date generated: 2021-03-25

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                       x
## 1MMP         -0.2573510
## 2-Cys         2.8083698
## 2A6           2.9365255
## 2MMP        -10.4988977
## 3AT1          1.3787620
## 3BETAHSD/D1   0.3206492
Here are some metrics about the input data profile:
Profile metrics
Profile metrics
num_genesets 959
num_genes_in_profile 21307
duplicated_genes_present 0
num_profile_genes_in_sets 20233
num_profile_genes_not_in_sets 1074

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: ../baseline/ref/Ath_AGI_LOCUS_TAIR10_Aug2012.txt.gmt
Gene sets metrics
Gene sets metrics
num_genesets 959
num_genesets_excluded 693
num_genesets_included 266

Differential pathway expression


Interactive enrichment scatterplot

Significance is calculated by -log10(p-value). All points shown are FDR<0.05.

Significance is calculated by -log10(p-value). Top N sets shown irrespective of FDR.

Results table

Top N= 50 gene sets
set setSize pANOVA s.dist p.adjustANOVA
PS CALVIN CYCLE RUBISCO INTERACTING 6 5.82e-04 0.811 1.08e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XIII 7 2.34e-04 0.803 5.49e-03
AMINO ACID METABOLISM SYNTHESIS BRANCHED CHAIN GROUP COMMON BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 1.55e-03 0.746 2.38e-02
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN TRYPTOPHAN SYNTHASE 6 5.36e-03 0.656 5.43e-02
SIGNALLING RECEPTOR KINASES EXTENSIN 5 1.59e-02 0.623 1.13e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES ADENYLATE KINASE 7 4.63e-03 0.618 4.91e-02
PS LIGHTREACTION PHOTOSYSTEM I LHC-I 8 3.00e-03 0.606 4.06e-02
TRANSPORT SULPHATE 12 2.92e-04 -0.604 6.20e-03
OPP OXIDATIVE PP 6-PHOSPHOGLUCONATE DEHYDROGENASE 7 6.25e-03 0.597 6.19e-02
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS 18 1.19e-05 0.596 4.41e-04
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 8 3.52e-03 0.596 4.62e-02
RNA REGULATION OF TRANSCRIPTION SIGMA LIKE PLANT 6 1.17e-02 0.595 9.44e-02
MAJOR CHO METABOLISM DEGRADATION SUCROSE FRUCTOKINASE 7 7.29e-03 0.586 6.77e-02
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS 44 3.37e-11 0.577 1.50e-08
PS LIGHTREACTION PHOTOSYSTEM II LHC-II 14 2.22e-04 0.570 5.49e-03
TCA / ORG TRANSFORMATION TCA SUCCINATE DEHYDROGENASE 5 2.73e-02 0.570 1.47e-01
SECONDARY METABOLISM FLAVONOIDS ISOFLAVONES ISOFLAVONE REDUCTASE 7 1.07e-02 -0.557 8.83e-02
PS LIGHTREACTION CYTOCHROME B6/F 6 2.10e-02 0.544 1.25e-01
CELL WALL CELLULOSE SYNTHESIS 14 4.40e-04 0.542 8.93e-03
LIPID METABOLISM FA DESATURATION DESATURASE 7 1.37e-02 0.538 1.04e-01
BIODEGRADATION OF XENOBIOTICS HYDROXYACYLGLUTATHIONE HYDROLASE 5 4.51e-02 -0.517 2.01e-01
N-METABOLISM AMMONIA METABOLISM GLUTAMINE SYNTHETASE 6 2.90e-02 0.515 1.49e-01
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE 10 6.43e-03 0.498 6.20e-02
RNA REGULATION OF TRANSCRIPTION SNF7 12 2.93e-03 -0.496 4.06e-02
MISC RHODANESE 7 2.33e-02 0.495 1.32e-01
MAJOR CHO METABOLISM SYNTHESIS STARCH AGPASE 8 1.69e-02 0.488 1.16e-01
CELL WALL PRECURSOR SYNTHESIS GAE 6 3.92e-02 0.486 1.82e-01
TRANSPORT AMMONIUM 6 3.98e-02 0.485 1.83e-01
RNA REGULATION OF TRANSCRIPTION FHA TRANSCRIPTION FACTOR 7 2.78e-02 -0.480 1.47e-01
HORMONE METABOLISM BRASSINOSTEROID SYNTHESIS-DEGRADATION STEROLS OTHER 8 1.88e-02 0.480 1.21e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT V 8 2.40e-02 0.461 1.32e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE X 8 2.59e-02 0.455 1.41e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VII 9 1.82e-02 0.455 1.21e-01
PS LIGHTREACTION NADH DH 12 6.53e-03 0.453 6.20e-02
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP 13 5.23e-03 -0.447 5.43e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS 4CL 8 2.87e-02 0.447 1.49e-01
RNA REGULATION OF TRANSCRIPTION GLOBAL TRANSCRIPTION FACTOR GROUP 14 4.09e-03 -0.443 4.78e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 38 2.82e-06 0.439 1.80e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 34 1.16e-05 0.435 4.41e-04
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI 10 1.77e-02 0.433 1.20e-01
STRESS BIOTIC REGULATION OF TRANSCRIPTION 6 7.02e-02 -0.427 2.69e-01
PS LIGHTREACTION OTHER ELECTRON CARRIER (OX/RED) FERREDOXIN 6 7.16e-02 0.425 2.71e-01
CELL WALL PRECURSOR SYNTHESIS UGE 5 1.02e-01 -0.422 3.23e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN ANTHRANILATE SYNTHASE 5 1.04e-01 0.420 3.23e-01
SIGNALLING RECEPTOR KINASES LEGUME-LECTIN 10 2.40e-02 -0.412 1.32e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL COA REDUCTASE 6 8.41e-02 -0.407 2.95e-01
AMINO ACID METABOLISM SYNTHESIS CENTRAL AMINO ACID METABOLISM ASPARTATE ASPARTATE AMINOTRANSFERASE 6 8.93e-02 0.401 3.06e-01
PROTEIN FOLDING 64 4.30e-08 0.396 6.40e-06
CELL DIVISION PLASTID 8 5.29e-02 0.395 2.28e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES ENDOGLUCANASE 12 1.87e-02 0.392 1.21e-01


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pANOVA s.dist p.adjustANOVA
PS CALVIN CYCLE RUBISCO INTERACTING 6 5.82e-04 0.81100 1.08e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XIII 7 2.34e-04 0.80300 5.49e-03
AMINO ACID METABOLISM SYNTHESIS BRANCHED CHAIN GROUP COMMON BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 1.55e-03 0.74600 2.38e-02
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN TRYPTOPHAN SYNTHASE 6 5.36e-03 0.65600 5.43e-02
SIGNALLING RECEPTOR KINASES EXTENSIN 5 1.59e-02 0.62300 1.13e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES ADENYLATE KINASE 7 4.63e-03 0.61800 4.91e-02
PS LIGHTREACTION PHOTOSYSTEM I LHC-I 8 3.00e-03 0.60600 4.06e-02
TRANSPORT SULPHATE 12 2.92e-04 -0.60400 6.20e-03
OPP OXIDATIVE PP 6-PHOSPHOGLUCONATE DEHYDROGENASE 7 6.25e-03 0.59700 6.19e-02
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS 18 1.19e-05 0.59600 4.41e-04
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 8 3.52e-03 0.59600 4.62e-02
RNA REGULATION OF TRANSCRIPTION SIGMA LIKE PLANT 6 1.17e-02 0.59500 9.44e-02
MAJOR CHO METABOLISM DEGRADATION SUCROSE FRUCTOKINASE 7 7.29e-03 0.58600 6.77e-02
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS 44 3.37e-11 0.57700 1.50e-08
PS LIGHTREACTION PHOTOSYSTEM II LHC-II 14 2.22e-04 0.57000 5.49e-03
TCA / ORG TRANSFORMATION TCA SUCCINATE DEHYDROGENASE 5 2.73e-02 0.57000 1.47e-01
SECONDARY METABOLISM FLAVONOIDS ISOFLAVONES ISOFLAVONE REDUCTASE 7 1.07e-02 -0.55700 8.83e-02
PS LIGHTREACTION CYTOCHROME B6/F 6 2.10e-02 0.54400 1.25e-01
CELL WALL CELLULOSE SYNTHESIS 14 4.40e-04 0.54200 8.93e-03
LIPID METABOLISM FA DESATURATION DESATURASE 7 1.37e-02 0.53800 1.04e-01
BIODEGRADATION OF XENOBIOTICS HYDROXYACYLGLUTATHIONE HYDROLASE 5 4.51e-02 -0.51700 2.01e-01
N-METABOLISM AMMONIA METABOLISM GLUTAMINE SYNTHETASE 6 2.90e-02 0.51500 1.49e-01
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE 10 6.43e-03 0.49800 6.20e-02
RNA REGULATION OF TRANSCRIPTION SNF7 12 2.93e-03 -0.49600 4.06e-02
MISC RHODANESE 7 2.33e-02 0.49500 1.32e-01
MAJOR CHO METABOLISM SYNTHESIS STARCH AGPASE 8 1.69e-02 0.48800 1.16e-01
CELL WALL PRECURSOR SYNTHESIS GAE 6 3.92e-02 0.48600 1.82e-01
TRANSPORT AMMONIUM 6 3.98e-02 0.48500 1.83e-01
RNA REGULATION OF TRANSCRIPTION FHA TRANSCRIPTION FACTOR 7 2.78e-02 -0.48000 1.47e-01
HORMONE METABOLISM BRASSINOSTEROID SYNTHESIS-DEGRADATION STEROLS OTHER 8 1.88e-02 0.48000 1.21e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT V 8 2.40e-02 0.46100 1.32e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE X 8 2.59e-02 0.45500 1.41e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VII 9 1.82e-02 0.45500 1.21e-01
PS LIGHTREACTION NADH DH 12 6.53e-03 0.45300 6.20e-02
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP 13 5.23e-03 -0.44700 5.43e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS 4CL 8 2.87e-02 0.44700 1.49e-01
RNA REGULATION OF TRANSCRIPTION GLOBAL TRANSCRIPTION FACTOR GROUP 14 4.09e-03 -0.44300 4.78e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 38 2.82e-06 0.43900 1.80e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 34 1.16e-05 0.43500 4.41e-04
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI 10 1.77e-02 0.43300 1.20e-01
STRESS BIOTIC REGULATION OF TRANSCRIPTION 6 7.02e-02 -0.42700 2.69e-01
PS LIGHTREACTION OTHER ELECTRON CARRIER (OX/RED) FERREDOXIN 6 7.16e-02 0.42500 2.71e-01
CELL WALL PRECURSOR SYNTHESIS UGE 5 1.02e-01 -0.42200 3.23e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN ANTHRANILATE SYNTHASE 5 1.04e-01 0.42000 3.23e-01
SIGNALLING RECEPTOR KINASES LEGUME-LECTIN 10 2.40e-02 -0.41200 1.32e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL COA REDUCTASE 6 8.41e-02 -0.40700 2.95e-01
AMINO ACID METABOLISM SYNTHESIS CENTRAL AMINO ACID METABOLISM ASPARTATE ASPARTATE AMINOTRANSFERASE 6 8.93e-02 0.40100 3.06e-01
PROTEIN FOLDING 64 4.30e-08 0.39600 6.40e-06
CELL DIVISION PLASTID 8 5.29e-02 0.39500 2.28e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES ENDOGLUCANASE 12 1.87e-02 0.39200 1.21e-01
SIGNALLING LIPIDS 5 1.31e-01 -0.39000 3.85e-01
AMINO ACID METABOLISM DEGRADATION BRANCHED CHAIN GROUP SHARED 7 7.79e-02 -0.38500 2.85e-01
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS MALIC 6 1.03e-01 0.38400 3.23e-01
REDOX DISMUTASES AND CATALASES 11 2.89e-02 0.38100 1.49e-01
CELL WALL CELL WALL PROTEINS AGPS AGP 39 4.38e-05 0.37800 1.50e-03
HORMONE METABOLISM CYTOKININ SIGNAL TRANSDUCTION 7 8.36e-02 0.37800 2.95e-01
MAJOR CHO METABOLISM SYNTHESIS STARCH STARCH SYNTHASE 6 1.10e-01 0.37700 3.38e-01
SECONDARY METABOLISM ISOPRENOIDS 5 1.49e-01 -0.37300 4.12e-01
RNA REGULATION OF TRANSCRIPTION WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY 65 2.00e-07 -0.37300 2.23e-05
RNA REGULATION OF TRANSCRIPTION JUMONJI FAMILY 13 2.23e-02 -0.36600 1.29e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS MISC 9 5.79e-02 -0.36500 2.37e-01
NOT ASSIGNED NO ONTOLOGY ABC1 FAMILY PROTEIN 11 3.70e-02 0.36300 1.75e-01
PROTEIN DEGRADATION UBIQUITIN E1 7 9.77e-02 -0.36200 3.20e-01
HORMONE METABOLISM ETHYLENE SIGNAL TRANSDUCTION 29 7.57e-04 -0.36100 1.30e-02
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE V 8 7.85e-02 0.35900 2.85e-01
PROTEIN DEGRADATION SUBTILASES 31 5.60e-04 0.35800 1.08e-02
PROTEIN DEGRADATION UBIQUITIN E2 38 1.61e-04 -0.35400 4.48e-03
TRANSPORT P- AND V-ATPASES H+-TRANSPORTING TWO-SECTOR ATPASE 7 1.05e-01 0.35400 3.25e-01
PROTEIN DEGRADATION UBIQUITIN E3 BTB/POZ CULLIN3 BTB/POZ 10 5.46e-02 -0.35100 2.31e-01
PROTEIN DEGRADATION METALLOPROTEASE 38 1.86e-04 0.35000 4.88e-03
PROTEIN ASSEMBLY AND COFACTOR LIGATION 23 3.84e-03 0.34800 4.78e-02
DEVELOPMENT LATE EMBRYOGENESIS ABUNDANT 18 1.21e-02 -0.34100 9.47e-02
RNA REGULATION OF TRANSCRIPTION HSF,HEAT-SHOCK TRANSCRIPTION FACTOR FAMILY 18 1.23e-02 -0.34100 9.47e-02
MISC OTHER FERREDOXINS AND RIESKE DOMAIN 6 1.53e-01 0.33700 4.18e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN PROKARYOTIC CHLOROPLAST 50S SUBUNIT L12 6 1.54e-01 0.33600 4.18e-01
MISC ACYL TRANSFERASES 8 1.02e-01 0.33400 3.23e-01
RNA PROCESSING SPLICING 59 9.20e-06 -0.33400 4.10e-04
C1-METABOLISM 10 6.85e-02 0.33300 2.68e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE H1 7 1.33e-01 -0.32800 3.86e-01
PROTEIN TARGETING CHLOROPLAST 36 6.78e-04 0.32700 1.21e-02
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES NUCLEOSIDE DIPHOSPHATE KINASE 5 2.06e-01 0.32600 4.94e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS EXPORT FROM NUCLEUS 7 1.36e-01 -0.32500 3.91e-01
NUCLEOTIDE METABOLISM SYNTHESIS PRS-PP 5 2.10e-01 0.32400 4.97e-01
MISC ALCOHOL DEHYDROGENASES CINNAMYL ALCOHOL DEHYDROGENASE 6 1.71e-01 0.32200 4.43e-01
RNA REGULATION OF TRANSCRIPTION ATSR TRANSCRIPTION FACTOR FAMILY 6 1.72e-01 -0.32200 4.43e-01
STRESS BIOTIC PR-PROTEINS PROTEINASE INHIBITORS TRYPSIN INHIBITOR 8 1.17e-01 0.32000 3.51e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACP PROTEIN 7 1.42e-01 0.32000 4.00e-01
HORMONE METABOLISM ABSCISIC ACID INDUCED-REGULATED-RESPONSIVE-ACTIVATED 23 8.30e-03 -0.31800 7.45e-02
RNA REGULATION OF TRANSCRIPTION PHOR1 11 6.85e-02 -0.31700 2.68e-01
STRESS BIOTIC SIGNALLING MLO-LIKE 11 7.06e-02 -0.31500 2.69e-01
RNA REGULATION OF TRANSCRIPTION ZF-HD 14 4.22e-02 0.31400 1.90e-01
FERMENTATION ALDEHYDE DEHYDROGENASE 7 1.55e-01 0.31100 4.18e-01
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY 31 2.80e-03 0.31000 4.06e-02
RNA REGULATION OF TRANSCRIPTION TCP TRANSCRIPTION FACTOR FAMILY 18 2.32e-02 0.30900 1.32e-01
REDOX ASCORBATE AND GLUTATHIONE GLUTATHIONE 12 6.57e-02 0.30700 2.64e-01
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE 16 3.45e-02 0.30500 1.69e-01
CELL WALL CELLULOSE SYNTHESIS CELLULOSE SYNTHASE 23 1.19e-02 0.30300 9.44e-02
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT UNKNOWN 5 2.43e-01 0.30100 5.26e-01
CELL CELL DEATH PLANTS 6 2.02e-01 -0.30100 4.86e-01
HORMONE METABOLISM ABSCISIC ACID SIGNAL TRANSDUCTION 10 1.01e-01 -0.30000 3.23e-01
NOT ASSIGNED NO ONTOLOGY LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN 8 1.43e-01 -0.29900 4.00e-01
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION 31 4.30e-03 -0.29600 4.79e-02
MINOR CHO METABOLISM CALLOSE 14 5.49e-02 0.29600 2.31e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 21 1.90e-02 0.29600 1.21e-01
REDOX ASCORBATE AND GLUTATHIONE ASCORBATE 16 4.68e-02 0.28700 2.07e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE 25 1.51e-02 0.28100 1.11e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH COMPLEX I 6 2.36e-01 0.27900 5.23e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES 16 5.32e-02 0.27900 2.28e-01
MINOR CHO METABOLISM TREHALOSE TPP 9 1.47e-01 -0.27900 4.10e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP2 10 1.31e-01 0.27600 3.85e-01
STRESS ABIOTIC LIGHT 6 2.45e-01 -0.27400 5.27e-01
NOT ASSIGNED NO ONTOLOGY BTB/POZ DOMAIN-CONTAINING PROTEIN 5 2.89e-01 -0.27400 5.77e-01
TRANSPORT UNSPECIFIED ANIONS 14 7.71e-02 0.27300 2.84e-01
TRANSPORT SUGARS SUCROSE 7 2.13e-01 0.27200 5.00e-01
RNA REGULATION OF TRANSCRIPTION ALFIN-LIKE 7 2.15e-01 -0.27100 5.00e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN UNKNOWN UNKNOWN 5 2.98e-01 0.26900 5.82e-01
PROTEIN TARGETING SECRETORY PATHWAY ER 14 8.28e-02 -0.26800 2.95e-01
AMINO ACID METABOLISM MISC 5 3.00e-01 0.26800 5.82e-01
N-METABOLISM MISC 6 2.59e-01 -0.26600 5.45e-01
MAJOR CHO METABOLISM DEGRADATION STARCH STARCH CLEAVAGE BETA AMYLASE 9 1.68e-01 0.26500 4.43e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS PHOSPHATIDATE CYTIDYLYLTRANSFERASE 6 2.68e-01 0.26100 5.56e-01
HORMONE METABOLISM AUXIN SIGNAL TRANSDUCTION 23 3.06e-02 0.26000 1.55e-01
TRANSPORT CALCIUM 21 4.02e-02 -0.25900 1.83e-01
CO-FACTOR AND VITAMINE METABOLISM IRON-SULPHUR CLUSTERS 7 2.36e-01 0.25800 5.23e-01
AMINO ACID METABOLISM DEGRADATION SERINE-GLYCINE-CYSTEINE GROUP GLYCINE 5 3.18e-01 0.25800 6.03e-01
SECONDARY METABOLISM SULFUR-CONTAINING GLUCOSINOLATES DEGRADATION MYROSINASE 6 2.76e-01 0.25700 5.68e-01
SIGNALLING PHOSPHINOSITIDES PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 18 6.01e-02 0.25600 2.44e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE HEXOKINASE 5 3.26e-01 0.25400 6.11e-01
STRESS ABIOTIC COLD 17 7.02e-02 -0.25400 2.69e-01
RNA REGULATION OF TRANSCRIPTION CHROMATIN REMODELING FACTORS 35 9.61e-03 -0.25300 8.24e-02
SECONDARY METABOLISM WAX 13 1.16e-01 0.25200 3.51e-01
HORMONE METABOLISM CYTOKININ SYNTHESIS-DEGRADATION 16 8.52e-02 0.24900 2.97e-01
SIGNALLING PHOSPHINOSITIDES PHOSPHOINOSITIDE PHOSPHOLIPASE C 9 1.98e-01 0.24800 4.83e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5 3.39e-01 0.24700 6.18e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS WD-REPEAT PROTEINS 6 2.97e-01 0.24600 5.82e-01
CELL WALL DEGRADATION MANNAN-XYLOSE-ARABINOSE-FUCOSE 16 9.13e-02 0.24400 3.08e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H3 6 3.03e-01 -0.24300 5.82e-01
CELL WALL DEGRADATION CELLULASES AND BETA -1,4-GLUCANASES 9 2.07e-01 0.24300 4.94e-01
CO-FACTOR AND VITAMINE METABOLISM MOLYBDENUM COFACTOR 5 3.50e-01 0.24100 6.25e-01
PROTEIN TARGETING UNKNOWN 8 2.40e-01 0.24000 5.23e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES CARBOXYLESTERASE 8 2.40e-01 -0.24000 5.23e-01
STRESS BIOTIC RESPIRATORY BURST 8 2.48e-01 -0.23600 5.29e-01
MISC MISC2 28 3.14e-02 0.23500 1.58e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES 7 2.82e-01 0.23500 5.71e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES MISC 11 1.78e-01 0.23500 4.50e-01
RNA REGULATION OF TRANSCRIPTION NIN-LIKE BZIP-RELATED FAMILY 7 2.84e-01 0.23400 5.71e-01
RNA REGULATION OF TRANSCRIPTION ORPHAN FAMILY 9 2.26e-01 0.23300 5.17e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C 12 1.63e-01 0.23300 4.36e-01
REDOX THIOREDOXIN 51 4.11e-03 0.23200 4.78e-02
CELL WALL CELL WALL PROTEINS HRGP 13 1.55e-01 -0.22800 4.18e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2 14 1.42e-01 0.22600 4.00e-01
MISC BETA 1,3 GLUCAN HYDROLASES 19 8.80e-02 -0.22600 3.04e-01
PROTEIN SYNTHESIS RELEASE 10 2.17e-01 -0.22500 5.02e-01
TRANSPORT MAJOR INTRINSIC PROTEINS TIP 7 3.02e-01 -0.22500 5.82e-01
SECONDARY METABOLISM FLAVONOIDS DIHYDROFLAVONOLS 15 1.32e-01 0.22400 3.86e-01
RNA REGULATION OF TRANSCRIPTION GRAS TRANSCRIPTION FACTOR FAMILY 9 2.48e-01 -0.22200 5.29e-01
RNA REGULATION OF TRANSCRIPTION BROMODOMAIN PROTEINS 8 2.77e-01 -0.22200 5.68e-01
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 12 1.85e-01 0.22100 4.66e-01
RNA REGULATION OF TRANSCRIPTION PSUDO ARR TRANSCRIPTION FACTOR FAMILY 7 3.13e-01 -0.22000 5.97e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L7A 5 3.95e-01 0.22000 6.56e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VIII 8 2.83e-01 -0.21900 5.71e-01
MISC O-METHYL TRANSFERASES 19 1.03e-01 0.21600 3.23e-01
RNA REGULATION OF TRANSCRIPTION C3H ZINC FINGER FAMILY 26 5.69e-02 -0.21600 2.35e-01
MINOR CHO METABOLISM TREHALOSE POTENTIAL TPS/TPP 7 3.29e-01 -0.21300 6.13e-01
GLYCOLYSIS CYTOSOLIC BRANCH PHOSPHOGLYCERATE MUTASE 8 3.02e-01 -0.21100 5.82e-01
PROTEIN SYNTHESIS INITIATION 78 1.38e-03 -0.21000 2.19e-02
STRESS BIOTIC PR-PROTEINS 160 5.40e-06 -0.20800 2.68e-04
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT II 13 1.96e-01 0.20700 4.79e-01
AMINO ACID METABOLISM DEGRADATION GLUTAMATE FAMILY ARGININE 7 3.46e-01 0.20600 6.24e-01
NUCLEOTIDE METABOLISM SALVAGE PHOSPHORIBOSYLTRANSFERASES UPP 5 4.26e-01 0.20600 6.71e-01
RNA REGULATION OF TRANSCRIPTION HISTONE ACETYLTRANSFERASES 18 1.31e-01 -0.20500 3.85e-01
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY 118 1.50e-04 -0.20200 4.45e-03
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACP DESATURASE 7 3.56e-01 0.20200 6.27e-01
MISC PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN 58 8.67e-03 0.19900 7.58e-02
CELL WALL CELLULOSE SYNTHESIS COBRA 7 3.62e-01 0.19900 6.32e-01
SECONDARY METABOLISM PHENYLPROPANOIDS 36 3.91e-02 0.19900 1.82e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2B 8 3.32e-01 -0.19800 6.16e-01
RNA REGULATION OF TRANSCRIPTION MADS BOX TRANSCRIPTION FACTOR FAMILY 32 5.24e-02 -0.19800 2.28e-01
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS 7 3.69e-01 -0.19600 6.38e-01
SECONDARY METABOLISM ISOPRENOIDS NON-MEVALONATE PATHWAY GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 4.51e-01 0.19500 6.86e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII 41 3.39e-02 -0.19100 1.68e-01
CELL WALL CELL WALL PROTEINS LRR 17 1.72e-01 0.19100 4.43e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS BRIX 6 4.18e-01 -0.19100 6.62e-01
SIGNALLING MISC 16 1.90e-01 0.18900 4.74e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE 26 9.55e-02 0.18900 3.18e-01
MISC GDSL-MOTIF LIPASE 55 1.62e-02 0.18700 1.13e-01
RNA TRANSCRIPTION 84 3.00e-03 -0.18700 4.06e-02
AMINO ACID METABOLISM SYNTHESIS ASPARTATE FAMILY METHIONINE HOMOCYSTEINE S-METHYLTRANSFERASE 8 3.59e-01 0.18700 6.30e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XII 9 3.34e-01 -0.18600 6.16e-01
PROTEIN DEGRADATION CYSTEINE PROTEASE 52 2.06e-02 -0.18600 1.25e-01
REDOX MISC 6 4.35e-01 0.18400 6.80e-01
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 417 1.16e-10 0.18400 2.58e-08
TRANSPORT AMINO ACIDS 52 2.18e-02 0.18400 1.28e-01
SIGNALLING MAP KINASES 44 3.56e-02 -0.18300 1.71e-01
RNA REGULATION OF TRANSCRIPTION BZIP TRANSCRIPTION FACTOR FAMILY 60 1.44e-02 -0.18300 1.07e-01
MICRO RNA, NATURAL ANTISENSE ETC 217 4.09e-06 -0.18100 2.28e-04
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H4 8 3.75e-01 0.18100 6.45e-01
REDOX HEME 5 4.85e-01 0.18000 7.17e-01
CELL WALL HEMICELLULOSE SYNTHESIS GLUCURONOXYLAN 9 3.52e-01 0.17900 6.25e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX 270 7.21e-07 -0.17500 6.43e-05
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION BZR 6 4.58e-01 -0.17500 6.92e-01
PROTEIN DEGRADATION AAA TYPE 35 7.37e-02 -0.17500 2.76e-01
SECONDARY METABOLISM FLAVONOIDS CHALCONES 8 3.96e-01 0.17300 6.56e-01
HORMONE METABOLISM JASMONATE SYNTHESIS-DEGRADATION LIPOXYGENASE 6 4.68e-01 0.17100 7.03e-01
PROTEIN TARGETING PEROXISOMES 10 3.55e-01 -0.16900 6.27e-01
PROTEIN TARGETING SECRETORY PATHWAY GOLGI 17 2.28e-01 -0.16900 5.19e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES 9 3.81e-01 0.16900 6.51e-01
STRESS ABIOTIC TOUCH/WOUNDING 12 3.13e-01 -0.16800 5.97e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES ALPHA-GALACTOSIDASE 5 5.16e-01 0.16800 7.48e-01
RNA REGULATION OF TRANSCRIPTION C2H2 ZINC FINGER FAMILY 99 4.18e-03 -0.16700 4.78e-02
HORMONE METABOLISM ETHYLENE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 23 1.71e-01 -0.16500 4.43e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-1 7 4.50e-01 0.16500 6.86e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ENOYL COA HYDRATASE 9 3.97e-01 0.16300 6.56e-01
SECONDARY METABOLISM ISOPRENOIDS TERPENOIDS 23 1.77e-01 0.16300 4.50e-01
TRANSPORT NUCLEOTIDES 18 2.39e-01 -0.16000 5.23e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL COA DH 6 4.98e-01 0.16000 7.26e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 17 2.54e-01 0.16000 5.40e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES PHOSPHOLIPASE D 12 3.39e-01 -0.15900 6.18e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI 13 3.21e-01 0.15900 6.06e-01
TRANSPORT NITRATE 10 3.88e-01 0.15800 6.56e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES 60 3.50e-02 0.15700 1.69e-01
RNA REGULATION OF TRANSCRIPTION AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY 90 9.87e-03 -0.15700 8.31e-02
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) DOF ZINC FINGER FAMILY 31 1.42e-01 0.15200 4.00e-01
CELL WALL PRECURSOR SYNTHESIS UXS 6 5.20e-01 -0.15200 7.51e-01
RNA REGULATION OF TRANSCRIPTION AS2,LATERAL ORGAN BOUNDARIES GENE FAMILY 21 2.30e-01 -0.15100 5.21e-01
RNA REGULATION OF TRANSCRIPTION NAC DOMAIN TRANSCRIPTION FACTOR FAMILY 17 2.84e-01 -0.15000 5.71e-01
NOT ASSIGNED NO ONTOLOGY EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN 16 3.01e-01 -0.14900 5.82e-01
TRANSPORT PHOSPHATE 23 2.15e-01 -0.14900 5.00e-01
RNA REGULATION OF TRANSCRIPTION 14 3.38e-01 -0.14800 6.18e-01
METAL HANDLING BINDING, CHELATION AND STORAGE 44 8.99e-02 -0.14800 3.06e-01
MISC OXYGENASES 5 5.69e-01 -0.14700 7.90e-01
RNA PROCESSING RIBONUCLEASES 49 7.55e-02 -0.14700 2.80e-01
LIPID METABOLISM TAG SYNTHESIS 5 5.70e-01 0.14700 7.90e-01
SIGNALLING RECEPTOR KINASES WHEAT LRK10 LIKE 12 3.85e-01 -0.14500 6.54e-01
STRESS BIOTIC 135 3.86e-03 -0.14400 4.78e-02
NOT ASSIGNED NO ONTOLOGY PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN 6 5.43e-01 -0.14300 7.72e-01
DNA UNSPECIFIED 89 1.99e-02 -0.14300 1.25e-01
MISC GCN5-RELATED N-ACETYLTRANSFERASE 25 2.20e-01 0.14200 5.06e-01
HORMONE METABOLISM AUXIN SYNTHESIS-DEGRADATION 14 3.63e-01 0.14100 6.32e-01
REDOX THIOREDOXIN PDIL 13 3.86e-01 -0.13900 6.54e-01
PROTEIN GLYCOSYLATION 27 2.13e-01 -0.13800 5.00e-01
TRANSPORT PEPTIDES AND OLIGOPEPTIDES 48 9.76e-02 0.13800 3.20e-01
STRESS BIOTIC SIGNALLING 12 4.09e-01 -0.13800 6.62e-01
PROTEIN DEGRADATION AUTOPHAGY 22 2.65e-01 -0.13700 5.54e-01
HORMONE METABOLISM JASMONATE SYNTHESIS-DEGRADATION 12-OXO-PDA-REDUCTASE 5 5.95e-01 -0.13700 8.02e-01
PROTEIN TARGETING SECRETORY PATHWAY VACUOLE 30 1.94e-01 -0.13700 4.79e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION BETA KETOACYL COA SYNTHASE 11 4.39e-01 -0.13500 6.80e-01
NUCLEOTIDE METABOLISM SALVAGE PHOSPHORIBOSYLTRANSFERASES APRT 5 6.07e-01 0.13300 8.06e-01
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 38 1.58e-01 -0.13300 4.23e-01
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 35 1.76e-01 0.13200 4.50e-01
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES 156 4.62e-03 0.13100 4.91e-02
SIGNALLING RECEPTOR KINASES MISC 59 8.12e-02 -0.13100 2.92e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA PHENYLALANINE AROGENATE DEHYDRATASE / PREPHENATE DEHYDRATASE 6 5.78e-01 0.13100 7.94e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION LONG CHAIN FATTY ACID COA LIGASE 8 5.26e-01 0.12900 7.57e-01
DNA REPAIR 74 5.61e-02 -0.12800 2.34e-01
NUCLEOTIDE METABOLISM SALVAGE NUDIX HYDROLASES 24 2.76e-01 -0.12800 5.68e-01
METAL HANDLING 10 4.82e-01 -0.12800 7.17e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES BETA-GALACTOSIDASE 14 4.11e-01 0.12700 6.62e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I 15 3.99e-01 -0.12600 6.57e-01
TRANSPORT MAJOR INTRINSIC PROTEINS PIP 13 4.33e-01 0.12600 6.80e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2A 14 4.18e-01 0.12500 6.62e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 5.72e-01 -0.12300 7.90e-01
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 60 1.01e-01 0.12200 3.23e-01
PROTEIN SYNTHESIS ELONGATION 29 2.57e-01 0.12200 5.43e-01
MISC PLASTOCYANIN-LIKE 22 3.26e-01 0.12100 6.11e-01
SECONDARY METABOLISM SIMPLE PHENOLS 16 4.02e-01 0.12100 6.57e-01
SECONDARY METABOLISM N MISC ALKALOID-LIKE 20 3.49e-01 0.12100 6.25e-01
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 14 4.37e-01 -0.12000 6.80e-01
MISC CALCINEURIN-LIKE PHOSPHOESTERASE FAMILY PROTEIN 7 5.85e-01 0.11900 7.97e-01
LIPID METABOLISM EXOTICS(STEROIDS, SQUALENE ETC) 14 4.41e-01 0.11900 6.80e-01
TRANSPORT MAJOR INTRINSIC PROTEINS NIP 6 6.17e-01 0.11800 8.14e-01
MISC OXIDASES - COPPER, FLAVONE ETC 82 6.78e-02 0.11700 2.68e-01
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS CYT MDH 5 6.55e-01 0.11600 8.37e-01
PS PHOTORESPIRATION GLYCOLATE OXYDASE 5 6.55e-01 0.11600 8.37e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XI 27 3.03e-01 -0.11500 5.82e-01
PROTEIN TARGETING NUCLEUS 44 1.92e-01 -0.11400 4.76e-01
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION OTHER 5 6.65e-01 -0.11200 8.42e-01
PROTEIN DEGRADATION UBIQUITIN E3 RING 363 2.72e-04 -0.11100 6.06e-03
MINOR CHO METABOLISM OTHERS 38 2.38e-01 0.11100 5.23e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 40S SUBUNIT S17 6 6.41e-01 -0.11000 8.31e-01
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY 15 4.61e-01 0.11000 6.95e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN 26 3.33e-01 -0.11000 6.16e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L7 6 6.44e-01 0.10900 8.33e-01
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) PHOSPHATIDYLCHOLINESTEROL O-ACYLTRANSFERASE 5 6.73e-01 0.10900 8.45e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE 21 3.90e-01 -0.10800 6.56e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE 31 2.98e-01 -0.10800 5.82e-01
NOT ASSIGNED NO ONTOLOGY HYDROXYPROLINE RICH PROTEINS 54 1.70e-01 -0.10800 4.43e-01
CELL VESICLE TRANSPORT 154 2.10e-02 -0.10800 1.25e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 10 5.59e-01 0.10700 7.87e-01
SIGNALLING RECEPTOR KINASES WALL ASSOCIATED KINASE 17 4.47e-01 -0.10600 6.85e-01
MISC DYNAMIN 10 5.62e-01 -0.10600 7.88e-01
PROTEIN SYNTHESIS RIBOSOMAL RNA 14 4.92e-01 0.10600 7.23e-01
CO-FACTOR AND VITAMINE METABOLISM PANTOTHENATE PANTOTHENATE KINASE (PANK) 5 6.82e-01 -0.10600 8.45e-01
PROTEIN POSTRANSLATIONAL MODIFICATION 495 5.69e-05 -0.10600 1.81e-03
CELL ORGANISATION 341 8.06e-04 0.10600 1.33e-02
PROTEIN DEGRADATION SERINE PROTEASE 75 1.14e-01 0.10600 3.48e-01
SIGNALLING LIGHT COP9 SIGNALOSOME 12 5.29e-01 -0.10500 7.59e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES 42 2.40e-01 0.10500 5.23e-01
MISC BETA 1,3 GLUCAN HYDROLASES GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 21 4.14e-01 0.10300 6.62e-01
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS FLAVONOL SYNTHASE (FLS) 5 6.93e-01 0.10200 8.45e-01
NOT ASSIGNED NO ONTOLOGY AGENET DOMAIN-CONTAINING PROTEIN 15 4.97e-01 -0.10100 7.26e-01
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE 23 4.01e-01 -0.10100 6.57e-01
SIGNALLING CALCIUM 196 1.56e-02 -0.10000 1.12e-01
RNA REGULATION OF TRANSCRIPTION ZN-FINGER(CCHC) 10 5.86e-01 -0.09950 7.97e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA CHORISMATE SHIKIMATE KINASE 5 7.03e-01 -0.09840 8.45e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE III 5 7.08e-01 0.09690 8.45e-01
RNA REGULATION OF TRANSCRIPTION E2F/DP TRANSCRIPTION FACTOR FAMILY 8 6.35e-01 -0.09680 8.29e-01
SIGNALLING RECEPTOR KINASES PROLINE EXTENSIN LIKE 14 5.31e-01 0.09660 7.60e-01
MISC GLUTATHIONE S TRANSFERASES 51 2.37e-01 0.09570 5.23e-01
RNA REGULATION OF TRANSCRIPTION PWWP DOMAIN PROTEIN 11 5.83e-01 -0.09560 7.97e-01
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR) 27 3.97e-01 0.09430 6.56e-01
STRESS ABIOTIC 22 4.45e-01 -0.09410 6.84e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE INVERTASES NEUTRAL 8 6.48e-01 -0.09320 8.34e-01
RNA REGULATION OF TRANSCRIPTION UNCLASSIFIED 272 8.35e-03 -0.09290 7.45e-02
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES URIDYLATE KINASE 6 6.95e-01 0.09230 8.45e-01
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS ATP-CITRATE LYASE 5 7.22e-01 0.09180 8.53e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TYROSINE 6 6.99e-01 -0.09120 8.45e-01
RNA REGULATION OF TRANSCRIPTION ARR 14 5.64e-01 -0.08910 7.88e-01
BIODEGRADATION OF XENOBIOTICS 8 6.63e-01 0.08890 8.42e-01
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CAD 8 6.64e-01 -0.08870 8.42e-01
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN 28 4.18e-01 0.08850 6.62e-01
TCA / ORG TRANSFORMATION CARBONIC ANHYDRASES 10 6.31e-01 -0.08770 8.29e-01
PROTEIN AA ACTIVATION 9 6.49e-01 0.08760 8.34e-01
STRESS BIOTIC RECEPTORS 16 5.47e-01 -0.08690 7.75e-01
RNA PROCESSING 108 1.27e-01 -0.08510 3.79e-01
CELL WALL HEMICELLULOSE SYNTHESIS 13 6.02e-01 -0.08350 8.06e-01
CELL CYCLE PEPTIDYLPROLYL ISOMERASE 32 4.14e-01 0.08340 6.62e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT X 11 6.33e-01 -0.08310 8.29e-01
TRANSPORT P- AND V-ATPASES 29 4.41e-01 0.08270 6.80e-01
STRESS 8 6.88e-01 0.08190 8.45e-01
NOT ASSIGNED NO ONTOLOGY TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN 7 7.10e-01 -0.08110 8.45e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP3 8 6.92e-01 -0.08100 8.45e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNAS 15 5.93e-01 -0.07960 8.02e-01
SIGNALLING PHOSPHORELAY 5 7.58e-01 -0.07940 8.74e-01
TRANSPORT PORINS 5 7.61e-01 -0.07840 8.74e-01
MISC MYROSINASES-LECTIN-JACALIN 45 3.65e-01 -0.07800 6.34e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE SUSY 6 7.43e-01 0.07710 8.64e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF SKP 16 5.95e-01 -0.07670 8.02e-01
HORMONE METABOLISM SALICYLIC ACID SYNTHESIS-DEGRADATION 9 6.91e-01 -0.07640 8.45e-01
STRESS ABIOTIC HEAT 164 9.31e-02 -0.07600 3.12e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL-COA THIOESTERASE 9 6.97e-01 0.07480 8.45e-01
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 30 4.84e-01 0.07390 7.17e-01
NOT ASSIGNED NO ONTOLOGY PUMILIO/PUF RNA-BINDING DOMAIN-CONTAINING PROTEIN 10 6.95e-01 0.07160 8.45e-01
HORMONE METABOLISM JASMONATE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 12 6.70e-01 0.07110 8.45e-01
RNA REGULATION OF TRANSCRIPTION HDA 16 6.34e-01 -0.06870 8.29e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE MITOCHONDRIAL MEMBRANE 64 3.43e-01 0.06860 6.22e-01
CELL WALL MODIFICATION 48 4.14e-01 0.06820 6.62e-01
RNA REGULATION OF TRANSCRIPTION AUX/IAA FAMILY 25 5.58e-01 0.06760 7.87e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS 16 6.41e-01 0.06740 8.31e-01
TRANSPORT UNSPECIFIED CATIONS 38 4.73e-01 0.06730 7.07e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE IX 11 7.03e-01 0.06650 8.45e-01
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CCOAOMT 6 7.78e-01 0.06640 8.83e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE 10 7.19e-01 -0.06570 8.53e-01
NOT ASSIGNED NO ONTOLOGY BSD DOMAIN-CONTAINING PROTEIN 7 7.69e-01 0.06410 8.79e-01
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED 72 3.50e-01 -0.06370 6.25e-01
TRANSPORT ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS 105 2.66e-01 0.06280 5.54e-01
MISC CYTOCHROME P450 152 1.89e-01 0.06180 4.73e-01
REDOX ASCORBATE AND GLUTATHIONE 23 6.13e-01 0.06100 8.11e-01
LIPID METABOLISM LIPID TRANSFER PROTEINS ETC 13 7.04e-01 0.06090 8.45e-01
RNA REGULATION OF TRANSCRIPTION ABI3/VP1-RELATED B3-DOMAIN-CONTAINING TRANSCRIPTION FACTOR FAMILY 10 7.39e-01 -0.06080 8.63e-01
PROTEIN AA ACTIVATION ASPARAGINE-TRNA LIGASE 5 8.16e-01 -0.06020 9.07e-01
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION BRI 6 8.00e-01 0.05970 9.01e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS DEXD-BOX HELICASES 14 7.01e-01 -0.05930 8.45e-01
RNA RNA BINDING 164 1.99e-01 -0.05810 4.83e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES TRIACYLGLYCEROL LIPASE 27 6.03e-01 -0.05780 8.06e-01
TCA / ORG TRANSFORMATION TCA IDH 5 8.28e-01 -0.05620 9.11e-01
PROTEIN TARGETING MITOCHONDRIA 33 5.77e-01 -0.05620 7.94e-01
SIGNALLING PHOSPHINOSITIDES 17 6.92e-01 0.05550 8.45e-01
SECONDARY METABOLISM ISOPRENOIDS NON-MEVALONATE PATHWAY 7 8.00e-01 0.05520 9.01e-01
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) SPHINGOLIPIDS 18 6.88e-01 -0.05480 8.45e-01
MISC SHORT CHAIN DEHYDROGENASE/REDUCTASE (SDR) 44 5.35e-01 0.05410 7.62e-01
NOT ASSIGNED NO ONTOLOGY ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN 31 6.07e-01 0.05340 8.06e-01
PROTEIN DEGRADATION UBIQUITIN E3 HECT 7 8.09e-01 -0.05280 9.02e-01
SIGNALLING LIGHT 89 3.91e-01 0.05260 6.56e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN 12 7.55e-01 0.05200 8.74e-01
RNA REGULATION OF TRANSCRIPTION HB,HOMEOBOX TRANSCRIPTION FACTOR FAMILY 71 4.54e-01 -0.05140 6.88e-01
RNA REGULATION OF TRANSCRIPTION CPP(ZN),CPP1-RELATED TRANSCRIPTION FACTOR FAMILY 8 8.03e-01 0.05090 9.02e-01
CELL DIVISION 92 4.15e-01 0.04920 6.62e-01
RNA REGULATION OF TRANSCRIPTION BHLH,BASIC HELIX-LOOP-HELIX FAMILY 113 3.76e-01 -0.04820 6.45e-01
STRESS ABIOTIC DROUGHT/SALT 66 5.05e-01 0.04750 7.33e-01
NOT ASSIGNED UNKNOWN 4553 1.44e-06 -0.04650 1.07e-04
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L34 10 8.08e-01 -0.04450 9.02e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNPS 14 7.74e-01 0.04430 8.83e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL-COA BINDING PROTEIN 6 8.53e-01 0.04360 9.27e-01
CELL CYCLE 85 4.88e-01 -0.04350 7.18e-01
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS 8 8.31e-01 0.04350 9.13e-01
CELL WALL CELL WALL PROTEINS RGP 5 8.68e-01 -0.04290 9.28e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN PROTEASE 20 7.42e-01 -0.04250 8.64e-01
AMINO ACID METABOLISM SYNTHESIS SERINE-GLYCINE-CYSTEINE GROUP CYSTEINE OASTL 10 8.21e-01 0.04130 9.08e-01
HORMONE METABOLISM ABSCISIC ACID SYNTHESIS-DEGRADATION 10 8.21e-01 -0.04120 9.08e-01
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN 54 6.02e-01 -0.04110 8.06e-01
NUCLEOTIDE METABOLISM DEGRADATION 25 7.28e-01 0.04020 8.54e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) GATA TRANSCRIPTION FACTOR FAMILY 26 7.25e-01 0.03990 8.53e-01
RNA PROCESSING RNA HELICASE 33 7.11e-01 -0.03730 8.45e-01
NOT ASSIGNED NO ONTOLOGY 1407 2.10e-02 -0.03670 1.25e-01
HORMONE METABOLISM GIBBERELIN SIGNAL TRANSDUCTION 7 8.70e-01 -0.03580 9.28e-01
NOT ASSIGNED NO ONTOLOGY C2 DOMAIN-CONTAINING PROTEIN 37 7.10e-01 0.03540 8.45e-01
RNA REGULATION OF TRANSCRIPTION SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY 34 7.23e-01 0.03520 8.53e-01
OPP OXIDATIVE PP G6PD 6 8.82e-01 -0.03500 9.34e-01
DEVELOPMENT SQUAMOSA PROMOTER BINDING LIKE (SPL) 16 8.09e-01 0.03500 9.02e-01
SIGNALLING UNSPECIFIED 8 8.66e-01 -0.03450 9.28e-01
SIGNALLING IN SUGAR AND NUTRIENT PHYSIOLOGY 32 7.37e-01 -0.03430 8.63e-01
RNA REGULATION OF TRANSCRIPTION METHYL BINDING DOMAIN PROTEINS 10 8.54e-01 -0.03360 9.27e-01
CO-FACTOR AND VITAMINE METABOLISM 15 8.23e-01 0.03340 9.08e-01
TRANSPORT MISC 113 5.70e-01 0.03100 7.90e-01
TRANSPORT SUGARS 58 6.89e-01 0.03040 8.45e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS 11 8.63e-01 0.03010 9.28e-01
TRANSPORT METAL 65 6.80e-01 0.02960 8.45e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE 203 4.83e-01 0.02860 7.17e-01
RNA REGULATION OF TRANSCRIPTION GEBP LIKE 11 8.71e-01 0.02820 9.28e-01
TRANSPORT POTASSIUM 36 7.84e-01 0.02640 8.88e-01
SIGNALLING RECEPTOR KINASES DUF 26 39 7.77e-01 -0.02630 8.83e-01
METAL HANDLING ACQUISITION 9 8.97e-01 -0.02480 9.47e-01
RNA REGULATION OF TRANSCRIPTION PHD FINGER TRANSCRIPTION FACTOR 10 8.98e-01 0.02340 9.47e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS DIACYLGLYCEROL KINASE 6 9.21e-01 -0.02340 9.60e-01
PROTEIN DEGRADATION UBIQUITIN 59 7.57e-01 -0.02330 8.74e-01
DEVELOPMENT STORAGE PROTEINS 17 8.73e-01 0.02240 9.28e-01
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 18 8.73e-01 0.02170 9.28e-01
MISC ALCOHOL DEHYDROGENASES 8 9.17e-01 0.02130 9.60e-01
HORMONE METABOLISM GIBBERELIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 13 9.01e-01 -0.02000 9.47e-01
C1-METABOLISM GLYCINE HYDROXYMETHYLTRANSFERASE 7 9.31e-01 0.01900 9.60e-01
TRANSPORT NDP-SUGARS AT THE ER 7 9.31e-01 0.01900 9.60e-01
REDOX GLUTAREDOXINS 38 8.43e-01 0.01860 9.22e-01
GLYCOLYSIS CYTOSOLIC BRANCH PYRUVATE KINASE (PK) 6 9.38e-01 -0.01830 9.62e-01
RNA REGULATION OF TRANSCRIPTION POLYCOMB GROUP (PCG) 7 9.34e-01 -0.01810 9.60e-01
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY 42 8.43e-01 0.01760 9.22e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP5 9 9.33e-01 0.01610 9.60e-01
HORMONE METABOLISM GIBBERELIN SYNTHESIS-DEGRADATION 7 9.46e-01 0.01470 9.68e-01
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR 144 7.62e-01 -0.01460 8.74e-01
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 56 8.72e-01 -0.01240 9.28e-01
STRESS ABIOTIC UNSPECIFIED 82 8.48e-01 0.01230 9.25e-01
MISC ACID AND OTHER PHOSPHATASES 63 8.71e-01 -0.01180 9.28e-01
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CCR1 5 9.64e-01 0.01170 9.76e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) CO-LIKE, CONSTANS-LIKE ZINC FINGER FAMILY 25 9.25e-01 0.01090 9.60e-01
SIGNALLING RECEPTOR KINASES CRINKLY LIKE 8 9.61e-01 0.01010 9.76e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL COA LIGASE 18 9.58e-01 0.00725 9.75e-01
RNA REGULATION OF TRANSCRIPTION BBR/BPC 7 9.75e-01 0.00675 9.80e-01
HORMONE METABOLISM AUXIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 105 9.07e-01 0.00662 9.52e-01
SIGNALLING 14-3-3 PROTEINS 10 9.73e-01 -0.00620 9.80e-01
TRANSPORT CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS 20 9.65e-01 -0.00565 9.76e-01
PROTEIN DEGRADATION 133 9.20e-01 0.00502 9.60e-01
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION 12 9.80e-01 -0.00428 9.82e-01
SIGNALLING G-PROTEINS 215 9.29e-01 0.00355 9.60e-01
RNA REGULATION OF TRANSCRIPTION DNA METHYLTRANSFERASES 8 9.89e-01 0.00281 9.89e-01
MISC PEROXIDASES 60 9.73e-01 -0.00252 9.80e-01
DEVELOPMENT UNSPECIFIED 566 9.57e-01 0.00133 9.75e-01


Detailed Gene set reports



PS_CALVIN_CYCLE_RUBISCO_INTERACTING

PS_CALVIN_CYCLE_RUBISCO_INTERACTING
257
set PS_CALVIN_CYCLE_RUBISCO_INTERACTING
setSize 6
pANOVA 0.000582
s.dist 0.811
p.adjustANOVA 0.0108



Top enriched genes

Top 20 genes
GeneID Gene Rank
CPN60A1 10466
RCA 10404
CPN60B1 10117
PTAC14 9923
LSMT-L 5979
AT1G73110 5032

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CPN60A1 10466
RCA 10404
CPN60B1 10117
PTAC14 9923
LSMT-L 5979
AT1G73110 5032


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_XIII

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_XIII
391
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_XIII
setSize 7
pANOVA 0.000234
s.dist 0.803
p.adjustANOVA 0.00549



Top enriched genes

Top 20 genes
GeneID Gene Rank
FEI2 10494
AT5G62710 10301
FEI1 9379
AT1G78530 9092
ERL2 9012
ERECTA 7927
ERL1 3780

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FEI2 10494
AT5G62710 10301
FEI1 9379
AT1G78530 9092
ERL2 9012
ERECTA 7927
ERL1 3780


AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE

AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE
12
set AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE
setSize 6
pANOVA 0.00155
s.dist 0.746
p.adjustANOVA 0.0238



Top enriched genes

Top 20 genes
GeneID Gene Rank
BCAT4 10641
BCAT3 10464
ATBCAT-1 10183
ATBCAT-5 9122
BCAT6 9075
BCAT2 -1693

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
BCAT4 10641
BCAT3 10464
ATBCAT-1 10183
ATBCAT-5 9122
BCAT6 9075
BCAT2 -1693


AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_TRYPTOPHAN_SYNTHASE

AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_TRYPTOPHAN_SYNTHASE
10
set AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_TRYPTOPHAN_SYNTHASE
setSize 6
pANOVA 0.00536
s.dist 0.656
p.adjustANOVA 0.0543



Top enriched genes

Top 20 genes
GeneID Gene Rank
TSA1 10632
AT5G28237 10186
TSB1 10052
TSBtype2 6143
TRPA1 5749
TSB2 -707

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
TSA1 10632
AT5G28237 10186
TSB1 10052
TSBtype2 6143
TRPA1 5749
TSB2 -707


SIGNALLING_RECEPTOR_KINASES_EXTENSIN

SIGNALLING_RECEPTOR_KINASES_EXTENSIN
378
set SIGNALLING_RECEPTOR_KINASES_EXTENSIN
setSize 5
pANOVA 0.0159
s.dist 0.623
p.adjustANOVA 0.113



Top enriched genes

Top 20 genes
GeneID Gene Rank
ALE2 9581
AT1G54820 9233
AT4G02010 8204
AT5G56890 8118
AT3G58690 -1894

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ALE2 9581
AT1G54820 9233
AT4G02010 8204
AT5G56890 8118
AT3G58690 -1894


NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_ADENYLATE_KINASE

NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_ADENYLATE_KINASE
184
set NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_ADENYLATE_KINASE
setSize 7
pANOVA 0.00463
s.dist 0.618
p.adjustANOVA 0.0491



Top enriched genes

Top 20 genes
GeneID Gene Rank
ADK2 10332
AMK2 9833
ADK1 9076
AT5G35170 8305
AT2G39270 7987
ADK 3479
AT3G01820 -2810

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ADK2 10332
AMK2 9833
ADK1 9076
AT5G35170 8305
AT2G39270 7987
ADK 3479
AT3G01820 -2810


PS_LIGHTREACTION_PHOTOSYSTEM_I_LHC-I

PS_LIGHTREACTION_PHOTOSYSTEM_I_LHC-I
264
set PS_LIGHTREACTION_PHOTOSYSTEM_I_LHC-I
setSize 8
pANOVA 0.003
s.dist 0.606
p.adjustANOVA 0.0406



Top enriched genes

Top 20 genes
GeneID Gene Rank
LHCA6 10383
OHP2 10329
LHCA5 9219
LHCA2 8471
LHCA3 5157
LHCA1 3730
LHCA4 2327
AT5G28450 2150

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
LHCA6 10383
OHP2 10329
LHCA5 9219
LHCA2 8471
LHCA3 5157
LHCA1 3730
LHCA4 2327
AT5G28450 2150


TRANSPORT_SULPHATE

TRANSPORT_SULPHATE
444
set TRANSPORT_SULPHATE
setSize 12
pANOVA 0.000292
s.dist -0.604
p.adjustANOVA 0.0062



Top enriched genes

Top 20 genes
GeneID Gene Rank
SULTR1;2 -10631
SULTR3;5 -10607
SULTR4;2 -10600
SULTR2;2 -10580
SULTR3;1 -9397
SULTR3;4 -8974
SULTR4;1 -8877
SULTR1;3 -8578
SULTR1;1 -7953
SULTR2;1 1237
SULTR3;2 2707
SULTR3;3 5319

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SULTR1;2 -10631
SULTR3;5 -10607
SULTR4;2 -10600
SULTR2;2 -10580
SULTR3;1 -9397
SULTR3;4 -8974
SULTR4;1 -8877
SULTR1;3 -8578
SULTR1;1 -7953
SULTR2;1 1237
SULTR3;2 2707
SULTR3;3 5319


OPP_OXIDATIVE_PP_6-PHOSPHOGLUCONATE_DEHYDROGENASE

OPP_OXIDATIVE_PP_6-PHOSPHOGLUCONATE_DEHYDROGENASE
192
set OPP_OXIDATIVE_PP_6-PHOSPHOGLUCONATE_DEHYDROGENASE
setSize 7
pANOVA 0.00625
s.dist 0.597
p.adjustANOVA 0.0619



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G29120 9303
AT1G71170 8112
GLYR1 7253
PGD2 6191
PGD1 5721
AT1G71180 5697
PGD3 2340

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G29120 9303
AT1G71170 8112
GLYR1 7253
PGD2 6191
PGD1 5721
AT1G71180 5697
PGD3 2340


PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS

PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS
265
set PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS
setSize 18
pANOVA 1.19e-05
s.dist 0.596
p.adjustANOVA 0.000441



Top enriched genes

Top 20 genes
GeneID Gene Rank
CURT1B 10225
PSAH2 10168
PSAN 10059
PSAK 9866
PSAF 9389
PSAH1 9130
PSAL 9053
PSAE1 8676
PSAG 8531
PSAO 7127
PSAD2 6559
PSAD1 6013
PSAI 4748
PSAE2 4739
PSAA 791
PSAB 784
PSAC -122
PSAJ -1182

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CURT1B 10225
PSAH2 10168
PSAN 10059
PSAK 9866
PSAF 9389
PSAH1 9130
PSAL 9053
PSAE1 8676
PSAG 8531
PSAO 7127
PSAD2 6559
PSAD1 6013
PSAI 4748
PSAE2 4739
PSAA 791
PSAB 784
PSAC -122
PSAJ -1182


SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE

SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE
343
set SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE
setSize 8
pANOVA 0.00352
s.dist 0.596
p.adjustANOVA 0.0462



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G39080 8465
AT3G29680 7745
PMAT2 7332
5MAT 6804
PMAT1 6067
3AT1 5764
AT1G03495 5399
AT5G39090 3318

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G39080 8465
AT3G29680 7745
PMAT2 7332
5MAT 6804
PMAT1 6067
3AT1 5764
AT1G03495 5399
AT5G39090 3318


RNA_REGULATION_OF_TRANSCRIPTION_SIGMA_LIKE_PLANT

RNA_REGULATION_OF_TRANSCRIPTION_SIGMA_LIKE_PLANT
332
set RNA_REGULATION_OF_TRANSCRIPTION_SIGMA_LIKE_PLANT
setSize 6
pANOVA 0.0117
s.dist 0.595
p.adjustANOVA 0.0944



Top enriched genes

Top 20 genes
GeneID Gene Rank
SIGA 10017
SIGF 9813
SIGB 8251
SIGD 4143
SIGE 3268
SIGC 2608

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SIGA 10017
SIGF 9813
SIGB 8251
SIGD 4143
SIGE 3268
SIGC 2608


MAJOR_CHO_METABOLISM_DEGRADATION_SUCROSE_FRUCTOKINASE

MAJOR_CHO_METABOLISM_DEGRADATION_SUCROSE_FRUCTOKINASE
112
set MAJOR_CHO_METABOLISM_DEGRADATION_SUCROSE_FRUCTOKINASE
setSize 7
pANOVA 0.00729
s.dist 0.586
p.adjustANOVA 0.0677



Top enriched genes

Top 20 genes
GeneID Gene Rank
FLN1 10067
AT1G66430 9767
AT5G51830 9693
FLN2 7928
AT1G50390 4690
AT3G59480 2125
AT2G31390 -485

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FLN1 10067
AT1G66430 9767
AT5G51830 9693
FLN2 7928
AT1G50390 4690
AT3G59480 2125
AT2G31390 -485


PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS

PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS
263
set PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS
setSize 44
pANOVA 3.37e-11
s.dist 0.577
p.adjustANOVA 1.5e-08



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G11450 10105
PSBQ1 10101
PSBS 10016
PPD1 9969
PSBTN 9859
PNSL1 9606
PSBX 9414
PPD6 9385
PSBP1 9373
PSBZ 9367
PSB27-1 9216
PNSL2 9158
PSBY 8894
PSBP2 8812
PPD3 8689
PSBR 8430
PPL1 7943
PSB28 7941
AT1G51400 7829
PPD4 7698

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G11450 10105
PSBQ1 10101
PSBS 10016
PPD1 9969
PSBTN 9859
PNSL1 9606
PSBX 9414
PPD6 9385
PSBP1 9373
PSBZ 9367
PSB27-1 9216
PNSL2 9158
PSBY 8894
PSBP2 8812
PPD3 8689
PSBR 8430
PPL1 7943
PSB28 7941
AT1G51400 7829
PPD4 7698
PSBO2 7683
PSBW 7680
PSB27-2 7599
PSBO1 7228
PSBD 6829
PSBM 5227
LPA2 4962
PSBJ 4919
PSBI 4756
PQL3 4753
PSBQ2 4624
PNSL3 4382
PPD2 4116
PSBF 3939
OHP1 3618
PSBH 2946
PSBB 2685
PSBL 2464
PSBN 2070
PSBC 1832
PSBT 1293
PSBE -1510
PSBA -1755
PSBK -3274


PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II

PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II
262
set PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II
setSize 14
pANOVA 0.000222
s.dist 0.57
p.adjustANOVA 0.00549



Top enriched genes

Top 20 genes
GeneID Gene Rank
LHCB1.1 9238
LHCB4.1 8593
LHCB2.4 8560
LHCB4.3 8027
LHCB6 7974
LHCB5 7342
LHCB4.2 7061
LHCB2.2 6192
LHCB1.3 5980
LHCB2.1 5825
LHCB3 5441
LHB1B1 5061
LHB1B2 2884
LHCB7 -2982

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
LHCB1.1 9238
LHCB4.1 8593
LHCB2.4 8560
LHCB4.3 8027
LHCB6 7974
LHCB5 7342
LHCB4.2 7061
LHCB2.2 6192
LHCB1.3 5980
LHCB2.1 5825
LHCB3 5441
LHB1B1 5061
LHB1B2 2884
LHCB7 -2982


TCA_/_ORG_TRANSFORMATION_TCA_SUCCINATE_DEHYDROGENASE

TCA_/_ORG_TRANSFORMATION_TCA_SUCCINATE_DEHYDROGENASE
420
set TCA_/_ORG_TRANSFORMATION_TCA_SUCCINATE_DEHYDROGENASE
setSize 5
pANOVA 0.0273
s.dist 0.57
p.adjustANOVA 0.147



Top enriched genes

Top 20 genes
GeneID Gene Rank
SDH4 9459
SDH2-1 7307
SDH2-2 6037
SDH1-1 6009
SDH3-1 1626

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SDH4 9459
SDH2-1 7307
SDH2-2 6037
SDH1-1 6009
SDH3-1 1626


SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE

SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE
348
set SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE
setSize 7
pANOVA 0.0107
s.dist -0.557
p.adjustANOVA 0.0883



Top enriched genes

Top 20 genes
GeneID Gene Rank
PRR2 -10014
AT1G75280 -9935
PLR3 -9785
AT1G75290 -8000
AT1G19540 -7732
AT1G75300 -3926
PCBER1 7984

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
PRR2 -10014
AT1G75280 -9935
PLR3 -9785
AT1G75290 -8000
AT1G19540 -7732
AT1G75300 -3926
PCBER1 7984


PS_LIGHTREACTION_CYTOCHROME_B6/F

PS_LIGHTREACTION_CYTOCHROME_B6/F
259
set PS_LIGHTREACTION_CYTOCHROME_B6/F
setSize 6
pANOVA 0.021
s.dist 0.544
p.adjustANOVA 0.125



Top enriched genes

Top 20 genes
GeneID Gene Rank
CCB3 10300
PETC 10030
PETN 8809
AT2G26500 7131
PETG -457
ORF31 -932

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CCB3 10300
PETC 10030
PETN 8809
AT2G26500 7131
PETG -457
ORF31 -932


CELL_WALL_CELLULOSE_SYNTHESIS

CELL_WALL_CELLULOSE_SYNTHESIS
27
set CELL_WALL_CELLULOSE_SYNTHESIS
setSize 14
pANOVA 0.00044
s.dist 0.542
p.adjustANOVA 0.00893



Top enriched genes

Top 20 genes
GeneID Gene Rank
CSLA15 10492
ATCSLA11 10193
ATCSLA01 10121
PNT1 9511
KOR 9422
CSLC5 9128
CSLC8 7370
CSLC6 6605
CSLA9 6199
CSLA10 5848
CSLA14 1963
CSLC4 395
CSLC12 -210
CSLA2 -5933

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CSLA15 10492
ATCSLA11 10193
ATCSLA01 10121
PNT1 9511
KOR 9422
CSLC5 9128
CSLC8 7370
CSLC6 6605
CSLA9 6199
CSLA10 5848
CSLA14 1963
CSLC4 395
CSLC12 -210
CSLA2 -5933


LIPID_METABOLISM_FA_DESATURATION_DESATURASE

LIPID_METABOLISM_FA_DESATURATION_DESATURASE
89
set LIPID_METABOLISM_FA_DESATURATION_DESATURASE
setSize 7
pANOVA 0.0137
s.dist 0.538
p.adjustANOVA 0.104



Top enriched genes

Top 20 genes
GeneID Gene Rank
ADS3 9796
ADS1 8369
AT1G06100 7583
AT1G06350 6506
ADS2 3905
AT1G06090 3706
AT1G06360 348

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ADS3 9796
ADS1 8369
AT1G06100 7583
AT1G06350 6506
ADS2 3905
AT1G06090 3706
AT1G06360 348


BIODEGRADATION_OF_XENOBIOTICS_HYDROXYACYLGLUTATHIONE_HYDROLASE

BIODEGRADATION_OF_XENOBIOTICS_HYDROXYACYLGLUTATHIONE_HYDROLASE
16
set BIODEGRADATION_OF_XENOBIOTICS_HYDROXYACYLGLUTATHIONE_HYDROLASE
setSize 5
pANOVA 0.0451
s.dist -0.517
p.adjustANOVA 0.201



Top enriched genes

Top 20 genes
GeneID Gene Rank
GLX2-5 -10194
GLX2-4 -7407
GLX2-1 -5590
GLY3 -3350
GLX2-2 -927

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
GLX2-5 -10194
GLX2-4 -7407
GLX2-1 -5590
GLY3 -3350
GLX2-2 -927


N-METABOLISM_AMMONIA_METABOLISM_GLUTAMINE_SYNTHETASE

N-METABOLISM_AMMONIA_METABOLISM_GLUTAMINE_SYNTHETASE
161
set N-METABOLISM_AMMONIA_METABOLISM_GLUTAMINE_SYNTHETASE
setSize 6
pANOVA 0.029
s.dist 0.515
p.adjustANOVA 0.149



Top enriched genes

Top 20 genes
GeneID Gene Rank
ATGSR2 10408
GLN1-4 9884
GLN2 6607
GLN1-1 6168
GLN1-3 4993
AT3G53180 -5054

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ATGSR2 10408
GLN1-4 9884
GLN2 6607
GLN1-1 6168
GLN1-3 4993
AT3G53180 -5054


BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE

BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE
17
set BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE
setSize 10
pANOVA 0.00643
s.dist 0.498
p.adjustANOVA 0.062



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G57040 9294
AT2G28420 8786
AT1G67280 7346
AT5G41650 7185
ATGLX1 7036
AT1G08110 6803
AT1G64185 5276
AT1G80160 4627
AT2G32090 -165
AT1G15380 -3015

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G57040 9294
AT2G28420 8786
AT1G67280 7346
AT5G41650 7185
ATGLX1 7036
AT1G08110 6803
AT1G64185 5276
AT1G80160 4627
AT2G32090 -165
AT1G15380 -3015


RNA_REGULATION_OF_TRANSCRIPTION_SNF7

RNA_REGULATION_OF_TRANSCRIPTION_SNF7
333
set RNA_REGULATION_OF_TRANSCRIPTION_SNF7
setSize 12
pANOVA 0.00293
s.dist -0.496
p.adjustANOVA 0.0406



Top enriched genes

Top 20 genes
GeneID Gene Rank
VPS60.2 -8492
VPS60.1 -7811
VPS2.1 -7432
AT3G62080 -7250
VPS24-1 -7184
CHMP1A -6964
VPS32.2 -5079
VPS20.1 -5030
VPS2.3 -4778
CHMP1B -3821
VPS32.1 101
VPS2.2 588

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
VPS60.2 -8492
VPS60.1 -7811
VPS2.1 -7432
AT3G62080 -7250
VPS24-1 -7184
CHMP1A -6964
VPS32.2 -5079
VPS20.1 -5030
VPS2.3 -4778
CHMP1B -3821
VPS32.1 101
VPS2.2 588


MISC_RHODANESE

MISC_RHODANESE
152
set MISC_RHODANESE
setSize 7
pANOVA 0.0233
s.dist 0.495
p.adjustANOVA 0.132



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G27700 9427
STR10 8727
AT5G19370 7822
STR9 7670
STR4A 4227
CDC25 4080
STR7 -4927

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G27700 9427
STR10 8727
AT5G19370 7822
STR9 7670
STR4A 4227
CDC25 4080
STR7 -4927


MAJOR_CHO_METABOLISM_SYNTHESIS_STARCH_AGPASE

MAJOR_CHO_METABOLISM_SYNTHESIS_STARCH_AGPASE
116
set MAJOR_CHO_METABOLISM_SYNTHESIS_STARCH_AGPASE
setSize 8
pANOVA 0.0169
s.dist 0.488
p.adjustANOVA 0.116



Top enriched genes

Top 20 genes
GeneID Gene Rank
APS1 10642
APS2 10531
APL4 8309
ADG2 6946
APL3 5974
APL2 2724
AT1G74910 1480
AT2G04650 -4896

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
APS1 10642
APS2 10531
APL4 8309
ADG2 6946
APL3 5974
APL2 2724
AT1G74910 1480
AT2G04650 -4896


CELL_WALL_PRECURSOR_SYNTHESIS_GAE

CELL_WALL_PRECURSOR_SYNTHESIS_GAE
40
set CELL_WALL_PRECURSOR_SYNTHESIS_GAE
setSize 6
pANOVA 0.0392
s.dist 0.486
p.adjustANOVA 0.182



Top enriched genes

Top 20 genes
GeneID Gene Rank
GAE6 10613
GAE3 8879
GAE5 8397
GAE2 3045
GAE4 656
GAE1 -419

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
GAE6 10613
GAE3 8879
GAE5 8397
GAE2 3045
GAE4 656
GAE1 -419


TRANSPORT_AMMONIUM

TRANSPORT_AMMONIUM
423
set TRANSPORT_AMMONIUM
setSize 6
pANOVA 0.0398
s.dist 0.485
p.adjustANOVA 0.183



Top enriched genes

Top 20 genes
GeneID Gene Rank
AMT2 10111
DRG2 9084
AMT1-3 7085
AMT1-2 5709
AMT1-1 5223
DRG1 -6138

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AMT2 10111
DRG2 9084
AMT1-3 7085
AMT1-2 5709
AMT1-1 5223
DRG1 -6138


RNA_REGULATION_OF_TRANSCRIPTION_FHA_TRANSCRIPTION_FACTOR

RNA_REGULATION_OF_TRANSCRIPTION_FHA_TRANSCRIPTION_FACTOR
306
set RNA_REGULATION_OF_TRANSCRIPTION_FHA_TRANSCRIPTION_FACTOR
setSize 7
pANOVA 0.0278
s.dist -0.48
p.adjustANOVA 0.147



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G07400 -9921
FHA1 -8296
AT5G47790 -7008
AT1G60700 -6809
AT2G45460 -5365
FHA2 -5248
PS1 6971

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G07400 -9921
FHA1 -8296
AT5G47790 -7008
AT1G60700 -6809
AT2G45460 -5365
FHA2 -5248
PS1 6971


HORMONE_METABOLISM_BRASSINOSTEROID_SYNTHESIS-DEGRADATION_STEROLS_OTHER

HORMONE_METABOLISM_BRASSINOSTEROID_SYNTHESIS-DEGRADATION_STEROLS_OTHER
71
set HORMONE_METABOLISM_BRASSINOSTEROID_SYNTHESIS-DEGRADATION_STEROLS_OTHER
setSize 8
pANOVA 0.0188
s.dist 0.48
p.adjustANOVA 0.121



Top enriched genes

Top 20 genes
GeneID Gene Rank
SQE1 8592
CPI1 8541
SQE3 7756
SQE5 7249
CAS1 7160
SQE2 3718
SQE6 -933
AT5G24155 -1077

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SQE1 8592
CPI1 8541
SQE3 7756
SQE5 7249
CAS1 7160
SQE2 3718
SQE6 -933
AT5G24155 -1077


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V
383
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V
setSize 8
pANOVA 0.024
s.dist 0.461
p.adjustANOVA 0.132



Top enriched genes

Top 20 genes
GeneID Gene Rank
SRF8 10289
SUB 9049
SRF7 8225
SRF1 7818
SRF3 6403
SRF6 5635
SRF4 -493
SRF2 -7516

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SRF8 10289
SUB 9049
SRF7 8225
SRF1 7818
SRF3 6403
SRF6 5635
SRF4 -493
SRF2 -7516


PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_X

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_X
227
set PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_X
setSize 8
pANOVA 0.0259
s.dist 0.455
p.adjustANOVA 0.141



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G32000 9399
AT2G25220 9168
AT1G80870 9008
AT5G51770 7263
AT1G80640 5858
AT2G45590 5519
AT5G11020 236
AT4G25390 -7560

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G32000 9399
AT2G25220 9168
AT1G80870 9008
AT5G51770 7263
AT1G80640 5858
AT2G45590 5519
AT5G11020 236
AT4G25390 -7560


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII
385
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII
setSize 9
pANOVA 0.0182
s.dist 0.455
p.adjustANOVA 0.121



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT3G28040 9549
AT1G75640 9287
IRK 7884
PXC2 7748
AT4G36180 5737
AT1G12460 4555
AT1G62950 1557
AT2G24230 676
MEE62 -3256

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT3G28040 9549
AT1G75640 9287
IRK 7884
PXC2 7748
AT4G36180 5737
AT1G12460 4555
AT1G62950 1557
AT2G24230 676
MEE62 -3256


PS_LIGHTREACTION_NADH_DH

PS_LIGHTREACTION_NADH_DH
260
set PS_LIGHTREACTION_NADH_DH
setSize 12
pANOVA 0.00653
s.dist 0.453
p.adjustANOVA 0.062



Top enriched genes

Top 20 genes
GeneID Gene Rank
NDHC 10244
NDHK 10021
NDHJ 9971
CRR3 9230
ndhN 8340
NDHF 6581
ndhL 6462
NDHM 4688
NDHD -71
AT4G37920 -775
ndhO -1434
NDHG -5106

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
NDHC 10244
NDHK 10021
NDHJ 9971
CRR3 9230
ndhN 8340
NDHF 6581
ndhL 6462
NDHM 4688
NDHD -71
AT4G37920 -775
ndhO -1434
NDHG -5106


RNA_REGULATION_OF_TRANSCRIPTION_NUCLEOSOME/CHROMATIN_ASSEMBLY_FACTOR_GROUP

RNA_REGULATION_OF_TRANSCRIPTION_NUCLEOSOME/CHROMATIN_ASSEMBLY_FACTOR_GROUP
323
set RNA_REGULATION_OF_TRANSCRIPTION_NUCLEOSOME/CHROMATIN_ASSEMBLY_FACTOR_GROUP
setSize 13
pANOVA 0.00523
s.dist -0.447
p.adjustANOVA 0.0543



Top enriched genes

Top 20 genes
GeneID Gene Rank
HMGB1 -9508
HMGB5 -9380
HMGB3 -9212
FAS2 -9186
HMGB2 -9021
HMGB12 -8915
AT5G08630 -8417
HMGB10 -8253
SSRP1 -3276
HMGB9 -3051
HMGB4 2120
HMGB7 4716
HMGB6 9715

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
HMGB1 -9508
HMGB5 -9380
HMGB3 -9212
FAS2 -9186
HMGB2 -9021
HMGB12 -8915
AT5G08630 -8417
HMGB10 -8253
SSRP1 -3276
HMGB9 -3051
HMGB4 2120
HMGB7 4716
HMGB6 9715


SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL

SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL
355
set SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL
setSize 8
pANOVA 0.0287
s.dist 0.447
p.adjustANOVA 0.149



Top enriched genes

Top 20 genes
GeneID Gene Rank
4CLL8 9615
4CLL9 9088
4CL2 8538
4CL1 6513
4CLL7 5322
4CL3 4925
4CLL6 3404
4CL4 -9207

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
4CLL8 9615
4CLL9 9088
4CL2 8538
4CL1 6513
4CLL7 5322
4CL3 4925
4CLL6 3404
4CL4 -9207


RNA_REGULATION_OF_TRANSCRIPTION_GLOBAL_TRANSCRIPTION_FACTOR_GROUP

RNA_REGULATION_OF_TRANSCRIPTION_GLOBAL_TRANSCRIPTION_FACTOR_GROUP
310
set RNA_REGULATION_OF_TRANSCRIPTION_GLOBAL_TRANSCRIPTION_FACTOR_GROUP
setSize 14
pANOVA 0.00409
s.dist -0.443
p.adjustANOVA 0.0478



Top enriched genes

Top 20 genes
GeneID Gene Rank
GTE8 -9987
GTE11 -9658
GTE1 -9250
GTE12 -8052
GTE5 -7709
GTE3 -7695
SPT16 -6989
GTE7 -6028
GTE4 -4920
GTE6 -2751
AT2G34210 -1310
BET9 -1103
GTA02 4199
SPT6 5448

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
GTE8 -9987
GTE11 -9658
GTE1 -9250
GTE12 -8052
GTE5 -7709
GTE3 -7695
SPT16 -6989
GTE7 -6028
GTE4 -4920
GTE6 -2751
AT2G34210 -1310
BET9 -1103
GTA02 4199
SPT6 5448


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III
382
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III
setSize 38
pANOVA 2.82e-06
s.dist 0.439
p.adjustANOVA 0.00018



Top enriched genes

Top 20 genes
GeneID Gene Rank
TMKL1 10615
PXC1 10592
AT2G26730 10444
AT1G68400 10284
AT1G60630 9850
LRR1 9823
RKL1 9613
AT3G08680 9132
AT4G23740 9081
RLK902 8690
AT3G57830 8545
AT2G23300 8335
AT5G61570 8321
ZAR1 8220
AT4G20940 7471
AT5G58300 7295
RLK 7184
AT5G10020 6996
AT1G10850 6849
MRLK 6488

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
TMKL1 10615
PXC1 10592
AT2G26730 10444
AT1G68400 10284
AT1G60630 9850
LRR1 9823
RKL1 9613
AT3G08680 9132
AT4G23740 9081
RLK902 8690
AT3G57830 8545
AT2G23300 8335
AT5G61570 8321
ZAR1 8220
AT4G20940 7471
AT5G58300 7295
RLK 7184
AT5G10020 6996
AT1G10850 6849
MRLK 6488
AT5G24100 5785
AT5G43020 5571
AT5G05160 4730
AT4G31250 4506
AT4G34220 4349
AT5G67200 4328
AT5G07620 4265
AT1G67510 4120
AT4G37250 1553
AT1G25320 765
AT2G15300 611
PRK6 562
AT5G41680 -1459
AT2G27060 -3451
AT3G02880 -4524
AT5G53320 -7254
AT1G66830 -9913
AT2G42290 -10297


MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
160
set MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
setSize 34
pANOVA 1.16e-05
s.dist 0.435
p.adjustANOVA 0.000441



Top enriched genes

Top 20 genes
GeneID Gene Rank
NAD9 9916
EMB1467 9443
AT2G20360 8576
CI51 8319
AT4G02580 8189
AT1G49140 8144
AT5G18800 7940
NAD1C 7704
AT1G79010 7697
AT3G03100 7602
AT2G07751 7565
AT5G52840 7428
AT2G02050 7170
AT3G18410 6685
AT1G16700 6387
NAD4 6298
AT3G62790 6127
NAD7 5913
FRO1 5231
NAD2B 4653

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
NAD9 9916
EMB1467 9443
AT2G20360 8576
CI51 8319
AT4G02580 8189
AT1G49140 8144
AT5G18800 7940
NAD1C 7704
AT1G79010 7697
AT3G03100 7602
AT2G07751 7565
AT5G52840 7428
AT2G02050 7170
AT3G18410 6685
AT1G16700 6387
NAD4 6298
AT3G62790 6127
NAD7 5913
FRO1 5231
NAD2B 4653
AT5G47890 4580
NAD5A 4398
AT2G07689 4290
AT2G47690 3933
AT5G11770 3285
NAD2A 1678
AT3G03070 1135
NAD5C 801
NAD6 175
DER2.1 -39
AT2G07785 -2135
AT3G06310 -2224
AT4G26965 -2644
NAD1B -6466


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
384
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
setSize 10
pANOVA 0.0177
s.dist 0.433
p.adjustANOVA 0.12



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G63410 8494
AT5G14210 7873
AT2G02780 7692
AT3G03770 6812
AT1G63430 6201
AT5G07150 5822
AT1G14390 3221
AT5G41180 2108
MDIS2 -534
AT5G45840 -1398

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G63410 8494
AT5G14210 7873
AT2G02780 7692
AT3G03770 6812
AT1G63430 6201
AT5G07150 5822
AT1G14390 3221
AT5G41180 2108
MDIS2 -534
AT5G45840 -1398


STRESS_BIOTIC_REGULATION_OF_TRANSCRIPTION

STRESS_BIOTIC_REGULATION_OF_TRANSCRIPTION
411
set STRESS_BIOTIC_REGULATION_OF_TRANSCRIPTION
setSize 6
pANOVA 0.0702
s.dist -0.427
p.adjustANOVA 0.269



Top enriched genes

Top 20 genes
GeneID Gene Rank
PEP1 -9487
RRS1 -7259
RSH2 -6532
RSH3 -2353
WRKY19 -2256
RRS1B 719

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
PEP1 -9487
RRS1 -7259
RSH2 -6532
RSH3 -2353
WRKY19 -2256
RRS1B 719


PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN

PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN
261
set PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN
setSize 6
pANOVA 0.0716
s.dist 0.425
p.adjustANOVA 0.271



Top enriched genes

Top 20 genes
GeneID Gene Rank
FD2 10292
FD1 9265
AT4G32590 8814
PNSB3 6485
AT1G02180 2434
AT5G07950 -10045

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FD2 10292
FD1 9265
AT4G32590 8814
PNSB3 6485
AT1G02180 2434
AT5G07950 -10045


CELL_WALL_PRECURSOR_SYNTHESIS_UGE

CELL_WALL_PRECURSOR_SYNTHESIS_UGE
41
set CELL_WALL_PRECURSOR_SYNTHESIS_UGE
setSize 5
pANOVA 0.102
s.dist -0.422
p.adjustANOVA 0.323



Top enriched genes

Top 20 genes
GeneID Gene Rank
UGE2 -9546
UGE3 -6533
UGE5 -4449
UGE1 -1554
UGE4 -313

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
UGE2 -9546
UGE3 -6533
UGE5 -4449
UGE1 -1554
UGE4 -313


AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_ANTHRANILATE_SYNTHASE

AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_ANTHRANILATE_SYNTHASE
9
set AMINO_ACID_METABOLISM_SYNTHESIS_AROMATIC_AA_TRYPTOPHAN_ANTHRANILATE_SYNTHASE
setSize 5
pANOVA 0.104
s.dist 0.42
p.adjustANOVA 0.323



Top enriched genes

Top 20 genes
GeneID Gene Rank
ASA1 9090
ASB1 8579
ASA2 7434
ADCS 7150
ASB2 -9782

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ASA1 9090
ASB1 8579
ASA2 7434
ADCS 7150
ASB2 -9782


SIGNALLING_RECEPTOR_KINASES_LEGUME-LECTIN

SIGNALLING_RECEPTOR_KINASES_LEGUME-LECTIN
379
set SIGNALLING_RECEPTOR_KINASES_LEGUME-LECTIN
setSize 10
pANOVA 0.024
s.dist -0.412
p.adjustANOVA 0.132



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT3G08870 -9934
LECRKS2 -9163
LECRK71 -8445
LECRK55 -7210
LECRK42 -4545
AT5G06740 -3567
AT4G29050 -3296
LECRKS7 -1721
LECRK43 198
LECRK44 3986

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT3G08870 -9934
LECRKS2 -9163
LECRK71 -8445
LECRK55 -7210
LECRK42 -4545
AT5G06740 -3567
AT4G29050 -3296
LECRKS7 -1721
LECRK43 198
LECRK44 3986


LIPID_METABOLISM_LIPID_DEGRADATION_BETA-OXIDATION_ACYL_COA_REDUCTASE

LIPID_METABOLISM_LIPID_DEGRADATION_BETA-OXIDATION_ACYL_COA_REDUCTASE
97
set LIPID_METABOLISM_LIPID_DEGRADATION_BETA-OXIDATION_ACYL_COA_REDUCTASE
setSize 6
pANOVA 0.0841
s.dist -0.407
p.adjustANOVA 0.295



Top enriched genes

Top 20 genes
GeneID Gene Rank
FAR4 -10517
FAR5 -10502
FAR1 -9560
FAR8 -8761
FAR7 4249
FAR3 9173

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FAR4 -10517
FAR5 -10502
FAR1 -9560
FAR8 -8761
FAR7 4249
FAR3 9173


AMINO_ACID_METABOLISM_SYNTHESIS_CENTRAL_AMINO_ACID_METABOLISM_ASPARTATE_ASPARTATE_AMINOTRANSFERASE

AMINO_ACID_METABOLISM_SYNTHESIS_CENTRAL_AMINO_ACID_METABOLISM_ASPARTATE_ASPARTATE_AMINOTRANSFERASE
13
set AMINO_ACID_METABOLISM_SYNTHESIS_CENTRAL_AMINO_ACID_METABOLISM_ASPARTATE_ASPARTATE_AMINOTRANSFERASE
setSize 6
pANOVA 0.0893
s.dist 0.401
p.adjustANOVA 0.306



Top enriched genes

Top 20 genes
GeneID Gene Rank
PAT 10149
ASP4 10123
ASP5 8373
ASP3 3658
ASP2 -1810
ASP1 -4790

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
PAT 10149
ASP4 10123
ASP5 8373
ASP3 3658
ASP2 -1810
ASP1 -4790


PROTEIN_FOLDING

PROTEIN_FOLDING
217
set PROTEIN_FOLDING
setSize 64
pANOVA 4.3e-08
s.dist 0.396
p.adjustANOVA 6.4e-06



Top enriched genes

Top 20 genes
GeneID Gene Rank
FKBP20-1 10505
CPN20 9834
FKBP16-4 9793
LQY1 9679
TIG 9662
CPN60B3 9538
CPN60B2 9342
FKBP53 9293
CYP38 9269
MED37E 9235
FKBP17-1 9234
EMB1241 9003
PNSL4 8868
AT1G36390 8565
FKBP18 8256
FKBP17-3 7997
AR192 7991
AT2G24860 7980
FKBP16-3 7936
CCT6B 7909

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FKBP20-1 10505
CPN20 9834
FKBP16-4 9793
LQY1 9679
TIG 9662
CPN60B3 9538
CPN60B2 9342
FKBP53 9293
CYP38 9269
MED37E 9235
FKBP17-1 9234
EMB1241 9003
PNSL4 8868
AT1G36390 8565
FKBP18 8256
FKBP17-3 7997
AR192 7991
AT2G24860 7980
FKBP16-3 7936
CCT6B 7909
CPN60A2 7803
CCT7 7749
AT5G17840 7632
FKBP19 7327
AT2G24395 7271
AT3G06778 7010
FKBP17-2 6988
HSP60-2 6938
PSA2 6895
PFD3 6883
CPN10-2 6814
AT3G60370 6479
HSP60-3A 6472
FKBP12 6291
AT1G01230 6268
CCT4 6141
CPN10 4719
AT3G15120 4527
CPN60B4 4244
AT5G43260 3270
AT1G72420 3163
CCT8 3104
CCT2 2058
FKBP16-1 1438
CPN60 1095
CPN10-1 998
CCT6A 795
AT2G38000 793
ORLIKE 565
Mge1 326
ROF1 -171
CCT3 -637
FKBP42 -919
TFCA -1201
CCT1 -2236
PDF2 -2877
MED37D -3392
PFD6 -4200
ENA -4250
PFD1 -4970
FKBP43 -5315
TPR16 -5435
AT5G42000 -6124
FKBP15-3 -10003


CELL_DIVISION_PLASTID

CELL_DIVISION_PLASTID
24
set CELL_DIVISION_PLASTID
setSize 8
pANOVA 0.0529
s.dist 0.395
p.adjustANOVA 0.228



Top enriched genes

Top 20 genes
GeneID Gene Rank
MIND1 9454
GC1 9298
MINE1 7276
PDV1 6372
ARC3 6082
ALB4 1277
MSL3 -2893
MSL2 -3053

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
MIND1 9454
GC1 9298
MINE1 7276
PDV1 6372
ARC3 6082
ALB4 1277
MSL3 -2893
MSL2 -3053


MISC_GLUCO-,_GALACTO-_AND_MANNOSIDASES_ENDOGLUCANASE

MISC_GLUCO-,_GALACTO-_AND_MANNOSIDASES_ENDOGLUCANASE
140
set MISC_GLUCO-,_GALACTO-_AND_MANNOSIDASES_ENDOGLUCANASE
setSize 12
pANOVA 0.0187
s.dist 0.392
p.adjustANOVA 0.121



Top enriched genes

Top 20 genes
GeneID Gene Rank
AtGH9B13 10614
AtGH9B7 10436
AtGH9B18 9781
CEL1 9754
CEL2 9324
KOR3 7026
KOR2 3077
CEL3 2283
AtGH9C1 1680
AtGH9C3 -1426
AtGH9C2 -4706
AtGH9B12 -7552

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AtGH9B13 10614
AtGH9B7 10436
AtGH9B18 9781
CEL1 9754
CEL2 9324
KOR3 7026
KOR2 3077
CEL3 2283
AtGH9C1 1680
AtGH9C3 -1426
AtGH9C2 -4706
AtGH9B12 -7552


Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.0.3 (2020-10-10)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.2 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] parallel  stats4    stats     graphics  grDevices utils     datasets 
## [8] methods   base     
## 
## other attached packages:
##  [1] pkgload_1.2.0               GGally_2.1.1               
##  [3] ggplot2_3.3.3               beeswarm_0.3.1             
##  [5] gtools_3.8.2                tibble_3.1.0               
##  [7] dplyr_1.0.5                 echarts4r_0.4.0            
##  [9] vioplot_0.3.5               zoo_1.8-9                  
## [11] sm_2.2-5.6                  UpSetR_1.4.0               
## [13] eulerr_6.1.0                kableExtra_1.3.4           
## [15] mitch_1.2.2                 DESeq2_1.30.0              
## [17] SummarizedExperiment_1.20.0 Biobase_2.50.0             
## [19] MatrixGenerics_1.2.0        matrixStats_0.58.0         
## [21] GenomicRanges_1.42.0        GenomeInfoDb_1.26.0        
## [23] IRanges_2.24.0              S4Vectors_0.28.0           
## [25] BiocGenerics_0.36.0         gplots_3.1.1               
## [27] reshape2_1.4.4             
## 
## loaded via a namespace (and not attached):
##  [1] colorspace_2.0-0       ellipsis_0.3.1         rprojroot_2.0.2       
##  [4] XVector_0.30.0         rstudioapi_0.13        bit64_4.0.5           
##  [7] AnnotationDbi_1.52.0   fansi_0.4.2            xml2_1.3.2            
## [10] splines_4.0.3          cachem_1.0.4           geneplotter_1.68.0    
## [13] knitr_1.31             polyclip_1.10-0        jsonlite_1.7.2        
## [16] annotate_1.68.0        shiny_1.6.0            compiler_4.0.3        
## [19] httr_1.4.2             assertthat_0.2.1       Matrix_1.3-2          
## [22] fastmap_1.1.0          later_1.1.0.1          htmltools_0.5.1.1     
## [25] tools_4.0.3            gtable_0.3.0           glue_1.4.2            
## [28] GenomeInfoDbData_1.2.4 Rcpp_1.0.6             jquerylib_0.1.3       
## [31] vctrs_0.3.6            svglite_2.0.0          polylabelr_0.2.0      
## [34] xfun_0.22              stringr_1.4.0          testthat_3.0.2        
## [37] rvest_1.0.0            mime_0.10              lifecycle_1.0.0       
## [40] XML_3.99-0.6           zlibbioc_1.36.0        MASS_7.3-53.1         
## [43] scales_1.1.1           promises_1.2.0.1       RColorBrewer_1.1-2    
## [46] yaml_2.2.1             memoise_2.0.0          gridExtra_2.3         
## [49] sass_0.3.1             reshape_0.8.8          stringi_1.5.3         
## [52] RSQLite_2.2.4          highr_0.8              genefilter_1.72.0     
## [55] desc_1.3.0             caTools_1.18.1         BiocParallel_1.24.1   
## [58] rlang_0.4.10           pkgconfig_2.0.3        systemfonts_1.0.1     
## [61] bitops_1.0-6           evaluate_0.14          lattice_0.20-41       
## [64] purrr_0.3.4            htmlwidgets_1.5.3      bit_4.0.4             
## [67] tidyselect_1.1.0       plyr_1.8.6             magrittr_2.0.1        
## [70] R6_2.5.0               generics_0.1.0         DelayedArray_0.16.0   
## [73] DBI_1.1.1              withr_2.4.1            pillar_1.5.1          
## [76] survival_3.2-10        RCurl_1.98-1.3         crayon_1.4.1          
## [79] KernSmooth_2.23-18     utf8_1.2.1             rmarkdown_2.7         
## [82] locfit_1.5-9.4         grid_4.0.3             blob_1.2.1            
## [85] digest_0.6.27          webshot_0.5.2          xtable_1.8-4          
## [88] httpuv_1.5.5           munsell_0.5.0          viridisLite_0.3.0     
## [91] bslib_0.2.4            tcltk_4.0.3

END of report