date generated: 2021-02-24

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                    S93         S94        S80
## 1MMP        -1.5495775 -0.31414186 -1.6914974
## 2-Cys       -0.4432162 -0.11180293  0.2422841
## 2A6         -0.2828189 -2.81239549 -4.3099483
## 2MMP        -1.1292953  0.34905413 -0.1045382
## 3AT1         0.3590878 -0.01657812 -1.6059308
## 3BETAHSD/D1  0.3717336  0.16949821  0.2243517
Here are some metrics about the input data profile:
Profile metrics
Profile metrics
num_genes_in_profile 21283
duplicated_genes_present 0
num_profile_genes_in_sets 20349
num_profile_genes_not_in_sets 934

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: ../baseline/ref/Ath_AGI_LOCUS_TAIR10_Aug2012.txt.gmt
Gene sets metrics
Gene sets metrics
num_genesets 959
num_genesets_excluded 694
num_genesets_included 265
Genes by sector
S93 S94 S80 Count
1 -1 -1 -1 4957
2 1 -1 -1 2365
3 -1 0 -1 1
4 -1 1 -1 1390
5 1 1 -1 2076
6 1 -1 0 1
7 -1 -1 1 1668
8 1 -1 1 1222
9 -1 1 1 2562
10 0 1 1 1
11 1 1 1 5040
Number of significant gene sets (FDR<0.05)= 140

Gene sets by sector


Gene sets by sector
s.S93 s.S94 s.S80 Count
1 -1 -1 -1 36
2 1 -1 -1 19
3 -1 1 -1 19
4 1 1 -1 8
5 -1 -1 1 3
6 1 -1 1 9
7 -1 1 1 16
8 1 1 1 30

Interactive enrichment scatterplot

All sets with FDR<0.05. Try hovering over the points.

Top N sets irrespective of FDR. Try hovering over the points.

A heatmap of S values for top results


A plot of effect size versus significance


Significance is the -log2(p.adjustMANOVA) and effect size is the s.dist which is the hypotenuse of the s scores.

Results table

Top N= 50 gene sets
set setSize pMANOVA p.adjustMANOVA s.dist s.S93 s.S94 s.S80 p.S93 p.S94 p.S80
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP2 10 7.38e-05 3.58e-04 1.090 -0.27300 -0.69100 -0.8000 1.35e-01 1.55e-04 1.17e-05
REDOX THIOREDOXIN PDIL 13 5.57e-05 3.01e-04 1.040 0.49200 0.63800 0.6510 2.13e-03 6.81e-05 4.79e-05
CELL WALL CELL WALL PROTEINS HRGP 14 2.30e-06 2.03e-05 1.020 -0.19600 -0.60400 -0.8030 2.05e-01 9.06e-05 1.92e-07
TRANSPORT MAJOR INTRINSIC PROTEINS PIP 13 2.55e-04 1.09e-03 0.960 0.44800 0.60700 0.5950 5.16e-03 1.52e-04 2.04e-04
DEVELOPMENT LATE EMBRYOGENESIS ABUNDANT 18 7.43e-05 3.58e-04 0.822 0.21900 0.53300 0.5850 1.08e-01 8.91e-05 1.70e-05
CELL WALL CELLULOSE SYNTHESIS 14 4.83e-07 6.40e-06 0.801 0.52600 0.59300 -0.1160 6.48e-04 1.23e-04 4.51e-01
PROTEIN SYNTHESIS RIBOSOMAL RNA 15 6.13e-05 3.18e-04 0.789 0.68700 0.26200 0.2850 4.05e-06 7.94e-02 5.59e-02
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP 13 8.45e-04 2.91e-03 0.774 -0.06750 -0.55800 -0.5320 6.74e-01 4.92e-04 8.99e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 20 6.04e-07 7.62e-06 0.765 0.65200 0.16800 0.3630 4.49e-07 1.93e-01 4.99e-03
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 38 3.09e-10 1.02e-08 0.754 -0.03930 -0.51400 -0.5500 6.75e-01 4.13e-08 4.41e-09
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2A 14 6.41e-04 2.36e-03 0.722 0.55600 0.21800 0.4060 3.13e-04 1.57e-01 8.60e-03
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 37 1.23e-09 3.25e-08 0.721 -0.08240 -0.59200 -0.4030 3.86e-01 4.53e-10 2.20e-05
HORMONE METABOLISM JASMONATE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 13 1.34e-03 4.39e-03 0.721 0.39100 0.58100 0.1710 1.46e-02 2.87e-04 2.85e-01
PROTEIN TARGETING SECRETORY PATHWAY ER 14 6.59e-04 2.36e-03 0.718 0.45500 0.21900 0.5110 3.23e-03 1.55e-01 9.39e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C 10 1.81e-02 3.62e-02 0.709 0.46800 0.28400 0.4500 1.04e-02 1.20e-01 1.37e-02
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 16 7.99e-04 2.82e-03 0.692 -0.19500 -0.30700 -0.5880 1.77e-01 3.36e-02 4.59e-05
SIGNALLING 14-3-3 PROTEINS 11 7.32e-03 1.80e-02 0.682 0.45000 0.21100 0.4670 9.73e-03 2.27e-01 7.29e-03
CELL WALL CELL WALL PROTEINS LRR 17 1.04e-03 3.53e-03 0.680 -0.19300 -0.32800 -0.5630 1.68e-01 1.91e-02 5.86e-05
PS LIGHTREACTION PHOTOSYSTEM II LHC-II 14 4.62e-09 9.43e-08 0.680 0.18600 0.39500 -0.5210 2.28e-01 1.06e-02 7.37e-04
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY 16 2.60e-03 7.84e-03 0.675 -0.25100 -0.32400 -0.5360 8.19e-02 2.48e-02 2.05e-04
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 13 1.12e-04 5.20e-04 0.644 0.46200 0.00204 0.4480 3.90e-03 9.90e-01 5.18e-03
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 55 2.58e-08 4.27e-07 0.643 -0.27000 -0.37100 -0.4510 5.37e-04 1.89e-06 7.39e-09
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 33 1.34e-06 1.32e-05 0.643 0.49900 0.22200 0.3400 7.11e-07 2.73e-02 7.35e-04
RNA REGULATION OF TRANSCRIPTION AUX/IAA FAMILY 22 4.93e-05 2.72e-04 0.642 0.55800 0.31100 0.0666 5.80e-06 1.16e-02 5.89e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT X 12 2.63e-04 1.09e-03 0.634 -0.26400 0.48400 0.3120 1.13e-01 3.67e-03 6.15e-02
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS 16 1.33e-02 2.77e-02 0.626 0.22400 0.45400 0.3680 1.21e-01 1.66e-03 1.08e-02
PROTEIN SYNTHESIS ELONGATION 29 6.98e-06 5.14e-05 0.626 0.00226 0.45800 0.4270 9.83e-01 1.99e-05 6.90e-05
RNA REGULATION OF TRANSCRIPTION MADS BOX TRANSCRIPTION FACTOR FAMILY 28 1.53e-04 6.89e-04 0.625 -0.18300 -0.47800 -0.3590 9.45e-02 1.19e-05 1.02e-03
NOT ASSIGNED NO ONTOLOGY AGENET DOMAIN-CONTAINING PROTEIN 15 8.84e-03 2.02e-02 0.616 -0.46600 -0.24500 -0.3200 1.77e-03 1.00e-01 3.17e-02
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 29 2.72e-05 1.68e-04 0.614 -0.14400 -0.28800 -0.5230 1.80e-01 7.27e-03 1.07e-06
CELL WALL CELL WALL PROTEINS AGPS AGP 39 2.14e-14 1.89e-12 0.611 0.56600 -0.18900 -0.1320 9.50e-10 4.15e-02 1.55e-01
SIGNALLING RECEPTOR KINASES PROLINE EXTENSIN LIKE 15 7.79e-03 1.88e-02 0.604 -0.29400 -0.23100 -0.4740 4.83e-02 1.22e-01 1.47e-03
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 59 7.30e-10 2.15e-08 0.603 0.23700 0.25400 0.4930 1.63e-03 7.21e-04 5.63e-11
TRANSPORT CALCIUM 21 4.62e-06 3.72e-05 0.600 -0.24500 0.41800 0.3550 5.21e-02 9.15e-04 4.90e-03
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNAS 14 5.51e-03 1.46e-02 0.596 0.28900 0.17700 0.4910 6.11e-02 2.52e-01 1.48e-03
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNPS 14 2.86e-02 5.34e-02 0.590 0.39000 0.26500 0.3550 1.16e-02 8.57e-02 2.15e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE 10 6.94e-05 3.47e-04 0.589 0.45700 -0.34200 0.1450 1.23e-02 6.09e-02 4.28e-01
SIGNALLING RECEPTOR KINASES WHEAT LRK10 LIKE 12 3.45e-02 6.31e-02 0.584 -0.11200 -0.30200 -0.4870 5.03e-01 7.04e-02 3.49e-03
PROTEIN ASSEMBLY AND COFACTOR LIGATION 23 4.82e-04 1.88e-03 0.582 0.05370 0.30000 0.4950 6.56e-01 1.27e-02 3.91e-05
SECONDARY METABOLISM SIMPLE PHENOLS 16 8.45e-03 2.00e-02 0.578 -0.15700 -0.25900 -0.4930 2.78e-01 7.31e-02 6.44e-04
SIGNALLING RECEPTOR KINASES WALL ASSOCIATED KINASE 22 4.82e-03 1.29e-02 0.577 -0.41100 -0.30700 -0.2650 8.51e-04 1.28e-02 3.14e-02
PS LIGHTREACTION NADH DH 12 5.80e-04 2.17e-03 0.546 0.34200 -0.08220 0.4170 4.01e-02 6.22e-01 1.23e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION 12 3.61e-02 6.55e-02 0.546 0.38900 0.37600 0.0727 1.97e-02 2.42e-02 6.63e-01
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 15 3.49e-04 1.40e-03 0.545 -0.51600 0.05270 -0.1660 5.34e-04 7.24e-01 2.66e-01
RNA REGULATION OF TRANSCRIPTION SNF7 12 7.34e-02 1.18e-01 0.541 -0.22900 -0.43700 -0.2230 1.70e-01 8.83e-03 1.82e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) DOF ZINC FINGER FAMILY 31 9.10e-07 1.10e-05 0.534 0.23400 -0.26500 -0.4000 2.39e-02 1.07e-02 1.16e-04
RNA REGULATION OF TRANSCRIPTION PWWP DOMAIN PROTEIN 11 6.73e-03 1.71e-02 0.534 -0.17700 -0.03520 -0.5020 3.10e-01 8.40e-01 3.93e-03
RNA REGULATION OF TRANSCRIPTION CHROMATIN REMODELING FACTORS 35 1.01e-06 1.11e-05 0.533 -0.36700 -0.08090 -0.3780 1.74e-04 4.08e-01 1.07e-04
MINOR CHO METABOLISM CALLOSE 13 1.84e-05 1.16e-04 0.530 -0.25800 0.25100 -0.3890 1.07e-01 1.17e-01 1.52e-02
TRANSPORT NUCLEOTIDES 19 3.17e-02 5.84e-02 0.523 -0.28900 -0.27200 -0.3400 2.93e-02 3.98e-02 1.03e-02


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pMANOVA p.adjustMANOVA s.dist s.S93 s.S94 s.S80 p.S93 p.S94 p.S80
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP2 10 7.38e-05 3.58e-04 1.0900 -0.27300 -0.691000 -0.800000 1.35e-01 1.55e-04 1.17e-05
REDOX THIOREDOXIN PDIL 13 5.57e-05 3.01e-04 1.0400 0.49200 0.638000 0.651000 2.13e-03 6.81e-05 4.79e-05
CELL WALL CELL WALL PROTEINS HRGP 14 2.30e-06 2.03e-05 1.0200 -0.19600 -0.604000 -0.803000 2.05e-01 9.06e-05 1.92e-07
TRANSPORT MAJOR INTRINSIC PROTEINS PIP 13 2.55e-04 1.09e-03 0.9600 0.44800 0.607000 0.595000 5.16e-03 1.52e-04 2.04e-04
DEVELOPMENT LATE EMBRYOGENESIS ABUNDANT 18 7.43e-05 3.58e-04 0.8220 0.21900 0.533000 0.585000 1.08e-01 8.91e-05 1.70e-05
CELL WALL CELLULOSE SYNTHESIS 14 4.83e-07 6.40e-06 0.8010 0.52600 0.593000 -0.116000 6.48e-04 1.23e-04 4.51e-01
PROTEIN SYNTHESIS RIBOSOMAL RNA 15 6.13e-05 3.18e-04 0.7890 0.68700 0.262000 0.285000 4.05e-06 7.94e-02 5.59e-02
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP 13 8.45e-04 2.91e-03 0.7740 -0.06750 -0.558000 -0.532000 6.74e-01 4.92e-04 8.99e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 20 6.04e-07 7.62e-06 0.7650 0.65200 0.168000 0.363000 4.49e-07 1.93e-01 4.99e-03
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 38 3.09e-10 1.02e-08 0.7540 -0.03930 -0.514000 -0.550000 6.75e-01 4.13e-08 4.41e-09
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2A 14 6.41e-04 2.36e-03 0.7220 0.55600 0.218000 0.406000 3.13e-04 1.57e-01 8.60e-03
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 37 1.23e-09 3.25e-08 0.7210 -0.08240 -0.592000 -0.403000 3.86e-01 4.53e-10 2.20e-05
HORMONE METABOLISM JASMONATE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 13 1.34e-03 4.39e-03 0.7210 0.39100 0.581000 0.171000 1.46e-02 2.87e-04 2.85e-01
PROTEIN TARGETING SECRETORY PATHWAY ER 14 6.59e-04 2.36e-03 0.7180 0.45500 0.219000 0.511000 3.23e-03 1.55e-01 9.39e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C 10 1.81e-02 3.62e-02 0.7090 0.46800 0.284000 0.450000 1.04e-02 1.20e-01 1.37e-02
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 16 7.99e-04 2.82e-03 0.6920 -0.19500 -0.307000 -0.588000 1.77e-01 3.36e-02 4.59e-05
SIGNALLING 14-3-3 PROTEINS 11 7.32e-03 1.80e-02 0.6820 0.45000 0.211000 0.467000 9.73e-03 2.27e-01 7.29e-03
CELL WALL CELL WALL PROTEINS LRR 17 1.04e-03 3.53e-03 0.6800 -0.19300 -0.328000 -0.563000 1.68e-01 1.91e-02 5.86e-05
PS LIGHTREACTION PHOTOSYSTEM II LHC-II 14 4.62e-09 9.43e-08 0.6800 0.18600 0.395000 -0.521000 2.28e-01 1.06e-02 7.37e-04
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY 16 2.60e-03 7.84e-03 0.6750 -0.25100 -0.324000 -0.536000 8.19e-02 2.48e-02 2.05e-04
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 13 1.12e-04 5.20e-04 0.6440 0.46200 0.002040 0.448000 3.90e-03 9.90e-01 5.18e-03
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 55 2.58e-08 4.27e-07 0.6430 -0.27000 -0.371000 -0.451000 5.37e-04 1.89e-06 7.39e-09
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 33 1.34e-06 1.32e-05 0.6430 0.49900 0.222000 0.340000 7.11e-07 2.73e-02 7.35e-04
RNA REGULATION OF TRANSCRIPTION AUX/IAA FAMILY 22 4.93e-05 2.72e-04 0.6420 0.55800 0.311000 0.066600 5.80e-06 1.16e-02 5.89e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT X 12 2.63e-04 1.09e-03 0.6340 -0.26400 0.484000 0.312000 1.13e-01 3.67e-03 6.15e-02
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS 16 1.33e-02 2.77e-02 0.6260 0.22400 0.454000 0.368000 1.21e-01 1.66e-03 1.08e-02
PROTEIN SYNTHESIS ELONGATION 29 6.98e-06 5.14e-05 0.6260 0.00226 0.458000 0.427000 9.83e-01 1.99e-05 6.90e-05
RNA REGULATION OF TRANSCRIPTION MADS BOX TRANSCRIPTION FACTOR FAMILY 28 1.53e-04 6.89e-04 0.6250 -0.18300 -0.478000 -0.359000 9.45e-02 1.19e-05 1.02e-03
NOT ASSIGNED NO ONTOLOGY AGENET DOMAIN-CONTAINING PROTEIN 15 8.84e-03 2.02e-02 0.6160 -0.46600 -0.245000 -0.320000 1.77e-03 1.00e-01 3.17e-02
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 29 2.72e-05 1.68e-04 0.6140 -0.14400 -0.288000 -0.523000 1.80e-01 7.27e-03 1.07e-06
CELL WALL CELL WALL PROTEINS AGPS AGP 39 2.14e-14 1.89e-12 0.6110 0.56600 -0.189000 -0.132000 9.50e-10 4.15e-02 1.55e-01
SIGNALLING RECEPTOR KINASES PROLINE EXTENSIN LIKE 15 7.79e-03 1.88e-02 0.6040 -0.29400 -0.231000 -0.474000 4.83e-02 1.22e-01 1.47e-03
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 59 7.30e-10 2.15e-08 0.6030 0.23700 0.254000 0.493000 1.63e-03 7.21e-04 5.63e-11
TRANSPORT CALCIUM 21 4.62e-06 3.72e-05 0.6000 -0.24500 0.418000 0.355000 5.21e-02 9.15e-04 4.90e-03
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNAS 14 5.51e-03 1.46e-02 0.5960 0.28900 0.177000 0.491000 6.11e-02 2.52e-01 1.48e-03
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNPS 14 2.86e-02 5.34e-02 0.5900 0.39000 0.265000 0.355000 1.16e-02 8.57e-02 2.15e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE 10 6.94e-05 3.47e-04 0.5890 0.45700 -0.342000 0.145000 1.23e-02 6.09e-02 4.28e-01
SIGNALLING RECEPTOR KINASES WHEAT LRK10 LIKE 12 3.45e-02 6.31e-02 0.5840 -0.11200 -0.302000 -0.487000 5.03e-01 7.04e-02 3.49e-03
PROTEIN ASSEMBLY AND COFACTOR LIGATION 23 4.82e-04 1.88e-03 0.5820 0.05370 0.300000 0.495000 6.56e-01 1.27e-02 3.91e-05
SECONDARY METABOLISM SIMPLE PHENOLS 16 8.45e-03 2.00e-02 0.5780 -0.15700 -0.259000 -0.493000 2.78e-01 7.31e-02 6.44e-04
SIGNALLING RECEPTOR KINASES WALL ASSOCIATED KINASE 22 4.82e-03 1.29e-02 0.5770 -0.41100 -0.307000 -0.265000 8.51e-04 1.28e-02 3.14e-02
PS LIGHTREACTION NADH DH 12 5.80e-04 2.17e-03 0.5460 0.34200 -0.082200 0.417000 4.01e-02 6.22e-01 1.23e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION 12 3.61e-02 6.55e-02 0.5460 0.38900 0.376000 0.072700 1.97e-02 2.42e-02 6.63e-01
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 15 3.49e-04 1.40e-03 0.5450 -0.51600 0.052700 -0.166000 5.34e-04 7.24e-01 2.66e-01
RNA REGULATION OF TRANSCRIPTION SNF7 12 7.34e-02 1.18e-01 0.5410 -0.22900 -0.437000 -0.223000 1.70e-01 8.83e-03 1.82e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) DOF ZINC FINGER FAMILY 31 9.10e-07 1.10e-05 0.5340 0.23400 -0.265000 -0.400000 2.39e-02 1.07e-02 1.16e-04
RNA REGULATION OF TRANSCRIPTION PWWP DOMAIN PROTEIN 11 6.73e-03 1.71e-02 0.5340 -0.17700 -0.035200 -0.502000 3.10e-01 8.40e-01 3.93e-03
RNA REGULATION OF TRANSCRIPTION CHROMATIN REMODELING FACTORS 35 1.01e-06 1.11e-05 0.5330 -0.36700 -0.080900 -0.378000 1.74e-04 4.08e-01 1.07e-04
MINOR CHO METABOLISM CALLOSE 13 1.84e-05 1.16e-04 0.5300 -0.25800 0.251000 -0.389000 1.07e-01 1.17e-01 1.52e-02
TRANSPORT NUCLEOTIDES 19 3.17e-02 5.84e-02 0.5230 -0.28900 -0.272000 -0.340000 2.93e-02 3.98e-02 1.03e-02
PROTEIN TARGETING MITOCHONDRIA 32 1.37e-05 8.83e-05 0.5210 0.33100 0.100000 0.389000 1.21e-03 3.27e-01 1.37e-04
RNA REGULATION OF TRANSCRIPTION WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY 61 4.63e-06 3.72e-05 0.5170 -0.17500 -0.347000 -0.341000 1.80e-02 2.73e-06 4.07e-06
RNA REGULATION OF TRANSCRIPTION PHD FINGER TRANSCRIPTION FACTOR 10 4.72e-03 1.28e-02 0.5070 -0.33200 0.094600 -0.371000 6.92e-02 6.05e-01 4.21e-02
MISC GLUCO-, GALACTO- AND MANNOSIDASES BETA-GALACTOSIDASE 13 1.36e-01 1.94e-01 0.5020 -0.33700 -0.284000 -0.240000 3.52e-02 7.62e-02 1.34e-01
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 417 2.65e-103 7.03e-101 0.4990 -0.35800 0.289000 0.193000 3.83e-36 3.73e-24 1.31e-11
PROTEIN DEGRADATION AUTOPHAGY 22 1.06e-05 7.62e-05 0.4950 -0.33800 -0.199000 0.301000 6.00e-03 1.07e-01 1.45e-02
CELL WALL CELLULOSE SYNTHESIS CELLULOSE SYNTHASE 24 1.32e-06 1.32e-05 0.4940 -0.01210 0.494000 0.007010 9.18e-01 2.76e-05 9.53e-01
DEVELOPMENT STORAGE PROTEINS 18 4.81e-02 8.44e-02 0.4920 0.16800 0.378000 0.267000 2.18e-01 5.52e-03 5.01e-02
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY 42 9.71e-07 1.11e-05 0.4890 0.05460 -0.179000 -0.452000 5.40e-01 4.43e-02 4.02e-07
PROTEIN DEGRADATION UBIQUITIN E3 BTB/POZ CULLIN3 BTB/POZ 10 6.31e-03 1.62e-02 0.4890 0.11300 -0.071200 0.470000 5.35e-01 6.96e-01 1.00e-02
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES PHOSPHOLIPASE D 12 3.27e-03 9.53e-03 0.4800 -0.43300 0.124000 -0.164000 9.35e-03 4.56e-01 3.25e-01
HORMONE METABOLISM ABSCISIC ACID SYNTHESIS-DEGRADATION 10 2.17e-01 2.83e-01 0.4790 -0.26000 -0.365000 -0.168000 1.54e-01 4.54e-02 3.59e-01
RNA REGULATION OF TRANSCRIPTION AS2,LATERAL ORGAN BOUNDARIES GENE FAMILY 21 9.80e-05 4.64e-04 0.4770 0.46200 -0.083200 0.082900 2.48e-04 5.09e-01 5.11e-01
RNA REGULATION OF TRANSCRIPTION GLOBAL TRANSCRIPTION FACTOR GROUP 13 1.82e-02 3.62e-02 0.4750 -0.29800 -0.047400 -0.367000 6.26e-02 7.67e-01 2.19e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI 10 7.94e-02 1.27e-01 0.4710 -0.17100 -0.102000 -0.426000 3.49e-01 5.78e-01 1.95e-02
SIGNALLING PHOSPHINOSITIDES PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 18 1.52e-03 4.86e-03 0.4670 -0.30000 -0.004610 -0.358000 2.77e-02 9.73e-01 8.48e-03
HORMONE METABOLISM GIBBERELIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 11 6.16e-02 1.01e-01 0.4640 0.06250 0.122000 0.443000 7.20e-01 4.83e-01 1.09e-02
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE 22 4.81e-02 8.44e-02 0.4560 -0.26700 -0.229000 -0.289000 2.99e-02 6.31e-02 1.88e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE 25 6.53e-04 2.36e-03 0.4550 0.37200 0.041600 0.259000 1.27e-03 7.19e-01 2.52e-02
PROTEIN TARGETING CHLOROPLAST 36 1.66e-06 1.57e-05 0.4540 -0.43300 0.010600 0.136000 6.93e-06 9.12e-01 1.57e-01
SIGNALLING RECEPTOR KINASES DUF 26 39 2.94e-04 1.20e-03 0.4510 -0.13100 -0.175000 -0.395000 1.56e-01 5.89e-02 2.00e-05
CELL WALL MODIFICATION 55 4.48e-05 2.57e-04 0.4420 0.27900 0.162000 0.302000 3.42e-04 3.71e-02 1.09e-04
RNA REGULATION OF TRANSCRIPTION HISTONE ACETYLTRANSFERASES 18 1.64e-02 3.31e-02 0.4410 -0.30400 -0.079000 -0.309000 2.57e-02 5.62e-01 2.31e-02
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE 26 1.86e-02 3.66e-02 0.4400 0.33500 0.258000 0.124000 3.14e-03 2.29e-02 2.74e-01
CELL WALL DEGRADATION MANNAN-XYLOSE-ARABINOSE-FUCOSE 16 4.73e-03 1.28e-02 0.4400 -0.36600 0.046000 0.240000 1.13e-02 7.50e-01 9.71e-02
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN 101 3.63e-09 8.74e-08 0.4390 -0.37300 -0.191000 -0.132000 9.27e-11 9.10e-04 2.19e-02
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) GATA TRANSCRIPTION FACTOR FAMILY 27 5.74e-06 4.47e-05 0.4310 0.38300 -0.197000 0.015200 5.72e-04 7.57e-02 8.91e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L34 10 1.00e-01 1.53e-01 0.4310 0.20400 0.058500 0.375000 2.63e-01 7.49e-01 4.02e-02
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VIII 10 6.79e-02 1.10e-01 0.4250 -0.24900 0.116000 0.323000 1.72e-01 5.24e-01 7.67e-02
RNA REGULATION OF TRANSCRIPTION NAC DOMAIN TRANSCRIPTION FACTOR FAMILY 16 5.53e-02 9.39e-02 0.4230 -0.39300 -0.144000 -0.061700 6.43e-03 3.19e-01 6.69e-01
METAL HANDLING 10 3.28e-01 4.02e-01 0.4150 -0.12800 -0.338000 -0.203000 4.82e-01 6.43e-02 2.65e-01
SECONDARY METABOLISM FLAVONOIDS DIHYDROFLAVONOLS 16 8.54e-03 2.00e-02 0.4140 0.29600 0.243000 -0.159000 4.07e-02 9.30e-02 2.72e-01
STRESS BIOTIC SIGNALLING 13 9.38e-02 1.44e-01 0.4140 0.08920 -0.263000 -0.307000 5.77e-01 1.01e-01 5.55e-02
NOT ASSIGNED NO ONTOLOGY HYDROXYPROLINE RICH PROTEINS 53 1.15e-05 7.81e-05 0.4100 0.08950 -0.249000 -0.314000 2.60e-01 1.74e-03 7.85e-05
MISC GLUTATHIONE S TRANSFERASES 53 2.10e-04 9.13e-04 0.4090 0.31600 0.141000 0.219000 6.95e-05 7.52e-02 5.83e-03
RNA REGULATION OF TRANSCRIPTION HB,HOMEOBOX TRANSCRIPTION FACTOR FAMILY 66 3.12e-06 2.66e-05 0.4050 0.04060 -0.222000 -0.336000 5.68e-01 1.83e-03 2.34e-06
NOT ASSIGNED NO ONTOLOGY ABC1 FAMILY PROTEIN 11 2.30e-01 2.97e-01 0.4020 0.08540 0.351000 0.176000 6.24e-01 4.36e-02 3.12e-01
PROTEIN DEGRADATION METALLOPROTEASE 37 2.57e-07 3.59e-06 0.4000 -0.33500 0.218000 -0.010100 4.27e-04 2.15e-02 9.15e-01
RNA REGULATION OF TRANSCRIPTION C2H2 ZINC FINGER FAMILY 99 1.15e-05 7.81e-05 0.3970 -0.17200 -0.281000 -0.222000 3.09e-03 1.36e-06 1.37e-04
RNA PROCESSING RNA HELICASE 33 4.46e-05 2.57e-04 0.3970 -0.37700 0.059500 -0.108000 1.74e-04 5.54e-01 2.84e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT II 13 3.14e-03 9.26e-03 0.3970 0.06330 0.324000 -0.220000 6.93e-01 4.33e-02 1.70e-01
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS 18 1.50e-02 3.10e-02 0.3960 0.20100 -0.213000 -0.267000 1.39e-01 1.18e-01 4.99e-02
SIGNALLING PHOSPHINOSITIDES 16 1.71e-03 5.33e-03 0.3960 -0.30500 0.167000 -0.190000 3.47e-02 2.48e-01 1.87e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE 30 2.63e-04 1.09e-03 0.3900 -0.30500 0.078700 0.230000 3.81e-03 4.56e-01 2.94e-02
PROTEIN FOLDING 64 8.33e-04 2.90e-03 0.3890 0.17400 0.209000 0.278000 1.64e-02 3.77e-03 1.22e-04
HORMONE METABOLISM SALICYLIC ACID SYNTHESIS-DEGRADATION 10 7.14e-02 1.15e-01 0.3880 0.13500 0.013200 -0.363000 4.61e-01 9.42e-01 4.66e-02
REDOX ASCORBATE AND GLUTATHIONE ASCORBATE 16 2.57e-01 3.26e-01 0.3870 0.18000 0.282000 0.194000 2.11e-01 5.11e-02 1.79e-01
RNA REGULATION OF TRANSCRIPTION GEBP LIKE 10 8.53e-02 1.33e-01 0.3850 0.06800 0.379000 0.006620 7.10e-01 3.78e-02 9.71e-01
HORMONE METABOLISM AUXIN SYNTHESIS-DEGRADATION 13 6.11e-02 1.01e-01 0.3840 0.19600 0.328000 -0.038200 2.22e-01 4.05e-02 8.11e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE IX 12 1.63e-01 2.28e-01 0.3830 -0.28400 -0.068300 -0.247000 8.81e-02 6.82e-01 1.38e-01
DEVELOPMENT SQUAMOSA PROMOTER BINDING LIKE (SPL) 16 2.07e-01 2.76e-01 0.3760 -0.07920 -0.206000 -0.305000 5.83e-01 1.54e-01 3.49e-02
NUCLEOTIDE METABOLISM SALVAGE NUDIX HYDROLASES 24 2.32e-02 4.51e-02 0.3740 0.33300 0.171000 -0.007410 4.75e-03 1.48e-01 9.50e-01
PROTEIN TARGETING PEROXISOMES 10 4.62e-01 5.33e-01 0.3740 -0.25100 -0.246000 -0.129000 1.69e-01 1.78e-01 4.81e-01
PROTEIN DEGRADATION UBIQUITIN E2 38 2.43e-08 4.27e-07 0.3720 0.17900 -0.296000 0.137000 5.56e-02 1.61e-03 1.44e-01
MISC PLASTOCYANIN-LIKE 23 2.84e-03 8.47e-03 0.3670 0.34200 -0.065200 0.115000 4.51e-03 5.88e-01 3.41e-01
RNA REGULATION OF TRANSCRIPTION JUMONJI FAMILY 13 1.62e-02 3.31e-02 0.3630 -0.29000 0.162000 -0.145000 6.99e-02 3.11e-01 3.65e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS 11 1.04e-01 1.57e-01 0.3610 -0.14100 0.301000 0.140000 4.18e-01 8.35e-02 4.20e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2 14 8.87e-02 1.37e-01 0.3550 -0.21400 -0.019600 -0.283000 1.65e-01 8.99e-01 6.69e-02
RNA REGULATION OF TRANSCRIPTION BZIP TRANSCRIPTION FACTOR FAMILY 60 4.55e-05 2.57e-04 0.3520 0.09730 -0.226000 -0.252000 1.92e-01 2.50e-03 7.23e-04
SIGNALLING RECEPTOR KINASES MISC 74 6.61e-05 3.37e-04 0.3500 -0.26000 -0.098800 -0.212000 1.10e-04 1.42e-01 1.61e-03
PROTEIN SYNTHESIS INITIATION 77 5.00e-04 1.92e-03 0.3470 0.07640 0.206000 0.269000 2.47e-01 1.77e-03 4.55e-05
LIPID METABOLISM LIPID DEGRADATION LIPASES TRIACYLGLYCEROL LIPASE 28 5.19e-04 1.96e-03 0.3450 -0.21200 0.262000 0.074200 5.23e-02 1.63e-02 4.97e-01
STRESS BIOTIC PR-PROTEINS 170 1.41e-11 5.36e-10 0.3440 -0.19600 -0.086700 -0.270000 1.09e-05 5.12e-02 1.26e-09
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY 22 7.18e-03 1.78e-02 0.3390 0.23200 -0.216000 -0.118000 5.92e-02 7.92e-02 3.36e-01
TRANSPORT SUGARS 60 3.44e-05 2.07e-04 0.3380 -0.10700 0.250000 0.201000 1.51e-01 8.08e-04 6.97e-03
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) CO-LIKE, CONSTANS-LIKE ZINC FINGER FAMILY 24 8.64e-03 2.00e-02 0.3360 0.07050 -0.019500 -0.328000 5.50e-01 8.68e-01 5.41e-03
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES MISC 11 4.01e-01 4.72e-01 0.3360 0.29800 0.123000 0.091700 8.67e-02 4.78e-01 5.98e-01
STRESS ABIOTIC 22 8.41e-02 1.33e-01 0.3320 0.18800 0.078400 0.262000 1.27e-01 5.25e-01 3.36e-02
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY 121 1.75e-08 3.31e-07 0.3310 0.08130 -0.204000 -0.247000 1.22e-01 1.03e-04 2.67e-06
LIPID METABOLISM EXOTICS(STEROIDS, SQUALENE ETC) 17 6.12e-02 1.01e-01 0.3300 0.32500 -0.021100 0.054200 2.03e-02 8.80e-01 6.99e-01
RNA REGULATION OF TRANSCRIPTION TCP TRANSCRIPTION FACTOR FAMILY 16 3.27e-01 4.02e-01 0.3300 -0.04960 -0.222000 -0.239000 7.31e-01 1.24e-01 9.82e-02
MISC BETA 1,3 GLUCAN HYDROLASES 19 1.83e-02 3.62e-02 0.3280 0.20700 -0.232000 -0.103000 1.18e-01 7.94e-02 4.35e-01
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE 23 1.26e-01 1.85e-01 0.3260 -0.23300 -0.099200 -0.205000 5.32e-02 4.10e-01 8.92e-02
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS 44 3.62e-03 1.04e-02 0.3230 0.27400 0.053400 0.163000 1.65e-03 5.40e-01 6.19e-02
RNA REGULATION OF TRANSCRIPTION ZF-HD 14 2.03e-01 2.72e-01 0.3230 0.00635 -0.292000 -0.138000 9.67e-01 5.84e-02 3.72e-01
METAL HANDLING ACQUISITION 10 1.23e-01 1.83e-01 0.3220 0.17000 -0.270000 -0.046700 3.52e-01 1.39e-01 7.98e-01
TRANSPORT UNSPECIFIED ANIONS 15 2.36e-02 4.51e-02 0.3160 -0.24100 0.159000 -0.128000 1.06e-01 2.85e-01 3.89e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL COA LIGASE 19 3.12e-02 5.79e-02 0.3130 -0.20000 0.214000 0.110000 1.31e-01 1.07e-01 4.05e-01
TCA / ORG TRANSFORMATION CARBONIC ANHYDRASES 11 2.00e-01 2.72e-01 0.3130 0.11700 -0.004750 0.290000 5.01e-01 9.78e-01 9.61e-02
TRANSPORT UNSPECIFIED CATIONS 38 4.10e-03 1.14e-02 0.3110 -0.09920 0.245000 0.164000 2.90e-01 8.97e-03 8.10e-02
RNA REGULATION OF TRANSCRIPTION ARR 16 1.89e-01 2.58e-01 0.3110 0.25800 0.041800 0.168000 7.35e-02 7.72e-01 2.46e-01
NOT ASSIGNED NO ONTOLOGY ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN 32 2.70e-02 5.07e-02 0.3100 -0.05210 0.242000 0.187000 6.10e-01 1.78e-02 6.69e-02
SIGNALLING RECEPTOR KINASES LEGUME-LECTIN 12 8.96e-02 1.38e-01 0.3100 -0.20400 0.230000 0.037300 2.22e-01 1.67e-01 8.23e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES 16 5.65e-02 9.54e-02 0.3060 0.00918 -0.033500 0.304000 9.49e-01 8.17e-01 3.51e-02
MISC GCN5-RELATED N-ACETYLTRANSFERASE 25 1.45e-01 2.06e-01 0.3040 0.21000 0.094000 0.199000 6.91e-02 4.16e-01 8.55e-02
RNA RNA BINDING 163 1.27e-05 8.38e-05 0.3010 -0.10000 -0.183000 -0.217000 2.75e-02 5.44e-05 1.75e-06
SECONDARY METABOLISM N MISC ALKALOID-LIKE 20 2.58e-01 3.26e-01 0.3010 0.16600 0.239000 0.077000 2.00e-01 6.46e-02 5.51e-01
RNA REGULATION OF TRANSCRIPTION BHLH,BASIC HELIX-LOOP-HELIX FAMILY 120 4.11e-08 6.40e-07 0.3000 0.11500 -0.200000 -0.191000 2.92e-02 1.55e-04 2.91e-04
CELL CYCLE PEPTIDYLPROLYL ISOMERASE 32 1.12e-02 2.42e-02 0.2980 0.29600 -0.008030 -0.038000 3.79e-03 9.37e-01 7.10e-01
REDOX ASCORBATE AND GLUTATHIONE 23 7.17e-03 1.78e-02 0.2930 0.18900 -0.224000 -0.000233 1.17e-01 6.26e-02 9.98e-01
HORMONE METABOLISM CYTOKININ SYNTHESIS-DEGRADATION 16 1.21e-01 1.81e-01 0.2900 0.19500 0.189000 -0.103000 1.77e-01 1.91e-01 4.76e-01
LIPID METABOLISM LIPID TRANSFER PROTEINS ETC 13 5.11e-02 8.79e-02 0.2890 0.16400 -0.188000 0.145000 3.05e-01 2.41e-01 3.66e-01
RNA REGULATION OF TRANSCRIPTION 13 4.74e-01 5.40e-01 0.2870 -0.21800 -0.183000 -0.040100 1.74e-01 2.53e-01 8.03e-01
TRANSPORT ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS 110 4.58e-13 3.03e-11 0.2860 -0.12700 0.252000 -0.045800 2.12e-02 4.78e-06 4.06e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE 204 6.87e-12 3.04e-10 0.2850 -0.15600 -0.036300 -0.236000 1.17e-04 3.72e-01 6.44e-09
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE 16 1.21e-01 1.81e-01 0.2850 -0.20700 -0.037400 0.192000 1.51e-01 7.96e-01 1.84e-01
HORMONE METABOLISM ETHYLENE SIGNAL TRANSDUCTION 30 5.94e-02 9.96e-02 0.2850 -0.26800 -0.043600 -0.085000 1.10e-02 6.79e-01 4.21e-01
PROTEIN TARGETING SECRETORY PATHWAY VACUOLE 29 9.98e-03 2.20e-02 0.2820 -0.23500 0.140000 0.068600 2.88e-02 1.91e-01 5.23e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I 19 3.91e-01 4.63e-01 0.2810 -0.15300 -0.116000 -0.205000 2.49e-01 3.81e-01 1.22e-01
MISC ACID AND OTHER PHOSPHATASES 58 1.90e-03 5.80e-03 0.2800 -0.10200 0.148000 0.214000 1.78e-01 5.18e-02 4.75e-03
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX 250 4.28e-12 2.27e-10 0.2780 -0.06430 0.176000 0.205000 8.03e-02 1.58e-06 2.20e-08
TRANSPORT NITRATE 12 3.01e-01 3.75e-01 0.2780 -0.24400 -0.066300 0.114000 1.43e-01 6.91e-01 4.93e-01
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE 10 3.60e-01 4.36e-01 0.2760 -0.23100 -0.030100 0.149000 2.06e-01 8.69e-01 4.14e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE MITOCHONDRIAL MEMBRANE 62 1.20e-02 2.55e-02 0.2730 0.09550 0.101000 0.235000 1.94e-01 1.70e-01 1.36e-03
MISC PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN 62 3.76e-03 1.06e-02 0.2720 -0.03500 -0.250000 -0.099900 6.34e-01 6.55e-04 1.74e-01
NOT ASSIGNED NO ONTOLOGY EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN 19 2.10e-01 2.79e-01 0.2700 -0.12200 -0.043200 -0.237000 3.57e-01 7.44e-01 7.33e-02
MINOR CHO METABOLISM OTHERS 39 4.59e-02 8.16e-02 0.2700 -0.03460 0.127000 0.236000 7.09e-01 1.71e-01 1.08e-02
SIGNALLING LIGHT 89 6.15e-06 4.66e-05 0.2700 -0.02260 -0.014400 -0.268000 7.13e-01 8.14e-01 1.20e-05
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN PROTEASE 20 2.34e-01 3.00e-01 0.2620 -0.00726 0.235000 0.116000 9.55e-01 6.91e-02 3.67e-01
PROTEIN DEGRADATION AAA TYPE 35 6.94e-03 1.75e-02 0.2580 -0.23600 0.100000 -0.022900 1.55e-02 3.06e-01 8.15e-01
CELL WALL HEMICELLULOSE SYNTHESIS 13 6.80e-01 7.35e-01 0.2560 0.13200 0.190000 0.110000 4.12e-01 2.36e-01 4.92e-01
NOT ASSIGNED NO ONTOLOGY C2 DOMAIN-CONTAINING PROTEIN 38 1.49e-03 4.83e-03 0.2540 -0.19900 0.143000 -0.068700 3.40e-02 1.27e-01 4.64e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII 41 2.12e-01 2.79e-01 0.2520 -0.09900 -0.188000 -0.134000 2.73e-01 3.68e-02 1.37e-01
REDOX THIOREDOXIN 50 8.96e-03 2.03e-02 0.2510 0.13000 0.018600 0.214000 1.11e-01 8.20e-01 8.73e-03
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 40 3.75e-03 1.06e-02 0.2510 -0.03410 0.042700 -0.245000 7.09e-01 6.40e-01 7.22e-03
SECONDARY METABOLISM PHENYLPROPANOIDS 37 2.04e-01 2.73e-01 0.2500 0.12500 0.197000 0.089500 1.90e-01 3.79e-02 3.46e-01
RNA REGULATION OF TRANSCRIPTION SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY 34 1.64e-03 5.16e-03 0.2500 -0.03290 0.224000 -0.105000 7.40e-01 2.37e-02 2.91e-01
TRANSPORT POTASSIUM 37 5.83e-03 1.53e-02 0.2490 -0.21100 0.083000 -0.103000 2.61e-02 3.82e-01 2.79e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF SKP 16 4.09e-01 4.79e-01 0.2460 0.15200 0.044700 0.188000 2.93e-01 7.57e-01 1.92e-01
STRESS BIOTIC SIGNALLING MLO-LIKE 12 6.66e-01 7.27e-01 0.2450 -0.06320 -0.111000 -0.209000 7.05e-01 5.04e-01 2.11e-01
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED 72 3.83e-04 1.51e-03 0.2410 0.22400 -0.033000 0.083500 1.00e-03 6.28e-01 2.21e-01
STRESS ABIOTIC TOUCH/WOUNDING 13 7.53e-01 7.93e-01 0.2400 -0.11300 -0.147000 -0.152000 4.80e-01 3.58e-01 3.43e-01
RNA REGULATION OF TRANSCRIPTION METHYL BINDING DOMAIN PROTEINS 10 7.48e-01 7.93e-01 0.2400 0.19500 0.126000 0.057700 2.85e-01 4.91e-01 7.52e-01
HORMONE METABOLISM ETHYLENE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 24 1.68e-01 2.33e-01 0.2390 0.08960 -0.179000 -0.132000 4.47e-01 1.30e-01 2.64e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XI 27 1.28e-02 2.69e-02 0.2390 -0.10200 0.208000 -0.058800 3.57e-01 6.17e-02 5.97e-01
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION 30 1.13e-02 2.42e-02 0.2370 0.16800 -0.159000 0.053000 1.12e-01 1.31e-01 6.15e-01
SIGNALLING MISC 16 5.55e-01 6.13e-01 0.2370 0.20700 0.085800 0.078200 1.52e-01 5.52e-01 5.88e-01
TRANSPORT P- AND V-ATPASES 28 4.99e-02 8.65e-02 0.2350 -0.16400 0.156000 0.062600 1.33e-01 1.54e-01 5.66e-01
PROTEIN TARGETING SECRETORY PATHWAY GOLGI 17 1.11e-01 1.67e-01 0.2270 -0.06180 0.211000 -0.055700 6.59e-01 1.32e-01 6.91e-01
DNA REPAIR 74 8.57e-03 2.00e-02 0.2250 -0.12700 -0.036300 -0.182000 5.83e-02 5.90e-01 6.94e-03
RNA REGULATION OF TRANSCRIPTION ZN-FINGER(CCHC) 10 5.45e-01 6.04e-01 0.2240 0.17100 -0.007050 -0.144000 3.48e-01 9.69e-01 4.31e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI 14 3.56e-01 4.35e-01 0.2220 0.04640 0.007560 -0.217000 7.64e-01 9.61e-01 1.59e-01
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) SPHINGOLIPIDS 20 3.83e-01 4.56e-01 0.2220 0.02890 0.058500 0.212000 8.23e-01 6.51e-01 1.01e-01
RNA REGULATION OF TRANSCRIPTION HDA 16 7.30e-01 7.83e-01 0.2210 0.13600 0.141000 0.102000 3.45e-01 3.28e-01 4.82e-01
STRESS ABIOTIC UNSPECIFIED 86 1.22e-03 4.04e-03 0.2200 0.06710 -0.183000 -0.102000 2.82e-01 3.29e-03 1.01e-01
CO-FACTOR AND VITAMINE METABOLISM 15 3.84e-01 4.56e-01 0.2200 -0.18100 0.004530 0.125000 2.24e-01 9.76e-01 4.04e-01
AMINO ACID METABOLISM SYNTHESIS SERINE-GLYCINE-CYSTEINE GROUP CYSTEINE OASTL 10 7.60e-01 7.93e-01 0.2190 0.19500 0.092600 0.036200 2.85e-01 6.12e-01 8.43e-01
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR) 26 8.50e-02 1.33e-01 0.2180 -0.19100 0.073000 -0.074900 9.12e-02 5.19e-01 5.09e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES ENDOGLUCANASE 13 5.23e-01 5.88e-01 0.2170 0.00961 -0.038900 -0.213000 9.52e-01 8.08e-01 1.84e-01
RNA PROCESSING SPLICING 58 5.96e-03 1.55e-02 0.2140 0.03950 0.008460 -0.210000 6.03e-01 9.11e-01 5.69e-03
RNA REGULATION OF TRANSCRIPTION PHOR1 11 3.81e-01 4.56e-01 0.2120 -0.06040 0.203000 -0.016300 7.29e-01 2.45e-01 9.25e-01
MISC MYROSINASES-LECTIN-JACALIN 46 2.39e-02 4.52e-02 0.2100 0.14600 0.051600 -0.142000 8.73e-02 5.45e-01 9.60e-02
PROTEIN DEGRADATION SERINE PROTEASE 80 4.33e-03 1.20e-02 0.2070 -0.20200 -0.006130 0.044400 1.75e-03 9.24e-01 4.93e-01
SECONDARY METABOLISM WAX 16 7.40e-01 7.87e-01 0.2060 0.06040 0.117000 0.159000 6.76e-01 4.20e-01 2.71e-01
PROTEIN DEGRADATION 129 5.77e-05 3.06e-04 0.2030 -0.16100 0.020900 0.122000 1.57e-03 6.82e-01 1.68e-02
PROTEIN DEGRADATION CYSTEINE PROTEASE 48 4.07e-02 7.34e-02 0.2030 -0.16800 0.020600 0.112000 4.36e-02 8.05e-01 1.81e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN 26 1.27e-01 1.85e-01 0.2030 0.01540 -0.034400 0.199000 8.92e-01 7.62e-01 7.84e-02
MISC BETA 1,3 GLUCAN HYDROLASES GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 22 3.81e-01 4.56e-01 0.2030 0.07920 -0.124000 -0.140000 5.20e-01 3.14e-01 2.57e-01
CELL CYCLE 86 1.73e-04 7.63e-04 0.2020 0.09750 -0.176000 -0.020800 1.18e-01 4.78e-03 7.39e-01
HORMONE METABOLISM ABSCISIC ACID SIGNAL TRANSDUCTION 10 6.88e-01 7.42e-01 0.2020 0.07710 -0.146000 -0.116000 6.73e-01 4.24e-01 5.25e-01
CELL ORGANISATION 344 4.48e-09 9.43e-08 0.2020 -0.05930 -0.047700 -0.187000 5.88e-02 1.29e-01 2.72e-09
HORMONE METABOLISM ABSCISIC ACID INDUCED-REGULATED-RESPONSIVE-ACTIVATED 22 1.33e-01 1.91e-01 0.2010 0.10900 -0.078500 0.150000 3.74e-01 5.24e-01 2.25e-01
REDOX DISMUTASES AND CATALASES 11 5.24e-01 5.88e-01 0.2000 -0.09880 -0.155000 0.078500 5.70e-01 3.72e-01 6.52e-01
TRANSPORT SULPHATE 12 5.80e-01 6.38e-01 0.1960 0.04940 -0.014800 -0.189000 7.67e-01 9.29e-01 2.56e-01
MISC MISC2 28 4.54e-01 5.25e-01 0.1940 -0.00715 0.146000 0.127000 9.48e-01 1.81e-01 2.44e-01
MICRO RNA, NATURAL ANTISENSE ETC 201 2.23e-07 3.28e-06 0.1940 0.07490 -0.166000 -0.064800 6.71e-02 4.84e-05 1.13e-01
TRANSPORT METAL 67 1.12e-02 2.42e-02 0.1930 -0.05790 0.174000 0.058600 4.12e-01 1.36e-02 4.07e-01
REDOX ASCORBATE AND GLUTATHIONE GLUTATHIONE 11 6.72e-01 7.30e-01 0.1930 0.16400 0.078900 -0.063600 3.47e-01 6.50e-01 7.15e-01
PROTEIN TARGETING NUCLEUS 42 4.99e-02 8.65e-02 0.1930 -0.00440 0.192000 0.006470 9.61e-01 3.10e-02 9.42e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS DEXD-BOX HELICASES 14 7.59e-01 7.93e-01 0.1920 0.11400 0.149000 0.042600 4.60e-01 3.35e-01 7.82e-01
TRANSPORT CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS 17 2.42e-01 3.10e-01 0.1880 0.01140 0.159000 -0.098900 9.35e-01 2.57e-01 4.80e-01
RNA PROCESSING RIBONUCLEASES 47 9.26e-03 2.08e-02 0.1860 -0.01900 -0.132000 0.130000 8.22e-01 1.16e-01 1.23e-01
PROTEIN DEGRADATION UBIQUITIN E3 RING 374 1.75e-06 1.60e-05 0.1850 -0.16300 -0.066400 -0.055900 6.41e-08 2.76e-02 6.33e-02
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR 143 1.04e-02 2.28e-02 0.1830 -0.07430 -0.064600 -0.154000 1.25e-01 1.83e-01 1.48e-03
MISC OXIDASES - COPPER, FLAVONE ETC 85 7.76e-03 1.88e-02 0.1820 0.02960 0.179000 0.012000 6.37e-01 4.38e-03 8.49e-01
SIGNALLING MAP KINASES 45 1.50e-01 2.11e-01 0.1780 -0.05860 -0.017500 -0.168000 4.97e-01 8.39e-01 5.18e-02
MISC GDSL-MOTIF LIPASE 59 1.80e-01 2.48e-01 0.1780 0.02180 -0.112000 -0.137000 7.72e-01 1.36e-01 6.94e-02
SIGNALLING IN SUGAR AND NUTRIENT PHYSIOLOGY 36 3.02e-01 3.75e-01 0.1730 -0.16800 -0.032800 0.019800 8.03e-02 7.33e-01 8.37e-01
PROTEIN SYNTHESIS RELEASE 10 8.21e-01 8.43e-01 0.1720 -0.04750 0.086200 0.142000 7.95e-01 6.37e-01 4.38e-01
MISC CYTOCHROME P450 167 1.32e-04 6.01e-04 0.1690 -0.11600 0.012500 -0.122000 9.62e-03 7.80e-01 6.68e-03
MISC PEROXIDASES 59 8.17e-02 1.30e-01 0.1680 0.09870 -0.000340 0.136000 1.90e-01 9.96e-01 7.08e-02
TRANSPORT PHOSPHATE 21 4.28e-01 4.97e-01 0.1670 -0.08610 0.132000 0.055900 4.95e-01 2.95e-01 6.58e-01
RNA PROCESSING 105 9.84e-03 2.19e-02 0.1650 0.06450 0.005760 0.151000 2.54e-01 9.19e-01 7.35e-03
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN 25 5.95e-01 6.52e-01 0.1640 0.13200 0.097500 -0.002590 2.52e-01 3.99e-01 9.82e-01
SIGNALLING LIGHT COP9 SIGNALOSOME 12 7.38e-01 7.87e-01 0.1640 0.07910 -0.112000 -0.090700 6.35e-01 5.03e-01 5.86e-01
HORMONE METABOLISM AUXIN SIGNAL TRANSDUCTION 23 2.50e-01 3.19e-01 0.1640 0.00195 0.077300 -0.144000 9.87e-01 5.21e-01 2.32e-01
PROTEIN DEGRADATION UBIQUITIN 56 2.13e-01 2.80e-01 0.1620 -0.14900 -0.061400 0.013500 5.34e-02 4.27e-01 8.61e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES 42 4.74e-01 5.40e-01 0.1590 -0.00135 0.115000 0.109000 9.88e-01 1.96e-01 2.21e-01
STRESS ABIOTIC DROUGHT/SALT 65 4.15e-02 7.43e-02 0.1580 -0.05040 0.147000 0.027600 4.82e-01 4.09e-02 7.00e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN 12 7.57e-01 7.93e-01 0.1560 -0.08260 -0.131000 0.024600 6.20e-01 4.34e-01 8.82e-01
RNA REGULATION OF TRANSCRIPTION HSF,HEAT-SHOCK TRANSCRIPTION FACTOR FAMILY 19 4.27e-01 4.97e-01 0.1540 0.10800 -0.109000 0.007520 4.15e-01 4.09e-01 9.55e-01
PROTEIN DEGRADATION SUBTILASES 36 1.57e-01 2.20e-01 0.1540 -0.11900 0.070200 -0.067700 2.17e-01 4.66e-01 4.82e-01
MISC O-METHYL TRANSFERASES 19 8.41e-01 8.57e-01 0.1500 0.02500 0.100000 0.109000 8.50e-01 4.49e-01 4.11e-01
REDOX GLUTAREDOXINS 30 5.32e-01 5.95e-01 0.1500 0.09590 0.018600 0.114000 3.63e-01 8.60e-01 2.81e-01
TRANSPORT PEPTIDES AND OLIGOPEPTIDES 52 5.37e-02 9.17e-02 0.1480 -0.02590 0.141000 -0.036800 7.46e-01 7.82e-02 6.46e-01
NUCLEOTIDE METABOLISM DEGRADATION 25 3.61e-01 4.36e-01 0.1470 -0.10900 0.098800 -0.000271 3.46e-01 3.93e-01 9.98e-01
STRESS ABIOTIC COLD 16 7.74e-01 8.04e-01 0.1460 -0.11500 -0.088100 0.020400 4.26e-01 5.42e-01 8.88e-01
METAL HANDLING BINDING, CHELATION AND STORAGE 47 1.39e-01 1.98e-01 0.1460 0.12700 -0.055200 0.044800 1.31e-01 5.13e-01 5.95e-01
STRESS BIOTIC RECEPTORS 16 8.98e-01 9.05e-01 0.1450 -0.05230 -0.082400 -0.107000 7.17e-01 5.68e-01 4.57e-01
RNA REGULATION OF TRANSCRIPTION UNCLASSIFIED 267 8.70e-03 2.00e-02 0.1440 -0.06150 -0.119000 -0.052200 8.36e-02 7.94e-04 1.42e-01
DNA UNSPECIFIED 85 5.98e-02 9.97e-02 0.1400 -0.13500 0.032300 0.013100 3.10e-02 6.07e-01 8.34e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 19 8.40e-01 8.57e-01 0.1380 -0.10900 -0.082400 -0.020200 4.09e-01 5.34e-01 8.79e-01
MISC SHORT CHAIN DEHYDROGENASE/REDUCTASE (SDR) 47 4.70e-01 5.39e-01 0.1320 0.12800 0.021900 0.026100 1.30e-01 7.95e-01 7.57e-01
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES 156 1.12e-03 3.77e-03 0.1310 0.01350 0.126000 -0.034800 7.71e-01 6.83e-03 4.53e-01
RNA REGULATION OF TRANSCRIPTION C3H ZINC FINGER FAMILY 24 4.92e-01 5.58e-01 0.1290 -0.08250 0.098700 0.001550 4.84e-01 4.02e-01 9.89e-01
TRANSPORT MISC 115 1.56e-02 3.21e-02 0.1250 -0.07650 0.098100 0.010300 1.56e-01 6.92e-02 8.49e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES 10 8.48e-01 8.61e-01 0.1250 -0.10500 0.064700 0.017800 5.65e-01 7.23e-01 9.23e-01
HORMONE METABOLISM AUXIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 108 1.27e-01 1.85e-01 0.1220 0.10200 0.005650 0.067600 6.70e-02 9.19e-01 2.25e-01
SIGNALLING G-PROTEINS 219 1.29e-01 1.87e-01 0.1220 0.04430 0.069900 0.090000 2.58e-01 7.47e-02 2.18e-02
RNA REGULATION OF TRANSCRIPTION AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY 89 5.41e-01 6.02e-01 0.1220 0.07630 0.073200 0.060300 2.14e-01 2.33e-01 3.25e-01
NOT ASSIGNED UNKNOWN 4521 9.18e-65 1.22e-62 0.1210 0.04110 -0.114000 -0.007360 2.12e-05 4.57e-32 4.47e-01
STRESS ABIOTIC HEAT 156 2.36e-02 4.51e-02 0.1210 0.00939 -0.008670 -0.120000 8.40e-01 8.52e-01 9.55e-03
C1-METABOLISM 10 9.30e-01 9.33e-01 0.1200 0.00713 -0.038000 -0.113000 9.69e-01 8.35e-01 5.35e-01
TRANSPORT AMINO ACIDS 58 2.02e-01 2.72e-01 0.1180 -0.04040 0.110000 0.005570 5.94e-01 1.46e-01 9.42e-01
SIGNALLING CALCIUM 203 1.86e-03 5.74e-03 0.1110 -0.07130 0.040000 -0.075300 8.01e-02 3.26e-01 6.43e-02
DEVELOPMENT UNSPECIFIED 567 2.37e-02 4.51e-02 0.1030 -0.05740 -0.060800 -0.060800 1.96e-02 1.33e-02 1.34e-02
PROTEIN POSTRANSLATIONAL MODIFICATION 505 1.07e-06 1.13e-05 0.0992 -0.07730 0.053000 -0.032500 2.94e-03 4.15e-02 2.12e-01
STRESS BIOTIC 146 1.87e-01 2.56e-01 0.0966 -0.09010 -0.026000 0.023500 6.04e-02 5.88e-01 6.24e-01
CELL DIVISION 92 2.19e-01 2.84e-01 0.0949 0.01640 0.018000 -0.091800 7.86e-01 7.66e-01 1.28e-01
PROTEIN GLYCOSYLATION 27 8.21e-01 8.43e-01 0.0905 0.08260 -0.008050 0.036200 4.58e-01 9.42e-01 7.45e-01
SECONDARY METABOLISM ISOPRENOIDS TERPENOIDS 28 8.14e-01 8.43e-01 0.0890 -0.03740 0.001240 -0.080700 7.32e-01 9.91e-01 4.60e-01
CELL VESICLE TRANSPORT 158 2.63e-01 3.31e-01 0.0661 -0.00215 0.065600 -0.008070 9.63e-01 1.55e-01 8.61e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES 65 8.84e-01 8.94e-01 0.0621 -0.00735 0.040700 0.046400 9.18e-01 5.71e-01 5.18e-01
RNA TRANSCRIPTION 83 9.38e-01 9.38e-01 0.0369 0.03260 0.000702 0.017400 6.08e-01 9.91e-01 7.84e-01
NOT ASSIGNED NO ONTOLOGY 1423 3.18e-01 3.94e-01 0.0248 0.00704 -0.022300 -0.008220 6.57e-01 1.59e-01 6.04e-01


Detailed Gene set reports


RNA_REGULATION_OF_TRANSCRIPTION_CCAAT_BOX_BINDING_FACTOR_FAMILY,_HAP2

RNA_REGULATION_OF_TRANSCRIPTION_CCAAT_BOX_BINDING_FACTOR_FAMILY,_HAP2
metric value
setSize 10
pMANOVA 7.38e-05
p.adjustMANOVA 0.000358
s.dist 1.09
s.S93 -0.273
s.S94 -0.691
s.S80 -0.8
p.S93 0.135
p.S94 0.000155
p.S80 1.17e-05




Top 20 genes
Gene S80 S94
NFYA8 -10654 -10112
NFYA6 -10535 -10145
HAP2C -10470 -10104
UNE8 -9766 -10106
NFYA10 -8719 -8013
NFYA9 -9040 -6881
NFYA1 -9710 -5998
NFYA7 -6500 -3606
NFYA5 -2414 -6183

Click HERE to show all gene set members

All member genes
S93 S94 S80
HAP2C -10368 -10104 -10470
NFYA1 4464 -5998 -9710
NFYA10 -6841 -8013 -8719
NFYA4 5651 1958 -8792
NFYA5 -4218 -6183 -2414
NFYA6 -10047 -10145 -10535
NFYA7 1949 -3606 -6500
NFYA8 -4741 -10112 -10654
NFYA9 5744 -6881 -9040
UNE8 -10028 -10106 -9766



REDOX_THIOREDOXIN_PDIL

REDOX_THIOREDOXIN_PDIL
metric value
setSize 13
pMANOVA 5.57e-05
p.adjustMANOVA 0.000301
s.dist 1.04
s.S93 0.492
s.S94 0.638
s.S80 0.651
p.S93 0.00213
p.S94 6.81e-05
p.S80 4.79e-05




Top 20 genes
Gene S80 S94
PDIL1-3 9664 10796
PDIL1-6 9865 10559
PDIL2-2 9318 10735
PDIL1-4 9383 9606
PDIL2-1 9212 9730
PDIL1-2 9342 8897
PDIL2-3 8087 9568
PDIL1-5 8381 7792
PDIL5-2 7021 6228
PDIL1-1 6949 4593
PDIL5-1 3345 3059
ATPDIL5-4 1069 6333

Click HERE to show all gene set members

All member genes
S93 S94 S80
ATPDIL5-4 9299 6333 1069
PDIL1-1 -3970 4593 6949
PDIL1-2 2222 8897 9342
PDIL1-3 9204 10796 9664
PDIL1-4 4367 9606 9383
PDIL1-5 9415 7792 8381
PDIL1-6 5080 10559 9865
PDIL2-1 8982 9730 9212
PDIL2-2 10121 10735 9318
PDIL2-3 6794 9568 8087
PDIL5-1 7745 3059 3345
PDIL5-2 789 6228 7021
PDIL5-3 -1203 -4144 -3541



CELL_WALL_CELL_WALL_PROTEINS_HRGP

CELL_WALL_CELL_WALL_PROTEINS_HRGP
metric value
setSize 14
pMANOVA 2.3e-06
p.adjustMANOVA 2.03e-05
s.dist 1.02
s.S93 -0.196
s.S94 -0.604
s.S80 -0.803
p.S93 0.205
p.S94 9.06e-05
p.S80 1.92e-07




Top 20 genes
Gene S80 S94
AT4G08400 -10555 -10123
AT2G28240 -10655 -10004
EXT2 -10663 -9028
EXT3 -10699 -8709
AT5G12880 -8701 -9636
AT4G08410 -9981 -8242
AT1G26240 -8154 -8207
AT5G51680 -7923 -7656
AT2G43150 -10342 -5811
ATEXT4 -8898 -5183
AT4G28300 -9628 -3733
AT4G16790 -8381 -745
FRL4A -412 -1654

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G26240 -10508 -8207 -8154
AT2G28240 -6700 -10004 -10655
AT2G43150 7457 -5811 -10342
AT4G08400 -10308 -10123 -10555
AT4G08410 -8474 -8242 -9981
AT4G16790 1095 -745 -8381
AT4G28300 4130 -3733 -9628
AT5G12880 2664 -9636 -8701
AT5G51680 8907 -7656 -7923
ATEXT4 1145 -5183 -8898
EXT2 -7654 -9028 -10663
EXT3 -4531 -8709 -10699
FRL4A -5245 -1654 -412
FRL4B -206 4779 -6703



TRANSPORT_MAJOR_INTRINSIC_PROTEINS_PIP

TRANSPORT_MAJOR_INTRINSIC_PROTEINS_PIP
metric value
setSize 13
pMANOVA 0.000255
p.adjustMANOVA 0.00109
s.dist 0.96
s.S93 0.448
s.S94 0.607
s.S80 0.595
p.S93 0.00516
p.S94 0.000152
p.S80 0.000204




Top 20 genes
Gene S94 S80
PIP1.4 10962 10395
PIP2-7 10478 9961
PIP2-3 10430 8816
PIP2-5 7522 10234
PIP2-1 10941 6350
PIP1B 10797 5315
PIP2-4 7809 3932
PIP1-1 7951 3765
PIP1-5 3665 5064
PIP2-8 1759 6257

Click HERE to show all gene set members

All member genes
S93 S94 S80
PIP1-1 8584 7951 3765
PIP1-3 9797 -50 6201
PIP1-5 -9846 3665 5064
PIP1.4 7651 10962 10395
PIP1B 9097 10797 5315
PIP2-1 9160 10941 6350
PIP2-3 10401 10430 8816
PIP2-4 -981 7809 3932
PIP2-5 7037 7522 10234
PIP2-6 -7234 -1565 5639
PIP2-7 8404 10478 9961
PIP2-8 3211 1759 6257
PIP2B 7470 8741 -1626



DEVELOPMENT_LATE_EMBRYOGENESIS_ABUNDANT

DEVELOPMENT_LATE_EMBRYOGENESIS_ABUNDANT
metric value
setSize 18
pMANOVA 7.43e-05
p.adjustMANOVA 0.000358
s.dist 0.822
s.S93 0.219
s.S94 0.533
s.S80 0.585
p.S93 0.108
p.S94 8.91e-05
p.S80 1.7e-05




Top 20 genes
Gene S80 S94
LEA46 10467 10837
LEA29 10286 10808
AT3G19430 9813 10918
AT5G54370 10164 10275
AT1G54890 9154 10422
AT2G44060 8603 10840
SAG21 10243 6573
LEA7 8046 7766
AT5G60520 6244 8467
ECP63 5974 6548
AT4G27400 5730 5386
LEA14 8785 2627
AT5G60530 4258 4999
AT3G50790 3527 3008
LEA18 8155 443

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G54890 6855 10422 9154
AT2G44060 7824 10840 8603
AT2G46140 9983 -4240 1171
AT3G19430 7258 10918 9813
AT3G50790 -7379 3008 3527
AT3G53040 -9044 -6221 -3827
AT4G27400 -2319 5386 5730
AT5G54370 5201 10275 10164
AT5G60520 -3007 8467 6244
AT5G60530 927 4999 4258
ECP63 -586 6548 5974
LEA14 -2572 2627 8785
LEA18 -2570 443 8155
LEA2 8343 10334 -7404
LEA29 10607 10808 10286
LEA46 10551 10837 10467
LEA7 7716 7766 8046
SAG21 -4780 6573 10243



CELL_WALL_CELLULOSE_SYNTHESIS

CELL_WALL_CELLULOSE_SYNTHESIS
metric value
setSize 14
pMANOVA 4.83e-07
p.adjustMANOVA 6.4e-06
s.dist 0.801
s.S93 0.526
s.S94 0.593
s.S80 -0.116
p.S93 0.000648
p.S94 0.000123
p.S80 0.451




Top 20 genes
Gene S94 S93
CSLA15 10893 10557
ATCSLA01 10046 9966
CSLC5 9739 6604
CSLA10 6379 9454
CSLC4 9409 5601
CSLC12 5005 8984
ATCSLA11 4325 10356
CSLA9 6185 7154
CSLA14 5140 7610
CSLA2 3306 4499

Click HERE to show all gene set members

All member genes
S93 S94 S80
ATCSLA01 9966 10046 -9457
ATCSLA11 10356 4325 -3328
CSLA10 9454 6379 -9019
CSLA14 7610 5140 4434
CSLA15 10557 10893 -8111
CSLA2 4499 3306 -6826
CSLA9 7154 6185 -6884
CSLC12 8984 5005 3140
CSLC4 5601 9409 5222
CSLC5 6604 9739 1944
CSLC6 -167 8762 5777
CSLC8 2541 -125 -444
KOR -667 9392 140
PNT1 -3238 5785 4024



PROTEIN_SYNTHESIS_RIBOSOMAL_RNA

PROTEIN_SYNTHESIS_RIBOSOMAL_RNA
metric value
setSize 15
pMANOVA 6.13e-05
p.adjustMANOVA 0.000318
s.dist 0.789
s.S93 0.687
s.S94 0.262
s.S80 0.285
p.S93 4.05e-06
p.S94 0.0794
p.S80 0.0559




Top 20 genes
Gene S93 S80
AT3G41768 10213.0 8981.0
AT2G01010 10258.0 8410.0
RRN18 10452.0 6825.0
RRN23S.1 9621.5 6828.5
RRN23S.2 9621.5 6828.5
RRN16S.1 9695.5 6496.5
RRN16S.2 9695.5 6496.5
RRN4.5S.1 7384.5 2376.5
RRN4.5S.2 7384.5 2376.5
RRN5 3418.0 3596.0
RRN26 10169.0 98.0

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT2G01010 10258.0 10865.0 8410.0
AT2G01020 1501.5 -7953.5 -876.5
AT2G37990 2835.0 -8678.0 -6759.0
AT3G41768 10213.0 10988.0 8981.0
AT3G41979 1501.5 -7953.5 -876.5
RRN16S.1 9695.5 10483.5 6496.5
RRN16S.2 9695.5 10483.5 6496.5
RRN18 10452.0 10692.0 6825.0
RRN23S.1 9621.5 10857.5 6828.5
RRN23S.2 9621.5 10857.5 6828.5
RRN26 10169.0 2527.0 98.0
RRN4.5S.1 7384.5 6371.5 2376.5
RRN4.5S.2 7384.5 6371.5 2376.5
RRN5 3418.0 -7613.0 3596.0
RRN5S 6802.0 -10146.0 -7548.0



RNA_REGULATION_OF_TRANSCRIPTION_NUCLEOSOME/CHROMATIN_ASSEMBLY_FACTOR_GROUP

RNA_REGULATION_OF_TRANSCRIPTION_NUCLEOSOME/CHROMATIN_ASSEMBLY_FACTOR_GROUP
metric value
setSize 13
pMANOVA 0.000845
p.adjustMANOVA 0.00291
s.dist 0.774
s.S93 -0.0675
s.S94 -0.558
s.S80 -0.532
p.S93 0.674
p.S94 0.000492
p.S80 0.000899




Top 20 genes
Gene S94 S80
AT5G08630 -8747 -10587
HMGB9 -7733 -10333
FAS2 -8308 -9555
HMGB2 -9423 -7449
HMGB1 -6249 -10170
HMGB7 -6069 -8859
HMGB6 -5927 -8599
HMGB5 -8657 -4678
HMGB4 -5227 -2726
HMGB10 -7391 -1841
HMGB12 -3711 -34
HMGB3 -2386 -25

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT5G08630 -9333 -8747 -10587
FAS2 -5128 -8308 -9555
HMGB1 -1782 -6249 -10170
HMGB10 -1316 -7391 -1841
HMGB12 -216 -3711 -34
HMGB2 -8036 -9423 -7449
HMGB3 -3924 -2386 -25
HMGB4 5463 -5227 -2726
HMGB5 3613 -8657 -4678
HMGB6 5677 -5927 -8599
HMGB7 321 -6069 -8859
HMGB9 5157 -7733 -10333
SSRP1 992 8215 -595



MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE
metric value
setSize 20
pMANOVA 6.04e-07
p.adjustMANOVA 7.62e-06
s.dist 0.765
s.S93 0.652
s.S94 0.168
s.S80 0.363
p.S93 4.49e-07
p.S94 0.193
p.S80 0.00499




Top 20 genes
Gene S93 S80
ATP1 10242 9892
AT2G07698 10645 8221
AT2G19680 9463 6218
AT5G08690 6024 9635
AT4G29480 8807 6411
ATP6-1 10429 5189
ATPC 6669 7784
AT5G08670 7479 6857
ORF25 10200 4633
AT1G51650 9026 4816
AT5G60730 8921 4805
YMF19 9529 4490
AT5G08680 5024 7739
AT4G26210 7483 3375
ATP5 7153 2144
AT5G47030 7489 878

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G51650 9026 -7769 4816
AT2G07698 10645 10695 8221
AT2G19680 9463 4464 6218
AT3G46430 7914 -9841 -7895
AT4G26210 7483 -6147 3375
AT4G29480 8807 -3350 6411
AT5G08670 7479 7829 6857
AT5G08680 5024 10035 7739
AT5G08690 6024 10690 9635
AT5G12420 -5555 3909 -3496
AT5G47030 7489 -6151 878
AT5G60730 8921 1890 4805
ATP1 10242 11063 9892
ATP5 7153 -2619 2144
ATP6-1 10429 532 5189
ATP9 -4121 2023 -3053
ATPC 6669 7264 7784
ATPQ 7014 -9090 -4502
ORF25 10200 9134 4633
YMF19 9529 9750 4490



NOT_ASSIGNED_NO_ONTOLOGY_PROLINE_RICH_FAMILY

NOT_ASSIGNED_NO_ONTOLOGY_PROLINE_RICH_FAMILY
metric value
setSize 38
pMANOVA 3.09e-10
p.adjustMANOVA 1.02e-08
s.dist 0.754
s.S93 -0.0393
s.S94 -0.514
s.S80 -0.55
p.S93 0.675
p.S94 4.13e-08
p.S80 4.41e-09




Top 20 genes
Gene S80 S94
AT2G24980 -10748 -9986
AT5G06630 -10634 -9736
AT5G06640 -10720 -9569
AT5G11990 -10549 -9642
AT5G26080 -9792 -10033
AT5G19810 -9960 -9224
AT3G54580 -10678 -8367
ELF5 -9921 -8834
AT1G12810 -8678 -9919
AT1G23720 -10697 -7219
AT1G61080 -7868 -9417
AT3G28550 -10632 -6511
AT5G35190 -10316 -6245
AT3G22070 -7028 -8507
AT4G08380 -6389 -8901
AT1G70990 -8501 -6535
AT4G00890 -9068 -6102
AT5G45350 -6266 -8742
AT1G64450 -6893 -7566
AT3G49845 -5528 -8082

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G02110 -5160 -719 -6727
AT1G12810 -3592 -9919 -8678
AT1G23720 -1934 -7219 -10697
AT1G31750 -327 -5298 -7721
AT1G61080 -10499 -9417 -7868
AT1G63830 -4124 -6411 -899
AT1G64450 9554 -7566 -6893
AT1G70990 4967 -6535 -8501
AT2G16630 7933 9024 7945
AT2G24980 -7830 -9986 -10748
AT2G28440 -2426 -4898 -4671
AT2G34670 6259 2482 -548
AT3G06870 3376 6912 7336
AT3G09000 2078 4811 -2324
AT3G20850 2855 -8698 -1399
AT3G22070 9650 -8507 -7028
AT3G28550 5104 -6511 -10632
AT3G49840 6930 -2235 -865
AT3G49845 5110 -8082 -5528
AT3G51290 1822 -778 -1201
AT3G54580 1865 -8367 -10678
AT4G00890 610 -6102 -9068
AT4G08380 -10527 -8901 -6389
AT4G13390 1081 -1544 -9747
AT4G16140 9487 -437 -10083
AT4G18570 -6060 -5027 -6216
AT4G19200 -9771 -7892 -4441
AT4G27850 -2605 -4894 -5422
AT5G06630 -1488 -9736 -10634
AT5G06640 -4947 -9569 -10720
AT5G11990 -6462 -9642 -10549
AT5G19810 -9003 -9224 -9960
AT5G26080 -5981 -10033 -9792
AT5G35190 6387 -6245 -10316
AT5G45350 -8978 -8742 -6266
ELF5 -3310 -8834 -9921
MPH1 3201 10044 5011
WIH2 3292 -6542 -4754



DNA_SYNTHESIS/CHROMATIN_STRUCTURE_HISTONE_CORE_H2A

DNA_SYNTHESIS/CHROMATIN_STRUCTURE_HISTONE_CORE_H2A
metric value
setSize 14
pMANOVA 0.000641
p.adjustMANOVA 0.00236
s.dist 0.722
s.S93 0.556
s.S94 0.218
s.S80 0.406
p.S93 0.000313
p.S94 0.157
p.S80 0.0086




Top 20 genes
Gene S93 S80
HTA6 9718 10229
RAT5 8945 9952
HTA13 8136 10349
HTA10 8719 9377
HTA3 9222 6219
HTA9 5807 9866
HTA7 5759 9945
HTA8 8424 6290
H2AV 8153 1743
HTA2 2885 4114

Click HERE to show all gene set members

All member genes
S93 S94 S80
H2AV 8153 -3567 1743
H2B 8318 -2679 -1129
HTA10 8719 8286 9377
HTA12 3124 -995 -5860
HTA13 8136 5307 10349
HTA2 2885 4674 4114
HTA3 9222 -255 6219
HTA4 1522 3932 -7348
HTA5 -5027 -8835 -5441
HTA6 9718 8854 10229
HTA7 5759 5637 9945
HTA8 8424 2933 6290
HTA9 5807 8775 9866
RAT5 8945 6445 9952



RNA_REGULATION_OF_TRANSCRIPTION_G2-LIKE_TRANSCRIPTION_FACTOR_FAMILY,_GARP

RNA_REGULATION_OF_TRANSCRIPTION_G2-LIKE_TRANSCRIPTION_FACTOR_FAMILY,_GARP
metric value
setSize 37
pMANOVA 1.23e-09
p.adjustMANOVA 3.25e-08
s.dist 0.721
s.S93 -0.0824
s.S94 -0.592
s.S80 -0.403
p.S93 0.386
p.S94 4.53e-10
p.S80 2.2e-05




Top 20 genes
Gene S94 S80
AT2G38300 -9016 -10647
AT5G05090 -9789 -9629
AT5G06800 -9557 -9234
KAN1 -9744 -8661
APL -9512 -8741
EFM -9685 -8553
MYR1 -9038 -8865
MYR2 -8939 -8297
PHL7 -9795 -7268
KAN2 -6965 -9630
PHL13 -9046 -7205
PHL12 -7384 -8735
AT4G35940 -6912 -9293
AT1G69580 -5822 -9839
MYBC1 -9745 -5871
AT2G20400 -8303 -5897
AT3G10760 -5194 -9385
AT1G14600 -9507 -4952
AT2G42660 -8761 -5340
KAN3 -6717 -6447

Click HERE to show all gene set members

All member genes
S93 S94 S80
APL -7191 -9512 -8741
AT1G14600 -7914 -9507 -4952
AT1G69580 7002 -5822 -9839
AT2G20400 -1809 -8303 -5897
AT2G38300 -10349 -9016 -10647
AT2G40260 -4444 -1343 -8749
AT2G42660 1440 -8761 -5340
AT3G10760 7642 -5194 -9385
AT3G24120 -8739 -9734 -2098
AT4G35940 -2288 -6912 -9293
AT5G05090 -8231 -9789 -9629
AT5G06800 -4857 -9557 -9234
BOA 10532 10866 10359
EFM 1245 -9685 -8553
GLK2 6929 2603 -10238
GPRI1 8012 5813 -7065
HHO2 -939 -4267 4581
HHO3 -4238 -7004 5403
HHO5 -5241 -7760 -2009
HHO6 2620 -6657 4530
HRS1 6334 -8671 2502
KAN1 -5794 -9744 -8661
KAN2 3301 -6965 -9630
KAN3 1039 -6717 -6447
KAN4 6743 -5605 3330
MYBC1 -7352 -9745 -5871
MYR1 -6034 -9038 -8865
MYR2 -1131 -8939 -8297
PCL1 -6824 -5851 6999
PHL1 -5735 -8337 764
PHL11 2950 -1046 -1642
PHL12 2563 -7384 -8735
PHL13 -5290 -9046 -7205
PHL6 5940 5381 -1783
PHL7 -1070 -9795 -7268
PHR1 5410 -3425 -9977
UNE16 -4283 -2396 3663



HORMONE_METABOLISM_JASMONATE_INDUCED-REGULATED-RESPONSIVE-ACTIVATED

HORMONE_METABOLISM_JASMONATE_INDUCED-REGULATED-RESPONSIVE-ACTIVATED
metric value
setSize 13
pMANOVA 0.00134
p.adjustMANOVA 0.00439
s.dist 0.721
s.S93 0.391
s.S94 0.581
s.S80 0.171
p.S93 0.0146
p.S94 0.000287
p.S80 0.285




Top 20 genes
Gene S94 S93
JAL34 8425 9387
NSP3 7945 9733
JAL35 7661 9846
PBP2 4648 10151
JAL33 3806 9819
JAL20 3252 7228
JAL10 8631 1000
ESP 7796 498

Click HERE to show all gene set members

All member genes
S93 S94 S80
ATMLP-300B -627 10324 8677
ESP 498 7796 -9182
JAL10 1000 8631 6912
JAL14 6441 -2041 -6597
JAL20 7228 3252 8041
JAL33 9819 3806 -8650
JAL34 9387 8425 2665
JAL35 9846 7661 -4407
JAL8 -366 8668 8901
JAL9 -133 9670 8274
NSP3 9733 7945 2014
NSP5 -8094 7090 7321
PBP2 10151 4648 -2235



PROTEIN_TARGETING_SECRETORY_PATHWAY_ER

PROTEIN_TARGETING_SECRETORY_PATHWAY_ER
metric value
setSize 14
pMANOVA 0.000659
p.adjustMANOVA 0.00236
s.dist 0.718
s.S93 0.455
s.S94 0.219
s.S80 0.511
p.S93 0.00323
p.S94 0.155
p.S80 0.000939




Top 20 genes
Gene S80 S93
ERD2A 10143 10526
AT1G19970 7404 10072
RER1C 8502 6342
AT2G39960 6387 8123
ERO2 8160 6087
ERD2B 5257 7734
AT2G21190 9804 2478
RER1A 2027 7792
RER1B 3039 2635
PVA12 618 8861

Click HERE to show all gene set members

All member genes
S93 S94 S80
AERO1 6663 -597 -3473
AT1G19970 10072 10148 7404
AT1G75760 -3030 2766 4021
AT2G18240 -4241 1461 5006
AT2G21190 2478 7965 9804
AT2G39960 8123 -6237 6387
AT4G38790 -1483 5604 7052
ERD2A 10526 10785 10143
ERD2B 7734 1209 5257
ERO2 6087 7653 8160
PVA12 8861 -2092 618
RER1A 7792 -3773 2027
RER1B 2635 -2014 3039
RER1C 6342 5764 8502



MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C
metric value
setSize 10
pMANOVA 0.0181
p.adjustMANOVA 0.0362
s.dist 0.709
s.S93 0.468
s.S94 0.284
s.S80 0.45
p.S93 0.0104
p.S94 0.12
p.S80 0.0137




Top 20 genes
Gene S93 S80
CCB382 10263 10354
ATG1 9060 9195
CYTC-1 9274 8767
CCB452 9641 7942
CYC12 5611 9562
CYC11 4452 7137

Click HERE to show all gene set members

All member genes
S93 S94 S80
ATG1 9060 9351 9195
CCB206 7946 3783 -2283
CCB382 10263 2800 10354
CCB452 9641 9072 7942
CCMH -5615 -6951 -4203
CCS1 -8391 2109 3883
CYC11 4452 10100 7137
CYC12 5611 10027 9562
CYTC-1 9274 -3684 8767
CYTC-2 8181 -2163 -3951



NOT_ASSIGNED_NO_ONTOLOGY_FORMIN_HOMOLOGY_2_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_FORMIN_HOMOLOGY_2_DOMAIN-CONTAINING_PROTEIN
metric value
setSize 16
pMANOVA 0.000799
p.adjustMANOVA 0.00282
s.dist 0.692
s.S93 -0.195
s.S94 -0.307
s.S80 -0.588
p.S93 0.177
p.S94 0.0336
p.S80 4.59e-05




Top 20 genes
Gene S80 S94
AT5G07770 -10601 -9079
FH2 -9343 -6242
AT5G07760 -7197 -7205
FH19 -5647 -8857
FH1 -10733 -4152
FH10 -3605 -5463
FH14 -8923 -1720
FH9 -3774 -3905
AT5G07650 -6123 -2331
FH6 -8038 -1340
ZOP1 -4043 -2555
FH7 -8361 -637
FH13 -7851 -477
AT2G25050 -4804 -335

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT2G25050 4855 -335 -4804
AT5G07650 -10517 -2331 -6123
AT5G07760 -9598 -7205 -7197
AT5G07770 303 -9079 -10601
FH1 -1379 -4152 -10733
FH10 -8854 -5463 -3605
FH11 -4959 707 -6165
FH13 2070 -477 -7851
FH14 -4139 -1720 -8923
FH19 -10088 -8857 -5647
FH2 949 -6242 -9343
FH5 5708 8236 2734
FH6 3794 -1340 -8038
FH7 -7227 -637 -8361
FH9 4926 -3905 -3774
ZOP1 2021 -2555 -4043



SIGNALLING_14-3-3_PROTEINS

SIGNALLING_14-3-3_PROTEINS
metric value
setSize 11
pMANOVA 0.00732
p.adjustMANOVA 0.018
s.dist 0.682
s.S93 0.45
s.S94 0.211
s.S80 0.467
p.S93 0.00973
p.S94 0.227
p.S80 0.00729




Top 20 genes
Gene S80 S93
GRF9 10042 9547
GRF1 9447 8045
GRF8 9863 5289
GRF3 6026 8589
GRF6 9354 4847
GRF10 4521 5344

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G22290 2864 -91 -5087
GRF1 8045 5216 9447
GRF10 5344 4103 4521
GRF11 3449 -4077 -2070
GRF2 9892 7867 -867
GRF3 8589 -2988 6026
GRF5 -4504 1931 5678
GRF6 4847 2234 9354
GRF7 -5 2409 6123
GRF8 5289 2050 9863
GRF9 9547 10684 10042



CELL_WALL_CELL_WALL_PROTEINS_LRR

CELL_WALL_CELL_WALL_PROTEINS_LRR
metric value
setSize 17
pMANOVA 0.00104
p.adjustMANOVA 0.00353
s.dist 0.68
s.S93 -0.193
s.S94 -0.328
s.S80 -0.563
p.S93 0.168
p.S94 0.0191
p.S80 5.86e-05




Top 20 genes
Gene S80 S94
PEX4 -10050 -10144
AT1G26250 -9764 -8711
LRX1 -9947 -7505
AT2G46630 -10600 -6662
PEX3 -6365 -9192
AT4G06744 -8996 -6466
LRX3 -8278 -5209
AtRLP29 -6771 -5368
AT4G29240 -3522 -5468
LRX5 -9953 -1606
AT1G49490 -1495 -8287
PEX1 -6718 -1025

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G26250 -10528 -8711 -9764
AT1G49490 -6173 -8287 -1495
AT2G19780 9068 4769 -2215
AT2G46630 8744 -6662 -10600
AT4G06744 -1367 -6466 -8996
AT4G28380 -8591 8394 -3487
AT4G29240 -3034 -5468 -3522
AtRLP29 793 -5368 -6771
LRX1 502 -7505 -9947
LRX2 9732 2521 -3807
LRX3 -8712 -5209 -8278
LRX4 -1551 1361 -10386
LRX5 3277 -1606 -9953
LRX6 4534 6523 8096
PEX1 -10520 -1025 -6718
PEX3 -9941 -9192 -6365
PEX4 -10075 -10144 -10050



PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II

PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II
metric value
setSize 14
pMANOVA 4.62e-09
p.adjustMANOVA 9.43e-08
s.dist 0.68
s.S93 0.186
s.S94 0.395
s.S80 -0.521
p.S93 0.228
p.S94 0.0106
p.S80 0.000737




Top 20 genes
Gene S80 S94
LHCB2.2 -10659 9622
LHCB2.1 -10628 8825
LHCB2.4 -10767 8409
LHCB6 -9251 7481
LHCB1.1 -10784 4831
LHCB7 -6868 3834
LHCB3 -10778 2266
LHCB4.3 -6056 1854
LHB1B2 -8384 901

Click HERE to show all gene set members

All member genes
S93 S94 S80
LHB1B1 -1202 1017 4850
LHB1B2 294 901 -8384
LHCB1.1 -9651 4831 -10784
LHCB1.3 5162 5738 2909
LHCB2.1 6924 8825 -10628
LHCB2.2 8147 9622 -10659
LHCB2.4 10227 8409 -10767
LHCB3 2123 2266 -10778
LHCB4.1 -1560 5452 5323
LHCB4.2 4741 -3548 -10718
LHCB4.3 3517 1854 -6056
LHCB5 -4337 8073 2176
LHCB6 -508 7481 -9251
LHCB7 4714 3834 -6868



RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY
metric value
setSize 16
pMANOVA 0.0026
p.adjustMANOVA 0.00784
s.dist 0.675
s.S93 -0.251
s.S94 -0.324
s.S80 -0.536
p.S93 0.0819
p.S94 0.0248
p.S80 0.000205




Top 20 genes
Gene S80 S94
ARF9 -9647 -9474
ARF17 -9114 -8731
ARF20 -9810 -7017
ARF11 -8873 -7291
ARF19 -9967 -6230
ARF6 -9576 -3543
ARF4 -7503 -3966
ARF8 -8693 -3013
ARF10 -8515 -1406
ARF2 -8911 -587
ARF18 -450 -2607

Click HERE to show all gene set members

All member genes
S93 S94 S80
ARF1 3927 2682 -3902
ARF10 -5883 -1406 -8515
ARF11 -2915 -7291 -8873
ARF14 7662 1128 -625
ARF16 -7548 235 -2648
ARF17 -3321 -8731 -9114
ARF18 200 -2607 -450
ARF19 2714 -6230 -9967
ARF2 -1236 -587 -8911
ARF20 -8030 -7017 -9810
ARF3 -6866 -4907 3
ARF4 -5788 -3966 -7503
ARF5 -2521 6434 4677
ARF6 -6226 -3543 -9576
ARF8 -367 -3013 -8693
ARF9 -5535 -9474 -9647



STRESS_BIOTIC_PR-PROTEINS_PLANT_DEFENSINS

STRESS_BIOTIC_PR-PROTEINS_PLANT_DEFENSINS
metric value
setSize 13
pMANOVA 0.000112
p.adjustMANOVA 0.00052
s.dist 0.644
s.S93 0.462
s.S94 0.00204
s.S80 0.448
p.S93 0.0039
p.S94 0.99
p.S80 0.00518




Top 20 genes
Gene S93 S80
AT3G59930 9812 10189
AT5G33355 9963 9905
AT4G22235 9810 10033
EDA21 10118 7960
AT4G22230 10310 5118
AT3G63360 4860 8888
AT4G22214 9775 3992

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G34047 -107 93 8545
AT3G05730 -3763 -395 2106
AT3G59930 9812 10956 10189
AT3G63360 4860 4768 8888
AT4G22212 8854 -8680 -5706
AT4G22214 9775 -7873 3992
AT4G22217 8280 -7631 -4304
AT4G22230 10310 739 5118
AT4G22235 9810 8144 10033
AT5G33355 9963 10937 9905
ATTI1 -10380 -3908 3482
ATTI2 -2800 -6066 -218
EDA21 10118 4762 7960



NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS

NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS
metric value
setSize 55
pMANOVA 2.58e-08
p.adjustMANOVA 4.27e-07
s.dist 0.643
s.S93 -0.27
s.S94 -0.371
s.S80 -0.451
p.S93 0.000537
p.S94 1.89e-06
p.S80 7.39e-09




Top 20 genes
Gene S80 S94
AT5G28630 -10671 -10209
HIPP33 -10660 -10148
AT4G33610 -10761 -9900
AT1G07135 -10595 -9949
AT5G46730 -10475 -9977
AT2G05510 -10643 -9757
AT2G05580 -10498 -9746
AT1G67870 -10726 -9069
AT3G04640 -9742 -9602
AT1G15280 -10124 -9095
AT5G61660 -9009 -10020
AT1G27710 -9463 -9480
GRP5 -9277 -9652
AT1G04660 -9250 -9505
TGD5 -8069 -9852
AT4G08230 -7891 -10035
P23-1 -9573 -7958
OPSL1 -9950 -7358
AT3G59640 -7072 -9397
AT5G49350 -7402 -8914

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G04660 -6559 -9505 -9250
AT1G04800 1084 6784 -10677
AT1G07135 -10268 -9949 -10595
AT1G15280 -9029 -9095 -10124
AT1G27090 -8900 -5383 -327
AT1G27710 -10078 -9480 -9463
AT1G66820 5341 4612 9723
AT1G67870 261 -9069 -10726
AT1G75550 -7074 -2312 -9716
AT2G05510 10668 -9757 -10643
AT2G05540 -3352 -7458 4853
AT2G05580 -8317 -9746 -10498
AT2G15780 6449 2547 -142
AT3G04640 -8676 -9602 -9742
AT3G06780 -953 9159 5963
AT3G29075 1987 -4222 -10569
AT3G59640 -6235 -9397 -7072
AT4G08230 -5896 -10035 -7891
AT4G10330 2922 6331 5048
AT4G15150 8868 -2554 -8950
AT4G17620 -5476 4099 -4311
AT4G18280 -10483 -8050 -5402
AT4G21620 -8654 -8854 7567
AT4G22740 -8186 -7457 -7350
AT4G29020 -6339 5116 -916
AT4G30450 8466 6577 -1101
AT4G30460 7536 8459 -6375
AT4G32920 3086 7815 3423
AT4G33610 -2123 -9900 -10761
AT4G36230 -3111 -5769 -9898
AT4G37682 -5278 6804 -766
AT4G38710 6749 10765 -8106
AT5G11700 -1139 5607 -7475
AT5G17650 -9855 -6231 -4639
AT5G28630 -5835 -10209 -10671
AT5G46730 -8192 -9977 -10475
AT5G47020 -10058 -6695 -428
AT5G49350 -7943 -8914 -7402
AT5G55680 4502 -8299 -6301
AT5G61660 -9541 -10020 -9009
ATGRP9 10212 2218 -229
DOT1 -1095 -3078 -6663
GIF1 10161 1434 1081
GRDP1 -9161 354 278
GRDP2 -10119 1493 5700
GRP18 8204 3037 -3285
GRP23 -1349 -5868 -10636
GRP3 -8243 -6251 4992
GRP3S -2863 -8123 3517
GRP5 1146 -9652 -9277
HIPP33 -9741 -10148 -10660
OPS 1210 -225 -7192
OPSL1 -7201 -7358 -9950
P23-1 -8154 -7958 -9573
TGD5 -7408 -9852 -8069



MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
metric value
setSize 33
pMANOVA 1.34e-06
p.adjustMANOVA 1.32e-05
s.dist 0.643
s.S93 0.499
s.S94 0.222
s.S80 0.34
p.S93 7.11e-07
p.S94 0.0273
p.S80 0.000735




Top 20 genes
Gene S93 S80
NAD2B 10064 7535
NAD4 10238 7390
NAD9 10406 6901
NAD7 10262 6773
AT5G47890 7103 9612
FRO1 7376 8507
AT1G79010 6169 10107
AT5G18800 7445 7665
AT1G16700 6427 8640
NAD5C 10315 5272
AT2G02050 4678 9837
NAD6 6620 6862
AT4G02580 5587 7687
AT2G07751 7334 3745
AT5G52840 7980 3351
NAD1B 8275 2424
AT3G62790 6771 2794
AT3G06310 1951 7750
AT2G20360 2402 5880
NAD2A 10313 1193

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G16700 6427 8952 8640
AT1G49140 -4759 -5379 -3442
AT1G79010 6169 7445 10107
AT2G02050 4678 5425 9837
AT2G07689 7621 -6408 -5577
AT2G07751 7334 -2333 3745
AT2G20360 2402 4565 5880
AT2G47690 6664 -10041 -5413
AT3G03070 5939 -7174 2069
AT3G03100 -1864 -10069 -10084
AT3G06310 1951 -1916 7750
AT3G18410 2999 -7853 -888
AT3G62790 6771 -6184 2794
AT4G02580 5587 5966 7687
AT4G26965 -1658 -1737 -7962
AT5G11770 7250 -2706 -6366
AT5G18800 7445 3410 7665
AT5G47890 7103 7158 9612
AT5G52840 7980 7260 3351
CI51 -2481 9735 3767
DER2.1 -7842 4545 9623
EMB1467 -46 10767 6933
FRO1 7376 -5682 8507
NAD1B 8275 7390 2424
NAD1C 6953 -811 804
NAD2A 10313 9482 1193
NAD2B 10064 9625 7535
NAD4 10238 9421 7390
NAD5A 10408 7418 785
NAD5C 10315 10869 5272
NAD6 6620 9141 6862
NAD7 10262 10852 6773
NAD9 10406 10855 6901



RNA_REGULATION_OF_TRANSCRIPTION_AUX/IAA_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_AUX/IAA_FAMILY
metric value
setSize 22
pMANOVA 4.93e-05
p.adjustMANOVA 0.000272
s.dist 0.642
s.S93 0.558
s.S94 0.311
s.S80 0.0666
p.S93 5.8e-06
p.S94 0.0116
p.S80 0.589




Top 20 genes
Gene S93 S94
IAA19 10176 10412
IAA7 9219 9890
IAA17 7439 9499
IAA14 8770 7371
IAA30 8025 5762
SHY2 8617 5081
IAA8 4023 10026
IAA9 4418 8883
IAA6 9559 2325
IAA2 8532 2448
IAA4 6406 2590
IAA12 3982 4059
IAA13 1538 8122
IAA18 7114 1382
IAA16 9037 1030
IAA29 9277 881
IAA10 717 1625

Click HERE to show all gene set members

All member genes
S93 S94 S80
IAA1 9493 -3140 -4758
IAA10 717 1625 -1456
IAA11 -425 342 5428
IAA12 3982 4059 -5773
IAA13 1538 8122 -524
IAA14 8770 7371 -5128
IAA16 9037 1030 -563
IAA17 7439 9499 -2374
IAA18 7114 1382 6344
IAA19 10176 10412 -4617
IAA2 8532 2448 951
IAA26 2062 -2989 -357
IAA28 6710 -474 -447
IAA29 9277 881 5816
IAA30 8025 5762 5492
IAA32 -2754 -3029 1734
IAA4 6406 2590 6096
IAA6 9559 2325 -5315
IAA7 9219 9890 5479
IAA8 4023 10026 4871
IAA9 4418 8883 5379
SHY2 8617 5081 -3966



SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_X

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_X
metric value
setSize 12
pMANOVA 0.000263
p.adjustMANOVA 0.00109
s.dist 0.634
s.S93 -0.264
s.S94 0.484
s.S80 0.312
p.S93 0.113
p.S94 0.00367
p.S80 0.0615




Top 20 genes
Gene S94 S80
PSKR2 10167 9660
PSKR1 9818 9769
BIR1 8282 9310
BIR2 9244 6772
AT1G27190 9358 4762
EMS1 9036 3763
AT1G69990 6397 3937

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G27190 -2474 9358 4762
AT1G34420 6971 3329 -4432
AT1G69990 -8425 6397 3937
AT5G42440 -5093 -5390 -2378
BIR1 -222 8282 9310
BIR2 -4518 9244 6772
BRL1 -7514 -492 818
EMS1 -3243 9036 3763
PSKR1 -5925 9818 9769
PSKR2 -1207 10167 9660
PSY1R 139 1474 -3777
PXC3 -1453 5721 -196



LIPID_METABOLISM_PHOSPHOLIPID_SYNTHESIS

LIPID_METABOLISM_PHOSPHOLIPID_SYNTHESIS
metric value
setSize 16
pMANOVA 0.0133
p.adjustMANOVA 0.0277
s.dist 0.626
s.S93 0.224
s.S94 0.454
s.S80 0.368
p.S93 0.121
p.S94 0.00166
p.S80 0.0108




Top 20 genes
Gene S94 S80
ATGPAT3 10864 9750
GPAT4 11002 8311
GPAT7 9858 8100
GPAT8 10152 7145
GPAT5 8718 7553
CLS 7419 8863
GPAT1 6191 7513
NMT2 7288 3189
LCKB2 2995 6222
GPAT2 10921 515
PGPS1 2075 1573

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G15110 6806 -553 -1008
AT1G73600 8761 7023 -5140
AT3G05510 -1844 -6609 -4318
ATGPAT3 448 10864 9750
CLS 8690 7419 8863
GPAT1 6955 6191 7513
GPAT2 -110 10921 515
GPAT4 6923 11002 8311
GPAT5 -5396 8718 7553
GPAT6 2806 2135 -4571
GPAT7 4939 9858 8100
GPAT8 2827 10152 7145
LCKB2 -4245 2995 6222
NMT1 -2596 -5359 6588
NMT2 3253 7288 3189
PGPS1 861 2075 1573



PROTEIN_SYNTHESIS_ELONGATION

PROTEIN_SYNTHESIS_ELONGATION
metric value
setSize 29
pMANOVA 6.98e-06
p.adjustMANOVA 5.14e-05
s.dist 0.626
s.S93 0.00226
s.S94 0.458
s.S80 0.427
p.S93 0.983
p.S94 1.99e-05
p.S80 6.9e-05




Top 20 genes
Gene S94 S80
A1 11069 10492
LOS1 10969 10047
AT1G57720 10314 10408
AT5G19510 9709 10315
AT1G09640 9652 10134
TUFA 10279 9173
AT1G30230 8346 10182
AT4G10480 9719 8687
TFIIS 9129 9055
AT2G31060 8035 9357
AT2G18110 5960 8487
AT3G22980 6898 6395
AT3G08740 5285 8298
CLO 8849 3443
NACA2 6334 4685
AT5G12110 10763 2001
EFTS 4937 4015
MEFG2 5651 3117
ACR7 6459 2561
AT5G13650 162 1177

Click HERE to show all gene set members

All member genes
S93 S94 S80
A1 10694 11069 10492
ACR7 -5246 6459 2561
AT1G09640 8812 9652 10134
AT1G30230 8366 8346 10182
AT1G57720 6782 10314 10408
AT2G18110 4713 5960 8487
AT2G31060 -3145 8035 9357
AT3G08740 -2717 5285 8298
AT3G12390 -699 -9375 -5466
AT3G12915 4220 3845 -482
AT3G22980 -7125 6898 6395
AT4G10480 7779 9719 8687
AT4G26310 -7162 -523 8954
AT5G10630 -912 5524 -828
AT5G12110 10567 10763 2001
AT5G13650 -5250 162 1177
AT5G19510 9537 9709 10315
ATRNL -10226 -4129 -5607
CLO 1536 8849 3443
CPEFG -1970 9769 -1433
EFTS 2725 4937 4015
emb2726 -9415 3063 -2823
GFL -3733 -9458 -3706
LOS1 3067 10969 10047
MEFG1 -9520 -3810 -3368
MEFG2 -7839 5651 3117
NACA2 -3545 6334 4685
TFIIS -2847 9129 9055
TUFA 5076 10279 9173



RNA_REGULATION_OF_TRANSCRIPTION_MADS_BOX_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_MADS_BOX_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 28
pMANOVA 0.000153
p.adjustMANOVA 0.000689
s.dist 0.625
s.S93 -0.183
s.S94 -0.478
s.S80 -0.359
p.S93 0.0945
p.S94 1.19e-05
p.S80 0.00102




Top 20 genes
Gene S94 S80
SOC1 -10178 -10586
AGL71 -10124 -10394
ANR1 -10024 -10464
AGL42 -9064 -10148
AGL19 -9781 -9133
AGL16 -10021 -8897
AGL21 -8700 -8393
AGL31 -8395 -8631
AGL65 -7062 -7912
AGL87 -8539 -5014
MAF3 -7356 -5366
AGL17 -6624 -4521
AT5G49420 -4134 -5580
AGL12 -2729 -6036
SEP3 -5770 -2373
AGL14 -1986 -3877
MAF4 -6305 -1076
AGL62 -3006 -1914
FLC -1431 -2232
AGL80 -1499 -720

Click HERE to show all gene set members

All member genes
S93 S94 S80
AGL102 -8715 -7683 -54
AGL12 3064 -2729 -6036
AGL14 9431 -1986 -3877
AGL16 -3976 -10021 -8897
AGL17 -7890 -6624 -4521
AGL18 10056 4620 6357
AGL19 -2806 -9781 -9133
AGL21 -2405 -8700 -8393
AGL24 3427 6539 -4667
AGL3 5598 3922 -3180
AGL31 3641 -8395 -8631
AGL42 -5101 -9064 -10148
AGL62 1934 -3006 -1914
AGL65 -7088 -7062 -7912
AGL71 -8338 -10124 -10394
AGL80 -4132 -1499 -720
AGL87 -8122 -8539 -5014
ANR1 -9661 -10024 -10464
AT3G49400 -5974 -368 -652
AT5G49420 -9971 -4134 -5580
FLC 5192 -1431 -2232
MAF1 4697 -5323 4463
MAF3 588 -7356 -5366
MAF4 -9094 -6305 -1076
MAF5 -10456 -9222 2733
SEP1 8673 9963 7389
SEP3 1888 -5770 -2373
SOC1 -7023 -10178 -10586



NOT_ASSIGNED_NO_ONTOLOGY_AGENET_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_AGENET_DOMAIN-CONTAINING_PROTEIN
metric value
setSize 15
pMANOVA 0.00884
p.adjustMANOVA 0.0202
s.dist 0.616
s.S93 -0.466
s.S94 -0.245
s.S80 -0.32
p.S93 0.00177
p.S94 0.1
p.S80 0.0317




Top 20 genes
Gene S93 S80
DUF7 -6992 -8097
AT2G25590 -7983 -6999
DUF6 -6597 -7814
DUF8 -5006 -10248
DUF2 -3901 -7361
AT5G52070 -4919 -5719
ATG2484-1 -2535 -9638
AT4G32440 -9496 -2130
DUF3 -4276 -3254
ATDUF10 -4905 -1950
AT1G09320 -7528 -1236

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G09320 -7528 2296 -1236
AT2G25590 -7983 -1091 -6999
AT3G06520 -4262 5195 2573
AT4G32440 -9496 -1384 -2130
AT5G20030 -6299 -7917 4196
AT5G42670 -1917 5097 1685
AT5G52070 -4919 316 -5719
ATDUF10 -4905 -6457 -1950
ATG2484-1 -2535 1154 -9638
DUF2 -3901 -3423 -7361
DUF3 -4276 -4476 -3254
DUF6 -6597 -8244 -7814
DUF7 -6992 -2675 -8097
DUF8 -5006 -6326 -10248
DUF9 3213 -4721 2661



RNA_REGULATION_OF_TRANSCRIPTION_TRIHELIX,_TRIPLE-HELIX_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_TRIHELIX,_TRIPLE-HELIX_TRANSCRIPTION_FACTOR_FAMILY
metric value
setSize 29
pMANOVA 2.72e-05
p.adjustMANOVA 0.000168
s.dist 0.614
s.S93 -0.144
s.S94 -0.288
s.S80 -0.523
p.S93 0.18
p.S94 0.00727
p.S80 1.07e-06




Top 20 genes
Gene S80 S94
AT-GTL1 -9776 -9243
AT1G76880 -9190 -8651
PTL -9220 -8025
ASIL2 -9639 -7178
AT1G11850 -7167 -8836
AT4G31270 -6388 -9411
AT3G24860 -7461 -6799
AT3G01560 -9655 -4981
AT2G44730 -8720 -4992
UGLYAH -4992 -8505
GT-2 -6109 -6255
GT-3B -8643 -4409
EDA31 -8731 -3821
AT5G28300 -7751 -4083
GT-1 -3173 -8001
AT5G14540 -7209 -2919
AT3G58630 -1611 -513

Click HERE to show all gene set members

All member genes
S93 S94 S80
ASIL1 -3767 6553 -6486
ASIL2 -6230 -7178 -9639
AT-GTL1 -1837 -9243 -9776
AT1G11850 349 -8836 -7167
AT1G21200 -7302 1358 -5784
AT1G31310 3615 -968 1102
AT1G76880 2259 -8651 -9190
AT2G44730 -8157 -4992 -8720
AT3G01560 -1641 -4981 -9655
AT3G10040 9177 499 -7332
AT3G11100 -8611 4334 2484
AT3G24490 -458 5728 -6092
AT3G24860 2411 -6799 -7461
AT3G54390 5140 8069 -6425
AT3G58630 6377 -513 -1611
AT4G29030 3088 4550 -6139
AT4G31270 -538 -9411 -6388
AT5G05550 1405 2992 1751
AT5G14540 359 -2919 -7209
AT5G28300 2010 -4083 -7751
AT5G47660 -56 2128 -3558
EDA31 -1259 -3821 -8731
GT-1 -4712 -8001 -3173
GT-2 -4015 -6255 -6109
GT-3A -4632 4219 -4272
GT-3B -8956 -4409 -8643
GT-4 -6627 -9170 631
PTL -1868 -8025 -9220
UGLYAH -8028 -8505 -4992



CELL_WALL_CELL_WALL_PROTEINS_AGPS_AGP

CELL_WALL_CELL_WALL_PROTEINS_AGPS_AGP
metric value
setSize 39
pMANOVA 2.14e-14
p.adjustMANOVA 1.89e-12
s.dist 0.611
s.S93 0.566
s.S94 -0.189
s.S80 -0.132
p.S93 9.5e-10
p.S94 0.0415
p.S80 0.155




Top 20 genes
Gene S93 S94
AGP3 8924 -8925
AGP7 10078 -7284
AGP4 10486 -6906
AGP10 7225 -8820
AGP9 10331 -4455
AGP14 10062 -4528
FLA4 6285 -7060
FLA12 5526 -7597
AGP16 4555 -7448
AGP18 10596 -2859
FLA6 9785 -3035
AGP19 3025 -7107
FLA7 9556 -1605
FLA8 8037 -1615
AT4G16980 6267 -1528
FLA11 1092 -6306
FLA15 2700 -1657
AGP13 10350 -223
AGP20 6178 -323
FLA5 273 -4868

Click HERE to show all gene set members

All member genes
S93 S94 S80
AGP1 9737 8554 9729
AGP10 7225 -8820 -10690
AGP12 9477 6457 8615
AGP13 10350 -223 3547
AGP14 10062 -4528 5318
AGP16 4555 -7448 -3037
AGP17 -8683 -8862 -4145
AGP18 10596 -2859 -4219
AGP19 3025 -7107 -10125
AGP2 8110 966 9780
AGP20 6178 -323 3662
AGP21 10219 8039 10471
AGP22 10327 7011 7764
AGP24 10306 9949 10440
AGP25 -7 -9793 -10705
AGP26 -8869 -9091 -5599
AGP27 -4556 -9248 -10402
AGP3 8924 -8925 -8864
AGP4 10486 -6906 -8142
AGP5 9343 290 3132
AGP7 10078 -7284 -4153
AGP9 10331 -4455 -1619
APG -412 -57 6082
AT4G16980 6267 -1528 -4239
FLA1 9914 6779 -1739
FLA10 9679 3307 -1656
FLA11 1092 -6306 -7872
FLA12 5526 -7597 -8896
FLA13 9536 10336 -104
FLA15 2700 -1657 -8305
FLA17 3066 4866 -195
FLA18 -895 -4398 -10028
FLA2 8998 7567 -5199
FLA4 6285 -7060 -10672
FLA5 273 -4868 -7146
FLA6 9785 -3035 8857
FLA7 9556 -1605 -1666
FLA8 8037 -1615 -3879
FLA9 10256 18 5616



SIGNALLING_RECEPTOR_KINASES_PROLINE_EXTENSIN_LIKE

SIGNALLING_RECEPTOR_KINASES_PROLINE_EXTENSIN_LIKE
metric value
setSize 15
pMANOVA 0.00779
p.adjustMANOVA 0.0188
s.dist 0.604
s.S93 -0.294
s.S94 -0.231
s.S80 -0.474
p.S93 0.0483
p.S94 0.122
p.S80 0.00147




Top 20 genes
Gene S80 S93
EXT2 -10663 -7654
PERK1 -7375 -9659
PERK4 -9421 -6854
PERK12 -7971 -7816
PERK14 -9159 -5176
AT3G13690 -5486 -7236
PERK9 -7799 -3669
PERK10 -10641 -2265
AT1G70450 -2481 -2217
PERK13 -2699 -1898

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G55200 7120 8876 8656
AT1G70450 -2217 1630 -2481
AT3G13690 -7236 -1071 -5486
AT3G24540 -7713 -6818 514
AT5G56790 -1592 5909 3602
EXT2 -7654 -9028 -10663
PERK1 -9659 -7459 -7375
PERK10 -2265 -6433 -10641
PERK12 -7816 -3902 -7971
PERK13 -1898 -454 -2699
PERK14 -5176 -8562 -9159
PERK15 7676 4934 -10112
PERK4 -6854 -8699 -9421
PERK8 2923 2955 -6856
PERK9 -3669 -2261 -7799



PROTEIN_DEGRADATION_UBIQUITIN_PROTEASOM

PROTEIN_DEGRADATION_UBIQUITIN_PROTEASOM
metric value
setSize 59
pMANOVA 7.3e-10
p.adjustMANOVA 2.15e-08
s.dist 0.603
s.S93 0.237
s.S94 0.254
s.S80 0.493
p.S93 0.00163
p.S94 0.000721
p.S80 5.63e-11




Top 20 genes
Gene S80 S94
PAE2 10430 11062
PBC2 10076 10560
RPN11 9923 9874
RPT4B 9368 10161
PBE1 10009 9352
RPN6 8996 10369
AT3G02200 10117 8979
PAF1 9399 9315
PBE2 9183 9493
RPN7 9366 8676
RPT6B 8513 9429
AT5G53540 8546 9045
PAC1 9074 7877
RPT1A 7350 8364
AT5G38650 9205 6328
RPN12A 9045 6350
RPT6A 7420 7356
PBG1 9278 5703
PBD1 10147 4998
RPN3A 5855 8583

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G53780 -7493 -8726 -4840
AT1G67250 6758 4736 9155
AT3G02200 8442 8979 10117
AT3G03060 5608 -1679 -3424
AT3G15180 4959 866 4123
AT3G53970 4549 5154 5235
AT4G19006 9751 1480 7815
AT5G15610 3575 2705 6774
AT5G38650 -89 6328 9205
AT5G53540 7876 9045 8546
AT5G57950 -141 -8061 -6641
EER5 -1639 5815 8397
EMB2107 1442 6949 2976
PAA1 2670 1120 4214
PAA2 -10420 -9567 -3009
PAB2 1023 -5018 -2655
PAC1 8491 7877 9074
PAD2 5319 -3703 2369
PAE1 6867 2479 8665
PAE2 8896 11062 10430
PAF1 8759 9315 9399
PAF2 -4956 -529 2436
PAG1 3321 7615 6018
PBA1 5125 -4385 2183
PBB1 5491 -914 7337
PBB2 1296 -4790 7598
PBC1 3786 1433 8297
PBC2 10530 10560 10076
PBD1 8571 4998 10147
PBD2 4150 -6512 3083
PBE1 6718 9352 10009
PBE2 6889 9493 9183
PBF1 4202 -7296 -730
PBG1 6336 5703 9278
RPN11 7338 9874 9923
RPN12A 8125 6350 9045
RPN1A -2480 9621 4279
RPN1B 2229 8500 3850
RPN2A -2791 5432 -2683
RPN2B -5708 1947 187
RPN3A 3339 8583 5855
RPN3B 4425 2120 3302
RPN5B 4859 1965 4086
RPN6 3381 10369 8996
RPN7 3456 8676 9366
RPN8A 5008 -3772 -922
RPN8B 289 520 6536
RPN9A 1116 -1628 4040
RPT1A 3604 8364 7350
RPT2A -4870 8103 1036
RPT2B -803 5887 3459
RPT3 -9011 -8615 -3780
RPT4A -4505 2714 1784
RPT4B 2766 10161 9368
RPT5A -2271 4755 3779
RPT5B -8680 -8379 4709
RPT6A -672 7356 7420
RPT6B -1084 9429 8513
TIF3F1 8417 4376 9630



TRANSPORT_CALCIUM

TRANSPORT_CALCIUM
metric value
setSize 21
pMANOVA 4.62e-06
p.adjustMANOVA 3.72e-05
s.dist 0.6
s.S93 -0.245
s.S94 0.418
s.S80 0.355
p.S93 0.0521
p.S94 0.000915
p.S80 0.0049




Top 20 genes
Gene S94 S80
CCX5 10023 8214
TPC1 9377 8538
CAX3 7525 9416
ACA1 10252 5933
ECA4 9819 5937
CCX1 7388 7422
ECA1 7402 6989
CAX2 10727 4274
CCX2 3295 8190
CAX4 8127 2017
ECA2 7764 2081
GRXS14 9847 1007
ACA8 1058 4640
CCX3 1297 3197
EAAC 266 5821

Click HERE to show all gene set members

All member genes
S93 S94 S80
ACA1 -122 10252 5933
ACA8 -8850 1058 4640
AT1G54110 5506 -8930 -2789
CAX1 -10465 -3891 4221
CAX2 5756 10727 4274
CAX3 -6332 7525 9416
CAX4 -4719 8127 2017
CAX5 -5664 -2561 -3604
CCX1 -1339 7388 7422
CCX2 -9469 3295 8190
CCX3 -8438 1297 3197
CCX5 1353 10023 8214
CXIP4 -2287 9025 -9323
EAAC -4500 266 5821
ECA1 -7261 7402 6989
ECA2 -10 7764 2081
ECA3 -2046 6551 -520
ECA4 907 9819 5937
GRXS14 8592 9847 1007
GRXS16 -4097 -2082 4401
TPC1 145 9377 8538



PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_SNORNAS

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_SNORNAS
metric value
setSize 14
pMANOVA 0.00551
p.adjustMANOVA 0.0146
s.dist 0.596
s.S93 0.289
s.S94 0.177
s.S80 0.491
p.S93 0.0611
p.S94 0.252
p.S80 0.00148




Top 20 genes
Gene S80 S93
AT4G39366 9997 10265
AT1G74453 8279 9600
AT2G05765 8319 9267
AT4G39361 6459 7482
AT3G47348 8462 4872
AT3G50825 4464 8211
AT4G39363 8011 4300
AT1G75166 4027 6403
AT4G39364 6811 1913
AT2G20721 1507 250

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G74453 9600 7078 8279
AT1G74456 -4616 -957 3966
AT1G75166 6403 6010 4027
AT2G05765 9267 3185 8319
AT2G20721 250 2937 1507
AT2G20723 -3660 -2182 673
AT2G35744 -2121 -6834 -2571
AT3G47347 -8251 -9041 2576
AT3G47348 4872 690 8462
AT3G50825 8211 3498 4464
AT4G39361 7482 8484 6459
AT4G39363 4300 5048 8011
AT4G39364 1913 4064 6811
AT4G39366 10265 10356 9997



PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_SNORNPS

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_SNORNPS
metric value
setSize 14
pMANOVA 0.0286
p.adjustMANOVA 0.0534
s.dist 0.59
s.S93 0.39
s.S94 0.265
s.S80 0.355
p.S93 0.0116
p.S94 0.0857
p.S80 0.0215




Top 20 genes
Gene S93 S80
AT5G08180 9804 10178
NOP5-2 9446 9820
AT4G22380 6421 9470
AT3G12860 6290 6639
NOP10 6556 4930
CBF5 8099 3826
AT5G18180 7272 3853
AT2G40700 5128 5031
AT3G06530 1161 7952
NUCL2 69 1621

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT2G40700 5128 -563 5031
AT3G03920 2352 -6442 -1785
AT3G06530 1161 10099 7952
AT3G12860 6290 1830 6639
AT4G08760 293 9211 -3952
AT4G22380 6421 131 9470
AT5G08180 9804 9202 10178
AT5G18180 7272 5197 3853
AT5G66540 3537 -3667 -9139
CBF5 8099 9678 3826
NOP10 6556 -9749 4930
NOP5-2 9446 8164 9820
NUCL1 -7511 6892 2324
NUCL2 69 5501 1621



MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE
metric value
setSize 10
pMANOVA 6.94e-05
p.adjustMANOVA 0.000347
s.dist 0.589
s.S93 0.457
s.S94 -0.342
s.S80 0.145
p.S93 0.0123
p.S94 0.0609
p.S80 0.428




Top 20 genes
Gene S93 S94
AT1G15120 8716 -8696
AT3G52730 7101 -9110
QCR7-1 7147 -8236
AT5G05370 6193 -9042
AT3G10860 3734 -10090

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G15120 8716 -8696 -690
AT1G36380 -3769 -9130 -4643
AT2G07727 10116 10477 8523
AT3G10860 3734 -10090 -6556
AT3G52730 7101 -9110 -2145
AT5G05370 6193 -9042 -1777
QCR7-1 7147 -8236 1819
QCR7-2 -1796 504 3119
UCR1-1 9344 4671 10091
UCR1-2 2455 6532 6168



SIGNALLING_RECEPTOR_KINASES_WHEAT_LRK10_LIKE

SIGNALLING_RECEPTOR_KINASES_WHEAT_LRK10_LIKE
metric value
setSize 12
pMANOVA 0.0345
p.adjustMANOVA 0.0631
s.dist 0.584
s.S93 -0.112
s.S94 -0.302
s.S80 -0.487
p.S93 0.503
p.S94 0.0704
p.S80 0.00349




Top 20 genes
Gene S80 S94
LRK10L-1.1 -9330 -9139
LRK10L-2.8 -8880 -4391
AT5G38210 -6720 -5571
LRK10L-2.7 -4256 -7299
LRK10L-1.5 -5845 -4822
LRK10L-2.1 -4978 -5580
AT1G18390 -2273 -4718
LRK10L-2.4 -7169 -728
LRK10L-2.5 -587 -5619

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G18390 -8960 -4718 -2273
AT1G66880 10058 6601 -4937
AT5G38210 4274 -5571 -6720
AT5G38240 6071 7330 -8086
LRK10L-1.1 -8833 -9139 -9330
LRK10L-1.5 -3549 -4822 -5845
LRK10L-2.1 3788 -5580 -4978
LRK10L-2.3 7629 577 -858
LRK10L-2.4 -6581 -728 -7169
LRK10L-2.5 -9859 -5619 -587
LRK10L-2.7 -9799 -7299 -4256
LRK10L-2.8 2267 -4391 -8880



PROTEIN_ASSEMBLY_AND_COFACTOR_LIGATION

PROTEIN_ASSEMBLY_AND_COFACTOR_LIGATION
metric value
setSize 23
pMANOVA 0.000482
p.adjustMANOVA 0.00188
s.dist 0.582
s.S93 0.0537
s.S94 0.3
s.S80 0.495
p.S93 0.656
p.S94 0.0127
p.S80 3.91e-05




Top 20 genes
Gene S80 S94
YCF3 10394 10441
ABCI6 8196 10800
CCSA 10146 8436
APO1 7878 6991
NIFU4 7979 6644
FKBP13 8495 6210
NIFU1 9078 5135
ycf2-B 4210 11059
YCF4 3654 10178
HCF136 5131 5865
NIFU2 8337 2760
ENH1 4158 4985
HCF164 2211 6193
NIFU3 2556 4863
CCB1 3691 3287

Click HERE to show all gene set members

All member genes
S93 S94 S80
ABCI6 1423 10800 8196
ABCI8 -3406 2598 -7763
APO1 -3499 6991 7878
AT1G54500 5055 -3378 7118
CCB1 -2795 3287 3691
CCB4 -6221 -1829 5850
CcdA -6459 -3694 2353
CCSA 10658 8436 10146
ENH1 219 4985 4158
FKBP13 -3905 6210 8495
HCF101 -1883 5252 -367
HCF136 -4848 5865 5131
HCF164 -3221 6193 2211
ISU1 -5257 -6767 6576
NIFU1 2671 5135 9078
NIFU2 -5259 2760 8337
NIFU3 4168 4863 2556
NIFU4 -515 6644 7979
NIFU5 -3423 -2848 -1303
YCF1.2 9758 -9957 9115
ycf2-B 10685 11059 4210
YCF3 10641 10441 10394
YCF4 9979 10178 3654



SECONDARY_METABOLISM_SIMPLE_PHENOLS

SECONDARY_METABOLISM_SIMPLE_PHENOLS
metric value
setSize 16
pMANOVA 0.00845
p.adjustMANOVA 0.02
s.dist 0.578
s.S93 -0.157
s.S94 -0.259
s.S80 -0.493
p.S93 0.278
p.S94 0.0731
p.S80 0.000644




Top 20 genes
Gene S80 S94
LAC13 -10709 -9667
LAC7 -9916 -9659
LAC6 -9357 -9211
LAC3 -8294 -8300
LAC5 -9022 -6413
LAC16 -6828 -6871
IRX12 -10267 -4285
LAC2 -9525 -4277
LAC10 -9730 -3620
LAC17 -9062 -1238
LAC12 -6135 -1108

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G33030 -4209 -488 4673
IGMT5 10583 10894 7078
IRX12 -4361 -4285 -10267
LAC1 7145 5371 -2007
LAC10 5182 -3620 -9730
LAC11 -4461 6287 6139
LAC12 2454 -1108 -6135
LAC13 -9090 -9667 -10709
LAC16 -5119 -6871 -6828
LAC17 -2983 -1238 -9062
LAC2 -7616 -4277 -9525
LAC3 -5116 -8300 -8294
LAC5 -3389 -6413 -9022
LAC6 -3840 -9211 -9357
LAC7 -10562 -9659 -9916
LAC8 9738 5401 -3228



SIGNALLING_RECEPTOR_KINASES_WALL_ASSOCIATED_KINASE

SIGNALLING_RECEPTOR_KINASES_WALL_ASSOCIATED_KINASE
metric value
setSize 22
pMANOVA 0.00482
p.adjustMANOVA 0.0129
s.dist 0.577
s.S93 -0.411
s.S94 -0.307
s.S80 -0.265
p.S93 0.000851
p.S94 0.0128
p.S80 0.0314




Top 20 genes
Gene S93 S94
WAK4 -10556 -10080
WAKL13 -10365 -9873
WAKL10 -9954 -9943
WAKL21 -7849 -9316
WAKL2 -10388 -6844
WAK5 -9564 -6561
WAKL5 -10466 -5658
WAKL15 -9505 -5919
WAK2 -7519 -5071
WAKL11 -10411 -3327
WAKL6 -3353 -9337
WAKL1 -8454 -1213
WAKL22 -10198 -538

Click HERE to show all gene set members

All member genes
S93 S94 S80
WAK1 9338 7495 -609
WAK2 -7519 -5071 -6685
WAK3 6140 3339 6287
WAK4 -10556 -10080 -8989
WAK5 -9564 -6561 899
WAKL1 -8454 -1213 -6681
WAKL10 -9954 -9943 -4592
WAKL11 -10411 -3327 -6674
WAKL13 -10365 -9873 -7844
WAKL14 -8560 2003 4741
WAKL15 -9505 -5919 -9176
WAKL17 4455 1357 -6465
WAKL18 5547 -992 -4887
WAKL2 -10388 -6844 -6238
WAKL20 1126 31 7773
WAKL21 -7849 -9316 -1615
WAKL22 -10198 -538 1292
WAKL4 -9342 2969 3402
WAKL5 -10466 -5658 -3450
WAKL6 -3353 -9337 -6607
WAKL8 9323 -25 -761
WAKL9 5876 5228 -8366



PS_LIGHTREACTION_NADH_DH

PS_LIGHTREACTION_NADH_DH
metric value
setSize 12
pMANOVA 0.00058
p.adjustMANOVA 0.00217
s.dist 0.546
s.S93 0.342
s.S94 -0.0822
s.S80 0.417
p.S93 0.0401
p.S94 0.622
p.S80 0.0123




Top 20 genes
Gene S80 S93
NDHC 10400 10683
NDHF 10299 10543
NDHK 9386 10640
NDHJ 10081 9469
NDHD 8773 9396
NDHG 7210 10578

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT4G37920 -4783 -8891 4718
CRR3 -7009 -7763 180
NDHC 10683 3007 10400
NDHD 9396 10568 8773
NDHF 10543 3348 10299
NDHG 10578 10686 7210
NDHJ 9469 5200 10081
NDHK 10640 -5387 9386
ndhL -2846 -7959 -4247
NDHM -2972 -3730 -2192
ndhN -1586 253 3507
ndhO 2323 -4692 -6654



PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION

PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION
metric value
setSize 12
pMANOVA 0.0361
p.adjustMANOVA 0.0655
s.dist 0.546
s.S93 0.389
s.S94 0.376
s.S80 0.0727
p.S93 0.0197
p.S94 0.0242
p.S80 0.663




Top 20 genes
Gene S93 S94
NDHI 10520.0 10734.0
NDHE 10126.0 10434.0
NDHA 9438.0 10526.0
NDHB.1 9074.5 10555.5
NDHB.2 9074.5 10555.5
NDHH 9720.0 9195.0
PGRL1A 3371.0 6580.0

Click HERE to show all gene set members

All member genes
S93 S94 S80
AOX4 -4510.0 2197.0 3037.0
NDF2 -6078.0 -6028.0 -8304.0
NDHA 9438.0 10526.0 1169.0
NDHB.1 9074.5 10555.5 6186.5
NDHB.2 9074.5 10555.5 6186.5
NDHE 10126.0 10434.0 9170.0
NDHH 9720.0 9195.0 -1033.0
NDHI 10520.0 10734.0 9451.0
PGR5 5589.0 -1279.0 -8180.0
PGRL1A 3371.0 6580.0 -6362.0
PGRL1B 2651.0 -1799.0 -5977.0
PIFI -8590.0 -8577.0 2155.0



SIGNALLING_RECEPTOR_KINASES_CATHARANTHUS_ROSEUS-LIKE_RLK1

SIGNALLING_RECEPTOR_KINASES_CATHARANTHUS_ROSEUS-LIKE_RLK1
metric value
setSize 15
pMANOVA 0.000349
p.adjustMANOVA 0.0014
s.dist 0.545
s.S93 -0.516
s.S94 0.0527
s.S80 -0.166
p.S93 0.000534
p.S94 0.724
p.S80 0.266




Top 20 genes
Gene S93 S80
ANX1 -9203 -8736
AT5G39030 -8743 -8055
AT5G39000 -9430 -6451
AT5G39020 -10303 -5630
AT5G24010 -6912 -4896
AT5G59700 -10366 -2728
AT2G39360 -5717 -837

Click HERE to show all gene set members

All member genes
S93 S94 S80
ANX1 -9203 -4293 -8736
AT2G23200 1672 4621 2804
AT2G39360 -5717 5306 -837
AT4G39110 15 -2354 -4486
AT5G24010 -6912 125 -4896
AT5G38990 4962 8041 -2568
AT5G39000 -9430 -2009 -6451
AT5G39020 -10303 -9606 -5630
AT5G39030 -8743 -5530 -8055
AT5G59700 -10366 674 -2728
AT5G61350 -2799 1883 1639
FER -8311 582 1607
HERK1 -4609 9693 3752
HERK2 -3832 8702 3314
THE1 -7847 -1011 2603



RNA_REGULATION_OF_TRANSCRIPTION_SNF7

RNA_REGULATION_OF_TRANSCRIPTION_SNF7
metric value
setSize 12
pMANOVA 0.0734
p.adjustMANOVA 0.118
s.dist 0.541
s.S93 -0.229
s.S94 -0.437
s.S80 -0.223
p.S93 0.17
p.S94 0.00883
p.S80 0.182




Top 20 genes
Gene S94 S93
VPS60.2 -7785 -6782
VPS2.1 -8947 -5557
VPS24-1 -9670 -3346
VPS20.1 -7397 -4162
VPS2.3 -9147 -3124
VPS32.1 -9409 -403

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT3G62080 -9341 1728 -2694
CHMP1A 5016 -2259 5945
CHMP1B -8300 4599 7992
VPS2.1 -5557 -8947 -10533
VPS2.2 9242 -2264 1631
VPS2.3 -3124 -9147 -10201
VPS20.1 -4162 -7397 -289
VPS24-1 -3346 -9670 -10427
VPS32.1 -403 -9409 -7605
VPS32.2 748 -3978 -7187
VPS60.1 -2448 3949 4253
VPS60.2 -6782 -7785 -1058



RNA_REGULATION_OF_TRANSCRIPTION_C2C2(ZN)_DOF_ZINC_FINGER_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_C2C2(ZN)_DOF_ZINC_FINGER_FAMILY
metric value
setSize 31
pMANOVA 9.1e-07
p.adjustMANOVA 1.1e-05
s.dist 0.534
s.S93 0.234
s.S94 -0.265
s.S80 -0.4
p.S93 0.0239
p.S94 0.0107
p.S80 0.000116




Top 20 genes
Gene S80 S94
DOF2.5 -10592 -9244
DOF5.3 -9389 -9212
DOF2.2 -9063 -9150
DAG1 -7381 -10000
DOF4.6 -9119 -7821
DOF5.7 -8612 -7802
AT1G28310 -7322 -9092
DOF2.4 -7362 -7612
DOF1.6 -7716 -7042
OBP3 -8494 -6267
DOF3.1 -3258 -7906
OBP2 -5620 -4568
DOF2.1 -4875 -4862
DOF5.1 -5399 -1659
CDF5 -10204 -371
DOF5.6 -940 -141

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G26790 5243 1970 -10448
AT1G28310 -9443 -9092 -7322
CDF1 4832 3796 -8046
CDF2 6646 6116 -6307
CDF3 6221 1571 -10550
CDF4 10321 10495 10304
CDF5 8995 -371 -10204
DAG1 -1785 -10000 -7381
DOF1.2 -2122 5502 342
DOF1.5 8196 2632 9959
DOF1.6 -5411 -7042 -7716
DOF1.7 4625 145 -8123
DOF1.8 8811 2895 -4749
DOF2.1 4639 -4862 -4875
DOF2.2 1400 -9150 -9063
DOF2.4 6232 -7612 -7362
DOF2.5 -1972 -9244 -10592
DOF3.1 -1187 -7906 -3258
DOF3.2 10093 -3753 4863
DOF3.4 2720 3230 -1087
DOF4.1 4470 -4342 3326
DOF4.6 -197 -7821 -9119
DOF4.7 1570 1015 2636
DOF5.1 7346 -1659 -5399
DOF5.3 -917 -9212 -9389
DOF5.4 8654 3740 -8795
DOF5.6 2675 -141 -940
DOF5.7 -6234 -7802 -8612
MEE47 -5854 -6292 5661
OBP2 -3435 -4568 -5620
OBP3 4035 -6267 -8494



RNA_REGULATION_OF_TRANSCRIPTION_PWWP_DOMAIN_PROTEIN

RNA_REGULATION_OF_TRANSCRIPTION_PWWP_DOMAIN_PROTEIN
metric value
setSize 11
pMANOVA 0.00673
p.adjustMANOVA 0.0171
s.dist 0.534
s.S93 -0.177
s.S94 -0.0352
s.S80 -0.502
p.S93 0.31
p.S94 0.84
p.S80 0.00393




Top 20 genes
Gene S80 S93
HULK1 -9951 -7597
HUA2 -7369 -5526
AT2G48160 -4250 -7300
AT3G21295 -5793 -4736
AT5G27650 -6929 -3778
HULK3 -6148 -4191
AT3G27860 -1632 -5375

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT2G48160 -7300 3750 -4250
AT3G05430 2326 -5615 -3114
AT3G09670 2819 4230 -701
AT3G21295 -4736 -2796 -5793
AT3G27860 -5375 -2130 -1632
AT5G02950 8435 8321 -4633
AT5G27650 -3778 -189 -6929
AT5G40340 4918 -3471 -9860
HUA2 -5526 3595 -7369
HULK1 -7597 -6966 -9951
HULK3 -4191 1860 -6148



RNA_REGULATION_OF_TRANSCRIPTION_CHROMATIN_REMODELING_FACTORS

RNA_REGULATION_OF_TRANSCRIPTION_CHROMATIN_REMODELING_FACTORS
metric value
setSize 35
pMANOVA 1.01e-06
p.adjustMANOVA 1.11e-05
s.dist 0.533
s.S93 -0.367
s.S94 -0.0809
s.S80 -0.378
p.S93 0.000174
p.S94 0.408
p.S80 0.000107




Top 20 genes
Gene S80 S93
PIE1 -10515 -10035
SWI3C -9640 -6779
ATRX -10158 -6396
CHR10 -6223 -10327
CHR28 -8429 -6911
RAD5 -7613 -7496
AT1G11100 -7328 -7625
CHR11 -9495 -5864
CHR8 -5484 -8185
AT2G40770 -8010 -5369
MOM -10000 -4252
CHB3 -9392 -4065
AT3G54460 -6616 -5769
BRM -10138 -3398
CHR18 -3436 -8132
CHR23 -6499 -3724
SWI3B -2778 -8583
CHR24 -5485 -2560
RGD3 -2547 -5222
EDA16 -2674 -4517

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G05120 -58 1028 -5963
AT1G11100 -7625 -4333 -7328
AT1G49520 6618 -244 -8172
AT2G40770 -5369 -2731 -8010
AT3G54460 -5769 5737 -6616
AT5G05130 -470 4045 6996
AT5G07810 7311 5399 7676
ATRX -6396 -2825 -10158
BRM -3398 404 -10138
BSH -4456 -9086 2936
CHB3 -4065 2755 -9392
CHC1 -6117 8747 6587
CHR10 -10327 -5678 -6223
CHR11 -5864 2165 -9495
CHR12 3849 -2606 -8477
CHR18 -8132 -7520 -3436
CHR23 -3724 -8503 -6499
CHR24 -2560 442 -5485
CHR27 -1513 1873 -5296
CHR28 -6911 -6956 -8429
CHR8 -8185 480 -5484
CLSY2 -5229 -2898 8793
CLSY3 -817 -1066 -4385
CLSY4 1988 732 -2119
DDM1 1147 44 -1931
DRD1 -5038 4808 6103
EBS 1232 -999 -4743
EDA16 -4517 4253 -2674
MOM -4252 -3276 -10000
PIE1 -10035 -5915 -10515
RAD5 -7496 528 -7613
RGD3 -5222 9901 -2547
SWI3A -7357 -2665 -1403
SWI3B -8583 -1142 -2778
SWI3C -6779 14 -9640



MINOR_CHO_METABOLISM_CALLOSE

MINOR_CHO_METABOLISM_CALLOSE
metric value
setSize 13
pMANOVA 1.84e-05
p.adjustMANOVA 0.000116
s.dist 0.53
s.S93 -0.258
s.S94 0.251
s.S80 -0.389
p.S93 0.107
p.S94 0.117
p.S80 0.0152




Top 20 genes
Gene S80 S93
CALS4 -8170 -10161
CALS1 -6561 -10232
CALS6 -6824 -8738
CALS7 -9637 -4355
CALS2 -7075 -4994
CALS3 -3355 -3427
ATGSL10 -1585 -4426

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT3G14780 10015 1888 -8274
ATGSL10 -4426 7261 -1585
CALS1 -10232 -3332 -6561
CALS10 2142 9274 635
CALS11 -6002 7194 4312
CALS12 -1869 9771 4794
CALS2 -4994 3019 -7075
CALS3 -3427 6061 -3355
CALS4 -10161 -2879 -8170
CALS6 -8738 170 -6824
CALS7 -4355 -4043 -9637
CALS8 653 4279 -7935
PDCB1 6527 1637 -6011



TRANSPORT_NUCLEOTIDES

TRANSPORT_NUCLEOTIDES
metric value
setSize 19
pMANOVA 0.0317
p.adjustMANOVA 0.0584
s.dist 0.523
s.S93 -0.289
s.S94 -0.272
s.S80 -0.34
p.S93 0.0293
p.S94 0.0398
p.S80 0.0103




Top 20 genes
Gene S80 S93
PUP7 -7758 -10344
PUP1 -6416 -9390
PUP14 -4279 -10414
PUP18 -3358 -10251
PUP23 -2618 -9745
AT1G34470 -4784 -4014
AT3G23870 -1675 -5979
PUP4 -5201 -1493
PUP13 -6339 -943
ATPUP5 -3507 -1041
ATUPS3 -6516 -61

Click HERE to show all gene set members

All member genes
S93 S94 S80
AT1G34470 -4014 -3897 -4784
AT3G23870 -5979 -6789 -1675
ATPUP12 -2183 -617 1037
ATPUP5 -1041 -2908 -3507
ATUPS3 -61 -3409 -6516
NCS1 6247 6123 -7076
PUP1 -9390 -9703 -6416
PUP10 1503 -1473 -9122
PUP11 1101 7998 6352
PUP13 -943 -8080 -6339
PUP14 -10414 -6765 -4279
PUP17 -6615 3129 3895
PUP18 -10251 -3630 -3358
PUP2 1601 -1985 -4644
PUP21 1974 -2162 -10196
PUP23 -9745 -5002 -2618
PUP4 -1493 832 -5201
PUP7 -10344 -9234 -7758
PUP8 2906 677 695



Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.0.3 (2020-10-10)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.2 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] parallel  stats4    stats     graphics  grDevices utils     datasets 
## [8] methods   base     
## 
## other attached packages:
##  [1] pkgload_1.1.0               GGally_2.0.0               
##  [3] ggplot2_3.3.2               beeswarm_0.2.3             
##  [5] gtools_3.8.2                tibble_3.0.4               
##  [7] dplyr_1.0.2                 echarts4r_0.3.3            
##  [9] UpSetR_1.4.0                eulerr_6.1.0               
## [11] kableExtra_1.3.4            mitch_1.2.2                
## [13] DESeq2_1.30.0               SummarizedExperiment_1.20.0
## [15] Biobase_2.50.0              MatrixGenerics_1.2.0       
## [17] matrixStats_0.57.0          GenomicRanges_1.42.0       
## [19] GenomeInfoDb_1.26.0         IRanges_2.24.0             
## [21] S4Vectors_0.28.0            BiocGenerics_0.36.0        
## [23] gplots_3.1.0                reshape2_1.4.4             
## 
## loaded via a namespace (and not attached):
##  [1] bitops_1.0-6           bit64_4.0.5            webshot_0.5.2         
##  [4] RColorBrewer_1.1-2     httr_1.4.2             rprojroot_1.3-2       
##  [7] backports_1.2.0        tools_4.0.3            R6_2.5.0              
## [10] KernSmooth_2.23-18     DBI_1.1.0              colorspace_2.0-0      
## [13] withr_2.3.0            tidyselect_1.1.0       gridExtra_2.3         
## [16] bit_4.0.4              compiler_4.0.3         rvest_0.3.6           
## [19] xml2_1.3.2             desc_1.2.0             DelayedArray_0.16.0   
## [22] labeling_0.4.2         caTools_1.18.0         scales_1.1.1          
## [25] genefilter_1.72.0      systemfonts_1.0.1      stringr_1.4.0         
## [28] digest_0.6.27          rmarkdown_2.5          svglite_2.0.0         
## [31] XVector_0.30.0         pkgconfig_2.0.3        htmltools_0.5.0       
## [34] highr_0.8              fastmap_1.0.1          htmlwidgets_1.5.2     
## [37] rlang_0.4.8            rstudioapi_0.12        RSQLite_2.2.1         
## [40] shiny_1.5.0            farver_2.0.3           generics_0.1.0        
## [43] jsonlite_1.7.1         BiocParallel_1.24.1    RCurl_1.98-1.2        
## [46] magrittr_1.5           GenomeInfoDbData_1.2.4 Matrix_1.2-18         
## [49] Rcpp_1.0.5             munsell_0.5.0          lifecycle_0.2.0       
## [52] yaml_2.2.1             stringi_1.5.3          MASS_7.3-53           
## [55] zlibbioc_1.36.0        plyr_1.8.6             grid_4.0.3            
## [58] blob_1.2.1             promises_1.1.1         crayon_1.3.4          
## [61] lattice_0.20-41        splines_4.0.3          annotate_1.68.0       
## [64] polylabelr_0.2.0       locfit_1.5-9.4         knitr_1.30            
## [67] pillar_1.4.6           geneplotter_1.68.0     XML_3.99-0.5          
## [70] glue_1.4.2             evaluate_0.14          vctrs_0.3.4           
## [73] httpuv_1.5.4           testthat_3.0.0         polyclip_1.10-0       
## [76] gtable_0.3.0           purrr_0.3.4            assertthat_0.2.1      
## [79] reshape_0.8.8          xfun_0.19              mime_0.9              
## [82] xtable_1.8-4           later_1.1.0.1          survival_3.2-7        
## [85] viridisLite_0.3.0      AnnotationDbi_1.52.0   memoise_1.1.0         
## [88] ellipsis_0.3.1

END of report