg2 -4014 4381
Sdc2 -2993 2423
Idua -1310 4340
Ids -659 2475

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Agrn 2153 4136
Gpc1 -366 -2222
Gpc4 -2811 -4165
Gusb -3976 -1163
Hspg2 -4014 4381
Ids -659 2475
Idua -1310 4340
Sdc2 -2993 2423
Sdc3 1854 -3087
Sdc4 290 4407





REACTOME_METAL_ION_SLC_TRANSPORTERS

REACTOME_METAL_ION_SLC_TRANSPORTERS
metric value
setSize 12
pMANOVA 0.082
p.adjustMANOVA 0.364
s.dist 0.371
s.ctrl 0.00587
s.Acss2KD 0.371
p.ctrl 0.972
p.Acss2KD 0.0263




Top 20 genes
Gene ctrl Acss2KD
Slc30a1 3090 3891
Slc30a5 2732 3679
Slc30a2 3538 1469
Slc31a1 1040 3396

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Cp -1719 1794
Slc30a1 3090 3891
Slc30a2 3538 1469
Slc30a5 2732 3679
Slc30a7 -1138 3220
Slc31a1 1040 3396
Slc39a1 -2489 -3123
Slc39a10 -1122 4425
Slc39a3 2227 -1847
Slc39a7 2730 -410
Slc40a1 -3560 3012
Slc41a1 -4141 683





REACTOME_SHC1_EVENTS_IN_EGFR_SIGNALING

REACTOME_SHC1_EVENTS_IN_EGFR_SIGNALING
metric value
setSize 14
pMANOVA 0.0384
p.adjustMANOVA 0.247
s.dist 0.369
s.ctrl 0.214
s.Acss2KD -0.3
p.ctrl 0.165
p.Acss2KD 0.0518




Top 20 genes
Gene ctrl Acss2KD
Map2k2 3542 -4337
Map2k1 2978 -3334
Shc1 2888 -3311
Ywhab 3629 -2108
Grb2 2454 -474

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Egf -753 -4618
Egfr -1274 3330
Grb2 2454 -474
Hras -248 -3984
Kras -3480 -453
Map2k1 2978 -3334
Map2k2 3542 -4337
Mapk1 1017 639
Mapk3 1658 1988
Nras -1199 -2227
Raf1 -20 -1469
Shc1 2888 -3311
Sos1 3617 689
Ywhab 3629 -2108





REACTOME_SHC_RELATED_EVENTS

REACTOME_SHC_RELATED_EVENTS
metric value
setSize 14
pMANOVA 0.041
p.adjustMANOVA 0.255
s.dist 0.369
s.ctrl 0.332
s.Acss2KD -0.161
p.ctrl 0.0317
p.Acss2KD 0.298




Top 20 genes
Gene ctrl Acss2KD
Map2k2 3542 -4337
Map2k1 2978 -3334
Shc1 2888 -3311
Ywhab 3629 -2108
Grb2 2454 -474

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Grb2 2454 -474
Hras -248 -3984
Insr 1313 3529
Kras -3480 -453
Map2k1 2978 -3334
Map2k2 3542 -4337
Mapk1 1017 639
Mapk3 1658 1988
Nras -1199 -2227
Raf1 -20 -1469
Shc1 2888 -3311
Shc2 4235 4183
Sos1 3617 689
Ywhab 3629 -2108





REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS

REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS
metric value
setSize 13
pMANOVA 0.0517
p.adjustMANOVA 0.295
s.dist 0.366
s.ctrl -0.191
s.Acss2KD 0.313
p.ctrl 0.234
p.Acss2KD 0.0511




Top 20 genes
Gene ctrl Acss2KD
Hspg2 -4014 4381
Sdc2 -2993 2423
Dcn -1776 4020
Gxylt1 -1647 53

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Agrn 2153 4136
B3gat3 408 3424
B4galt7 -2085 -710
Bgn 249 3317
Dcn -1776 4020
Gpc1 -366 -2222
Gpc4 -2811 -4165
Gxylt1 -1647 53
Hspg2 -4014 4381
Sdc2 -2993 2423
Sdc3 1854 -3087
Sdc4 290 4407
Vcan 257 2422





REACTOME_PLATELET_SENSITIZATION_BY_LDL

REACTOME_PLATELET_SENSITIZATION_BY_LDL
metric value
setSize 11
pMANOVA 0.143
p.adjustMANOVA 0.458
s.dist 0.365
s.ctrl -0.255
s.Acss2KD -0.261
p.ctrl 0.143
p.Acss2KD 0.134




Top 20 genes
Gene ctrl Acss2KD
Ppp2r5e -3584 -3626
Ppp2r5b -3191 -2773
Ppp2r1a -1610 -4003
Ppp2r5a -1142 -3165
Mapk14 -1328 -1405
Ppp2r5d -3494 -528
Ppp2cb -971 -1129

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Mapk14 -1328 -1405
Pecam1 -1180 1411
Ppp2ca 2167 4308
Ppp2cb -971 -1129
Ppp2r1a -1610 -4003
Ppp2r1b 4296 -3027
Ppp2r5a -1142 -3165
Ppp2r5b -3191 -2773
Ppp2r5c -2097 473
Ppp2r5d -3494 -528
Ppp2r5e -3584 -3626





REACTOME_CELL_CELL_JUNCTION_ORGANIZATION

REACTOME_CELL_CELL_JUNCTION_ORGANIZATION
metric value
setSize 15
pMANOVA 0.0739
p.adjustMANOVA 0.337
s.dist 0.36
s.ctrl -0.208
s.Acss2KD -0.294
p.ctrl 0.163
p.Acss2KD 0.0487




Top 20 genes
Gene ctrl Acss2KD
Cdh5 -4105 -4132
Cdh4 -3165 -3993
F11r -2571 -4050
Cldn5 -2895 -3389
Jup -3727 -2465
Pard6a -3040 -2699
Pvr -2059 -3071
Cdh13 -1040 -2092
Cdh15 -765 -18

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Cadm1 4265 -1651
Cdh13 -1040 -2092
Cdh15 -765 -18
Cdh4 -3165 -3993
Cdh5 -4105 -4132
Cldn12 4069 4324
Cldn5 -2895 -3389
Ctnna1 3442 -3921
Ctnnb1 -1916 593
F11r -2571 -4050
Jup -3727 -2465
Pard3 -1632 3398
Pard6a -3040 -2699
Prkci 1837 2521
Pvr -2059 -3071





REACTOME_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A

REACTOME_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A
metric value
setSize 17
pMANOVA 0.0242
p.adjustMANOVA 0.197
s.dist 0.357
s.ctrl 0.222
s.Acss2KD -0.28
p.ctrl 0.113
p.Acss2KD 0.0458




Top 20 genes
Gene ctrl Acss2KD
Anapc4 3163 -3834
Ube2e1 4546 -2044
Bub3 3562 -1342
Anapc2 1956 -2124
Anapc5 3342 -1132
Anapc11 718 -2850

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Anapc1 3012 1579
Anapc10 665 318
Anapc11 718 -2850
Anapc2 1956 -2124
Anapc4 3163 -3834
Anapc5 3342 -1132
Anapc7 -277 -1218
Bub3 3562 -1342
Cdc16 -3530 586
Cdc23 -2917 -4053
Cdc26 -992 -2007
Cdc27 -2236 -2032
Rps27a 2463 645
Uba52 1296 738
Ube2c 3977 492
Ube2d1 -163 -4001
Ube2e1 4546 -2044





REACTOME_MRNA_SPLICING

REACTOME_MRNA_SPLICING
metric value
setSize 98
pMANOVA 9.57e-09
p.adjustMANOVA 2.6e-07
s.dist 0.356
s.ctrl 0.355
s.Acss2KD 0.0247
p.ctrl 1.31e-09
p.Acss2KD 0.673




Top 20 genes
Gene ctrl Acss2KD
Sf3b1 4635 4565
Hnrnpa1 4482 4277
Srsf11 4364 4233
Srsf6 4379 4043
Dhx38 4459 3281
Srsf2 3950 2962
Hnrnpc 3222 3608
Pcbp2 3541 3156
Srrm1 2405 4344
Cstf1 3691 2779
Cdc40 4428 2160
Srsf7 4315 2214
Hnrnph2 2528 3302
Ccar1 3177 2236
Cpsf1 2114 2871
Hnrnph1 1338 4274
Srsf3 2854 1989
Hnrnpa2b1 2633 2107
Eftud2 2455 1992
Txnl4a 1087 4076

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Ccar1 3177 2236
Cd2bp2 1074 -2774
Cdc40 4428 2160
Cpsf1 2114 2871
Cpsf2 -2327 -2615
Cpsf3 -1524 -2250
Cpsf7 4470 -2572
Cstf1 3691 2779
Cstf2 -2390 -1005
Cstf3 -1765 911
Ddx23 157 -3679
Dhx38 4459 3281
Dhx9 545 1775
Dnajc8 -2189 2115
Eftud2 2455 1992
Fus 1053 -169
Gtf2f1 4311 -1183
Gtf2f2 3129 256
Hnrnpa0 1786 -4123
Hnrnpa1 4482 4277
Hnrnpa2b1 2633 2107
Hnrnpa3 410 3304
Hnrnpc 3222 3608
Hnrnpd 4209 -3383
Hnrnpf 3598 968
Hnrnph1 1338 4274
Hnrnph2 2528 3302
Hnrnpk 2139 -2569
Hnrnpl 906 1447
Hnrnpm 4367 -311
Hnrnpr 1332 -1824
Hnrnpu 2786 1020
Hnrnpul1 1972 -2099
Magoh -1006 -1392
Ncbp1 -949 421
Ncbp2 -146 -2230
Nfx1 3075 -3286
Nudt21 -2366 -1492
Papola -4128 2805
Pcbp1 1888 -2780
Pcbp2 3541 3156
Pcf11 -1732 2816
Phf5a 3877 -1907
Polr2a 4239 -873
Polr2b -343 2509
Polr2c 2894 616
Polr2d -602 -1600
Polr2e -49 176
Polr2f -3736 -3959
Polr2g 453 1638
Polr2h 1675 -2060
Polr2i 719 1808
Polr2j -987 -93
Polr2k -3021 -3287
Polr2l 937 -4440
Prpf4 2521 -664
Prpf6 3956 -696
Prpf8 1779 -883
Ptbp1 4204 -2434
Rbm5 3223 -166
Rnps1 2649 1465
Sf3a1 2221 1278
Sf3a2 -428 -4487
Sf3a3 3614 -1867
Sf3b1 4635 4565
Sf3b2 4095 -3323
Sf3b3 2543 1543
Sf3b4 4310 -3360
Sf3b5 2622 -1416
Smc1a 3522 -755
Snrnp200 2425 1709
Snrnp40 593 -2830
Snrnp70 4594 814
Snrpa -1407 2166
Snrpa1 3637 1158
Snrpb 1610 -3967
Snrpb2 2971 -3259
Snrpd1 3664 37
Snrpd2 -116 -341
Snrpd3 -2304 3571
Snrpe 396 -3169
Snrpf 1191 -2494
Srrm1 2405 4344
Srsf1 2134 2000
Srsf11 4364 4233
Srsf2 3950 2962
Srsf3 2854 1989
Srsf4 -2415 -4369
Srsf5 4586 -1356
Srsf6 4379 4043
Srsf7 4315 2214
Srsf9 1326 2676
Sugp1 504 -546
Txnl4a 1087 4076
U2af1 1176 3716
U2af2 3544 -1850
Upf3b -1234 3676
Ybx1 3337 -1879





REACTOME_NCAM1_INTERACTIONS

REACTOME_NCAM1_INTERACTIONS
metric value
setSize 16
pMANOVA 0.0393
p.adjustMANOVA 0.249
s.dist 0.346
s.ctrl -0.162
s.Acss2KD 0.306
p.ctrl 0.261
p.Acss2KD 0.0342




Top 20 genes
Gene ctrl Acss2KD
Col6a1 -4250 2642
Col6a3 -2636 3439
Col4a1 -1740 4372
Col6a2 -3653 832
Col5a2 -648 3204
Col4a2 -246 4244

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Agrn 2153 4136
Cacna1s 3871 2767
Cacnb1 -2334 -4616
Col1a1 1664 2200
Col1a2 1968 2611
Col3a1 194 556
Col4a1 -1740 4372
Col4a2 -246 4244
Col5a1 328 486
Col5a2 -648 3204
Col6a1 -4250 2642
Col6a2 -3653 832
Col6a3 -2636 3439
Gfra1 -950 -635
Nrtn -3034 -3735
Prnp -1479 -349





REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS

REACTOME_TRAFFICKING_OF_AMPA_RECEPTORS
metric value
setSize 16
pMANOVA 0.0703
p.adjustMANOVA 0.336
s.dist 0.345
s.ctrl -0.124
s.Acss2KD -0.322
p.ctrl 0.392
p.Acss2KD 0.0256




Top 20 genes
Gene ctrl Acss2KD
Myo6 -3357 -2025
Pick1 -3368 -1913
Ap2s1 -2667 -1973
Prkca -2598 -1826
Nsf -1828 -1339
Mdm2 -147 -1540

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Ap2a1 1533 -3553
Ap2a2 413 -3049
Ap2b1 -3697 45
Ap2m1 -2176 3863
Ap2s1 -2667 -1973
Camk2a 1101 -2731
Camk2b 3004 -1397
Camk2d 1539 591
Dlg1 1050 444
Epb41l1 2501 -3371
Grip2 746 -4331
Mdm2 -147 -1540
Myo6 -3357 -2025
Nsf -1828 -1339
Pick1 -3368 -1913
Prkca -2598 -1826





REACTOME_SIGNALLING_TO_P38_VIA_RIT_AND_RIN

REACTOME_SIGNALLING_TO_P38_VIA_RIT_AND_RIN
metric value
setSize 11
pMANOVA 0.113
p.adjustMANOVA 0.424
s.dist 0.344
s.ctrl 0.137
s.Acss2KD -0.316
p.ctrl 0.433
p.Acss2KD 0.0696




Top 20 genes
Gene ctrl Acss2KD
Map2k2 3542 -4337
Map2k1 2978 -3334
Ywhab 3629 -2108

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Braf -11 -382
Hras -248 -3984
Kras -3480 -453
Map2k1 2978 -3334
Map2k2 3542 -4337
Mapk1 1017 639
Mapk3 1658 1988
Nras -1199 -2227
Raf1 -20 -1469
Rit1 -151 -591
Ywhab 3629 -2108





REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT

REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT
metric value
setSize 21
pMANOVA 0.0174
p.adjustMANOVA 0.175
s.dist 0.341
s.ctrl 0.318
s.Acss2KD -0.124
p.ctrl 0.0117
p.Acss2KD 0.327




Top 20 genes
Gene ctrl Acss2KD
Chmp6 3716 -2921
Vps25 2710 -3313
Chmp2a 3959 -2171
Chmp2b 1940 -3567
Vta1 2430 -2156
Chmp4b 1109 -4244
Vps37a 1310 -2089
Chmp3 1330 -669
Vps4a 2762 -221
Chmp5 3741 -66

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Chmp2a 3959 -2171
Chmp2b 1940 -3567
Chmp3 1330 -669
Chmp4b 1109 -4244
Chmp5 3741 -66
Chmp6 3716 -2921
Chmp7 -172 -2881
Hgs 3331 3866
Rps27a 2463 645
Snf8 -1830 -4355
Stam 153 1013
Stam2 1339 3597
Tsg101 207 3382
Uba52 1296 738
Vps25 2710 -3313
Vps36 1821 1073
Vps37a 1310 -2089
Vps37c 1001 3427
Vps4a 2762 -221
Vps4b -2396 -1513
Vta1 2430 -2156





REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS

REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS
metric value
setSize 24
pMANOVA 0.0133
p.adjustMANOVA 0.15
s.dist 0.341
s.ctrl -0.0228
s.Acss2KD 0.34
p.ctrl 0.847
p.Acss2KD 0.00393




Top 20 genes
Gene ctrl Acss2KD
Slc16a1 -3217 4488
Slc40a1 -3560 3012
Slc47a1 -2112 3903
Slc2a12 -2211 3065
Slc39a10 -1122 4425
Slc2a4 -1773 2466
Slc30a7 -1138 3220
Cp -1719 1794
Slc41a1 -4141 683
Slc2a1 -404 3291

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Cp -1719 1794
Slc16a1 -3217 4488
Slc16a3 1223 -1989
Slc22a5 3998 3126
Slc2a1 -404 3291
Slc2a12 -2211 3065
Slc2a3 3636 2579
Slc2a4 -1773 2466
Slc2a8 3311 406
Slc30a1 3090 3891
Slc30a2 3538 1469
Slc30a5 2732 3679
Slc30a7 -1138 3220
Slc31a1 1040 3396
Slc39a1 -2489 -3123
Slc39a10 -1122 4425
Slc39a3 2227 -1847
Slc39a7 2730 -410
Slc40a1 -3560 3012
Slc41a1 -4141 683
Slc44a1 379 2551
Slc44a2 -274 -4134
Slc47a1 -2112 3903
Slc6a6 -4527 -2952





REACTOME_INSULIN_RECEPTOR_RECYCLING

REACTOME_INSULIN_RECEPTOR_RECYCLING
metric value
setSize 15
pMANOVA 0.098
p.adjustMANOVA 0.394
s.dist 0.339
s.ctrl 0.174
s.Acss2KD 0.291
p.ctrl 0.244
p.Acss2KD 0.0512




Top 20 genes
Gene ctrl Acss2KD
Atp6v1b2 3911 4522
Atp6v1h 1974 4119
Atp6v0e 3511 1487
Atp6v0d1 1179 4073
Insr 1313 3529
Atp6v1g1 4328 585
Atp6v0b 1716 1113
Atp6v1e1 2416 663

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Atp6v0a2 -548 -2378
Atp6v0b 1716 1113
Atp6v0c 3772 -2383
Atp6v0d1 1179 4073
Atp6v0e 3511 1487
Atp6v1a -3458 3741
Atp6v1b2 3911 4522
Atp6v1c1 -2944 2244
Atp6v1d -2298 -2151
Atp6v1e1 2416 663
Atp6v1f -2137 2559
Atp6v1g1 4328 585
Atp6v1h 1974 4119
Insr 1313 3529
Tcirg1 333 -1991





REACTOME_GLUCONEOGENESIS

REACTOME_GLUCONEOGENESIS
metric value
setSize 19
pMANOVA 0.0503
p.adjustMANOVA 0.29
s.dist 0.337
s.ctrl -0.127
s.Acss2KD -0.312
p.ctrl 0.337
p.Acss2KD 0.0185




Top 20 genes
Gene ctrl Acss2KD
Slc25a11 -4064 -2610
Pck1 -2329 -4296
Pgam2 -2769 -3600
Mdh2 -4028 -1792
Prkaca -1333 -2994
Tpi1 -828 -2975
Slc25a12 -1601 -175

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Eno1 3022 -3814
Eno3 1752 -1167
Fbp2 1951 -979
Got1 -4127 4055
Got2 -3934 3036
Gpi1 4426 877
Mdh1 -4331 2245
Mdh2 -4028 -1792
Pck1 -2329 -4296
Pcx 4350 -3810
Pfkfb1 497 -181
Pgam1 1448 -2789
Pgam2 -2769 -3600
Pgk1 832 -2438
Prkaca -1333 -2994
Prkacb 1320 -4312
Slc25a11 -4064 -2610
Slc25a12 -1601 -175
Tpi1 -828 -2975





REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B

REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B
metric value
setSize 16
pMANOVA 0.045
p.adjustMANOVA 0.27
s.dist 0.337
s.ctrl 0.188
s.Acss2KD -0.279
p.ctrl 0.192
p.Acss2KD 0.0531




Top 20 genes
Gene ctrl Acss2KD
Anapc4 3163 -3834
Ube2e1 4546 -2044
Anapc2 1956 -2124
Anapc5 3342 -1132
Anapc11 718 -2850

Click HERE to show all gene set members

All member genes
ctrl Acss2KD
Anapc1 3012 1579
Anapc10 665 318
Anapc11 718 -2850
Anapc2 1956 -2124
Anapc4 3163 -3834
Anapc5 3342 -1132
Anapc7 -277 -1218
Cdc16 -3530 586
Cdc23 -2917 -4053
Cdc26 -992 -2007
Cdc27 -2236 -2032
Rps27a 2463 645
Uba52 1296 738
Ube2c 3977 492
Ube2d1 -163 -4001
Ube2e1 4546 -2044





Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.2.1 (2022-06-23)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 22.04.1 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
## LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats4    stats     graphics  grDevices utils     datasets  methods  
## [8] base     
## 
## other attached packages:
##  [1] plyr_1.8.7                  pkgload_1.3.0              
##  [3] GGally_2.1.2                gtools_3.9.2.2             
##  [5] echarts4r_0.4.4             beeswarm_0.4.0             
##  [7] vioplot_0.3.7               sm_2.2-5.7                 
##  [9] kableExtra_1.3.4            topconfects_1.12.0         
## [11] limma_3.52.1                eulerr_6.1.1               
## [13] mitch_1.8.0                 MASS_7.3-58                
## [15] fgsea_1.22.0                gplots_3.1.3               
## [17] DESeq2_1.36.0               SummarizedExperiment_1.26.1
## [19] Biobase_2.56.0              MatrixGenerics_1.8.0       
## [21] matrixStats_0.62.0          GenomicRanges_1.48.0       
## [23] GenomeInfoDb_1.32.2         IRanges_2.30.0             
## [25] S4Vectors_0.34.0            BiocGenerics_0.42.0        
## [27] reshape2_1.4.4              forcats_0.5.1              
## [29] stringr_1.4.0               dplyr_1.0.9                
## [31] purrr_0.3.4                 readr_2.1.2                
## [33] tidyr_1.2.0                 tibble_3.1.7               
## [35] ggplot2_3.3.6               tidyverse_1.3.1            
## [37] zoo_1.8-10                 
## 
## loaded via a namespace (and not attached):
##   [1] readxl_1.4.0           backports_1.4.1        fastmatch_1.1-3       
##   [4] systemfonts_1.0.4      splines_4.2.1          BiocParallel_1.30.3   
##   [7] digest_0.6.29          htmltools_0.5.2        fansi_1.0.3           
##  [10] magrittr_2.0.3         memoise_2.0.1          tzdb_0.3.0            
##  [13] Biostrings_2.64.0      annotate_1.74.0        modelr_0.1.8          
##  [16] svglite_2.1.0          prettyunits_1.1.1      colorspace_2.0-3      
##  [19] blob_1.2.3             rvest_1.0.2            haven_2.5.0           
##  [22] xfun_0.31              crayon_1.5.1           RCurl_1.98-1.7        
##  [25] jsonlite_1.8.0         genefilter_1.78.0      survival_3.4-0        
##  [28] glue_1.6.2             gtable_0.3.0           zlibbioc_1.42.0       
##  [31] XVector_0.36.0         webshot_0.5.3          DelayedArray_0.22.0   
##  [34] scales_1.2.0           DBI_1.1.3              Rcpp_1.0.8.3          
##  [37] viridisLite_0.4.0      xtable_1.8-4           progress_1.2.2        
##  [40] bit_4.0.4              htmlwidgets_1.5.4      httr_1.4.3            
##  [43] RColorBrewer_1.1-3     ellipsis_0.3.2         pkgconfig_2.0.3       
##  [46] reshape_0.8.9          XML_3.99-0.10          farver_2.1.0          
##  [49] sass_0.4.1             dbplyr_2.2.1           locfit_1.5-9.5        
##  [52] utf8_1.2.2             tidyselect_1.1.2       labeling_0.4.2        
##  [55] rlang_1.0.3            later_1.3.0            AnnotationDbi_1.58.0  
##  [58] munsell_0.5.0          cellranger_1.1.0       tools_4.2.1           
##  [61] cachem_1.0.6           cli_3.3.0              generics_0.1.2        
##  [64] RSQLite_2.2.14         broom_0.8.0            evaluate_0.15         
##  [67] fastmap_1.1.0          yaml_2.3.5             knitr_1.39            
##  [70] bit64_4.0.5            fs_1.5.2               caTools_1.18.2        
##  [73] KEGGREST_1.36.2        mime_0.12              xml2_1.3.3            
##  [76] compiler_4.2.1         rstudioapi_0.13        png_0.1-7             
##  [79] reprex_2.0.1           geneplotter_1.74.0     bslib_0.3.1           
##  [82] stringi_1.7.6          highr_0.9              lattice_0.20-45       
##  [85] Matrix_1.4-1           vctrs_0.4.1            pillar_1.7.0          
##  [88] lifecycle_1.0.1        jquerylib_0.1.4        data.table_1.14.2     
##  [91] bitops_1.0-7           httpuv_1.6.5           R6_2.5.1              
##  [94] promises_1.2.0.1       KernSmooth_2.23-20     gridExtra_2.3         
##  [97] codetools_0.2-18       assertthat_0.2.1       withr_2.5.0           
## [100] GenomeInfoDbData_1.2.8 parallel_4.2.1         hms_1.1.1             
## [103] grid_4.2.1             rmarkdown_2.14         shiny_1.7.1           
## [106] lubridate_1.8.0

END of report