date generated: 2022-09-07

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                     stat
## 0610009B22Rik  0.3047981
## 0610009L18Rik -0.2679990
## 0610010K14Rik -0.7218075
## 0610012G03Rik -0.1786497
## 0610030E20Rik -0.4541127
## 0610040J01Rik -1.3376144
Here are some metrics about the input data profile:
Profile metrics
Profile metrics
num_genesets 674
num_genes_in_profile 9337
duplicated_genes_present 0
num_profile_genes_in_sets 2785
num_profile_genes_not_in_sets 6552

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: https://ziemann-lab.net/public/msigdb_mouse/reactome.v5.2.symbols_mouse.gmt
Gene sets metrics
Gene sets metrics
num_genesets 674
num_genesets_excluded 206
num_genesets_included 468

Differential pathway expression


Interactive enrichment scatterplot

Significance is calculated by -log10(p-value). All points shown are FDR<0.05.

Significance is calculated by -log10(p-value). Top N sets shown irrespective of FDR.

Results table

Top N= 50 gene sets
set setSize pANOVA s.dist p.adjustANOVA
REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS 11 4.16e-04 0.615 4.14e-03
REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES 40 2.02e-07 0.475 1.76e-05
REACTOME SCF BETA TRCP MEDIATED DEGRADATION OF EMI1 42 1.53e-07 0.468 1.76e-05
REACTOME CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6 40 3.58e-07 0.465 1.76e-05
REACTOME P53 INDEPENDENT G1 S DNA DAMAGE CHECKPOINT 42 3.49e-07 0.455 1.76e-05
REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1 42 3.77e-07 0.453 1.76e-05
REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX 45 2.84e-07 0.443 1.76e-05
REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC 43 8.27e-07 0.435 2.85e-05
REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC 14 4.91e-03 0.434 3.15e-02
REACTOME ER PHAGOSOME PATHWAY 48 2.10e-07 0.433 1.76e-05
REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G 42 1.26e-06 0.432 3.48e-05
REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI 13 6.97e-03 -0.432 3.98e-02
REACTOME VOLTAGE GATED POTASSIUM CHANNELS 10 2.34e-02 -0.414 9.95e-02
REACTOME ASSEMBLY OF THE PRE REPLICATIVE COMPLEX 48 9.23e-07 0.410 2.88e-05
REACTOME SIGNALING BY NOTCH4 11 1.89e-02 -0.409 8.34e-02
REACTOME ORC1 REMOVAL FROM CHROMATIN 49 9.92e-07 0.404 2.90e-05
REACTOME SIGNALING BY NOTCH3 11 2.08e-02 -0.403 9.03e-02
REACTOME SCFSKP2 MEDIATED DEGRADATION OF P27 P21 43 5.35e-06 0.401 1.25e-04
REACTOME ANTIGEN PROCESSING CROSS PRESENTATION 56 2.60e-07 0.398 1.76e-05
REACTOME CYTOSOLIC TRNA AMINOACYLATION 22 1.35e-03 0.395 1.15e-02
REACTOME AUTODEGRADATION OF CDH1 BY CDH1 APC C 53 6.93e-07 0.395 2.70e-05
REACTOME PEPTIDE LIGAND BINDING RECEPTORS 11 2.51e-02 -0.390 1.04e-01
REACTOME P53 DEPENDENT G1 DNA DAMAGE RESPONSE 46 6.23e-06 0.385 1.33e-04
REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1 56 6.29e-07 0.385 2.68e-05
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS 17 6.14e-03 -0.384 3.59e-02
REACTOME REGULATION OF MITOTIC CELL CYCLE 60 2.98e-07 0.383 1.76e-05
REACTOME NCAM1 INTERACTIONS 15 1.05e-02 0.382 5.58e-02
REACTOME APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINS 56 8.53e-07 0.381 2.85e-05
REACTOME POTASSIUM CHANNELS 22 2.59e-03 -0.371 1.86e-02
REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 45 1.74e-05 0.371 2.80e-04
REACTOME M G1 TRANSITION 51 4.89e-06 0.370 1.20e-04
REACTOME SIGNALING BY NOTCH2 11 3.54e-02 -0.366 1.36e-01
REACTOME REGULATION OF APOPTOSIS 48 1.39e-05 0.363 2.40e-04
REACTOME SEMA3A PAK DEPENDENT AXON REPULSION 10 4.74e-02 -0.362 1.65e-01
REACTOME ACTIVATION OF NF KAPPAB IN B CELLS 53 9.18e-06 0.353 1.72e-04
REACTOME NEGATIVE REGULATION OF FGFR SIGNALING 18 1.08e-02 -0.347 5.60e-02
REACTOME COMPLEMENT CASCADE 11 5.12e-02 0.340 1.75e-01
REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION 50 4.31e-05 0.335 6.50e-04
REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS 15 2.54e-02 -0.334 1.04e-01
REACTOME SYNTHESIS OF DNA 61 6.87e-06 0.333 1.40e-04
REACTOME GLUCOSE METABOLISM 43 1.74e-04 0.331 2.32e-03
REACTOME GPCR LIGAND BINDING 42 2.12e-04 -0.331 2.76e-03
REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS 20 1.08e-02 -0.330 5.60e-02
REACTOME TRANSPORT OF GLUCOSE AND OTHER SUGARS BILE SALTS AND ORGANIC ACIDS METAL IONS AND AMINE COMPOUNDS 24 5.38e-03 -0.328 3.32e-02
REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS 17 1.94e-02 -0.328 8.49e-02
REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR 11 6.09e-02 -0.326 1.93e-01
REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1 20 1.16e-02 -0.326 5.84e-02
REACTOME SIGNALING BY WNT 56 2.60e-05 0.325 4.06e-04
REACTOME GLUCONEOGENESIS 18 1.78e-02 0.323 8.24e-02
REACTOME SIGNAL AMPLIFICATION 15 3.25e-02 -0.319 1.27e-01


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pANOVA s.dist p.adjustANOVA
REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS 11 4.16e-04 0.615000 4.14e-03
REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES 40 2.02e-07 0.475000 1.76e-05
REACTOME SCF BETA TRCP MEDIATED DEGRADATION OF EMI1 42 1.53e-07 0.468000 1.76e-05
REACTOME CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6 40 3.58e-07 0.465000 1.76e-05
REACTOME P53 INDEPENDENT G1 S DNA DAMAGE CHECKPOINT 42 3.49e-07 0.455000 1.76e-05
REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1 42 3.77e-07 0.453000 1.76e-05
REACTOME CDT1 ASSOCIATION WITH THE CDC6 ORC ORIGIN COMPLEX 45 2.84e-07 0.443000 1.76e-05
REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC 43 8.27e-07 0.435000 2.85e-05
REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC 14 4.91e-03 0.434000 3.15e-02
REACTOME ER PHAGOSOME PATHWAY 48 2.10e-07 0.433000 1.76e-05
REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G 42 1.26e-06 0.432000 3.48e-05
REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI 13 6.97e-03 -0.432000 3.98e-02
REACTOME VOLTAGE GATED POTASSIUM CHANNELS 10 2.34e-02 -0.414000 9.95e-02
REACTOME ASSEMBLY OF THE PRE REPLICATIVE COMPLEX 48 9.23e-07 0.410000 2.88e-05
REACTOME SIGNALING BY NOTCH4 11 1.89e-02 -0.409000 8.34e-02
REACTOME ORC1 REMOVAL FROM CHROMATIN 49 9.92e-07 0.404000 2.90e-05
REACTOME SIGNALING BY NOTCH3 11 2.08e-02 -0.403000 9.03e-02
REACTOME SCFSKP2 MEDIATED DEGRADATION OF P27 P21 43 5.35e-06 0.401000 1.25e-04
REACTOME ANTIGEN PROCESSING CROSS PRESENTATION 56 2.60e-07 0.398000 1.76e-05
REACTOME CYTOSOLIC TRNA AMINOACYLATION 22 1.35e-03 0.395000 1.15e-02
REACTOME AUTODEGRADATION OF CDH1 BY CDH1 APC C 53 6.93e-07 0.395000 2.70e-05
REACTOME PEPTIDE LIGAND BINDING RECEPTORS 11 2.51e-02 -0.390000 1.04e-01
REACTOME P53 DEPENDENT G1 DNA DAMAGE RESPONSE 46 6.23e-06 0.385000 1.33e-04
REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1 56 6.29e-07 0.385000 2.68e-05
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS 17 6.14e-03 -0.384000 3.59e-02
REACTOME REGULATION OF MITOTIC CELL CYCLE 60 2.98e-07 0.383000 1.76e-05
REACTOME NCAM1 INTERACTIONS 15 1.05e-02 0.382000 5.58e-02
REACTOME APC C CDC20 MEDIATED DEGRADATION OF MITOTIC PROTEINS 56 8.53e-07 0.381000 2.85e-05
REACTOME POTASSIUM CHANNELS 22 2.59e-03 -0.371000 1.86e-02
REACTOME DESTABILIZATION OF MRNA BY AUF1 HNRNP D0 45 1.74e-05 0.371000 2.80e-04
REACTOME M G1 TRANSITION 51 4.89e-06 0.370000 1.20e-04
REACTOME SIGNALING BY NOTCH2 11 3.54e-02 -0.366000 1.36e-01
REACTOME REGULATION OF APOPTOSIS 48 1.39e-05 0.363000 2.40e-04
REACTOME SEMA3A PAK DEPENDENT AXON REPULSION 10 4.74e-02 -0.362000 1.65e-01
REACTOME ACTIVATION OF NF KAPPAB IN B CELLS 53 9.18e-06 0.353000 1.72e-04
REACTOME NEGATIVE REGULATION OF FGFR SIGNALING 18 1.08e-02 -0.347000 5.60e-02
REACTOME COMPLEMENT CASCADE 11 5.12e-02 0.340000 1.75e-01
REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION 50 4.31e-05 0.335000 6.50e-04
REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS 15 2.54e-02 -0.334000 1.04e-01
REACTOME SYNTHESIS OF DNA 61 6.87e-06 0.333000 1.40e-04
REACTOME GLUCOSE METABOLISM 43 1.74e-04 0.331000 2.32e-03
REACTOME GPCR LIGAND BINDING 42 2.12e-04 -0.331000 2.76e-03
REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS 20 1.08e-02 -0.330000 5.60e-02
REACTOME TRANSPORT OF GLUCOSE AND OTHER SUGARS BILE SALTS AND ORGANIC ACIDS METAL IONS AND AMINE COMPOUNDS 24 5.38e-03 -0.328000 3.32e-02
REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS 17 1.94e-02 -0.328000 8.49e-02
REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR 11 6.09e-02 -0.326000 1.93e-01
REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1 20 1.16e-02 -0.326000 5.84e-02
REACTOME SIGNALING BY WNT 56 2.60e-05 0.325000 4.06e-04
REACTOME GLUCONEOGENESIS 18 1.78e-02 0.323000 8.24e-02
REACTOME SIGNAL AMPLIFICATION 15 3.25e-02 -0.319000 1.27e-01
REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC 13 4.66e-02 0.319000 1.64e-01
REACTOME DOUBLE STRAND BREAK REPAIR 12 5.89e-02 0.315000 1.92e-01
REACTOME TRAF6 MEDIATED IRF7 ACTIVATION 12 5.93e-02 -0.315000 1.92e-01
REACTOME GLUCAGON TYPE LIGAND RECEPTORS 10 9.02e-02 -0.309000 2.51e-01
REACTOME NRAGE SIGNALS DEATH THROUGH JNK 27 5.69e-03 -0.308000 3.46e-02
REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE 13 5.52e-02 -0.307000 1.85e-01
REACTOME ADP SIGNALLING THROUGH P2RY12 10 9.61e-02 -0.304000 2.62e-01
REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY 11 8.15e-02 0.303000 2.35e-01
REACTOME HS GAG BIOSYNTHESIS 15 4.28e-02 -0.302000 1.57e-01
REACTOME G ALPHA I SIGNALLING EVENTS 29 5.03e-03 -0.301000 3.18e-02
REACTOME BASE EXCISION REPAIR 13 6.03e-02 0.301000 1.93e-01
REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX 11 8.43e-02 0.301000 2.41e-01
REACTOME TRNA AMINOACYLATION 39 1.30e-03 0.298000 1.13e-02
REACTOME SIGNAL ATTENUATION 10 1.05e-01 -0.296000 2.71e-01
REACTOME INWARDLY RECTIFYING K CHANNELS 11 8.99e-02 -0.295000 2.51e-01
REACTOME INTEGRIN ALPHAIIB BETA3 SIGNALING 16 4.38e-02 -0.291000 1.59e-01
REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S 49 4.62e-04 0.290000 4.41e-03
REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS 23 1.77e-02 -0.286000 8.24e-02
REACTOME ADP SIGNALLING THROUGH P2RY1 12 8.70e-02 -0.285000 2.47e-01
REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION 21 2.41e-02 -0.285000 1.01e-01
REACTOME SIGNALING BY ROBO RECEPTOR 20 2.81e-02 -0.284000 1.13e-01
REACTOME CELL CYCLE CHECKPOINTS 78 1.53e-05 0.284000 2.56e-04
REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE 15 5.95e-02 0.281000 1.92e-01
REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX 42 1.68e-03 0.280000 1.33e-02
REACTOME PLATELET AGGREGATION PLUG FORMATION 17 4.56e-02 -0.280000 1.62e-01
REACTOME MTORC1 MEDIATED SIGNALLING 11 1.09e-01 0.279000 2.76e-01
REACTOME G1 S TRANSITION 67 8.14e-05 0.279000 1.15e-03
REACTOME GLYCOLYSIS 19 3.62e-02 0.278000 1.38e-01
REACTOME FRS2 MEDIATED CASCADE 17 4.77e-02 -0.278000 1.65e-01
REACTOME S PHASE 71 7.52e-05 0.272000 1.10e-03
REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES 16 6.31e-02 -0.268000 1.97e-01
REACTOME MHC CLASS II ANTIGEN PRESENTATION 60 3.45e-04 0.268000 3.81e-03
REACTOME G PROTEIN ACTIVATION 11 1.25e-01 -0.267000 3.06e-01
REACTOME VIRAL MESSENGER RNA SYNTHESIS 14 8.46e-02 0.266000 2.41e-01
REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS 11 1.27e-01 -0.266000 3.07e-01
REACTOME SHC MEDIATED CASCADE 11 1.28e-01 -0.265000 3.08e-01
REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING 20 4.14e-02 -0.264000 1.55e-01
REACTOME INTEGRIN CELL SURFACE INTERACTIONS 40 4.49e-03 -0.260000 2.97e-02
REACTOME HOST INTERACTIONS OF HIV FACTORS 97 1.12e-05 0.259000 2.02e-04
REACTOME SEMAPHORIN INTERACTIONS 41 4.51e-03 -0.257000 2.97e-02
REACTOME SPRY REGULATION OF FGF SIGNALING 12 1.27e-01 -0.255000 3.07e-01
REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES 107 5.75e-06 0.254000 1.28e-04
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT 19 5.75e-02 0.252000 1.90e-01
REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS 20 5.20e-02 -0.251000 1.76e-01
REACTOME SIGNALLING TO ERKS 28 2.22e-02 -0.250000 9.53e-02
REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR 10 1.74e-01 -0.248000 3.69e-01
REACTOME COLLAGEN FORMATION 26 2.87e-02 0.248000 1.15e-01
REACTOME TGF BETA RECEPTOR SIGNALING ACTIVATES SMADS 23 4.16e-02 -0.246000 1.55e-01
REACTOME RAP1 SIGNALLING 12 1.42e-01 -0.245000 3.27e-01
REACTOME TRANSLATION 124 2.76e-06 0.245000 7.19e-05
REACTOME HIV INFECTION 156 1.76e-07 0.243000 1.76e-05
REACTOME IL RECEPTOR SHC SIGNALING 15 1.04e-01 0.243000 2.70e-01
REACTOME INTERFERON GAMMA SIGNALING 24 4.04e-02 0.242000 1.52e-01
REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE 11 1.66e-01 -0.241000 3.62e-01
REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES 32 1.83e-02 -0.241000 8.24e-02
REACTOME CELL DEATH SIGNALLING VIA NRAGE NRIF AND NADE 39 9.25e-03 -0.241000 5.04e-02
REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING 38 1.03e-02 0.241000 5.55e-02
REACTOME PROLONGED ERK ACTIVATION EVENTS 16 9.82e-02 -0.239000 2.64e-01
REACTOME P38MAPK EVENTS 10 2.02e-01 -0.233000 4.05e-01
REACTOME ELONGATION ARREST AND RECOVERY 24 4.84e-02 0.233000 1.66e-01
REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL 11 1.84e-01 -0.232000 3.78e-01
REACTOME PYRUVATE METABOLISM 16 1.11e-01 0.230000 2.79e-01
REACTOME SMOOTH MUSCLE CONTRACTION 18 9.13e-02 -0.230000 2.53e-01
REACTOME PHOSPHORYLATION OF THE APC C 14 1.37e-01 0.230000 3.19e-01
REACTOME PEROXISOMAL LIPID METABOLISM 16 1.12e-01 0.230000 2.79e-01
REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE 38 1.51e-02 0.228000 7.30e-02
REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES 12 1.72e-01 0.228000 3.68e-01
REACTOME REGULATION OF IFNG SIGNALING 10 2.22e-01 0.223000 4.25e-01
REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION 86 3.60e-04 0.223000 3.81e-03
REACTOME EXTRACELLULAR MATRIX ORGANIZATION 31 3.17e-02 0.223000 1.25e-01
REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS 13 1.69e-01 -0.220000 3.65e-01
REACTOME REGULATION OF INSULIN SECRETION 39 1.74e-02 -0.220000 8.24e-02
REACTOME METAL ION SLC TRANSPORTERS 12 1.87e-01 -0.220000 3.83e-01
REACTOME DNA REPAIR 68 1.93e-03 0.218000 1.46e-02
REACTOME NEPHRIN INTERACTIONS 15 1.46e-01 -0.217000 3.32e-01
REACTOME CITRIC ACID CYCLE TCA CYCLE 19 1.03e-01 0.216000 2.70e-01
REACTOME MAPK TARGETS NUCLEAR EVENTS MEDIATED BY MAP KINASES 26 6.17e-02 -0.212000 1.94e-01
REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION 10 2.51e-01 0.210000 4.55e-01
REACTOME ERKS ARE INACTIVATED 10 2.52e-01 -0.209000 4.55e-01
REACTOME NETRIN1 SIGNALING 21 9.79e-02 -0.209000 2.64e-01
REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER 25 7.14e-02 0.208000 2.12e-01
REACTOME RNA POL II PRE TRANSCRIPTION EVENTS 50 1.14e-02 0.207000 5.78e-02
REACTOME GPVI MEDIATED ACTIVATION CASCADE 17 1.43e-01 0.206000 3.27e-01
REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT 16 1.55e-01 -0.205000 3.46e-01
REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER 21 1.06e-01 0.204000 2.72e-01
REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS 13 2.05e-01 -0.203000 4.05e-01
REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY 18 1.37e-01 -0.203000 3.19e-01
REACTOME DEADENYLATION OF MRNA 16 1.62e-01 0.202000 3.58e-01
REACTOME MITOTIC G1 G1 S PHASES 83 1.55e-03 0.201000 1.25e-02
REACTOME KERATAN SULFATE BIOSYNTHESIS 11 2.52e-01 0.200000 4.55e-01
REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS 15 1.83e-01 0.199000 3.78e-01
REACTOME MRNA SPLICING 100 6.37e-04 0.198000 5.84e-03
REACTOME PLATELET SENSITIZATION BY LDL 11 2.56e-01 -0.198000 4.57e-01
REACTOME GABA RECEPTOR ACTIVATION 16 1.71e-01 -0.198000 3.67e-01
REACTOME DOWNSTREAM SIGNALING EVENTS OF B CELL RECEPTOR BCR 81 2.19e-03 0.197000 1.60e-02
REACTOME SIGNALING BY TGF BETA RECEPTOR COMPLEX 52 1.40e-02 -0.197000 6.91e-02
REACTOME G ALPHA S SIGNALLING EVENTS 29 6.82e-02 -0.196000 2.06e-01
REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER 32 5.57e-02 -0.196000 1.85e-01
REACTOME PLATELET HOMEOSTASIS 33 5.25e-02 -0.195000 1.77e-01
REACTOME RNA POL III TRANSCRIPTION 31 6.10e-02 0.195000 1.93e-01
REACTOME FORMATION OF THE HIV1 EARLY ELONGATION COMPLEX 28 7.63e-02 0.194000 2.23e-01
REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC 19 1.46e-01 0.193000 3.32e-01
REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION 55 1.37e-02 -0.192000 6.82e-02
REACTOME MRNA CAPPING 28 7.85e-02 0.192000 2.28e-01
REACTOME CELL CELL JUNCTION ORGANIZATION 15 2.03e-01 -0.190000 4.05e-01
REACTOME MRNA PROCESSING 139 1.27e-04 0.189000 1.75e-03
REACTOME PEPTIDE CHAIN ELONGATION 67 7.63e-03 0.189000 4.30e-02
REACTOME CLASS I MHC MEDIATED ANTIGEN PROCESSING PRESENTATION 190 8.20e-06 0.189000 1.60e-04
REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION 13 2.40e-01 0.188000 4.47e-01
REACTOME REGULATION OF MRNA STABILITY BY PROTEINS THAT BIND AU RICH ELEMENTS 72 5.95e-03 0.188000 3.55e-02
REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA 126 3.30e-04 0.186000 3.81e-03
REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE 89 2.67e-03 0.185000 1.89e-02
REACTOME ACTIVATION OF KAINATE RECEPTORS UPON GLUTAMATE BINDING 12 2.68e-01 -0.185000 4.74e-01
REACTOME NUCLEAR EVENTS KINASE AND TRANSCRIPTION FACTOR ACTIVATION 21 1.47e-01 -0.183000 3.33e-01
REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT 98 1.83e-03 -0.183000 1.43e-02
REACTOME RNA POL I RNA POL III AND MITOCHONDRIAL TRANSCRIPTION 56 1.85e-02 0.182000 8.24e-02
REACTOME DCC MEDIATED ATTRACTIVE SIGNALING 10 3.20e-01 -0.182000 5.32e-01
REACTOME MICRORNA MIRNA BIOGENESIS 18 1.83e-01 0.182000 3.78e-01
REACTOME ARMS MEDIATED ACTIVATION 14 2.41e-01 -0.181000 4.47e-01
REACTOME APC C CDC20 MEDIATED DEGRADATION OF CYCLIN B 16 2.11e-01 0.181000 4.13e-01
REACTOME MITOCHONDRIAL TRNA AMINOACYLATION 20 1.63e-01 0.180000 3.58e-01
REACTOME ERK MAPK TARGETS 18 1.87e-01 -0.180000 3.83e-01
REACTOME SIGNALLING TO RAS 20 1.65e-01 -0.179000 3.61e-01
REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES 43 4.21e-02 0.179000 1.55e-01
REACTOME ACTIVATION OF BH3 ONLY PROTEINS 11 3.07e-01 -0.178000 5.23e-01
REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION 17 2.05e-01 -0.178000 4.05e-01
REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION 83 5.29e-03 0.178000 3.30e-02
REACTOME INFLUENZA LIFE CYCLE 114 1.17e-03 0.177000 1.03e-02
REACTOME MYOGENESIS 21 1.62e-01 -0.177000 3.58e-01
REACTOME HIV LIFE CYCLE 94 3.25e-03 0.176000 2.24e-02
REACTOME GABA B RECEPTOR ACTIVATION 15 2.42e-01 -0.175000 4.47e-01
REACTOME GPCR DOWNSTREAM SIGNALING 107 2.01e-03 -0.173000 1.50e-02
REACTOME INHIBITION OF THE PROTEOLYTIC ACTIVITY OF APC C REQUIRED FOR THE ONSET OF ANAPHASE BY MITOTIC SPINDLE CHECKPOINT COMPONENTS 15 2.55e-01 0.170000 4.57e-01
REACTOME MEIOSIS 24 1.50e-01 0.170000 3.38e-01
REACTOME TRANSCRIPTION 127 1.12e-03 0.168000 1.01e-02
REACTOME FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX 27 1.31e-01 0.168000 3.13e-01
REACTOME NUCLEOTIDE EXCISION REPAIR 40 6.77e-02 0.167000 2.06e-01
REACTOME FATTY ACYL COA BIOSYNTHESIS 12 3.17e-01 0.167000 5.31e-01
REACTOME P75 NTR RECEPTOR MEDIATED SIGNALLING 54 3.44e-02 -0.167000 1.33e-01
REACTOME MITOTIC M M G1 PHASES 96 4.90e-03 0.167000 3.15e-02
REACTOME BASIGIN INTERACTIONS 14 2.81e-01 0.167000 4.92e-01
REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION 165 2.40e-04 0.167000 2.88e-03
REACTOME RNA POL II TRANSCRIPTION 86 7.99e-03 0.166000 4.45e-02
REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION 10 3.64e-01 -0.166000 5.66e-01
REACTOME G BETA GAMMA SIGNALLING THROUGH PI3KGAMMA 12 3.21e-01 -0.166000 5.32e-01
REACTOME SIGNALING BY RHO GTPASES 63 2.36e-02 -0.165000 9.95e-02
REACTOME PHOSPHOLIPASE C MEDIATED CASCADE 21 1.95e-01 -0.164000 3.95e-01
REACTOME INTRINSIC PATHWAY FOR APOPTOSIS 17 2.46e-01 -0.163000 4.52e-01
REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE 13 3.11e-01 -0.162000 5.28e-01
REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN 18 2.36e-01 -0.161000 4.44e-01
REACTOME SIGNALING BY THE B CELL RECEPTOR BCR 97 6.21e-03 0.161000 3.59e-02
REACTOME G PROTEIN BETA GAMMA SIGNALLING 13 3.16e-01 -0.161000 5.31e-01
REACTOME STRIATED MUSCLE CONTRACTION 22 1.95e-01 0.160000 3.95e-01
REACTOME ACTIVATED TLR4 SIGNALLING 62 3.04e-02 -0.159000 1.21e-01
REACTOME FORMATION OF RNA POL II ELONGATION COMPLEX 35 1.04e-01 0.159000 2.70e-01
REACTOME DNA REPLICATION 108 4.46e-03 0.159000 2.97e-02
REACTOME TRANSCRIPTION COUPLED NER TC NER 36 1.02e-01 0.158000 2.70e-01
REACTOME REGULATION OF KIT SIGNALING 10 3.90e-01 -0.157000 5.87e-01
REACTOME FORMATION OF INCISION COMPLEX IN GG NER 18 2.50e-01 0.157000 4.55e-01
REACTOME HEPARAN SULFATE HEPARIN HS GAG METABOLISM 25 1.76e-01 -0.157000 3.71e-01
REACTOME TRAF6 MEDIATED NFKB ACTIVATION 13 3.30e-01 -0.156000 5.36e-01
REACTOME GLOBAL GENOMIC NER GG NER 25 1.78e-01 0.156000 3.73e-01
REACTOME NEURONAL SYSTEM 90 1.10e-02 -0.156000 5.63e-02
REACTOME REGULATORY RNA PATHWAYS 21 2.18e-01 0.155000 4.23e-01
REACTOME PPARA ACTIVATES GENE EXPRESSION 80 1.67e-02 -0.155000 8.00e-02
REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT 107 6.00e-03 0.154000 3.55e-02
REACTOME APOPTOSIS 97 8.89e-03 0.154000 4.89e-02
REACTOME SIGNALING BY NODAL 11 3.77e-01 -0.154000 5.77e-01
REACTOME TRAF6 MEDIATED INDUCTION OF NFKB AND MAP KINASES UPON TLR7 8 OR 9 ACTIVATION 57 4.58e-02 -0.153000 1.62e-01
REACTOME METABOLISM OF MRNA 178 4.56e-04 0.153000 4.41e-03
REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION 14 3.22e-01 -0.153000 5.32e-01
REACTOME LATE PHASE OF HIV LIFE CYCLE 86 1.44e-02 0.153000 7.04e-02
REACTOME SHC RELATED EVENTS 14 3.23e-01 -0.153000 5.32e-01
REACTOME SIGNALING BY GPCR 149 1.39e-03 -0.152000 1.16e-02
REACTOME MYD88 MAL CASCADE INITIATED ON PLASMA MEMBRANE 58 4.58e-02 -0.152000 1.62e-01
REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES 38 1.06e-01 0.152000 2.72e-01
REACTOME INTERACTIONS OF VPR WITH HOST CELLULAR PROTEINS 28 1.68e-01 0.151000 3.63e-01
REACTOME CELL CYCLE MITOTIC 190 3.66e-04 0.151000 3.81e-03
REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS 24 2.03e-01 0.150000 4.05e-01
REACTOME SYNTHESIS OF PA 10 4.11e-01 -0.150000 5.99e-01
REACTOME MAP KINASE ACTIVATION IN TLR CASCADE 42 9.27e-02 -0.150000 2.55e-01
REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX 85 1.82e-02 0.149000 8.24e-02
REACTOME CELL CELL COMMUNICATION 53 6.35e-02 -0.148000 1.97e-01
REACTOME CD28 DEPENDENT PI3K AKT SIGNALING 15 3.30e-01 0.145000 5.36e-01
REACTOME AXON GUIDANCE 141 3.01e-03 -0.145000 2.11e-02
REACTOME G0 AND EARLY G1 12 3.91e-01 -0.143000 5.87e-01
REACTOME HEMOSTASIS 218 3.47e-04 -0.142000 3.81e-03
REACTOME METABOLISM OF RNA 217 3.62e-04 0.141000 3.81e-03
REACTOME G2 M CHECKPOINTS 17 3.14e-01 0.141000 5.31e-01
REACTOME TRIF MEDIATED TLR3 SIGNALING 54 7.45e-02 -0.141000 2.19e-01
REACTOME ENOS ACTIVATION AND REGULATION 12 4.01e-01 -0.140000 5.90e-01
REACTOME PKB MEDIATED EVENTS 27 2.09e-01 0.140000 4.11e-01
REACTOME RNA POL I TRANSCRIPTION TERMINATION 19 2.92e-01 0.140000 5.06e-01
REACTOME TRANSMEMBRANE TRANSPORT OF SMALL MOLECULES 176 1.52e-03 -0.139000 1.25e-02
REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 47 1.01e-01 -0.139000 2.70e-01
REACTOME TRAFFICKING OF AMPA RECEPTORS 16 3.40e-01 0.138000 5.47e-01
REACTOME CELL CYCLE 216 5.65e-04 0.137000 5.29e-03
REACTOME PIP3 ACTIVATES AKT SIGNALING 25 2.37e-01 -0.137000 4.44e-01
REACTOME SIGNALLING TO P38 VIA RIT AND RIN 11 4.33e-01 -0.137000 6.22e-01
REACTOME NFKB AND MAP KINASES ACTIVATION MEDIATED BY TLR4 SIGNALING REPERTOIRE 52 9.01e-02 -0.136000 2.51e-01
REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY 28 2.13e-01 -0.136000 4.16e-01
REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS 16 3.47e-01 0.136000 5.55e-01
REACTOME METABOLISM OF PORPHYRINS 12 4.16e-01 -0.136000 6.03e-01
REACTOME REGULATION OF WATER BALANCE BY RENAL AQUAPORINS 22 2.73e-01 -0.135000 4.80e-01
REACTOME DEVELOPMENTAL BIOLOGY 237 4.14e-04 -0.134000 4.14e-03
REACTOME AQUAPORIN MEDIATED TRANSPORT 23 2.68e-01 -0.133000 4.74e-01
REACTOME NOD1 2 SIGNALING PATHWAY 18 3.28e-01 -0.133000 5.36e-01
REACTOME MITOTIC G2 G2 M PHASES 49 1.07e-01 0.133000 2.73e-01
REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA 19 3.18e-01 -0.133000 5.31e-01
REACTOME EFFECTS OF PIP2 HYDROLYSIS 14 3.92e-01 -0.132000 5.87e-01
REACTOME G ALPHA1213 SIGNALLING EVENTS 43 1.36e-01 -0.131000 3.19e-01
REACTOME MITOCHONDRIAL PROTEIN IMPORT 42 1.41e-01 0.131000 3.27e-01
REACTOME APC CDC20 MEDIATED DEGRADATION OF NEK2A 17 3.51e-01 0.131000 5.56e-01
REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES 66 6.78e-02 -0.130000 2.06e-01
REACTOME GLUCAGON SIGNALING IN METABOLIC REGULATION 17 3.54e-01 -0.130000 5.56e-01
REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION 111 1.85e-02 -0.130000 8.24e-02
REACTOME SIGNALING BY NOTCH1 51 1.11e-01 -0.129000 2.78e-01
REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE 22 2.94e-01 0.129000 5.06e-01
REACTOME RNA POL I TRANSCRIPTION INITIATION 23 2.86e-01 0.129000 4.99e-01
REACTOME GLYCOSAMINOGLYCAN METABOLISM 47 1.27e-01 -0.129000 3.07e-01
REACTOME RNA POL I TRANSCRIPTION 26 2.58e-01 0.128000 4.59e-01
REACTOME SHC1 EVENTS IN ERBB4 SIGNALING 13 4.24e-01 -0.128000 6.13e-01
REACTOME RNA POL III CHAIN ELONGATION 16 3.76e-01 0.128000 5.77e-01
REACTOME NRIF SIGNALS CELL DEATH FROM THE NUCLEUS 12 4.48e-01 -0.126000 6.38e-01
REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION 59 9.38e-02 -0.126000 2.57e-01
REACTOME DESTABILIZATION OF MRNA BY TRISTETRAPROLIN TTP 16 3.82e-01 -0.126000 5.81e-01
REACTOME DOWNSTREAM TCR SIGNALING 20 3.30e-01 0.126000 5.36e-01
REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM 48 1.34e-01 0.125000 3.18e-01
REACTOME CTLA4 INHIBITORY SIGNALING 16 3.93e-01 -0.123000 5.87e-01
REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING 12 4.60e-01 0.123000 6.49e-01
REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT 29 2.56e-01 0.122000 4.57e-01
REACTOME SIGNALING BY NOTCH 75 6.90e-02 -0.122000 2.06e-01
REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK 62 1.01e-01 -0.121000 2.70e-01
REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE 13 4.55e-01 0.120000 6.45e-01
REACTOME SULFUR AMINO ACID METABOLISM 17 3.94e-01 0.119000 5.87e-01
REACTOME PI 3K CASCADE 35 2.23e-01 -0.119000 4.25e-01
REACTOME G ALPHA Q SIGNALLING EVENTS 44 1.74e-01 -0.119000 3.69e-01
REACTOME ADAPTIVE IMMUNE SYSTEM 336 2.21e-04 0.118000 2.80e-03
REACTOME INTERFERON SIGNALING 81 6.68e-02 0.118000 2.06e-01
REACTOME SEMA4D IN SEMAPHORIN SIGNALING 21 3.53e-01 -0.117000 5.56e-01
REACTOME TRIGLYCERIDE BIOSYNTHESIS 22 3.44e-01 0.117000 5.52e-01
REACTOME L1CAM INTERACTIONS 51 1.51e-01 -0.116000 3.38e-01
REACTOME CHONDROITIN SULFATE DERMATAN SULFATE METABOLISM 19 3.82e-01 -0.116000 5.81e-01
REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE 18 4.02e-01 -0.114000 5.90e-01
REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE 10 5.34e-01 0.113000 6.91e-01
REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS 22 3.59e-01 0.113000 5.61e-01
REACTOME SOS MEDIATED SIGNALLING 13 4.90e-01 -0.111000 6.75e-01
REACTOME METABOLISM OF POLYAMINES 13 4.95e-01 0.109000 6.76e-01
REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION 10 5.58e-01 -0.107000 7.08e-01
REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT 22 3.86e-01 -0.107000 5.84e-01
REACTOME GRB2 EVENTS IN ERBB2 SIGNALING 14 4.93e-01 -0.106000 6.76e-01
REACTOME CTNNB1 PHOSPHORYLATION CASCADE 14 4.95e-01 -0.105000 6.76e-01
REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA 13 5.11e-01 -0.105000 6.86e-01
REACTOME METABOLISM OF PROTEINS 301 1.88e-03 0.105000 1.44e-02
REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS 11 5.46e-01 0.105000 7.02e-01
REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS 73 1.22e-01 0.105000 3.02e-01
REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE 14 5.00e-01 0.104000 6.80e-01
REACTOME SIGNALLING BY NGF 155 2.77e-02 -0.103000 1.13e-01
REACTOME DOWNSTREAM SIGNAL TRANSDUCTION 71 1.36e-01 -0.103000 3.19e-01
REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES 52 2.05e-01 0.102000 4.05e-01
REACTOME CELL JUNCTION ORGANIZATION 29 3.53e-01 -0.099700 5.56e-01
REACTOME SIGNAL TRANSDUCTION BY L1 28 3.66e-01 -0.098800 5.67e-01
REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB 10 5.96e-01 -0.096900 7.26e-01
REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR 17 4.90e-01 0.096900 6.75e-01
REACTOME MEIOTIC SYNAPSIS 15 5.17e-01 0.096600 6.86e-01
REACTOME IMMUNE SYSTEM 517 2.32e-04 0.096200 2.86e-03
REACTOME DESTABILIZATION OF MRNA BY BRF1 16 5.14e-01 -0.094400 6.86e-01
REACTOME MRNA 3 END PROCESSING 31 3.69e-01 0.093300 5.69e-01
REACTOME METABOLISM OF CARBOHYDRATES 129 6.88e-02 0.093200 2.06e-01
REACTOME SIGNALING BY FGFR 70 1.81e-01 -0.092700 3.78e-01
REACTOME SHC MEDIATED SIGNALLING 13 5.64e-01 -0.092400 7.11e-01
REACTOME LYSOSOME VESICLE BIOGENESIS 17 5.19e-01 0.090400 6.86e-01
REACTOME INTERFERON ALPHA BETA SIGNALING 17 5.24e-01 -0.089300 6.88e-01
REACTOME TRANSPORT TO THE GOLGI AND SUBSEQUENT MODIFICATION 22 4.71e-01 0.088800 6.58e-01
REACTOME IL 2 SIGNALING 25 4.46e-01 0.088200 6.36e-01
REACTOME OPIOID SIGNALLING 41 3.31e-01 -0.087800 5.36e-01
REACTOME SPHINGOLIPID METABOLISM 36 3.63e-01 0.087800 5.66e-01
REACTOME PURINE SALVAGE 10 6.32e-01 -0.087600 7.50e-01
REACTOME PI3K EVENTS IN ERBB4 SIGNALING 28 4.26e-01 -0.087000 6.13e-01
REACTOME METABOLISM OF NUCLEOTIDES 48 3.02e-01 0.086200 5.18e-01
REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY 24 4.66e-01 0.086100 6.55e-01
REACTOME SIGNALING BY HIPPO 15 5.69e-01 0.085000 7.11e-01
REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS 16 5.59e-01 -0.084400 7.08e-01
REACTOME CIRCADIAN CLOCK 43 3.40e-01 -0.084200 5.47e-01
REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS 17 5.52e-01 -0.083300 7.06e-01
REACTOME RECYCLING PATHWAY OF L1 19 5.36e-01 0.082000 6.91e-01
REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS 44 3.49e-01 0.081700 5.56e-01
REACTOME DNA STRAND ELONGATION 14 5.97e-01 0.081600 7.26e-01
REACTOME TIE2 SIGNALING 13 6.11e-01 0.081500 7.37e-01
REACTOME IL 3 5 AND GM CSF SIGNALING 25 4.81e-01 0.081400 6.71e-01
REACTOME DARPP 32 EVENTS 18 5.55e-01 -0.080400 7.08e-01
REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S 37 4.02e-01 -0.079700 5.90e-01
REACTOME TAK1 ACTIVATES NFKB BY PHOSPHORYLATION AND ACTIVATION OF IKKS COMPLEX 16 5.82e-01 -0.079600 7.16e-01
REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS 17 5.72e-01 0.079300 7.11e-01
REACTOME NEF MEDIATES DOWN MODULATION OF CELL SURFACE RECEPTORS BY RECRUITING THEM TO CLATHRIN ADAPTERS 14 6.08e-01 0.079100 7.36e-01
REACTOME TELOMERE MAINTENANCE 19 5.52e-01 0.078900 7.06e-01
REACTOME MRNA SPLICING MINOR PATHWAY 39 3.95e-01 0.078700 5.88e-01
REACTOME RIG I MDA5 MEDIATED INDUCTION OF IFN ALPHA BETA PATHWAYS 38 4.02e-01 -0.078700 5.90e-01
REACTOME G ALPHA Z SIGNALLING EVENTS 22 5.25e-01 -0.078300 6.88e-01
REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR 61 2.93e-01 -0.077900 5.06e-01
REACTOME RESPIRATORY ELECTRON TRANSPORT 59 3.04e-01 0.077500 5.20e-01
REACTOME SIGNALING BY FGFR IN DISEASE 83 2.29e-01 -0.076700 4.35e-01
REACTOME GENERIC TRANSCRIPTION PATHWAY 136 1.24e-01 -0.076700 3.06e-01
REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN 22 5.34e-01 -0.076600 6.91e-01
REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS 25 5.08e-01 -0.076600 6.85e-01
REACTOME KERATAN SULFATE KERATIN METABOLISM 14 6.29e-01 0.074600 7.49e-01
REACTOME E2F MEDIATED REGULATION OF DNA REPLICATION 15 6.20e-01 0.073900 7.41e-01
REACTOME METABOLISM OF VITAMINS AND COFACTORS 37 4.41e-01 -0.073300 6.31e-01
REACTOME VITAMIN B5 PANTOTHENATE METABOLISM 10 6.92e-01 0.072300 8.00e-01
REACTOME SIGNALING BY FGFR1 MUTANTS 21 5.68e-01 -0.072000 7.11e-01
REACTOME TOLL RECEPTOR CASCADES 75 2.88e-01 -0.071100 5.01e-01
REACTOME NGF SIGNALLING VIA TRKA FROM THE PLASMA MEMBRANE 101 2.19e-01 -0.071000 4.24e-01
REACTOME POST TRANSLATIONAL PROTEIN MODIFICATION 98 2.30e-01 -0.070400 4.35e-01
REACTOME MEMBRANE TRAFFICKING 93 2.48e-01 0.069600 4.54e-01
REACTOME SIGNALING BY FGFR MUTANTS 28 5.25e-01 -0.069500 6.88e-01
REACTOME PURINE METABOLISM 27 5.34e-01 0.069300 6.91e-01
REACTOME RORA ACTIVATES CIRCADIAN EXPRESSION 21 5.86e-01 -0.068700 7.18e-01
REACTOME HS GAG DEGRADATION 11 6.94e-01 0.068600 8.00e-01
REACTOME RNA POL III TRANSCRIPTION TERMINATION 18 6.18e-01 0.068000 7.39e-01
REACTOME PI3K AKT ACTIVATION 31 5.17e-01 -0.067300 6.86e-01
REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN 23 5.79e-01 0.066900 7.15e-01
REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION 29 5.34e-01 -0.066800 6.91e-01
REACTOME CHOLESTEROL BIOSYNTHESIS 13 6.78e-01 -0.066500 7.89e-01
REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL 53 4.03e-01 -0.066500 5.90e-01
REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS 42 4.70e-01 -0.064600 6.58e-01
REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA 11 7.12e-01 0.064300 8.14e-01
REACTOME SIGNALING BY ERBB2 68 3.69e-01 -0.063100 5.69e-01
REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM 127 2.22e-01 -0.063000 4.25e-01
REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY 11 7.18e-01 0.062800 8.18e-01
REACTOME INSULIN RECEPTOR RECYCLING 15 6.78e-01 0.062000 7.89e-01
REACTOME NUCLEAR SIGNALING BY ERBB4 22 6.16e-01 -0.061800 7.39e-01
REACTOME GLUTATHIONE CONJUGATION 12 7.14e-01 -0.061200 8.14e-01
REACTOME ACTIVATION OF NMDA RECEPTOR UPON GLUTAMATE BINDING AND POSTSYNAPTIC EVENTS 17 6.69e-01 -0.060000 7.82e-01
REACTOME POST NMDA RECEPTOR ACTIVATION EVENTS 17 6.69e-01 -0.060000 7.82e-01
REACTOME UNFOLDED PROTEIN RESPONSE 63 4.13e-01 -0.059800 6.00e-01
REACTOME METABOLISM OF NON CODING RNA 42 5.04e-01 0.059700 6.82e-01
REACTOME PI3K CASCADE 46 4.91e-01 0.058800 6.75e-01
REACTOME COSTIMULATION BY THE CD28 FAMILY 33 5.60e-01 0.058700 7.08e-01
REACTOME CALNEXIN CALRETICULIN CYCLE 11 7.37e-01 0.058500 8.37e-01
REACTOME DEADENYLATION DEPENDENT MRNA DECAY 39 5.32e-01 0.058000 6.91e-01
REACTOME SIGNALING BY SCF KIT 57 4.57e-01 -0.057000 6.47e-01
REACTOME CYTOKINE SIGNALING IN IMMUNE SYSTEM 148 2.34e-01 0.057000 4.41e-01
REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION 33 5.72e-01 -0.056900 7.11e-01
REACTOME PLC BETA MEDIATED EVENTS 20 6.61e-01 -0.056600 7.79e-01
REACTOME MITOTIC PROMETAPHASE 44 5.16e-01 -0.056600 6.86e-01
REACTOME CD28 CO STIMULATION 22 6.47e-01 0.056400 7.67e-01
REACTOME PRE NOTCH EXPRESSION AND PROCESSING 31 5.99e-01 -0.054700 7.26e-01
REACTOME PI METABOLISM 37 5.68e-01 0.054300 7.11e-01
REACTOME TRANS GOLGI NETWORK VESICLE BUDDING 50 5.14e-01 0.053500 6.86e-01
REACTOME CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION 36 5.84e-01 0.052800 7.18e-01
REACTOME LIPOPROTEIN METABOLISM 11 7.64e-01 0.052200 8.52e-01
REACTOME PHASE II CONJUGATION 24 6.65e-01 0.051000 7.82e-01
REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK 10 7.83e-01 -0.050400 8.64e-01
REACTOME INSULIN SYNTHESIS AND PROCESSING 13 7.58e-01 0.049300 8.47e-01
REACTOME INTEGRATION OF ENERGY METABOLISM 62 5.03e-01 -0.049300 6.82e-01
REACTOME DESTABILIZATION OF MRNA BY KSRP 14 7.51e-01 -0.049000 8.45e-01
REACTOME SIGNALING BY ERBB4 67 4.89e-01 -0.049000 6.75e-01
REACTOME PROTEIN FOLDING 40 6.13e-01 0.046300 7.37e-01
REACTOME EGFR DOWNREGULATION 23 7.11e-01 0.044700 8.14e-01
REACTOME ION TRANSPORT BY P TYPE ATPASES 17 7.50e-01 0.044700 8.45e-01
REACTOME SIGNALING BY FGFR1 FUSION MUTANTS 17 7.59e-01 0.043100 8.47e-01
REACTOME DAG AND IP3 SIGNALING 16 7.69e-01 -0.042500 8.54e-01
REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM 16 7.81e-01 -0.040200 8.64e-01
REACTOME IRON UPTAKE AND TRANSPORT 23 7.43e-01 -0.039600 8.42e-01
REACTOME BOTULINUM NEUROTOXICITY 10 8.30e-01 -0.039300 8.97e-01
REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS 10 8.30e-01 -0.039300 8.97e-01
REACTOME SIGNALING BY INSULIN RECEPTOR 74 5.72e-01 0.038000 7.11e-01
REACTOME SIGNALING BY BMP 17 7.87e-01 -0.037800 8.67e-01
REACTOME CHROMOSOME MAINTENANCE 36 7.08e-01 0.036100 8.14e-01
REACTOME DIABETES PATHWAYS 90 5.79e-01 -0.033900 7.15e-01
REACTOME PROCESSING OF CAPPED INTRONLESS PRE MRNA 18 8.08e-01 -0.033100 8.85e-01
REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS 21 8.06e-01 -0.031000 8.85e-01
REACTOME PROCESSING OF INTRONLESS PRE MRNAS 13 8.49e-01 0.030500 9.09e-01
REACTOME PRE NOTCH PROCESSING IN GOLGI 14 8.47e-01 -0.029800 9.09e-01
REACTOME PHOSPHOLIPID METABOLISM 114 5.92e-01 0.029200 7.23e-01
REACTOME PI3K EVENTS IN ERBB2 SIGNALING 32 7.76e-01 -0.029100 8.60e-01
REACTOME SIGNALING BY ILS 66 6.84e-01 -0.029100 7.94e-01
REACTOME LAGGING STRAND SYNTHESIS 10 8.78e-01 0.028000 9.32e-01
REACTOME SIGNALING BY PDGF 86 6.54e-01 -0.028000 7.73e-01
REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL 44 7.53e-01 -0.027500 8.45e-01
REACTOME G1 PHASE 25 8.16e-01 -0.026800 8.89e-01
REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE 11 8.81e-01 0.026000 9.33e-01
REACTOME IL1 SIGNALING 26 8.19e-01 -0.025900 8.89e-01
REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION 18 8.53e-01 -0.025300 9.11e-01
REACTOME GLUCOSE TRANSPORT 30 8.17e-01 -0.024400 8.89e-01
REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING 17 8.62e-01 0.024300 9.19e-01
REACTOME NCAM SIGNALING FOR NEURITE OUT GROWTH 34 8.10e-01 0.023900 8.85e-01
REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS 16 8.74e-01 -0.023000 9.29e-01
REACTOME GROWTH HORMONE RECEPTOR SIGNALING 17 8.86e-01 -0.020200 9.35e-01
REACTOME JNK C JUN KINASES PHOSPHORYLATION AND ACTIVATION MEDIATED BY ACTIVATED HUMAN TAK1 13 9.04e-01 -0.019400 9.52e-01
REACTOME P75NTR SIGNALS VIA NFKB 10 9.27e-01 0.016800 9.64e-01
REACTOME INNATE IMMUNE SYSTEM 122 7.51e-01 -0.016700 8.45e-01
REACTOME O LINKED GLYCOSYLATION OF MUCINS 10 9.29e-01 0.016200 9.64e-01
REACTOME INSULIN RECEPTOR SIGNALLING CASCADE 60 8.35e-01 0.015600 9.00e-01
REACTOME ACTIVATION OF GENES BY ATF4 19 9.08e-01 -0.015300 9.55e-01
REACTOME ASPARAGINE N LINKED GLYCOSYLATION 62 8.43e-01 0.014500 9.07e-01
REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS 280 6.91e-01 -0.013900 8.00e-01
REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE 18 9.23e-01 0.013200 9.64e-01
REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS 17 9.27e-01 -0.012800 9.64e-01
REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS 12 9.39e-01 -0.012700 9.68e-01
REACTOME ION CHANNEL TRANSPORT 18 9.30e-01 0.011900 9.64e-01
REACTOME TCR SIGNALING 27 9.16e-01 0.011700 9.61e-01
REACTOME EXTENSION OF TELOMERES 15 9.38e-01 0.011600 9.68e-01
REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 14 9.49e-01 0.009790 9.72e-01
REACTOME APOPTOTIC EXECUTION PHASE 27 9.31e-01 -0.009640 9.64e-01
REACTOME GLYCOSPHINGOLIPID METABOLISM 21 9.47e-01 0.008360 9.72e-01
REACTOME PERK REGULATED GENE EXPRESSION 21 9.48e-01 0.008290 9.72e-01
REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING 20 9.59e-01 -0.006580 9.76e-01
REACTOME REGULATION OF SIGNALING BY CBL 14 9.70e-01 0.005720 9.81e-01
REACTOME ENERGY DEPENDENT REGULATION OF MTOR BY LKB1 AMPK 17 9.69e-01 -0.005470 9.81e-01
REACTOME BIOLOGICAL OXIDATIONS 41 9.59e-01 -0.004700 9.76e-01
REACTOME GAB1 SIGNALOSOME 31 9.65e-01 -0.004530 9.80e-01
REACTOME SIGNALING BY EGFR IN CANCER 82 9.52e-01 -0.003880 9.73e-01
REACTOME PYRIMIDINE METABOLISM 10 9.83e-01 0.003800 9.88e-01
REACTOME SHC1 EVENTS IN EGFR SIGNALING 14 9.84e-01 -0.003060 9.88e-01
REACTOME CA DEPENDENT EVENTS 14 9.87e-01 0.002590 9.89e-01
REACTOME MUSCLE CONTRACTION 36 9.79e-01 -0.002500 9.88e-01
REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT 21 9.94e-01 0.000951 9.94e-01



Detailed Gene set reports



REACTOME_GLYCOGEN_BREAKDOWN_GLYCOGENOLYSIS

REACTOME_GLYCOGEN_BREAKDOWN_GLYCOGENOLYSIS
1
set REACTOME_GLYCOGEN_BREAKDOWN_GLYCOGENOLYSIS
setSize 11
pANOVA 0.000416
s.dist 0.615
p.adjustANOVA 0.00414



Top enriched genes

Top 20 genes
GeneID Gene Rank
Phka1 4400
Agl 4381
Phkb 4377
Phka2 4305
Pygm 4193
Phkg1 3814
Phkg2 3164
Pgm1 2888
Gyg 2567
Calm1 -190
Pygb -2481

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Phka1 4400
Agl 4381
Phkb 4377
Phka2 4305
Pygm 4193
Phkg1 3814
Phkg2 3164
Pgm1 2888
Gyg 2567
Calm1 -190
Pygb -2481



REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES

REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES
20
set REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES
setSize 40
pANOVA 2.02e-07
s.dist 0.475
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Mrc1 4525
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Mrc1 4525
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Psmd8 -625
Psmf1 -783
Psmb10 -830
Psma2 -1441
Psme1 -2898
Mrc2 -4223



REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1

REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1
421
set REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1
setSize 42
pANOVA 1.53e-07
s.dist 0.468
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cul1 1053
Psmd3 928
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898



REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6

REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6
124
set REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6
setSize 40
pANOVA 3.58e-07
s.dist 0.465
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898



REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT

REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT
99
set REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT
setSize 42
pANOVA 3.49e-07
s.dist 0.455
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cdc25a 1158
Atm 1039
Psmd3 928
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898



REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1

REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1
280
set REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1
setSize 42
pANOVA 3.77e-07
s.dist 0.453
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Atm 1039
Psmd3 928
Trp53 904
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898



REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX

REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX
271
set REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX
setSize 45
pANOVA 2.84e-07
s.dist 0.443
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Orc5 2150
Orc4 2125
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Uba52 -285
Orc2 -517
Orc3 -613
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898



REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC

REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC
153
set REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC
setSize 43
pANOVA 8.27e-07
s.dist 0.435
p.adjustANOVA 2.85e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Odc1 4409
Nqo1 4289
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Odc1 4409
Nqo1 4289
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Psmd8 -625
Psmf1 -783
Psmb10 -830
Psma2 -1441
Oaz1 -2639
Oaz2 -2731
Psme1 -2898
Azin1 -4552



REACTOME_ANTIGEN_PRESENTATION_FOLDING_ASSEMBLY_AND_PEPTIDE_LOADING_OF_CLASS_I_MHC

REACTOME_ANTIGEN_PRESENTATION_FOLDING_ASSEMBLY_AND_PEPTIDE_LOADING_OF_CLASS_I_MHC
442
set REACTOME_ANTIGEN_PRESENTATION_FOLDING_ASSEMBLY_AND_PEPTIDE_LOADING_OF_CLASS_I_MHC
setSize 14
pANOVA 0.00491
s.dist 0.434
p.adjustANOVA 0.0315



Top enriched genes

Top 20 genes
GeneID Gene Rank
Sec31a 4489
Hspa5 4263
Sar1b 4249
B2m 4181
Canx 4090
Erap1 3896
Tap2 3593
Sec23a 3419
Calr 2461
Sec24d 634
Sec24c -536
Sec13 -866
Sec24b -1791
Pdia3 -3877

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Sec31a 4489
Hspa5 4263
Sar1b 4249
B2m 4181
Canx 4090
Erap1 3896
Tap2 3593
Sec23a 3419
Calr 2461
Sec24d 634
Sec24c -536
Sec13 -866
Sec24b -1791
Pdia3 -3877



REACTOME_ER_PHAGOSOME_PATHWAY

REACTOME_ER_PHAGOSOME_PATHWAY
30
set REACTOME_ER_PHAGOSOME_PATHWAY
setSize 48
pANOVA 2.1e-07
s.dist 0.433
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
B2m 4181
Psmc3 3975
Sec61g 3713
Psmb7 3709
Psmd7 3606
Tap2 3593
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Sec61a1 2901

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
B2m 4181
Psmc3 3975
Sec61g 3713
Psmb7 3709
Psmd7 3606
Tap2 3593
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Sec61a1 2901
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Calr 2461
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Sec61a2 568
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898
Sec61b -3533
Pdia3 -3877



REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G

REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
460
set REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
setSize 42
pANOVA 1.26e-06
s.dist 0.432
p.adjustANOVA 3.48e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Rbx1 195
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Cul5 -2341
Psme1 -2898



REACTOME_SYNTHESIS_OF_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI

REACTOME_SYNTHESIS_OF_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI
462
set REACTOME_SYNTHESIS_OF_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI
setSize 13
pANOVA 0.00697
s.dist -0.432
p.adjustANOVA 0.0398



Top enriched genes

Top 20 genes
GeneID Gene Rank
Pigx -4574
Sema6d -4043
Pigv -3345
Pigm -3274
Pigb -3269
Pigw -2460
Pign -2287
Dpm2 -1587
Pigg -1373
Pigc -912
Pigp -648
Pigo -424
Pigq 1864

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Pigx -4574
Sema6d -4043
Pigv -3345
Pigm -3274
Pigb -3269
Pigw -2460
Pign -2287
Dpm2 -1587
Pigg -1373
Pigc -912
Pigp -648
Pigo -424
Pigq 1864



REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS

REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS
437
set REACTOME_VOLTAGE_GATED_POTASSIUM_CHANNELS
setSize 10
pANOVA 0.0234
s.dist -0.414
p.adjustANOVA 0.0995



Top enriched genes

Top 20 genes
GeneID Gene Rank
Kcnc3 -3683
Kcnq4 -3622
Kcng4 -3316
Kcnq5 -3243
Kcnc1 -3054
Kcna7 -2551
Kcnf1 -2289
Kcnc4 -1343
Kcnb1 -788
Kcnab1 4479

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Kcnc3 -3683
Kcnq4 -3622
Kcng4 -3316
Kcnq5 -3243
Kcnc1 -3054
Kcna7 -2551
Kcnf1 -2289
Kcnc4 -1343
Kcnb1 -788
Kcnab1 4479



REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX

REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX
335
set REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX
setSize 48
pANOVA 9.23e-07
s.dist 0.41
p.adjustANOVA 2.88e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Orc5 2150
Orc4 2125
Mcm2 2006
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Mcm7 999
Psmd3 928
Psmb4 31
Uba52 -285
Orc2 -517
Orc3 -613
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898
E2f3 -4225



REACTOME_SIGNALING_BY_NOTCH4

REACTOME_SIGNALING_BY_NOTCH4
66
set REACTOME_SIGNALING_BY_NOTCH4
setSize 11
pANOVA 0.0189
s.dist -0.409
p.adjustANOVA 0.0834



Top enriched genes

Top 20 genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Notch4 123
Psen2 182
Psen1 388

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Notch4 123
Psen2 182
Psen1 388



REACTOME_ORC1_REMOVAL_FROM_CHROMATIN

REACTOME_ORC1_REMOVAL_FROM_CHROMATIN
46
set REACTOME_ORC1_REMOVAL_FROM_CHROMATIN
setSize 49
pANOVA 9.92e-07
s.dist 0.404
p.adjustANOVA 2.9e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Orc5 2150
Orc4 2125
Mcm2 2006
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Mcm7 999
Psmd3 928
Psmb4 31
Uba52 -285
Orc2 -517
Orc3 -613
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Rb1 -1562
Cdkn1b -2590
Psme1 -2898



REACTOME_SIGNALING_BY_NOTCH3

REACTOME_SIGNALING_BY_NOTCH3
80
set REACTOME_SIGNALING_BY_NOTCH3
setSize 11
pANOVA 0.0208
s.dist -0.403
p.adjustANOVA 0.0903



Top enriched genes

Top 20 genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Psen2 182
Psen1 388
Notch3 450

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Psen2 182
Psen1 388
Notch3 450



REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21

REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21
456
set REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21
setSize 43
pANOVA 5.35e-06
s.dist 0.401
p.adjustANOVA 0.000125



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cul1 1053
Psmd3 928
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Cdkn1b -2590
Psme1 -2898
Ccne2 -3785



REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION

REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION
26
set REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION
setSize 56
pANOVA 2.6e-07
s.dist 0.398
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Ctss 4642
Psmd9 4557
Psmd1 4542
Cyba 4539
Psmd2 4526
Mrc1 4525
Psmc1 4518
Psma1 4465
Psme4 4444
B2m 4181
Psmc3 3975
Sec61g 3713
Psmb7 3709
Psmd7 3606
Tap2 3593
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Ctss 4642
Psmd9 4557
Psmd1 4542
Cyba 4539
Psmd2 4526
Mrc1 4525
Psmc1 4518
Psma1 4465
Psme4 4444
B2m 4181
Psmc3 3975
Sec61g 3713
Psmb7 3709
Psmd7 3606
Tap2 3593
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Sec61a1 2901
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Calr 2461
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Lnpep 993
Psmd3 928
Sec61a2 568
Itgb5 129
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Cd36 -1230
Rps27a -1248
Psma2 -1441
Itgav -2555
Psme1 -2898
Sec61b -3533
Pdia3 -3877
Mrc2 -4223



REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION

REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION
178
set REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION
setSize 22
pANOVA 0.00135
s.dist 0.395
p.adjustANOVA 0.0115



Top enriched genes

Top 20 genes
GeneID Gene Rank
Eprs 4636
Tars 4567
Lars 4566
Rars 4458
Aars 3807
Farsb 3655
Aimp2 3522
Nars 3338
Qars 3271
Aimp1 2179
Cars 2030
Sars 1773
Gars 1590
Ppa1 1413
Iars 1336
Yars 976
Vars 749
Wars -871
Dars -969
Kars -1623

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Eprs 4636
Tars 4567
Lars 4566
Rars 4458
Aars 3807
Farsb 3655
Aimp2 3522
Nars 3338
Qars 3271
Aimp1 2179
Cars 2030
Sars 1773
Gars 1590
Ppa1 1413
Iars 1336
Yars 976
Vars 749
Wars -871
Dars -969
Kars -1623
Hars -1850
Farsa -2318



REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C

REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C
415
set REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C
setSize 53
pANOVA 6.93e-07
s.dist 0.395
p.adjustANOVA 2.7e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Cdc26 2233
Ube2e1 2008
Psma6 1945
Psmd6 1849
Anapc2 1831
Ube2c 1566
Psmd5 1427
Psmd14 1216
Anapc5 1205
Psmb1 1183
Psma7 1165
Cdc16 1112
Psmd3 928
Anapc11 885
Ube2d1 657
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Anapc10 -2693
Anapc7 -2719
Cdc27 -2753
Psme1 -2898



REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS

REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS
169
set REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS
setSize 11
pANOVA 0.0251
s.dist -0.39
p.adjustANOVA 0.104



Top enriched genes

Top 20 genes
GeneID Gene Rank
Aplnr -4268
Cxcl12 -4167
Ednrb -3596
F2r -3039
Agt -2999
Ccl25 -2653
Ccl27a -2327
Anxa1 -763
Ccl11 -452
App 1284
C3 2856

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Aplnr -4268
Cxcl12 -4167
Ednrb -3596
F2r -3039
Agt -2999
Ccl25 -2653
Ccl27a -2327
Anxa1 -763
Ccl11 -452
App 1284
C3 2856



REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE

REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE
196
set REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE
setSize 46
pANOVA 6.23e-06
s.dist 0.385
p.adjustANOVA 0.000133



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Atm 1039
Psmd3 928
Trp53 904
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Cdkn1b -2590
Psme1 -2898
Mdm2 -3214
Ccne2 -3785



REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1

REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1
412
set REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1
setSize 56
pANOVA 6.29e-07
s.dist 0.385
p.adjustANOVA 2.68e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Cdc26 2233
Ube2e1 2008
Psma6 1945
Psmd6 1849
Anapc2 1831
Ube2c 1566
Psmd5 1427
Psmd14 1216
Anapc5 1205
Psmb1 1183
Psma7 1165
Cdc16 1112
Psmd3 928
Anapc11 885
Ube2d1 657
Pttg1 527
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Aurka -1930
Anapc10 -2693
Anapc7 -2719
Cdc27 -2753
Psme1 -2898



REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS

REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS
171
set REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS
setSize 17
pANOVA 0.00614
s.dist -0.384
p.adjustANOVA 0.0359



Top enriched genes

Top 20 genes
GeneID Gene Rank
S1pr1 -4663
Lpar1 -4537
Aplnr -4268
Cxcl12 -4167
P2ry2 -3810
Ednrb -3596
F2r -3039
Agt -2999
Ccl25 -2653
Adrb2 -2373
Ccl27a -2327
Anxa1 -763
Ccl11 -452
App 1284
P2ry1 1764
C3 2856
Lpar6 3150

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
S1pr1 -4663
Lpar1 -4537
Aplnr -4268
Cxcl12 -4167
P2ry2 -3810
Ednrb -3596
F2r -3039
Agt -2999
Ccl25 -2653
Adrb2 -2373
Ccl27a -2327
Anxa1 -763
Ccl11 -452
App 1284
P2ry1 1764
C3 2856
Lpar6 3150



REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE

REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE
299
set REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE
setSize 60
pANOVA 2.98e-07
s.dist 0.383
p.adjustANOVA 1.76e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Cdc14a 4657
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Cdc14a 4657
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Cdc26 2233
Ube2e1 2008
Psma6 1945
Psmd6 1849
Anapc2 1831
Ube2c 1566
Psmd5 1427
Psmd14 1216
Anapc5 1205
Psmb1 1183
Psma7 1165
Cdc16 1112
Cul1 1053
Psmd3 928
Anapc11 885
Ube2d1 657
Pttg1 527
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Aurka -1930
Anapc10 -2693
Anapc7 -2719
Cdc27 -2753
Psme1 -2898
Bub3 -3122



REACTOME_NCAM1_INTERACTIONS

REACTOME_NCAM1_INTERACTIONS
230
set REACTOME_NCAM1_INTERACTIONS
setSize 15
pANOVA 0.0105
s.dist 0.382
p.adjustANOVA 0.0558



Top enriched genes

Top 20 genes
GeneID Gene Rank
Col1a2 4615
Nrtn 4581
Col6a1 4540
Col5a2 4414
Col3a1 4358
Col6a2 3458
Col5a1 3388
Col1a1 1723
Col6a3 1666
Prnp 1580
Col4a2 421
Col4a1 -409
Cacnb1 -1375
Cacna1s -2636
Agrn -3781

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Col1a2 4615
Nrtn 4581
Col6a1 4540
Col5a2 4414
Col3a1 4358
Col6a2 3458
Col5a1 3388
Col1a1 1723
Col6a3 1666
Prnp 1580
Col4a2 421
Col4a1 -409
Cacnb1 -1375
Cacna1s -2636
Agrn -3781



REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS

REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS
414
set REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS
setSize 56
pANOVA 8.53e-07
s.dist 0.381
p.adjustANOVA 2.85e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Anapc1 4389
Psmc3 3975
Anapc4 3890
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Cdc23 3236
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Cdc26 2233
Ube2e1 2008
Psma6 1945
Psmd6 1849
Anapc2 1831
Ube2c 1566
Psmd5 1427
Psmd14 1216
Anapc5 1205
Psmb1 1183
Psma7 1165
Cdc16 1112
Psmd3 928
Anapc11 885
Ube2d1 657
Pttg1 527
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Anapc10 -2693
Anapc7 -2719
Cdc27 -2753
Psme1 -2898
Bub3 -3122



REACTOME_POTASSIUM_CHANNELS

REACTOME_POTASSIUM_CHANNELS
447
set REACTOME_POTASSIUM_CHANNELS
setSize 22
pANOVA 0.00259
s.dist -0.371
p.adjustANOVA 0.0186



Top enriched genes

Top 20 genes
GeneID Gene Rank
Kcnj2 -4478
Gnb1 -4381
Kcnc3 -3683
Kcnq4 -3622
Kcnn1 -3590
Kcnj8 -3575
Kcng4 -3316
Kcnq5 -3243
Gnb2 -3171
Kcnc1 -3054
Gabbr1 -2843
Kcna7 -2551
Kcnf1 -2289
Kcnj11 -1483
Kcnc4 -1343
Gng5 -1318
Kcnb1 -788
Abcc9 291
Kcnj12 475
Gng12 1918

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Kcnj2 -4478
Gnb1 -4381
Kcnc3 -3683
Kcnq4 -3622
Kcnn1 -3590
Kcnj8 -3575
Kcng4 -3316
Kcnq5 -3243
Gnb2 -3171
Kcnc1 -3054
Gabbr1 -2843
Kcna7 -2551
Kcnf1 -2289
Kcnj11 -1483
Kcnc4 -1343
Gng5 -1318
Kcnb1 -788
Abcc9 291
Kcnj12 475
Gng12 1918
Gng10 3301
Kcnab1 4479



REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0

REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0
373
set REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0
setSize 45
pANOVA 1.74e-05
s.dist 0.371
p.adjustANOVA 0.00028



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Eif4g1 2401
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Uba52 -285
Hspa8 -456
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Hnrnpd -2254
Psme1 -2898
Hspb1 -4323
Hspa1b -4483



REACTOME_M_G1_TRANSITION

REACTOME_M_G1_TRANSITION
214
set REACTOME_M_G1_TRANSITION
setSize 51
pANOVA 4.89e-06
s.dist 0.37
p.adjustANOVA 0.00012



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Gmnn 2820
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Orc5 2150
Orc4 2125
Mcm2 2006
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Mcm7 999
Psmd3 928
Rpa1 669
Psmb4 31
Uba52 -285
Rpa2 -393
Orc2 -517
Orc3 -613
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Psme1 -2898
Pola2 -3981
E2f3 -4225



REACTOME_SIGNALING_BY_NOTCH2

REACTOME_SIGNALING_BY_NOTCH2
72
set REACTOME_SIGNALING_BY_NOTCH2
setSize 11
pANOVA 0.0354
s.dist -0.366
p.adjustANOVA 0.136



Top enriched genes

Top 20 genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Psen2 182
Psen1 388
Notch2 2303

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Adam10 -4007
Aph1b -3705
Jag2 -3570
Ncstn -3211
Dll4 -3189
Jag1 -2545
Psenen -1249
Aph1a -301
Psen2 182
Psen1 388
Notch2 2303



REACTOME_REGULATION_OF_APOPTOSIS

REACTOME_REGULATION_OF_APOPTOSIS
156
set REACTOME_REGULATION_OF_APOPTOSIS
setSize 48
pANOVA 1.39e-05
s.dist 0.363
p.adjustANOVA 0.00024



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Unc5a 3730
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Dapk1 2918
Psmb5 2694
Psmd10 2684

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Unc5a 3730
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Dapk1 2918
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Psmd3 928
Psmb4 31
Uba52 -285
Dapk2 -459
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Appl1 -1803
Dapk3 -2219
Arhgap10 -2402
Maged1 -2494
Psme1 -2898
Pak2 -2964



REACTOME_SEMA3A_PAK_DEPENDENT_AXON_REPULSION

REACTOME_SEMA3A_PAK_DEPENDENT_AXON_REPULSION
251
set REACTOME_SEMA3A_PAK_DEPENDENT_AXON_REPULSION
setSize 10
pANOVA 0.0474
s.dist -0.362
p.adjustANOVA 0.165



Top enriched genes

Top 20 genes
GeneID Gene Rank
Hsp90aa1 -3978
Nrp1 -3867
Plxna2 -3771
Fyn -2995
Pak2 -2964
Plxna1 -1163
Pak1 -873
Rac1 -252
Cfl1 1350
Hsp90ab1 1523

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Hsp90aa1 -3978
Nrp1 -3867
Plxna2 -3771
Fyn -2995
Pak2 -2964
Plxna1 -1163
Pak1 -873
Rac1 -252
Cfl1 1350
Hsp90ab1 1523



REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS

REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS
68
set REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS
setSize 53
pANOVA 9.18e-06
s.dist 0.353
p.adjustANOVA 0.000172



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Btrc 3826
Bcl10 3733
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Btrc 3826
Bcl10 3733
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Ikbkb 2021
Psma6 1945
Fbxw11 1934
Rela 1888
Psmd6 1849
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cul1 1053
Psmd3 928
Chuk 173
Ikbkg 41
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Nfkbib -1936
Psme1 -2898
Nfkbia -2910
Rel -3113
Map3k7 -3155
Malt1 -3461



REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING

REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING
32
set REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING
setSize 18
pANOVA 0.0108
s.dist -0.347
p.adjustANOVA 0.056



Top enriched genes

Top 20 genes
GeneID Gene Rank
Fgf2 -4518
Spry2 -4075
Fgf6 -3982
Mapk3 -3203
Fgfr1 -3163
Braf -2822
Fgfr3 -2384
Ppp2r1a -2213
Frs2 -2062
Cbl -1558
Grb2 -1540
Mapk1 -1516
Rps27a -1248
Mknk1 -408
Uba52 -285
Fgf1 1167
Ppp2ca 1474
Ppp2cb 3025

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Fgf2 -4518
Spry2 -4075
Fgf6 -3982
Mapk3 -3203
Fgfr1 -3163
Braf -2822
Fgfr3 -2384
Ppp2r1a -2213
Frs2 -2062
Cbl -1558
Grb2 -1540
Mapk1 -1516
Rps27a -1248
Mknk1 -408
Uba52 -285
Fgf1 1167
Ppp2ca 1474
Ppp2cb 3025



REACTOME_COMPLEMENT_CASCADE

REACTOME_COMPLEMENT_CASCADE
430
set REACTOME_COMPLEMENT_CASCADE
setSize 11
pANOVA 0.0512
s.dist 0.34
p.adjustANOVA 0.175



Top enriched genes

Top 20 genes
GeneID Gene Rank
C1qc 4597
C1qa 4588
Cd46 4516
C1qb 4219
C3 2856
C4b 1987
Cr1l 1017
Cfd 380
Pros1 -1550
C7 -2299
C1s1 -3001

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
C1qc 4597
C1qa 4588
Cd46 4516
C1qb 4219
C3 2856
C4b 1987
Cr1l 1017
Cfd 380
Pros1 -1550
C7 -2299
C1s1 -3001



REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_

REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_
194
set REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_
setSize 50
pANOVA 4.31e-05
s.dist 0.335
p.adjustANOVA 0.00065



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psmc3 3975
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Bmyc 2120
Psma6 1945
Psmd6 1849
Ccnh 1551
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cdc25a 1158
Cul1 1053
Psmd3 928
Cdk7 404
Psmb4 31
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Rb1 -1562
Mnat1 -1709
Cdkn1b -2590
Psme1 -2898
Ccne2 -3785
Max -4519



REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS

REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS
270
set REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS
setSize 15
pANOVA 0.0254
s.dist -0.334
p.adjustANOVA 0.104



Top enriched genes

Top 20 genes
GeneID Gene Rank
Slc16a10 -4670
Slc38a2 -4594
Slc43a1 -4444
Slc6a6 -4373
Slc38a4 -4282
Slc38a3 -3685
Slc15a2 -2395
Slc15a4 -2328
Slc3a2 -1898
Slc43a2 -900
Slc36a1 510
Slc7a8 1133
Slc7a6 1156
Slc1a5 2814
Slc7a2 4486

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Slc16a10 -4670
Slc38a2 -4594
Slc43a1 -4444
Slc6a6 -4373
Slc38a4 -4282
Slc38a3 -3685
Slc15a2 -2395
Slc15a4 -2328
Slc3a2 -1898
Slc43a2 -900
Slc36a1 510
Slc7a8 1133
Slc7a6 1156
Slc1a5 2814
Slc7a2 4486



REACTOME_SYNTHESIS_OF_DNA

REACTOME_SYNTHESIS_OF_DNA
274
set REACTOME_SYNTHESIS_OF_DNA
setSize 61
pANOVA 6.87e-06
s.dist 0.333
p.adjustANOVA 0.00014



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Pold1 4533
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Pold3 3638
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Pold1 4533
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Psmb7 3709
Pold3 3638
Psmd7 3606
Psmc4 3591
Psma5 3558
Cdkn1a 3415
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Gins2 2480
Psmc6 2477
Pold2 2278
Psmc2 2272
Orc5 2150
Orc4 2125
Mcm2 2006
Psma6 1945
Psmd6 1849
Rfc2 1790
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Mcm7 999
Psmd3 928
Rpa1 669
Psmb4 31
Pcna -167
Uba52 -285
Rpa2 -393
Orc2 -517
Orc3 -613
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Gins4 -1510
Rb1 -1562
Cdkn1b -2590
Pold4 -2779
Psme1 -2898
Pola2 -3981
Rfc4 -4380



REACTOME_GLUCOSE_METABOLISM

REACTOME_GLUCOSE_METABOLISM
435
set REACTOME_GLUCOSE_METABOLISM
setSize 43
pANOVA 0.000174
s.dist 0.331
p.adjustANOVA 0.00232



Top enriched genes

Top 20 genes
GeneID Gene Rank
Pfkfb4 4634
Pgk1 4587
Pcx 4568
Pfkfb1 4411
Phka1 4400
Agl 4381
Phkb 4377
Eno3 4362
Fbp2 4341
Phka2 4305
Eno1 4244
Pygm 4193
Gpi1 3899
Phkg1 3814
Mdh1 3335
Phkg2 3164
Ppp2cb 3025
Pfkfb2 2951
Pgm1 2888
Pfkm 2853

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Pfkfb4 4634
Pgk1 4587
Pcx 4568
Pfkfb1 4411
Phka1 4400
Agl 4381
Phkb 4377
Eno3 4362
Fbp2 4341
Phka2 4305
Eno1 4244
Pygm 4193
Gpi1 3899
Phkg1 3814
Mdh1 3335
Phkg2 3164
Ppp2cb 3025
Pfkfb2 2951
Pgm1 2888
Pfkm 2853
Gyg 2567
Slc25a12 2098
Tpi1 1985
Ugp2 1869
Gbe1 1815
Prkacb 1528
Ppp2ca 1474
Ppp2r5d 606
Calm1 -190
Mdh2 -555
Pfkfb3 -561
Slc25a11 -1121
Gys1 -1223
Got2 -1281
Pgam1 -1864
Ppp2r1b -2072
Prkaca -2089
Ppp2r1a -2213
Pgam2 -2214
Pygb -2481
Pfkp -2749
Pfkl -2961
Got1 -3342



REACTOME_GPCR_LIGAND_BINDING

REACTOME_GPCR_LIGAND_BINDING
309
set REACTOME_GPCR_LIGAND_BINDING
setSize 42
pANOVA 0.000212
s.dist -0.331
p.adjustANOVA 0.00276



Top enriched genes

Top 20 genes
GeneID Gene Rank
S1pr1 -4663
Crhr2 -4588
Lpar1 -4537
Ramp1 -4436
Fzd4 -4416
Gnb1 -4381
Wnt5a -4274
Aplnr -4268
Cxcl12 -4167
P2ry2 -3810
Ednrb -3596
Fzd7 -3499
Wnt9a -3267
Sctr -3245
Wnt11 -3172
Gnb2 -3171
F2r -3039
Gnb4 -3034
Agt -2999
Gabbr1 -2843

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
S1pr1 -4663
Crhr2 -4588
Lpar1 -4537
Ramp1 -4436
Fzd4 -4416
Gnb1 -4381
Wnt5a -4274
Aplnr -4268
Cxcl12 -4167
P2ry2 -3810
Ednrb -3596
Fzd7 -3499
Wnt9a -3267
Sctr -3245
Wnt11 -3172
Gnb2 -3171
F2r -3039
Gnb4 -3034
Agt -2999
Gabbr1 -2843
Ccl25 -2653
Ramp2 -2509
Adrb2 -2373
Gnb5 -2348
Ccl27a -2327
Gnas -1853
Gng5 -1318
Anxa1 -763
Casr -669
Ccl11 -452
Gng11 -402
Fzd9 400
Calcrl 779
App 1284
P2ry1 1764
Gng12 1918
C3 2856
Lpar6 3150
Gng10 3301
Fzd6 3625
Ptch1 4460
Wnt4 4578



REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS

REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS
243
set REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS
setSize 20
pANOVA 0.0108
s.dist -0.33
p.adjustANOVA 0.056



Top enriched genes

Top 20 genes
GeneID Gene Rank
Pigx -4574
Sema6d -4043
Pigv -3345
Pigm -3274
Pigb -3269
Pigt -2862
Dpm3 -2734
Pigw -2460
Pign -2287
Gpaa1 -2149
Dpm2 -1587
Pigk -1439
Pigg -1373
Pigu -1335
Pigc -912
Pigp -648
Pigo -424
Pigq 1864
Gm20716 1996
Pigs 3944

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Pigx -4574
Sema6d -4043
Pigv -3345
Pigm -3274
Pigb -3269
Pigt -2862
Dpm3 -2734
Pigw -2460
Pign -2287
Gpaa1 -2149
Dpm2 -1587
Pigk -1439
Pigg -1373
Pigu -1335
Pigc -912
Pigp -648
Pigo -424
Pigq 1864
Gm20716 1996
Pigs 3944



REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS

REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS
257
set REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS
setSize 24
pANOVA 0.00538
s.dist -0.328
p.adjustANOVA 0.0332



Top enriched genes

Top 20 genes
GeneID Gene Rank
Slc2a1 -4409
Slc6a6 -4373
Slc30a5 -3998
Slc30a1 -3988
Slc2a8 -3891
Slc2a3 -3875
Slc39a1 -3322
Slc44a1 -3178
Slc22a5 -3066
Slc47a1 -2767
Slc30a2 -2596
Cp -2591
Slc41a1 -1613
Slc30a7 -1018
Slc2a4 -706
Slc40a1 -699
Slc2a12 -579
Slc44a2 -192
Slc16a1 234
Slc31a1 841

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Slc2a1 -4409
Slc6a6 -4373
Slc30a5 -3998
Slc30a1 -3988
Slc2a8 -3891
Slc2a3 -3875
Slc39a1 -3322
Slc44a1 -3178
Slc22a5 -3066
Slc47a1 -2767
Slc30a2 -2596
Cp -2591
Slc41a1 -1613
Slc30a7 -1018
Slc2a4 -706
Slc40a1 -699
Slc2a12 -579
Slc44a2 -192
Slc16a1 234
Slc31a1 841
Slc39a7 1174
Slc16a3 2290
Slc39a3 2405
Slc39a10 2978



REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS

REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS
313
set REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS
setSize 17
pANOVA 0.0194
s.dist -0.328
p.adjustANOVA 0.0849



Top enriched genes

Top 20 genes
GeneID Gene Rank
Gnb1 -4381
Gnaq -3325
Mapk3 -3203
Gnb2 -3171
F2r -3039
Gnb4 -3034
Arrb1 -2665
Gna11 -2568
Gna12 -2449
Gnb5 -2348
Gna13 -1528
Mapk1 -1516
Gng5 -1318
Gng11 -402
Gng12 1918
Gng10 3301
Arrb2 3602

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Gnb1 -4381
Gnaq -3325
Mapk3 -3203
Gnb2 -3171
F2r -3039
Gnb4 -3034
Arrb1 -2665
Gna11 -2568
Gna12 -2449
Gnb5 -2348
Gna13 -1528
Mapk1 -1516
Gng5 -1318
Gng11 -402
Gng12 1918
Gng10 3301
Arrb2 3602



REACTOME_THROMBOXANE_SIGNALLING_THROUGH_TP_RECEPTOR

REACTOME_THROMBOXANE_SIGNALLING_THROUGH_TP_RECEPTOR
288
set REACTOME_THROMBOXANE_SIGNALLING_THROUGH_TP_RECEPTOR
setSize 11
pANOVA 0.0609
s.dist -0.326
p.adjustANOVA 0.193



Top enriched genes

Top 20 genes
GeneID Gene Rank
Gnb1 -4381
Gnaq -3325
Gnb2 -3171
Gnb4 -3034
Gna11 -2568
Gnb5 -2348
Gna13 -1528
Gng5 -1318
Gng11 -402
Gng12 1918
Gng10 3301

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Gnb1 -4381
Gnaq -3325
Gnb2 -3171
Gnb4 -3034
Gna11 -2568
Gnb5 -2348
Gna13 -1528
Gng5 -1318
Gng11 -402
Gng12 1918
Gng10 3301



REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1

REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1
226
set REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE1
setSize 20
pANOVA 0.0116
s.dist -0.326
p.adjustANOVA 0.0584



Top enriched genes

Top 20 genes
GeneID Gene Rank
Rapgef3 -4623
Gnb1 -4381
Iqgap1 -3787
Itpr2 -3745
Gnb2 -3171
Gnb4 -3034
Adcy6 -2533
Gnb5 -2348
Prkar1a -2321
Prkaca -2089
Gnas -1853
Prkar2a -1614
Gng5 -1318
Kcnb1 -788
Gng11 -402
Rap1a -111
Rap1b 784
Prkacb 1528
Gng12 1918
Gng10 3301

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Rapgef3 -4623
Gnb1 -4381
Iqgap1 -3787
Itpr2 -3745
Gnb2 -3171
Gnb4 -3034
Adcy6 -2533
Gnb5 -2348
Prkar1a -2321
Prkaca -2089
Gnas -1853
Prkar2a -1614
Gng5 -1318
Kcnb1 -788
Gng11 -402
Rap1a -111
Rap1b 784
Prkacb 1528
Gng12 1918
Gng10 3301



REACTOME_SIGNALING_BY_WNT

REACTOME_SIGNALING_BY_WNT
13
set REACTOME_SIGNALING_BY_WNT
setSize 56
pANOVA 2.6e-05
s.dist 0.325
p.adjustANOVA 0.000406



Top enriched genes

Top 20 genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Ctnnb1 3934
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Ppp2cb 3025
Psmd11 3011
Psmb5 2694

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Psmd9 4557
Psmd1 4542
Psmd2 4526
Psmc1 4518
Psma1 4465
Psme4 4444
Psmc3 3975
Ctnnb1 3934
Btrc 3826
Psmb7 3709
Psmd7 3606
Psmc4 3591
Psma5 3558
Psmb3 3341
Psmb6 3260
Psmd13 3187
Psmb2 3126
Ppp2cb 3025
Psmd11 3011
Psmb5 2694
Psmd10 2684
Psma4 2636
Psmd4 2622
Psmd12 2603
Psmc5 2576
Psma3 2518
Psmc6 2477
Psmc2 2272
Psma6 1945
Psmd6 1849
Frat2 1499
Ppp2ca 1474
Psmd5 1427
Psmd14 1216
Psmb1 1183
Psma7 1165
Cul1 1053
Psmd3 928
Csnk1a1 773
Ppp2r5d 606
Ppp2r5e 601
Psmb4 31
Ppp2r5a -115
Uba52 -285
Psmd8 -625
Psmf1 -783
Psmb10 -830
Rps27a -1248
Psma2 -1441
Ppp2r1b -2072
Ppp2r1a -2213
Apc -2703
Ppp2r5c -2823
Psme1 -2898
Axin1 -4468
Ppp2r5b -4539



REACTOME_GLUCONEOGENESIS

REACTOME_GLUCONEOGENESIS
174
set REACTOME_GLUCONEOGENESIS
setSize 18
pANOVA 0.0178
s.dist 0.323
p.adjustANOVA 0.0824



Top enriched genes

Top 20 genes
GeneID Gene Rank
Pgk1 4587
Pcx 4568
Pfkfb1 4411
Eno3 4362
Fbp2 4341
Eno1 4244
Gpi1 3899
Mdh1 3335
Slc25a12 2098
Tpi1 1985
Prkacb 1528
Mdh2 -555
Slc25a11 -1121
Got2 -1281
Pgam1 -1864
Prkaca -2089
Pgam2 -2214
Got1 -3342

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Pgk1 4587
Pcx 4568
Pfkfb1 4411
Eno3 4362
Fbp2 4341
Eno1 4244
Gpi1 3899
Mdh1 3335
Slc25a12 2098
Tpi1 1985
Prkacb 1528
Mdh2 -555
Slc25a11 -1121
Got2 -1281
Pgam1 -1864
Prkaca -2089
Pgam2 -2214
Got1 -3342



REACTOME_SIGNAL_AMPLIFICATION

REACTOME_SIGNAL_AMPLIFICATION
277
set REACTOME_SIGNAL_AMPLIFICATION
setSize 15
pANOVA 0.0325
s.dist -0.319
p.adjustANOVA 0.127



Top enriched genes

Top 20 genes
GeneID Gene Rank
Gnb1 -4381
Gnai3 -3866
Gnaq -3325
Gnb2 -3171
Gnb4 -3034
Gna11 -2568
Mapk14 -2526
Gnb5 -2348
Gna13 -1528
Gng5 -1318
Gnai2 -974
Gng11 -402
P2ry1 1764
Gng12 1918
Gng10 3301

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
Gnb1 -4381
Gnai3 -3866
Gnaq -3325
Gnb2 -3171
Gnb4 -3034
Gna11 -2568
Mapk14 -2526
Gnb5 -2348
Gna13 -1528
Gng5 -1318
Gnai2 -974
Gng11 -402
P2ry1 1764
Gng12 1918
Gng10 3301



Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.2.1 (2022-06-23)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 22.04.1 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
## LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats4    stats     graphics  grDevices utils     datasets  methods  
## [8] base     
## 
## other attached packages:
##  [1] plyr_1.8.7                  pkgload_1.3.0              
##  [3] GGally_2.1.2                gtools_3.9.2.2             
##  [5] echarts4r_0.4.4             beeswarm_0.4.0             
##  [7] vioplot_0.3.7               sm_2.2-5.7                 
##  [9] kableExtra_1.3.4            topconfects_1.12.0         
## [11] limma_3.52.1                eulerr_6.1.1               
## [13] mitch_1.8.0                 MASS_7.3-58                
## [15] fgsea_1.22.0                gplots_3.1.3               
## [17] DESeq2_1.36.0               SummarizedExperiment_1.26.1
## [19] Biobase_2.56.0              MatrixGenerics_1.8.0       
## [21] matrixStats_0.62.0          GenomicRanges_1.48.0       
## [23] GenomeInfoDb_1.32.2         IRanges_2.30.0             
## [25] S4Vectors_0.34.0            BiocGenerics_0.42.0        
## [27] reshape2_1.4.4              forcats_0.5.1              
## [29] stringr_1.4.0               dplyr_1.0.9                
## [31] purrr_0.3.4                 readr_2.1.2                
## [33] tidyr_1.2.0                 tibble_3.1.7               
## [35] ggplot2_3.3.6               tidyverse_1.3.1            
## [37] zoo_1.8-10                 
## 
## loaded via a namespace (and not attached):
##   [1] readxl_1.4.0           backports_1.4.1        fastmatch_1.1-3       
##   [4] systemfonts_1.0.4      splines_4.2.1          BiocParallel_1.30.3   
##   [7] digest_0.6.29          htmltools_0.5.2        fansi_1.0.3           
##  [10] magrittr_2.0.3         memoise_2.0.1          tzdb_0.3.0            
##  [13] Biostrings_2.64.0      annotate_1.74.0        modelr_0.1.8          
##  [16] svglite_2.1.0          prettyunits_1.1.1      colorspace_2.0-3      
##  [19] blob_1.2.3             rvest_1.0.2            haven_2.5.0           
##  [22] xfun_0.31              crayon_1.5.1           RCurl_1.98-1.7        
##  [25] jsonlite_1.8.0         genefilter_1.78.0      survival_3.4-0        
##  [28] glue_1.6.2             gtable_0.3.0           zlibbioc_1.42.0       
##  [31] XVector_0.36.0         webshot_0.5.3          DelayedArray_0.22.0   
##  [34] scales_1.2.0           DBI_1.1.3              Rcpp_1.0.8.3          
##  [37] viridisLite_0.4.0      xtable_1.8-4           progress_1.2.2        
##  [40] bit_4.0.4              htmlwidgets_1.5.4      httr_1.4.3            
##  [43] RColorBrewer_1.1-3     ellipsis_0.3.2         pkgconfig_2.0.3       
##  [46] reshape_0.8.9          XML_3.99-0.10          farver_2.1.0          
##  [49] sass_0.4.1             dbplyr_2.2.1           locfit_1.5-9.5        
##  [52] utf8_1.2.2             tidyselect_1.1.2       labeling_0.4.2        
##  [55] rlang_1.0.3            later_1.3.0            AnnotationDbi_1.58.0  
##  [58] munsell_0.5.0          cellranger_1.1.0       tools_4.2.1           
##  [61] cachem_1.0.6           cli_3.3.0              generics_0.1.2        
##  [64] RSQLite_2.2.14         broom_0.8.0            evaluate_0.15         
##  [67] fastmap_1.1.0          yaml_2.3.5             knitr_1.39            
##  [70] bit64_4.0.5            fs_1.5.2               caTools_1.18.2        
##  [73] KEGGREST_1.36.2        mime_0.12              xml2_1.3.3            
##  [76] compiler_4.2.1         rstudioapi_0.13        png_0.1-7             
##  [79] reprex_2.0.1           geneplotter_1.74.0     bslib_0.3.1           
##  [82] stringi_1.7.6          highr_0.9              lattice_0.20-45       
##  [85] Matrix_1.4-1           vctrs_0.4.1            pillar_1.7.0          
##  [88] lifecycle_1.0.1        jquerylib_0.1.4        data.table_1.14.2     
##  [91] bitops_1.0-7           httpuv_1.6.5           R6_2.5.1              
##  [94] promises_1.2.0.1       KernSmooth_2.23-20     gridExtra_2.3         
##  [97] codetools_0.2-18       assertthat_0.2.1       withr_2.5.0           
## [100] GenomeInfoDbData_1.2.8 parallel_4.2.1         hms_1.1.1             
## [103] grid_4.2.1             rmarkdown_2.14         shiny_1.7.1           
## [106] lubridate_1.8.0

END of report