date generated: 2021-03-25

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                       x
## 1MMP        -0.06943941
## 2-Cys        1.11074220
## 2A6          0.87763168
## 2MMP        -6.21455109
## 3AT1         0.03357734
## 3BETAHSD/D1  2.94991600
Here are some metrics about the input data profile:
Profile metrics
Profile metrics
num_genesets 959
num_genes_in_profile 21222
duplicated_genes_present 0
num_profile_genes_in_sets 20270
num_profile_genes_not_in_sets 952

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: ../baseline/ref/Ath_AGI_LOCUS_TAIR10_Aug2012.txt.gmt
Gene sets metrics
Gene sets metrics
num_genesets 959
num_genesets_excluded 694
num_genesets_included 265

Differential pathway expression


Interactive enrichment scatterplot

Significance is calculated by -log10(p-value). All points shown are FDR<0.05.

Significance is calculated by -log10(p-value). Top N sets shown irrespective of FDR.

Results table

Top N= 50 gene sets
set setSize pANOVA s.dist p.adjustANOVA
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT V 8 9.16e-05 0.799 1.45e-03
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE 9 7.49e-05 -0.762 1.23e-03
TRANSPORT SULPHATE 12 5.79e-06 -0.756 1.60e-04
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI 10 3.64e-05 0.754 7.00e-04
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE V 8 4.92e-04 0.711 6.04e-03
CELL WALL CELLULOSE SYNTHESIS 12 2.07e-05 0.710 4.56e-04
TRANSPORT P- AND V-ATPASES H+-TRANSPORTING TWO-SECTOR ATPASE 7 1.27e-03 -0.703 1.28e-02
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS CYT MDH 5 7.57e-03 -0.690 4.59e-02
PROTEIN SYNTHESIS RIBOSOMAL RNA 14 1.50e-05 -0.668 3.67e-04
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS WD-REPEAT PROTEINS 6 4.70e-03 0.666 3.48e-02
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY 16 4.31e-06 0.663 1.36e-04
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H4 8 1.23e-03 -0.660 1.26e-02
AMINO ACID METABOLISM MISC 5 1.36e-02 0.637 7.00e-02
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS DEXD-BOX HELICASES 14 4.26e-05 0.632 7.85e-04
NOT ASSIGNED NO ONTOLOGY PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN 5 1.47e-02 0.630 7.20e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE 10 5.64e-04 -0.630 6.55e-03
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES NUCLEOSIDE DIPHOSPHATE KINASE 5 1.87e-02 -0.607 8.44e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CCR1 5 2.31e-02 -0.587 9.11e-02
TRANSPORT AMMONIUM 7 7.39e-03 0.585 4.59e-02
PROTEIN DEGRADATION AUTOPHAGY 22 2.54e-06 -0.579 8.62e-05
MINOR CHO METABOLISM CALLOSE 14 1.83e-04 0.578 2.52e-03
HORMONE METABOLISM JASMONATE SYNTHESIS-DEGRADATION 12-OXO-PDA-REDUCTASE 5 2.64e-02 -0.573 9.80e-02
AMINO ACID METABOLISM SYNTHESIS BRANCHED CHAIN GROUP COMMON BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 1.53e-02 0.571 7.37e-02
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION BZR 6 1.58e-02 0.569 7.44e-02
STRESS BIOTIC RESPIRATORY BURST 8 5.61e-03 0.566 3.79e-02
NUCLEOTIDE METABOLISM SALVAGE PHOSPHORIBOSYLTRANSFERASES UPP 5 3.00e-02 0.561 1.07e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS BRIX 6 2.18e-02 0.541 8.83e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION 12 1.34e-03 -0.535 1.32e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CAD 7 1.44e-02 -0.534 7.20e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-1 9 5.66e-03 0.533 3.79e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 34 9.67e-08 -0.528 6.11e-06
NOT ASSIGNED NO ONTOLOGY LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN 6 2.51e-02 -0.528 9.55e-02
HORMONE METABOLISM CYTOKININ SIGNAL TRANSDUCTION 7 1.55e-02 0.528 7.39e-02
GLYCOLYSIS CYTOSOLIC BRANCH PHOSPHOGLYCERATE MUTASE 8 1.02e-02 -0.525 5.78e-02
SECONDARY METABOLISM FLAVONOIDS ISOFLAVONES ISOFLAVONE REDUCTASE 7 1.94e-02 -0.510 8.44e-02
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION BETA KETOACYL COA SYNTHASE 7 1.95e-02 -0.510 8.44e-02
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 1.99e-02 -0.508 8.55e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH COMPLEX I 7 2.03e-02 -0.507 8.55e-02
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 17 3.39e-04 0.502 4.41e-03
PS LIGHTREACTION OTHER ELECTRON CARRIER (OX/RED) FERREDOXIN 5 5.30e-02 -0.500 1.63e-01
RNA REGULATION OF TRANSCRIPTION NIN-LIKE BZIP-RELATED FAMILY 7 2.24e-02 0.498 8.92e-02
SIGNALLING RECEPTOR KINASES EXTENSIN 5 5.51e-02 0.495 1.68e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN 11 4.56e-03 -0.494 3.48e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS 4CL 7 2.46e-02 0.491 9.52e-02
SIGNALLING PHOSPHINOSITIDES PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 18 3.17e-04 0.490 4.24e-03
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VII 10 7.29e-03 0.490 4.59e-02
SIGNALLING PHOSPHINOSITIDES 16 7.13e-04 0.489 7.87e-03
TRANSPORT MAJOR INTRINSIC PROTEINS TIP 7 2.59e-02 -0.486 9.72e-02
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TYROSINE 7 2.78e-02 -0.480 1.01e-01
TCA / ORG TRANSFORMATION TCA IDH 5 6.45e-02 -0.477 1.81e-01


Results (complete table)


Click HERE to show results for all gene sets

Complete results
set setSize pANOVA s.dist p.adjustANOVA
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT V 8 9.16e-05 0.799000 1.45e-03
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE 9 7.49e-05 -0.762000 1.23e-03
TRANSPORT SULPHATE 12 5.79e-06 -0.756000 1.60e-04
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI 10 3.64e-05 0.754000 7.00e-04
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE V 8 4.92e-04 0.711000 6.04e-03
CELL WALL CELLULOSE SYNTHESIS 12 2.07e-05 0.710000 4.56e-04
TRANSPORT P- AND V-ATPASES H+-TRANSPORTING TWO-SECTOR ATPASE 7 1.27e-03 -0.703000 1.28e-02
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS CYT MDH 5 7.57e-03 -0.690000 4.59e-02
PROTEIN SYNTHESIS RIBOSOMAL RNA 14 1.50e-05 -0.668000 3.67e-04
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS WD-REPEAT PROTEINS 6 4.70e-03 0.666000 3.48e-02
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY 16 4.31e-06 0.663000 1.36e-04
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H4 8 1.23e-03 -0.660000 1.26e-02
AMINO ACID METABOLISM MISC 5 1.36e-02 0.637000 7.00e-02
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS DEXD-BOX HELICASES 14 4.26e-05 0.632000 7.85e-04
NOT ASSIGNED NO ONTOLOGY PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN 5 1.47e-02 0.630000 7.20e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE 10 5.64e-04 -0.630000 6.55e-03
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES NUCLEOSIDE DIPHOSPHATE KINASE 5 1.87e-02 -0.607000 8.44e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CCR1 5 2.31e-02 -0.587000 9.11e-02
TRANSPORT AMMONIUM 7 7.39e-03 0.585000 4.59e-02
PROTEIN DEGRADATION AUTOPHAGY 22 2.54e-06 -0.579000 8.62e-05
MINOR CHO METABOLISM CALLOSE 14 1.83e-04 0.578000 2.52e-03
HORMONE METABOLISM JASMONATE SYNTHESIS-DEGRADATION 12-OXO-PDA-REDUCTASE 5 2.64e-02 -0.573000 9.80e-02
AMINO ACID METABOLISM SYNTHESIS BRANCHED CHAIN GROUP COMMON BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 6 1.53e-02 0.571000 7.37e-02
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION BZR 6 1.58e-02 0.569000 7.44e-02
STRESS BIOTIC RESPIRATORY BURST 8 5.61e-03 0.566000 3.79e-02
NUCLEOTIDE METABOLISM SALVAGE PHOSPHORIBOSYLTRANSFERASES UPP 5 3.00e-02 0.561000 1.07e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS BRIX 6 2.18e-02 0.541000 8.83e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION 12 1.34e-03 -0.535000 1.32e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CAD 7 1.44e-02 -0.534000 7.20e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-1 9 5.66e-03 0.533000 3.79e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR 34 9.67e-08 -0.528000 6.11e-06
NOT ASSIGNED NO ONTOLOGY LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN 6 2.51e-02 -0.528000 9.55e-02
HORMONE METABOLISM CYTOKININ SIGNAL TRANSDUCTION 7 1.55e-02 0.528000 7.39e-02
GLYCOLYSIS CYTOSOLIC BRANCH PHOSPHOGLYCERATE MUTASE 8 1.02e-02 -0.525000 5.78e-02
SECONDARY METABOLISM FLAVONOIDS ISOFLAVONES ISOFLAVONE REDUCTASE 7 1.94e-02 -0.510000 8.44e-02
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION BETA KETOACYL COA SYNTHASE 7 1.95e-02 -0.510000 8.44e-02
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 1.99e-02 -0.508000 8.55e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH COMPLEX I 7 2.03e-02 -0.507000 8.55e-02
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 17 3.39e-04 0.502000 4.41e-03
PS LIGHTREACTION OTHER ELECTRON CARRIER (OX/RED) FERREDOXIN 5 5.30e-02 -0.500000 1.63e-01
RNA REGULATION OF TRANSCRIPTION NIN-LIKE BZIP-RELATED FAMILY 7 2.24e-02 0.498000 8.92e-02
SIGNALLING RECEPTOR KINASES EXTENSIN 5 5.51e-02 0.495000 1.68e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN 11 4.56e-03 -0.494000 3.48e-02
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS 4CL 7 2.46e-02 0.491000 9.52e-02
SIGNALLING PHOSPHINOSITIDES PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 18 3.17e-04 0.490000 4.24e-03
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VII 10 7.29e-03 0.490000 4.59e-02
SIGNALLING PHOSPHINOSITIDES 16 7.13e-04 0.489000 7.87e-03
TRANSPORT MAJOR INTRINSIC PROTEINS TIP 7 2.59e-02 -0.486000 9.72e-02
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TYROSINE 7 2.78e-02 -0.480000 1.01e-01
TCA / ORG TRANSFORMATION TCA IDH 5 6.45e-02 -0.477000 1.81e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III 40 1.81e-07 0.477000 1.00e-05
PROTEIN ASSEMBLY AND COFACTOR LIGATION 22 1.51e-04 -0.467000 2.15e-03
PROTEIN DEGRADATION UBIQUITIN E2 38 7.27e-07 -0.464000 3.21e-05
NOT ASSIGNED NO ONTOLOGY PUMILIO/PUF RNA-BINDING DOMAIN-CONTAINING PROTEIN 9 1.64e-02 0.462000 7.64e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I 19 5.34e-04 0.459000 6.38e-03
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI 14 3.17e-03 0.455000 2.55e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XIII 7 3.76e-02 0.454000 1.24e-01
HORMONE METABOLISM ETHYLENE SIGNAL TRANSDUCTION 32 9.03e-06 -0.453000 2.35e-04
RNA REGULATION OF TRANSCRIPTION CPP(ZN),CPP1-RELATED TRANSCRIPTION FACTOR FAMILY 7 3.92e-02 0.450000 1.28e-01
RNA REGULATION OF TRANSCRIPTION BROMODOMAIN PROTEINS 8 2.81e-02 0.448000 1.02e-01
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS 10 1.48e-02 -0.445000 7.20e-02
DEVELOPMENT SQUAMOSA PROMOTER BINDING LIKE (SPL) 14 4.12e-03 0.443000 3.19e-02
NOT ASSIGNED NO ONTOLOGY BSD DOMAIN-CONTAINING PROTEIN 7 4.25e-02 -0.443000 1.37e-01
CO-FACTOR AND VITAMINE METABOLISM IRON-SULPHUR CLUSTERS 7 4.31e-02 -0.442000 1.37e-01
TRANSPORT MAJOR INTRINSIC PROTEINS PIP 13 5.99e-03 -0.440000 3.95e-02
RNA REGULATION OF TRANSCRIPTION DNA METHYLTRANSFERASES 8 3.14e-02 0.439000 1.08e-01
N-METABOLISM AMMONIA METABOLISM GLUTAMINE SYNTHETASE 6 6.33e-02 0.438000 1.80e-01
BIODEGRADATION OF XENOBIOTICS HYDROXYACYLGLUTATHIONE HYDROLASE 5 9.03e-02 -0.437000 2.26e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL-COA THIOESTERASE 6 6.36e-02 -0.437000 1.80e-01
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ACYL COA DH 7 4.63e-02 -0.435000 1.46e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT II 13 6.70e-03 0.434000 4.36e-02
SIGNALLING RECEPTOR KINASES PROLINE EXTENSIN LIKE 16 2.88e-03 0.430000 2.36e-02
STRESS ABIOTIC LIGHT 6 6.96e-02 0.428000 1.91e-01
SECONDARY METABOLISM N MISC ALKALOID-LIKE 17 2.54e-03 -0.423000 2.16e-02
PS LIGHTREACTION NADH DH 10 2.22e-02 -0.418000 8.90e-02
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN 107 9.23e-14 0.417000 2.04e-11
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS 56 7.72e-08 -0.415000 6.11e-06
RNA REGULATION OF TRANSCRIPTION SNF7 12 1.46e-02 -0.407000 7.20e-02
PROTEIN DEGRADATION UBIQUITIN E3 HECT 7 6.46e-02 0.403000 1.81e-01
RNA REGULATION OF TRANSCRIPTION PHOR1 11 2.07e-02 -0.403000 8.61e-02
CELL CELL DEATH PLANTS 5 1.23e-01 -0.398000 2.80e-01
RNA REGULATION OF TRANSCRIPTION CHROMATIN REMODELING FACTORS 35 5.23e-05 0.395000 9.25e-04
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C 14 1.05e-02 -0.395000 5.85e-02
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN PROTEASE 20 2.24e-03 0.395000 2.02e-02
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE 22 1.38e-03 0.394000 1.32e-02
RNA REGULATION OF TRANSCRIPTION PHD FINGER TRANSCRIPTION FACTOR 10 3.11e-02 0.394000 1.08e-01
CO-FACTOR AND VITAMINE METABOLISM MOLYBDENUM COFACTOR 5 1.30e-01 -0.391000 2.91e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA CHORISMATE SHIKIMATE KINASE 5 1.30e-01 -0.391000 2.91e-01
MISC ACYL TRANSFERASES 8 6.27e-02 0.380000 1.80e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACP DESATURASE 7 8.22e-02 0.379000 2.12e-01
RNA REGULATION OF TRANSCRIPTION E2F/DP TRANSCRIPTION FACTOR FAMILY 8 6.34e-02 0.379000 1.80e-01
LIPID METABOLISM LIPID TRANSFER PROTEINS ETC 13 2.10e-02 -0.370000 8.64e-02
NOT ASSIGNED NO ONTOLOGY ABC1 FAMILY PROTEIN 11 3.41e-02 0.369000 1.16e-01
PROTEIN TARGETING NUCLEUS 43 2.95e-05 0.368000 5.93e-04
TRANSPORT PORINS 5 1.54e-01 0.368000 3.25e-01
CELL WALL CELL WALL PROTEINS AGPS AGP 39 7.29e-05 0.367000 1.23e-03
HORMONE METABOLISM ABSCISIC ACID INDUCED-REGULATED-RESPONSIVE-ACTIVATED 23 2.34e-03 -0.367000 2.06e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2 14 1.91e-02 0.362000 8.44e-02
RNA REGULATION OF TRANSCRIPTION HISTONE ACETYLTRANSFERASES 16 1.24e-02 0.361000 6.45e-02
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACP PROTEIN 7 9.99e-02 -0.359000 2.43e-01
STRESS ABIOTIC COLD 18 8.41e-03 -0.359000 4.89e-02
FERMENTATION PDC 5 1.69e-01 -0.355000 3.44e-01
CELL WALL PRECURSOR SYNTHESIS UGE 5 1.73e-01 -0.352000 3.48e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES CARBOXYLESTERASE 8 8.69e-02 -0.350000 2.19e-01
AMINO ACID METABOLISM DEGRADATION BRANCHED CHAIN GROUP SHARED 7 1.13e-01 -0.346000 2.61e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE 22 4.98e-03 0.346000 3.50e-02
TRANSPORT UNSPECIFIED ANIONS 14 2.56e-02 0.345000 9.68e-02
RNA REGULATION OF TRANSCRIPTION ZN-FINGER(CCHC) 10 5.97e-02 0.344000 1.76e-01
SECONDARY METABOLISM SIMPLE PHENOLS 16 1.92e-02 0.338000 8.44e-02
STRESS ABIOTIC UNSPECIFIED 84 8.59e-08 -0.338000 6.11e-06
MISC GLUTATHIONE S TRANSFERASES 52 2.55e-05 -0.337000 5.37e-04
RNA REGULATION OF TRANSCRIPTION POLYCOMB GROUP (PCG) 7 1.24e-01 0.336000 2.80e-01
CO-FACTOR AND VITAMINE METABOLISM 15 2.48e-02 -0.335000 9.55e-02
DNA SYNTHESIS/CHROMATIN STRUCTURE 203 2.11e-16 0.334000 9.32e-14
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION BRI 6 1.56e-01 0.334000 3.28e-01
PROTEIN TARGETING UNKNOWN 9 8.31e-02 -0.334000 2.12e-01
HORMONE METABOLISM SALICYLIC ACID SYNTHESIS-DEGRADATION 8 1.03e-01 -0.333000 2.49e-01
DEVELOPMENT LATE EMBRYOGENESIS ABUNDANT 19 1.21e-02 -0.332000 6.38e-02
RNA REGULATION OF TRANSCRIPTION TCP TRANSCRIPTION FACTOR FAMILY 14 3.18e-02 0.331000 1.09e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA PHENYLALANINE AROGENATE DEHYDRATASE / PREPHENATE DEHYDRATASE 6 1.63e-01 -0.329000 3.38e-01
PROTEIN TARGETING SECRETORY PATHWAY GOLGI 17 1.92e-02 0.328000 8.44e-02
LIPID METABOLISM EXOTICS(STEROIDS, SQUALENE ETC) 17 1.94e-02 -0.328000 8.44e-02
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H3 6 1.66e-01 -0.327000 3.41e-01
MAJOR CHO METABOLISM SYNTHESIS STARCH AGPASE 8 1.13e-01 0.324000 2.61e-01
REDOX ASCORBATE AND GLUTATHIONE 23 7.25e-03 -0.323000 4.59e-02
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP3 7 1.44e-01 -0.319000 3.11e-01
PROTEIN DEGRADATION CYSTEINE PROTEASE 48 1.32e-04 -0.319000 2.01e-03
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE 21 1.15e-02 -0.319000 6.10e-02
LIPID METABOLISM LIPID DEGRADATION BETA-OXIDATION ENOYL COA HYDRATASE 9 9.78e-02 -0.319000 2.39e-01
SECONDARY METABOLISM ISOPRENOIDS NON-MEVALONATE PATHWAY 7 1.49e-01 -0.315000 3.20e-01
REDOX DISMUTASES AND CATALASES 11 7.32e-02 -0.312000 1.98e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2B 8 1.28e-01 -0.311000 2.89e-01
MISC DYNAMIN 9 1.07e-01 0.310000 2.57e-01
CELL CYCLE 86 9.05e-07 0.306000 3.33e-05
RNA PROCESSING RNA HELICASE 33 2.41e-03 0.305000 2.09e-02
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE 16 3.58e-02 0.303000 1.19e-01
SIGNALLING RECEPTOR KINASES LEGUME-LECTIN 15 4.87e-02 -0.294000 1.52e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES BETA-GALACTOSIDASE 13 6.83e-02 0.292000 1.89e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN 26 1.08e-02 -0.289000 5.87e-02
NOT ASSIGNED NO ONTOLOGY EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN 18 3.50e-02 0.287000 1.17e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS EXPORT FROM NUCLEUS 7 1.90e-01 0.286000 3.76e-01
PROTEIN DEGRADATION UBIQUITIN PROTEASOM 59 1.44e-04 -0.286000 2.13e-03
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP5 10 1.18e-01 -0.285000 2.70e-01
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY 38 2.60e-03 0.282000 2.17e-02
PS CALVIN CYCLE RUBISCO INTERACTING 6 2.38e-01 0.278000 4.31e-01
HORMONE METABOLISM BRASSINOSTEROID SYNTHESIS-DEGRADATION STEROLS OTHER 8 1.77e-01 -0.276000 3.54e-01
CELL WALL CELL WALL PROTEINS LRR 18 4.31e-02 0.275000 1.37e-01
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS 34 5.58e-03 -0.275000 3.79e-02
HORMONE METABOLISM JASMONATE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 13 9.06e-02 -0.271000 2.26e-01
PROTEIN TARGETING SECRETORY PATHWAY ER 14 7.95e-02 -0.271000 2.08e-01
MISC SHORT CHAIN DEHYDROGENASE/REDUCTASE (SDR) 45 1.70e-03 -0.270000 1.59e-02
HORMONE METABOLISM GIBBERELIN SYNTHESIS-DEGRADATION 7 2.16e-01 0.270000 4.12e-01
RNA REGULATION OF TRANSCRIPTION JUMONJI FAMILY 13 9.26e-02 0.269000 2.27e-01
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY 19 4.27e-02 0.269000 1.37e-01
RNA REGULATION OF TRANSCRIPTION FHA TRANSCRIPTION FACTOR 7 2.20e-01 0.268000 4.14e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL-COA BINDING PROTEIN 6 2.61e-01 -0.265000 4.54e-01
AMINO ACID METABOLISM SYNTHESIS ASPARTATE FAMILY METHIONINE HOMOCYSTEINE S-METHYLTRANSFERASE 8 1.95e-01 -0.265000 3.80e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES 10 1.52e-01 -0.262000 3.22e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL COA LIGASE 18 5.54e-02 -0.261000 1.68e-01
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR 145 6.87e-08 0.259000 6.11e-06
TRANSPORT NITRATE 11 1.38e-01 0.258000 3.01e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES TRIACYLGLYCEROL LIPASE 27 2.03e-02 -0.258000 8.55e-02
MISC RHODANESE 7 2.42e-01 -0.256000 4.34e-01
RNA REGULATION OF TRANSCRIPTION NAC DOMAIN TRANSCRIPTION FACTOR FAMILY 16 7.83e-02 -0.254000 2.07e-01
HORMONE METABOLISM ABSCISIC ACID SYNTHESIS-DEGRADATION 10 1.65e-01 -0.254000 3.40e-01
NOT ASSIGNED NO ONTOLOGY SPECKLE-TYPE POZ PROTEIN-RELATED 5 3.28e-01 -0.253000 5.39e-01
SECONDARY METABOLISM WAX 16 8.01e-02 -0.253000 2.08e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE INVERTASES NEUTRAL 8 2.22e-01 -0.250000 4.15e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE X 8 2.24e-01 0.248000 4.15e-01
TCA / ORG TRANSFORMATION TCA SUCCINATE DEHYDROGENASE 6 2.93e-01 -0.248000 4.95e-01
BIODEGRADATION OF XENOBIOTICS 8 2.27e-01 -0.247000 4.18e-01
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR) 27 2.72e-02 0.246000 1.00e-01
REDOX THIOREDOXIN 48 3.24e-03 -0.246000 2.56e-02
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) GATA TRANSCRIPTION FACTOR FAMILY 25 3.44e-02 0.244000 1.16e-01
DNA REPAIR 74 3.58e-04 0.240000 4.52e-03
RNA REGULATION OF TRANSCRIPTION SIGMA LIKE PLANT 5 3.54e-01 0.240000 5.62e-01
MISC MYROSINASES-LECTIN-JACALIN 47 4.81e-03 -0.238000 3.48e-02
REDOX ASCORBATE AND GLUTATHIONE GLUTATHIONE 13 1.42e-01 -0.235000 3.09e-01
STRESS ABIOTIC 22 5.69e-02 -0.234000 1.71e-01
HORMONE METABOLISM AUXIN SIGNAL TRANSDUCTION 22 6.01e-02 0.232000 1.76e-01
CELL WALL DEGRADATION MANNAN-XYLOSE-ARABINOSE-FUCOSE 16 1.10e-01 -0.231000 2.61e-01
SECONDARY METABOLISM ISOPRENOIDS NON-MEVALONATE PATHWAY GERANYLGERANYL PYROPHOSPHATE SYNTHASE 9 2.31e-01 -0.231000 4.21e-01
CELL WALL HEMICELLULOSE SYNTHESIS 14 1.35e-01 0.231000 2.97e-01
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) SPHINGOLIPIDS 20 7.44e-02 0.230000 1.99e-01
RNA REGULATION OF TRANSCRIPTION ARR 16 1.11e-01 0.230000 2.61e-01
RNA REGULATION OF TRANSCRIPTION SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY 33 2.37e-02 0.228000 9.27e-02
HORMONE METABOLISM ETHYLENE INDUCED-REGULATED-RESPONSIVE-ACTIVATED 23 6.10e-02 -0.226000 1.77e-01
NOT ASSIGNED NO ONTOLOGY AGENET DOMAIN-CONTAINING PROTEIN 15 1.32e-01 0.225000 2.92e-01
RNA REGULATION OF TRANSCRIPTION ALFIN-LIKE 7 3.04e-01 -0.224000 5.07e-01
CELL WALL CELLULOSE SYNTHESIS CELLULOSE SYNTHASE 23 6.81e-02 0.220000 1.89e-01
PROTEIN AA ACTIVATION 9 2.54e-01 0.220000 4.50e-01
CELL WALL HEMICELLULOSE SYNTHESIS GLUCURONOXYLAN 9 2.57e-01 0.218000 4.51e-01
DEVELOPMENT STORAGE PROTEINS 20 9.24e-02 -0.217000 2.27e-01
METAL HANDLING BINDING, CHELATION AND STORAGE 47 1.06e-02 -0.216000 5.85e-02
TRANSPORT NUCLEOTIDES 19 1.11e-01 -0.211000 2.61e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE HEXOKINASE 5 4.13e-01 0.211000 6.32e-01
RNA REGULATION OF TRANSCRIPTION ABI3/VP1-RELATED B3-DOMAIN-CONTAINING TRANSCRIPTION FACTOR FAMILY 8 3.06e-01 0.209000 5.08e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES 16 1.48e-01 0.209000 3.20e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNPS 14 1.78e-01 0.208000 3.54e-01
STRESS BIOTIC 143 1.81e-05 -0.208000 4.22e-04
OPP OXIDATIVE PP 6-PHOSPHOGLUCONATE DEHYDROGENASE 7 3.42e-01 -0.208000 5.57e-01
CELL ORGANISATION 343 3.97e-11 0.207000 5.85e-09
SIGNALLING LIGHT 86 8.97e-04 0.207000 9.67e-03
RNA REGULATION OF TRANSCRIPTION PWWP DOMAIN PROTEIN 11 2.36e-01 0.206000 4.30e-01
CELL DIVISION 94 5.90e-04 0.205000 6.68e-03
RNA REGULATION OF TRANSCRIPTION WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY 64 4.96e-03 -0.203000 3.50e-02
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES 59 7.84e-03 0.200000 4.68e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE 26 7.98e-02 -0.198000 2.08e-01
MISC ACID AND OTHER PHOSPHATASES 60 8.05e-03 -0.198000 4.74e-02
TRANSPORT METAL 68 4.81e-03 -0.198000 3.48e-02
MISC GLUCO-, GALACTO- AND MANNOSIDASES ENDOGLUCANASE 13 2.20e-01 0.196000 4.14e-01
RNA PROCESSING SPLICING 58 9.69e-03 0.196000 5.56e-02
MISC O-METHYL TRANSFERASES 18 1.50e-01 0.196000 3.20e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS DIACYLGLYCEROL KINASE 6 4.06e-01 0.196000 6.23e-01
DNA UNSPECIFIED 85 1.82e-03 0.196000 1.67e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT X 12 2.48e-01 -0.193000 4.42e-01
PROTEIN SYNTHESIS RELEASE 10 2.93e-01 -0.192000 4.95e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII 42 3.13e-02 -0.192000 1.08e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE IX 14 2.15e-01 0.191000 4.12e-01
NOT ASSIGNED NO ONTOLOGY HYDROXYPROLINE RICH PROTEINS 55 1.43e-02 0.191000 7.20e-02
REDOX GLUTAREDOXINS 30 7.38e-02 -0.189000 1.99e-01
REDOX THIOREDOXIN PDIL 13 2.45e-01 0.186000 4.38e-01
STRESS BIOTIC SIGNALLING 12 2.64e-01 -0.186000 4.58e-01
MINOR CHO METABOLISM TREHALOSE POTENTIAL TPS/TPP 7 3.94e-01 -0.186000 6.11e-01
NOT ASSIGNED NO ONTOLOGY TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN 7 3.96e-01 0.185000 6.11e-01
OPP OXIDATIVE PP G6PD 6 4.56e-01 0.176000 6.81e-01
HORMONE METABOLISM CYTOKININ SYNTHESIS-DEGRADATION 14 2.55e-01 0.176000 4.50e-01
STRESS BIOTIC SIGNALLING MLO-LIKE 11 3.14e-01 0.175000 5.18e-01
REDOX ASCORBATE AND GLUTATHIONE ASCORBATE 17 2.17e-01 -0.173000 4.12e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L34 10 3.44e-01 -0.173000 5.57e-01
RNA REGULATION OF TRANSCRIPTION GEBP LIKE 10 3.45e-01 -0.173000 5.57e-01
MISC ALCOHOL DEHYDROGENASES 8 4.00e-01 -0.172000 6.17e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES 42 5.88e-02 -0.169000 1.74e-01
RNA REGULATION OF TRANSCRIPTION BBR/BPC 7 4.40e-01 0.168000 6.64e-01
MISC GCN5-RELATED N-ACETYLTRANSFERASE 23 1.63e-01 -0.168000 3.38e-01
HORMONE METABOLISM ABSCISIC ACID SIGNAL TRANSDUCTION 10 3.61e-01 -0.167000 5.71e-01
PS LIGHTREACTION PHOTOSYSTEM II LHC-II 14 2.82e-01 0.166000 4.80e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX 257 4.87e-06 -0.166000 1.43e-04
HORMONE METABOLISM JASMONATE SYNTHESIS-DEGRADATION LIPOXYGENASE 6 4.86e-01 -0.164000 7.19e-01
RNA REGULATION OF TRANSCRIPTION AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY 89 7.59e-03 -0.164000 4.59e-02
TCA / ORG TRANSFORMATION CARBONIC ANHYDRASES 11 3.48e-01 -0.163000 5.59e-01
RNA REGULATION OF TRANSCRIPTION GLOBAL TRANSCRIPTION FACTOR GROUP 14 2.98e-01 0.161000 5.01e-01
REDOX MISC 6 4.97e-01 -0.160000 7.28e-01
CELL DIVISION PLASTID 8 4.34e-01 0.160000 6.58e-01
PS PHOTORESPIRATION GLYCOLATE OXYDASE 5 5.46e-01 -0.156000 7.71e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS 11 3.72e-01 0.156000 5.85e-01
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN 26 1.71e-01 -0.155000 3.45e-01
AMINO ACID METABOLISM DEGRADATION GLUTAMATE FAMILY ARGININE 6 5.21e-01 0.151000 7.57e-01
MISC BETA 1,3 GLUCAN HYDROLASES 19 2.55e-01 0.151000 4.50e-01
PS LIGHTREACTION PHOTOSYSTEM I LHC-I 6 5.25e-01 0.150000 7.58e-01
RNA PROCESSING RIBONUCLEASES 49 7.14e-02 0.149000 1.95e-01
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 419 2.10e-07 0.148000 1.03e-05
RNA REGULATION OF TRANSCRIPTION C2H2 ZINC FINGER FAMILY 99 1.11e-02 0.148000 5.97e-02
PROTEIN TARGETING MITOCHONDRIA 32 1.51e-01 -0.147000 3.21e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XII 9 4.47e-01 -0.146000 6.69e-01
MISC MISC2 27 1.91e-01 -0.146000 3.76e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP2 10 4.28e-01 0.145000 6.50e-01
LIPID METABOLISM FA DESATURATION DESATURASE 6 5.41e-01 -0.144000 7.68e-01
SECONDARY METABOLISM ISOPRENOIDS TERPENOIDS 25 2.14e-01 0.144000 4.12e-01
AMINO ACID METABOLISM DEGRADATION SERINE-GLYCINE-CYSTEINE GROUP GLYCINE 5 5.82e-01 -0.142000 8.02e-01
PROTEIN GLYCOSYLATION 27 2.02e-01 0.142000 3.94e-01
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) PHOSPHATIDYLCHOLINESTEROL O-ACYLTRANSFERASE 5 5.87e-01 -0.140000 8.02e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS PHOSPHATIDATE CYTIDYLYLTRANSFERASE 7 5.28e-01 0.138000 7.59e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT UNKNOWN 5 5.98e-01 0.136000 8.06e-01
AMINO ACID METABOLISM SYNTHESIS SERINE-GLYCINE-CYSTEINE GROUP CYSTEINE OASTL 9 4.83e-01 -0.135000 7.17e-01
PROTEIN SYNTHESIS ELONGATION 29 2.11e-01 -0.134000 4.09e-01
HORMONE METABOLISM AUXIN SYNTHESIS-DEGRADATION 12 4.21e-01 -0.134000 6.42e-01
STRESS ABIOTIC DROUGHT/SALT 67 5.81e-02 0.134000 1.73e-01
TRANSPORT NDP-SUGARS AT THE ER 7 5.54e-01 0.129000 7.80e-01
NOT ASSIGNED NO ONTOLOGY C2 DOMAIN-CONTAINING PROTEIN 38 1.70e-01 0.129000 3.44e-01
RNA REGULATION OF TRANSCRIPTION AUX/IAA FAMILY 25 2.69e-01 -0.128000 4.62e-01
CELL WALL PRECURSOR SYNTHESIS UXS 6 5.88e-01 -0.128000 8.02e-01
PROTEIN AA ACTIVATION ASPARAGINE-TRNA LIGASE 5 6.21e-01 -0.128000 8.08e-01
RNA REGULATION OF TRANSCRIPTION ORPHAN FAMILY 9 5.10e-01 0.127000 7.44e-01
TRANSPORT MAJOR INTRINSIC PROTEINS NIP 6 5.96e-01 -0.125000 8.06e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE 31 2.30e-01 -0.125000 4.21e-01
PROTEIN DEGRADATION UBIQUITIN 56 1.13e-01 0.122000 2.61e-01
MINOR CHO METABOLISM OTHERS 38 1.92e-01 -0.122000 3.78e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES URIDYLATE KINASE 5 6.37e-01 -0.122000 8.19e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS MISC 9 5.29e-01 0.121000 7.59e-01
SIGNALLING MISC 17 3.91e-01 -0.120000 6.11e-01
MISC CALCINEURIN-LIKE PHOSPHOESTERASE FAMILY PROTEIN 7 5.83e-01 0.120000 8.02e-01
SIGNALLING RECEPTOR KINASES MISC 75 8.23e-02 0.116000 2.12e-01
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION 30 2.73e-01 0.116000 4.66e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES PHOSPHOLIPASE D 12 4.92e-01 0.115000 7.22e-01
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP 38 2.23e-01 0.114000 4.15e-01
REDOX HEME 5 6.59e-01 0.114000 8.35e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN ANTHRANILATE SYNTHASE 5 6.60e-01 0.114000 8.35e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2A 13 4.80e-01 -0.113000 7.14e-01
TRANSPORT CALCIUM 21 3.71e-01 -0.113000 5.85e-01
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY 39 2.24e-01 0.113000 4.15e-01
HORMONE METABOLISM GIBBERELIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 10 5.38e-01 0.113000 7.68e-01
PROTEIN TARGETING PEROXISOMES 10 5.41e-01 -0.112000 7.68e-01
MISC BETA 1,3 GLUCAN HYDROLASES GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 24 3.51e-01 0.110000 5.62e-01
HORMONE METABOLISM BRASSINOSTEROID SIGNAL TRANSDUCTION OTHER 5 6.75e-01 0.108000 8.44e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) DOF ZINC FINGER FAMILY 31 3.00e-01 -0.108000 5.02e-01
PROTEIN DEGRADATION AAA TYPE 35 2.71e-01 -0.108000 4.64e-01
SECONDARY METABOLISM PHENYLPROPANOIDS 36 2.68e-01 -0.107000 4.62e-01
NUCLEOTIDE METABOLISM DEGRADATION 26 3.52e-01 0.105000 5.62e-01
CELL WALL DEGRADATION CELLULASES AND BETA -1,4-GLUCANASES 9 5.86e-01 0.105000 8.02e-01
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS 8 6.11e-01 0.104000 8.08e-01
HORMONE METABOLISM GIBBERELIN SIGNAL TRANSDUCTION 8 6.13e-01 -0.103000 8.08e-01
NUCLEOTIDE METABOLISM SALVAGE NUDIX HYDROLASES 23 3.93e-01 -0.103000 6.11e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 11 5.56e-01 0.103000 7.80e-01
SECONDARY METABOLISM FLAVONOIDS CHALCONES 7 6.42e-01 0.102000 8.22e-01
METAL HANDLING ACQUISITION 8 6.21e-01 -0.101000 8.08e-01
PROTEIN DEGRADATION UBIQUITIN E3 RING 371 9.34e-04 -0.100000 9.83e-03
NUCLEOTIDE METABOLISM SYNTHESIS PRS-PP 5 7.00e-01 -0.099400 8.62e-01
SIGNALLING RECEPTOR KINASES DUF 26 32 3.35e-01 -0.098400 5.49e-01
GLYCOLYSIS CYTOSOLIC BRANCH PYRUVATE KINASE (PK) 5 7.08e-01 -0.096700 8.62e-01
RNA REGULATION OF TRANSCRIPTION BHLH,BASIC HELIX-LOOP-HELIX FAMILY 112 7.82e-02 0.096400 2.07e-01
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES 154 4.73e-02 0.092600 1.48e-01
RNA REGULATION OF TRANSCRIPTION 13 5.66e-01 0.091900 7.87e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE MITOCHONDRIAL MEMBRANE 62 2.15e-01 -0.091000 4.12e-01
TRANSPORT AMINO ACIDS 57 2.39e-01 -0.090200 4.31e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN UNKNOWN UNKNOWN 5 7.30e-01 -0.089200 8.77e-01
SIGNALLING LIPIDS 6 7.06e-01 -0.088900 8.62e-01
MICRO RNA, NATURAL ANTISENSE ETC 199 3.07e-02 0.088800 1.08e-01
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE 20 4.92e-01 -0.088800 7.22e-01
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS FLAVONOL SYNTHASE (FLS) 5 7.31e-01 0.088700 8.77e-01
SIGNALLING CALCIUM 203 3.01e-02 0.088300 1.07e-01
RNA RNA BINDING 165 5.06e-02 0.088200 1.56e-01
SIGNALLING LIGHT COP9 SIGNALOSOME 12 5.98e-01 -0.087900 8.06e-01
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS MALIC 6 7.10e-01 0.087600 8.63e-01
RNA REGULATION OF TRANSCRIPTION PSUDO ARR TRANSCRIPTION FACTOR FAMILY 7 6.99e-01 0.084400 8.62e-01
SECONDARY METABOLISM ISOPRENOIDS 7 7.01e-01 -0.083700 8.62e-01
CELL WALL PRECURSOR SYNTHESIS GAE 6 7.23e-01 0.083600 8.73e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9 6.65e-01 -0.083500 8.37e-01
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS 13 6.07e-01 0.082400 8.08e-01
TRANSPORT MISC 114 1.32e-01 -0.081800 2.92e-01
SIGNALLING PHOSPHINOSITIDES PHOSPHOINOSITIDE PHOSPHOLIPASE C 9 6.76e-01 0.080500 8.44e-01
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1 15 5.90e-01 0.080400 8.02e-01
NOT ASSIGNED NO ONTOLOGY BTB/POZ DOMAIN-CONTAINING PROTEIN 5 7.57e-01 -0.079800 8.90e-01
TRANSPORT ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS 105 1.70e-01 0.077500 3.44e-01
MISC CYTOCHROME P450 159 9.17e-02 -0.077500 2.27e-01
MISC OXYGENASES 5 7.65e-01 -0.077200 8.92e-01
STRESS BIOTIC PR-PROTEINS 169 8.69e-02 0.076300 2.19e-01
CELL VESICLE TRANSPORT 156 1.10e-01 0.074100 2.61e-01
PROTEIN DEGRADATION METALLOPROTEASE 36 4.43e-01 -0.073900 6.66e-01
STRESS 7 7.37e-01 -0.073400 8.77e-01
RNA TRANSCRIPTION 82 2.58e-01 0.072300 4.51e-01
RNA REGULATION OF TRANSCRIPTION HB,HOMEOBOX TRANSCRIPTION FACTOR FAMILY 67 3.07e-01 0.072200 5.08e-01
STRESS BIOTIC REGULATION OF TRANSCRIPTION 6 7.61e-01 0.071700 8.92e-01
TRANSPORT SUGARS 58 3.45e-01 -0.071600 5.57e-01
SECONDARY METABOLISM PHENYLPROPANOIDS LIGNIN BIOSYNTHESIS CCOAOMT 6 7.63e-01 -0.071200 8.92e-01
MISC PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN 51 3.80e-01 -0.071000 5.96e-01
STRESS BIOTIC RECEPTORS 17 6.21e-01 0.069300 8.08e-01
SIGNALLING PHOSPHORELAY 5 7.89e-01 0.069000 9.09e-01
MAJOR CHO METABOLISM SYNTHESIS STARCH STARCH SYNTHASE 6 7.71e-01 0.068700 8.96e-01
TRANSPORT CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS 18 6.14e-01 0.068600 8.08e-01
SIGNALLING RECEPTOR KINASES WALL ASSOCIATED KINASE 18 6.21e-01 -0.067300 8.08e-01
STRESS ABIOTIC TOUCH/WOUNDING 14 6.66e-01 -0.066600 8.37e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION LONG CHAIN FATTY ACID COA LIGASE 8 7.51e-01 0.064800 8.85e-01
SIGNALLING UNSPECIFIED 8 7.51e-01 0.064700 8.85e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE II 5 8.02e-01 0.064700 9.11e-01
RNA REGULATION OF TRANSCRIPTION C3H ZINC FINGER FAMILY 24 5.89e-01 -0.063800 8.02e-01
PROTEIN POSTRANSLATIONAL MODIFICATION 505 2.11e-02 0.060000 8.64e-02
MAJOR CHO METABOLISM DEGRADATION SUCROSE SUSY 6 8.00e-01 -0.059700 9.11e-01
CELL CYCLE PEPTIDYLPROLYL ISOMERASE 32 5.63e-01 -0.059000 7.86e-01
RNA REGULATION OF TRANSCRIPTION AS2,LATERAL ORGAN BOUNDARIES GENE FAMILY 26 6.03e-01 -0.058900 8.08e-01
SIGNALLING 14-3-3 PROTEINS 11 7.38e-01 -0.058300 8.77e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES ADENYLATE KINASE 7 7.93e-01 0.057200 9.10e-01
RNA REGULATION OF TRANSCRIPTION UNCLASSIFIED 270 1.14e-01 0.056000 2.61e-01
PROTEIN TARGETING CHLOROPLAST 36 5.63e-01 -0.055600 7.86e-01
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY 28 6.33e-01 0.052100 8.18e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 19 6.95e-01 -0.051900 8.62e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN PROKARYOTIC CHLOROPLAST 50S SUBUNIT L12 6 8.30e-01 0.050700 9.24e-01
C1-METABOLISM 10 7.83e-01 0.050300 9.04e-01
RNA REGULATION OF TRANSCRIPTION HDA 15 7.36e-01 0.050300 8.77e-01
STRESS BIOTIC PR-PROTEINS PROTEINASE INHIBITORS TRYPSIN INHIBITOR 9 7.97e-01 -0.049500 9.10e-01
CELL WALL CELLULOSE SYNTHESIS COBRA 7 8.23e-01 -0.048700 9.24e-01
MISC ALCOHOL DEHYDROGENASES CINNAMYL ALCOHOL DEHYDROGENASE 5 8.53e-01 -0.047800 9.38e-01
NOT ASSIGNED UNKNOWN 4560 8.33e-07 -0.047500 3.33e-05
RNA REGULATION OF TRANSCRIPTION BZIP TRANSCRIPTION FACTOR FAMILY 60 5.42e-01 0.045500 7.68e-01
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED 73 5.23e-01 0.043200 7.58e-01
SIGNALLING IN SUGAR AND NUTRIENT PHYSIOLOGY 36 6.54e-01 0.043200 8.34e-01
RNA REGULATION OF TRANSCRIPTION METHYL BINDING DOMAIN PROTEINS 10 8.13e-01 -0.043100 9.17e-01
PROTEIN TARGETING SECRETORY PATHWAY VACUOLE 29 6.88e-01 0.043100 8.57e-01
SIGNALLING MAP KINASES 45 6.21e-01 0.042600 8.08e-01
AMINO ACID METABOLISM SYNTHESIS CENTRAL AMINO ACID METABOLISM ASPARTATE ASPARTATE AMINOTRANSFERASE 6 8.57e-01 -0.042600 9.38e-01
TRANSPORT POTASSIUM 37 6.61e-01 0.041600 8.35e-01
TRANSPORT P- AND V-ATPASES 28 7.08e-01 0.040900 8.62e-01
CO-FACTOR AND VITAMINE METABOLISM PANTOTHENATE PANTOTHENATE KINASE (PANK) 5 8.74e-01 0.040800 9.47e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) CO-LIKE, CONSTANS-LIKE ZINC FINGER FAMILY 21 7.49e-01 -0.040300 8.85e-01
FERMENTATION ALDEHYDE DEHYDROGENASE 7 8.59e-01 -0.038700 9.38e-01
C1-METABOLISM GLYCINE HYDROXYMETHYLTRANSFERASE 7 8.60e-01 0.038400 9.38e-01
TRANSPORT PEPTIDES AND OLIGOPEPTIDES 53 6.31e-01 0.038200 8.18e-01
PROTEIN DEGRADATION UBIQUITIN E3 BTB/POZ CULLIN3 BTB/POZ 10 8.35e-01 -0.038100 9.27e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS 16 7.94e-01 -0.037600 9.10e-01
CELL WALL CELL WALL PROTEINS HRGP 15 8.04e-01 -0.037100 9.11e-01
MISC PEROXIDASES 62 6.37e-01 0.034600 8.19e-01
N-METABOLISM MISC 6 8.86e-01 0.033900 9.53e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES MISC 11 8.52e-01 0.032400 9.38e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XI 27 7.73e-01 -0.032100 8.96e-01
RNA REGULATION OF TRANSCRIPTION MADS BOX TRANSCRIPTION FACTOR FAMILY 27 7.76e-01 -0.031700 8.98e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF SKP 16 8.27e-01 0.031600 9.24e-01
MISC OXIDASES - COPPER, FLAVONE ETC 83 6.22e-01 0.031300 8.08e-01
MISC GDSL-MOTIF LIPASE 54 7.07e-01 -0.029600 8.62e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE FRUCTOKINASE 8 8.86e-01 -0.029300 9.53e-01
SIGNALLING RECEPTOR KINASES WHEAT LRK10 LIKE 11 8.68e-01 -0.028900 9.43e-01
RNA REGULATION OF TRANSCRIPTION HSF,HEAT-SHOCK TRANSCRIPTION FACTOR FAMILY 19 8.30e-01 -0.028500 9.24e-01
PROTEIN FOLDING 63 7.13e-01 0.026800 8.64e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF CULLIN 5 9.19e-01 0.026400 9.74e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VIII 10 8.91e-01 -0.025100 9.56e-01
MAJOR CHO METABOLISM DEGRADATION STARCH STARCH CLEAVAGE BETA AMYLASE 8 9.10e-01 -0.023000 9.72e-01
PROTEIN DEGRADATION 129 6.55e-01 -0.022800 8.34e-01
RNA REGULATION OF TRANSCRIPTION GRAS TRANSCRIPTION FACTOR FAMILY 8 9.15e-01 0.021900 9.72e-01
NUCLEOTIDE METABOLISM SALVAGE PHOSPHORIBOSYLTRANSFERASES APRT 5 9.34e-01 0.021500 9.83e-01
SIGNALLING G-PROTEINS 218 6.02e-01 0.020500 8.08e-01
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS 18 8.83e-01 -0.020100 9.53e-01
TCA / ORG TRANSFORMATION OTHER ORGANIC ACID TRANSFORMATONS ATP-CITRATE LYASE 5 9.43e-01 -0.018400 9.86e-01
NOT ASSIGNED NO ONTOLOGY ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN 32 8.59e-01 0.018100 9.38e-01
TRANSPORT UNSPECIFIED CATIONS 37 8.61e-01 -0.016600 9.38e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNAS 14 9.15e-01 0.016500 9.72e-01
MISC PLASTOCYANIN-LIKE 24 9.03e-01 -0.014400 9.66e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 40S SUBUNIT S17 6 9.52e-01 0.014200 9.88e-01
RNA REGULATION OF TRANSCRIPTION ZF-HD 12 9.34e-01 -0.013900 9.83e-01
RNA PROCESSING 108 8.27e-01 0.012200 9.24e-01
STRESS ABIOTIC HEAT 164 8.07e-01 -0.011000 9.13e-01
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP 13 9.48e-01 -0.010400 9.86e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L7 6 9.70e-01 0.008850 9.95e-01
MINOR CHO METABOLISM TREHALOSE TPP 9 9.65e-01 -0.008490 9.95e-01
SIGNALLING RECEPTOR KINASES CRINKLY LIKE 8 9.67e-01 0.008480 9.95e-01
TRANSPORT PHOSPHATE 23 9.46e-01 0.008100 9.86e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE H1 7 9.72e-01 0.007700 9.95e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L7A 5 9.79e-01 -0.006800 9.95e-01
SECONDARY METABOLISM FLAVONOIDS DIHYDROFLAVONOLS 18 9.61e-01 -0.006620 9.95e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES 8 9.75e-01 0.006490 9.95e-01
CELL WALL MODIFICATION 53 9.37e-01 -0.006280 9.84e-01
PROTEIN DEGRADATION SERINE PROTEASE 82 9.27e-01 0.005810 9.81e-01
METAL HANDLING 10 9.76e-01 -0.005530 9.95e-01
NOT ASSIGNED NO ONTOLOGY 1411 7.38e-01 0.005330 8.77e-01
DEVELOPMENT UNSPECIFIED 563 8.55e-01 -0.004510 9.38e-01
HORMONE METABOLISM AUXIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED 92 9.47e-01 0.004000 9.86e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5 9.88e-01 0.003970 9.97e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS 1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 5 9.89e-01 0.003610 9.97e-01
AMINO ACID METABOLISM SYNTHESIS AROMATIC AA TRYPTOPHAN TRYPTOPHAN SYNTHASE 5 9.93e-01 -0.002220 9.97e-01
PROTEIN DEGRADATION SUBTILASES 34 9.87e-01 0.001570 9.97e-01
RNA REGULATION OF TRANSCRIPTION ATSR TRANSCRIPTION FACTOR FAMILY 6 9.95e-01 -0.001490 9.97e-01
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY 113 9.78e-01 -0.001470 9.95e-01
PROTEIN SYNTHESIS INITIATION 77 9.90e-01 0.000800 9.97e-01
PROTEIN DEGRADATION UBIQUITIN E1 7 9.98e-01 0.000505 9.98e-01


Detailed Gene set reports



SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V
380
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_V
setSize 8
pANOVA 9.16e-05
s.dist 0.799
p.adjustANOVA 0.00145



Top enriched genes

Top 20 genes
GeneID Gene Rank
SRF7 10350
SRF8 10191
SRF3 9952
SUB 9826
SRF6 9028
SRF1 8792
SRF4 7837
SRF2 4248

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SRF7 10350
SRF8 10191
SRF3 9952
SUB 9826
SRF6 9028
SRF1 8792
SRF4 7837
SRF2 4248


BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE

BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE
17
set BIODEGRADATION_OF_XENOBIOTICS_LACTOYLGLUTATHIONE_LYASE
setSize 9
pANOVA 7.49e-05
s.dist -0.762
p.adjustANOVA 0.00123



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G15380 -10104
AT5G57040 -9666
AT2G32090 -9277
ATGLX1 -8948
AT1G67280 -8581
AT1G80160 -8479
AT5G41650 -6105
AT1G64185 -4567
AT1G08110 -4262

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G15380 -10104
AT5G57040 -9666
AT2G32090 -9277
ATGLX1 -8948
AT1G67280 -8581
AT1G80160 -8479
AT5G41650 -6105
AT1G64185 -4567
AT1G08110 -4262


TRANSPORT_SULPHATE

TRANSPORT_SULPHATE
440
set TRANSPORT_SULPHATE
setSize 12
pANOVA 5.79e-06
s.dist -0.756
p.adjustANOVA 0.00016



Top enriched genes

Top 20 genes
GeneID Gene Rank
SULTR3;5 -10255
SULTR1;2 -10235
SULTR3;1 -10216
SULTR4;2 -10206
SULTR2;1 -10007
SULTR1;1 -9626
SULTR2;2 -9357
SULTR4;1 -9244
SULTR3;4 -9046
SULTR1;3 -7378
SULTR3;3 934
SULTR3;2 2149

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SULTR3;5 -10255
SULTR1;2 -10235
SULTR3;1 -10216
SULTR4;2 -10206
SULTR2;1 -10007
SULTR1;1 -9626
SULTR2;2 -9357
SULTR4;1 -9244
SULTR3;4 -9046
SULTR1;3 -7378
SULTR3;3 934
SULTR3;2 2149


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
381
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
setSize 10
pANOVA 3.64e-05
s.dist 0.754
p.adjustANOVA 7e-04



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G14390 10328
AT5G63410 10214
AT5G45840 9773
AT5G07150 9540
AT5G41180 9268
AT1G63430 9142
AT2G02780 8889
MDIS2 8028
AT5G14210 6253
AT3G03770 1602

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G14390 10328
AT5G63410 10214
AT5G45840 9773
AT5G07150 9540
AT5G41180 9268
AT1G63430 9142
AT2G02780 8889
MDIS2 8028
AT5G14210 6253
AT3G03770 1602


PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_V

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_V
222
set PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_V
setSize 8
pANOVA 0.000492
s.dist 0.711
p.adjustANOVA 0.00604



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G34500 10784
AT2G42960 9743
AT1G56720 9048
AT5G18500 8619
GPK1 8285
AT1G01540 7330
AT3G59110 6690
AT1G09440 2336

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G34500 10784
AT2G42960 9743
AT1G56720 9048
AT5G18500 8619
GPK1 8285
AT1G01540 7330
AT3G59110 6690
AT1G09440 2336


CELL_WALL_CELLULOSE_SYNTHESIS

CELL_WALL_CELLULOSE_SYNTHESIS
27
set CELL_WALL_CELLULOSE_SYNTHESIS
setSize 12
pANOVA 2.07e-05
s.dist 0.71
p.adjustANOVA 0.000456



Top enriched genes

Top 20 genes
GeneID Gene Rank
ATCSLA11 10712
CSLC12 9769
CSLA10 9517
CSLA9 9021
CSLC6 8989
CSLA2 8929
KOR 8795
CSLC5 7677
PNT1 6526
CSLA14 6309
CSLC8 5391
CSLC4 2373

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ATCSLA11 10712
CSLC12 9769
CSLA10 9517
CSLA9 9021
CSLC6 8989
CSLA2 8929
KOR 8795
CSLC5 7677
PNT1 6526
CSLA14 6309
CSLC8 5391
CSLC4 2373


TRANSPORT_P-_AND_V-ATPASES_H+-TRANSPORTING_TWO-SECTOR_ATPASE

TRANSPORT_P-_AND_V-ATPASES_H+-TRANSPORTING_TWO-SECTOR_ATPASE
434
set TRANSPORT_P-_AND_V-ATPASES_H+-TRANSPORTING_TWO-SECTOR_ATPASE
setSize 7
pANOVA 0.00127
s.dist -0.703
p.adjustANOVA 0.0128



Top enriched genes

Top 20 genes
GeneID Gene Rank
VHA-c3 -9612
AVA-P4 -7962
VHA-E3 -7013
VHA-C2 -6954
VHA-D1 -6682
VHA-D2 -6497
VHA-F -5345

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
VHA-c3 -9612
AVA-P4 -7962
VHA-E3 -7013
VHA-C2 -6954
VHA-D1 -6682
VHA-D2 -6497
VHA-F -5345


TCA_/_ORG_TRANSFORMATION_OTHER_ORGANIC_ACID_TRANSFORMATONS_CYT_MDH

TCA_/_ORG_TRANSFORMATION_OTHER_ORGANIC_ACID_TRANSFORMATONS_CYT_MDH
414
set TCA_/_ORG_TRANSFORMATION_OTHER_ORGANIC_ACID_TRANSFORMATONS_CYT_MDH
setSize 5
pANOVA 0.00757
s.dist -0.69
p.adjustANOVA 0.0459



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G58330 -9874
MDH2 -8657
MDH1 -8223
AT5G56720 -6151
MDH -2139

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G58330 -9874
MDH2 -8657
MDH1 -8223
AT5G56720 -6151
MDH -2139


PROTEIN_SYNTHESIS_RIBOSOMAL_RNA

PROTEIN_SYNTHESIS_RIBOSOMAL_RNA
237
set PROTEIN_SYNTHESIS_RIBOSOMAL_RNA
setSize 14
pANOVA 1.5e-05
s.dist -0.668
p.adjustANOVA 0.000367



Top enriched genes

Top 20 genes
GeneID Gene Rank
RRN26 -8890.0
RRN18 -8740.0
AT2G01010 -8649.0
RRN16S.1 -8496.5
RRN16S.2 -8496.5
AT3G41768 -7851.0
RRN23S.1 -7753.5
RRN23S.2 -7753.5
RRN5 -7731.0
AT2G01020 -7716.5
AT3G41979 -7716.5
RRN4.5S.1 -6423.5
RRN4.5S.2 -6423.5
AT2G37990 7759.0

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
RRN26 -8890.0
RRN18 -8740.0
AT2G01010 -8649.0
RRN16S.1 -8496.5
RRN16S.2 -8496.5
AT3G41768 -7851.0
RRN23S.1 -7753.5
RRN23S.2 -7753.5
RRN5 -7731.0
AT2G01020 -7716.5
AT3G41979 -7716.5
RRN4.5S.1 -6423.5
RRN4.5S.2 -6423.5
AT2G37990 7759.0


PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_WD-REPEAT_PROTEINS

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_WD-REPEAT_PROTEINS
246
set PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_WD-REPEAT_PROTEINS
setSize 6
pANOVA 0.0047
s.dist 0.666
p.adjustANOVA 0.0348



Top enriched genes

Top 20 genes
GeneID Gene Rank
BOP1 9917
TOZ 9098
AT4G04940 7495
AT3G21540 6314
SWA1 5746
AT5G14050 5684

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
BOP1 9917
TOZ 9098
AT4G04940 7495
AT3G21540 6314
SWA1 5746
AT5G14050 5684


RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY
282
set RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY
setSize 16
pANOVA 4.31e-06
s.dist 0.663
p.adjustANOVA 0.000136



Top enriched genes

Top 20 genes
GeneID Gene Rank
ARF18 10912
ARF6 10873
ARF9 10849
ARF20 10832
ARF10 10701
ARF8 10694
ARF16 10426
ARF11 10333
ARF19 10279
ARF4 10252
ARF14 7774
ARF17 5487
ARF1 3537
ARF3 291
ARF2 -1049
ARF5 -4718

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ARF18 10912
ARF6 10873
ARF9 10849
ARF20 10832
ARF10 10701
ARF8 10694
ARF16 10426
ARF11 10333
ARF19 10279
ARF4 10252
ARF14 7774
ARF17 5487
ARF1 3537
ARF3 291
ARF2 -1049
ARF5 -4718


DNA_SYNTHESIS/CHROMATIN_STRUCTURE_HISTONE_CORE_H4

DNA_SYNTHESIS/CHROMATIN_STRUCTURE_HISTONE_CORE_H4
55
set DNA_SYNTHESIS/CHROMATIN_STRUCTURE_HISTONE_CORE_H4
setSize 8
pANOVA 0.00123
s.dist -0.66
p.adjustANOVA 0.0126



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G07660 -8833
AT3G53730 -8255
AT5G59690 -7756
AT1G07820 -7709
HIS4 -6868
AT3G45930 -6090
AT5G59970 -4438
AT3G46320 -3579

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G07660 -8833
AT3G53730 -8255
AT5G59690 -7756
AT1G07820 -7709
HIS4 -6868
AT3G45930 -6090
AT5G59970 -4438
AT3G46320 -3579


AMINO_ACID_METABOLISM_MISC

AMINO_ACID_METABOLISM_MISC
6
set AMINO_ACID_METABOLISM_MISC
setSize 5
pANOVA 0.0136
s.dist 0.637
p.adjustANOVA 0.07



Top enriched genes

Top 20 genes
GeneID Gene Rank
ACR4 10848
ACR3 10625
ACR5 9069
ACR8 4016
MTK 774

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ACR4 10848
ACR3 10625
ACR5 9069
ACR8 4016
MTK 774


PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_DEXD-BOX_HELICASES

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_DEXD-BOX_HELICASES
241
set PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_PRE-RRNA_PROCESSING_AND_MODIFICATIONS_DEXD-BOX_HELICASES
setSize 14
pANOVA 4.26e-05
s.dist 0.632
p.adjustANOVA 0.000785



Top enriched genes

Top 20 genes
GeneID Gene Rank
RH16 10441
RH29 10190
RH27 10112
RH18 9726
RH57 9564
NOF1 9132
HEN2 9085
FAS4 8898
AT3G16840 7901
RH10 6853
RH5 6673
RH36 1341
RH32 1214
EIF4A3 -3054

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
RH16 10441
RH29 10190
RH27 10112
RH18 9726
RH57 9564
NOF1 9132
HEN2 9085
FAS4 8898
AT3G16840 7901
RH10 6853
RH5 6673
RH36 1341
RH32 1214
EIF4A3 -3054


NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN
173
set NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN
setSize 5
pANOVA 0.0147
s.dist 0.63
p.adjustANOVA 0.072



Top enriched genes

Top 20 genes
GeneID Gene Rank
SNL4 8947
SNL3 8380
SNL1 6814
SNL6 6377
AT1G24210 4452

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
SNL4 8947
SNL3 8380
SNL1 6814
SNL6 6377
AT1G24210 4452


MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE
154
set MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE
setSize 10
pANOVA 0.000564
s.dist -0.63
p.adjustANOVA 0.00655



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT3G10860 -8880
AT1G36380 -8750
AT1G15120 -7842
AT5G05370 -7635
UCR1-2 -7552
QCR7-2 -6826
QCR7-1 -5698
AT2G07727 -4936
AT3G52730 -4369
UCR1-1 -1225

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT3G10860 -8880
AT1G36380 -8750
AT1G15120 -7842
AT5G05370 -7635
UCR1-2 -7552
QCR7-2 -6826
QCR7-1 -5698
AT2G07727 -4936
AT3G52730 -4369
UCR1-1 -1225


NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_NUCLEOSIDE_DIPHOSPHATE_KINASE

NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_NUCLEOSIDE_DIPHOSPHATE_KINASE
184
set NUCLEOTIDE_METABOLISM_PHOSPHOTRANSFER_AND_PYROPHOSPHATASES_NUCLEOSIDE_DIPHOSPHATE_KINASE
setSize 5
pANOVA 0.0187
s.dist -0.607
p.adjustANOVA 0.0844



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G17410 -8854
NDK1 -6808
NDPK3 -6414
NDPK2 -5570
NDK4 -3036

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G17410 -8854
NDK1 -6808
NDPK3 -6414
NDPK2 -5570
NDK4 -3036


SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CCR1

SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CCR1
356
set SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CCR1
setSize 5
pANOVA 0.0231
s.dist -0.587
p.adjustANOVA 0.0911



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G30470 -10051
CCR2 -9606
AT5G14700 -8656
AT5G58490 -4081
CCR1 2810

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G30470 -10051
CCR2 -9606
AT5G14700 -8656
AT5G58490 -4081
CCR1 2810


TRANSPORT_AMMONIUM

TRANSPORT_AMMONIUM
420
set TRANSPORT_AMMONIUM
setSize 7
pANOVA 0.00739
s.dist 0.585
p.adjustANOVA 0.0459



Top enriched genes

Top 20 genes
GeneID Gene Rank
AMT1-5 10906
AMT1-3 10903
AMT1-2 10819
AMT1-1 7322
AMT2 6726
DRG1 1107
DRG2 -2217

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AMT1-5 10906
AMT1-3 10903
AMT1-2 10819
AMT1-1 7322
AMT2 6726
DRG1 1107
DRG2 -2217


PROTEIN_DEGRADATION_AUTOPHAGY

PROTEIN_DEGRADATION_AUTOPHAGY
199
set PROTEIN_DEGRADATION_AUTOPHAGY
setSize 22
pANOVA 2.54e-06
s.dist -0.579
p.adjustANOVA 8.62e-05



Top enriched genes

Top 20 genes
GeneID Gene Rank
ATG8B -10080
APG8A -9539
ATG3 -9419
ATG8I -9188
ATG8E -8927
ATG5 -8641
ATG8G -8459
ATG8C -8413
ATG4B -7953
ATG4A -7860
ATG12A -7198
ATG12B -6998
ATG18F -6228
ATG8F -5477
ATG8H -5028
ATG9 -4712
ATG18C -3523
ATG10 -2587
ATG18H -2456
ATG18D -2384

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ATG8B -10080
APG8A -9539
ATG3 -9419
ATG8I -9188
ATG8E -8927
ATG5 -8641
ATG8G -8459
ATG8C -8413
ATG4B -7953
ATG4A -7860
ATG12A -7198
ATG12B -6998
ATG18F -6228
ATG8F -5477
ATG8H -5028
ATG9 -4712
ATG18C -3523
ATG10 -2587
ATG18H -2456
ATG18D -2384
ATG7 660
ATG18G 6068


MINOR_CHO_METABOLISM_CALLOSE

MINOR_CHO_METABOLISM_CALLOSE
121
set MINOR_CHO_METABOLISM_CALLOSE
setSize 14
pANOVA 0.000183
s.dist 0.578
p.adjustANOVA 0.00252



Top enriched genes

Top 20 genes
GeneID Gene Rank
CALS4 10416
CALS3 9489
CALS8 9215
CALS11 9082
CALS1 9004
ATGSL10 8650
CALS10 8345
CALS2 6861
CALS7 6834
CALS6 6802
PDCB1 6342
CALS12 5623
CALS5 1864
AT3G14780 -8486

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CALS4 10416
CALS3 9489
CALS8 9215
CALS11 9082
CALS1 9004
ATGSL10 8650
CALS10 8345
CALS2 6861
CALS7 6834
CALS6 6802
PDCB1 6342
CALS12 5623
CALS5 1864
AT3G14780 -8486


HORMONE_METABOLISM_JASMONATE_SYNTHESIS-DEGRADATION_12-OXO-PDA-REDUCTASE

HORMONE_METABOLISM_JASMONATE_SYNTHESIS-DEGRADATION_12-OXO-PDA-REDUCTASE
83
set HORMONE_METABOLISM_JASMONATE_SYNTHESIS-DEGRADATION_12-OXO-PDA-REDUCTASE
setSize 5
pANOVA 0.0264
s.dist -0.573
p.adjustANOVA 0.098



Top enriched genes

Top 20 genes
GeneID Gene Rank
OPR1 -10059
OPR3 -8415
OPR2 -7127
AT1G18020 -3600
AT1G17990 322

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
OPR1 -10059
OPR3 -8415
OPR2 -7127
AT1G18020 -3600
AT1G17990 322


AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE

AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE
12
set AMINO_ACID_METABOLISM_SYNTHESIS_BRANCHED_CHAIN_GROUP_COMMON_BRANCHED-CHAIN_AMINO_ACID_AMINOTRANSFERASE
setSize 6
pANOVA 0.0153
s.dist 0.571
p.adjustANOVA 0.0737



Top enriched genes

Top 20 genes
GeneID Gene Rank
BCAT4 9981
BCAT6 9167
BCAT3 8894
ATBCAT-5 7796
ATBCAT-1 1898
BCAT2 479

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
BCAT4 9981
BCAT6 9167
BCAT3 8894
ATBCAT-5 7796
ATBCAT-1 1898
BCAT2 479


HORMONE_METABOLISM_BRASSINOSTEROID_SIGNAL_TRANSDUCTION_BZR

HORMONE_METABOLISM_BRASSINOSTEROID_SIGNAL_TRANSDUCTION_BZR
69
set HORMONE_METABOLISM_BRASSINOSTEROID_SIGNAL_TRANSDUCTION_BZR
setSize 6
pANOVA 0.0158
s.dist 0.569
p.adjustANOVA 0.0744



Top enriched genes

Top 20 genes
GeneID Gene Rank
BEH4 10297
BZR1 9258
BES1 8260
BEH2 5029
BEH1 4106
BEH3 1099

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
BEH4 10297
BZR1 9258
BES1 8260
BEH2 5029
BEH1 4106
BEH3 1099


STRESS_BIOTIC_RESPIRATORY_BURST

STRESS_BIOTIC_RESPIRATORY_BURST
409
set STRESS_BIOTIC_RESPIRATORY_BURST
setSize 8
pANOVA 0.00561
s.dist 0.566
p.adjustANOVA 0.0379



Top enriched genes

Top 20 genes
GeneID Gene Rank
RBOHI 10468
RBOHB 10372
RBOHG 9229
RBOHE 8516
RBOHC 8013
RBOHF 6316
RBOHA 4515
RBOHD -6982

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
RBOHI 10468
RBOHB 10372
RBOHG 9229
RBOHE 8516
RBOHC 8013
RBOHF 6316
RBOHA 4515
RBOHD -6982


NUCLEOTIDE_METABOLISM_SALVAGE_PHOSPHORIBOSYLTRANSFERASES_UPP

NUCLEOTIDE_METABOLISM_SALVAGE_PHOSPHORIBOSYLTRANSFERASES_UPP
188
set NUCLEOTIDE_METABOLISM_SALVAGE_PHOSPHORIBOSYLTRANSFERASES_UPP
setSize 5
pANOVA 0.03
s.dist 0.561
p.adjustANOVA 0.107



Top enriched genes

Top 20 genes
GeneID Gene Rank
UKL4 9897
UKL1 8459
UKL2 7888
UKL3 6134
UPP -1110

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
UKL4 9897
UKL1 8459
UKL2 7888
UKL3 6134
UPP -1110


PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_BRIX

PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_BRIX
239
set PROTEIN_SYNTHESIS_RIBOSOME_BIOGENESIS_BRIX
setSize 6
pANOVA 0.0218
s.dist 0.541
p.adjustANOVA 0.0883



Top enriched genes

Top 20 genes
GeneID Gene Rank
MEE49 8800
BRIX1-2 7226
PPAN 7015
BRIX1-1 6847
IMP4 5079
AT3G23620 1303

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
MEE49 8800
BRIX1-2 7226
PPAN 7015
BRIX1-1 6847
IMP4 5079
AT3G23620 1303


PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION

PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION
257
set PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION
setSize 12
pANOVA 0.00134
s.dist -0.535
p.adjustANOVA 0.0132



Top enriched genes

Top 20 genes
GeneID Gene Rank
AOX4 -9114.0
PGRL1B -9071.0
NDHA -7585.0
PGRL1A -6900.0
NDHH -6430.0
NDHE -6419.0
NDHB.1 -5981.5
NDHB.2 -5981.5
NDHI -5768.0
PIFI -1756.0
PGR5 -263.0
NDF2 936.0

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AOX4 -9114.0
PGRL1B -9071.0
NDHA -7585.0
PGRL1A -6900.0
NDHH -6430.0
NDHE -6419.0
NDHB.1 -5981.5
NDHB.2 -5981.5
NDHI -5768.0
PIFI -1756.0
PGR5 -263.0
NDF2 936.0


SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CAD

SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CAD
354
set SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_CAD
setSize 7
pANOVA 0.0144
s.dist -0.534
p.adjustANOVA 0.072



Top enriched genes

Top 20 genes
GeneID Gene Rank
CAD5 -9971
CAD1 -8788
CAD9 -8596
CAD6 -6133
CAD2 -4088
CAD8 -2353
CAD4 2407

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
CAD5 -9971
CAD1 -8788
CAD9 -8596
CAD6 -6133
CAD2 -4088
CAD8 -2353
CAD4 2407


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VIII_VIII-1

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VIII_VIII-1
383
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VIII_VIII-1
setSize 9
pANOVA 0.00566
s.dist 0.533
p.adjustANOVA 0.0379



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G53340 10409
AT3G53590 9495
AT5G49770 8655
AT5G01950 6262
AT5G37450 6175
AT1G06840 6166
AT5G49780 4027
AT1G79620 3550
AT5G49760 -1133

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G53340 10409
AT3G53590 9495
AT5G49770 8655
AT5G01950 6262
AT5G37450 6175
AT1G06840 6166
AT5G49780 4027
AT1G79620 3550
AT5G49760 -1133


MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
157
set MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
setSize 34
pANOVA 9.67e-08
s.dist -0.528
p.adjustANOVA 6.11e-06



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G16700 -8231
FRO1 -7956
NAD1C -7954
AT2G02050 -7905
AT1G49140 -7606
CI51 -7570
AT5G11770 -7431
AT3G18410 -7415
AT3G06310 -7135
AT2G07689 -7014
AT3G03100 -6849
AT2G20360 -6003
AT5G52840 -5812
AT2G47690 -5696
EMB1467 -5656
NAD6 -5584
AT3G03070 -5415
NAD1B -5350
NAD9 -5212
NAD5A -4922

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G16700 -8231
FRO1 -7956
NAD1C -7954
AT2G02050 -7905
AT1G49140 -7606
CI51 -7570
AT5G11770 -7431
AT3G18410 -7415
AT3G06310 -7135
AT2G07689 -7014
AT3G03100 -6849
AT2G20360 -6003
AT5G52840 -5812
AT2G47690 -5696
EMB1467 -5656
NAD6 -5584
AT3G03070 -5415
NAD1B -5350
NAD9 -5212
NAD5A -4922
AT5G18800 -4889
AT1G79010 -4225
DER2.1 -4049
NAD4 -4032
AT5G47890 -3907
AT3G62790 -3666
NAD7 -3487
NAD5C -3219
NAD2B -3169
AT4G26965 -3151
AT2G07785 -3145
NAD2A -2768
AT2G07751 -2602
AT4G02580 -812


NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN
172
set NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN
setSize 6
pANOVA 0.0251
s.dist -0.528
p.adjustANOVA 0.0955



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT3G17520 -7720
AT2G03850 -7505
AT1G72100 -5351
AT2G42560 -4419
AT4G36600 -3769
AT4G13230 -3009

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT3G17520 -7720
AT2G03850 -7505
AT1G72100 -5351
AT2G42560 -4419
AT4G36600 -3769
AT4G13230 -3009


HORMONE_METABOLISM_CYTOKININ_SIGNAL_TRANSDUCTION

HORMONE_METABOLISM_CYTOKININ_SIGNAL_TRANSDUCTION
72
set HORMONE_METABOLISM_CYTOKININ_SIGNAL_TRANSDUCTION
setSize 7
pANOVA 0.0155
s.dist 0.528
p.adjustANOVA 0.0739



Top enriched genes

Top 20 genes
GeneID Gene Rank
AHK2 10551
ARR12 10284
AHK4 9820
AHK5 9376
AHK1 7783
AHK3 -2357
ALL1 -4097

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AHK2 10551
ARR12 10284
AHK4 9820
AHK5 9376
AHK1 7783
AHK3 -2357
ALL1 -4097


GLYCOLYSIS_CYTOSOLIC_BRANCH_PHOSPHOGLYCERATE_MUTASE

GLYCOLYSIS_CYTOSOLIC_BRANCH_PHOSPHOGLYCERATE_MUTASE
60
set GLYCOLYSIS_CYTOSOLIC_BRANCH_PHOSPHOGLYCERATE_MUTASE
setSize 8
pANOVA 0.0102
s.dist -0.525
p.adjustANOVA 0.0578



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT3G08590 -9739
AT1G08940 -8707
AT1G09932 -8165
PGM -5294
IPSP -5197
PGM1 -3243
AT4G09520 -1783
AT3G30841 78

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT3G08590 -9739
AT1G08940 -8707
AT1G09932 -8165
PGM -5294
IPSP -5197
PGM1 -3243
AT4G09520 -1783
AT3G30841 78


SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE

SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE
346
set SECONDARY_METABOLISM_FLAVONOIDS_ISOFLAVONES_ISOFLAVONE_REDUCTASE
setSize 7
pANOVA 0.0194
s.dist -0.51
p.adjustANOVA 0.0844



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G75280 -10285
AT1G75290 -8885
AT1G19540 -7366
PRR2 -6813
PLR3 -3594
AT1G75300 -1553
PCBER1 2758

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G75280 -10285
AT1G75290 -8885
AT1G19540 -7366
PRR2 -6813
PLR3 -3594
AT1G75300 -1553
PCBER1 2758


LIPID_METABOLISM_FA_SYNTHESIS_AND_FA_ELONGATION_BETA_KETOACYL_COA_SYNTHASE

LIPID_METABOLISM_FA_SYNTHESIS_AND_FA_ELONGATION_BETA_KETOACYL_COA_SYNTHASE
94
set LIPID_METABOLISM_FA_SYNTHESIS_AND_FA_ELONGATION_BETA_KETOACYL_COA_SYNTHASE
setSize 7
pANOVA 0.0195
s.dist -0.51
p.adjustANOVA 0.0844



Top enriched genes

Top 20 genes
GeneID Gene Rank
KCS3 -9773
KCS19 -8321
KCS20 -6068
KCS1 -5867
KCS12 -4836
KCS2 -4610
KCS11 3769

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
KCS3 -9773
KCS19 -8321
KCS20 -6068
KCS1 -5867
KCS12 -4836
KCS2 -4610
KCS11 3769


SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE

SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE
341
set SECONDARY_METABOLISM_FLAVONOIDS_ANTHOCYANINS_ANTHOCYANIN_5-AROMATIC_ACYLTRANSFERASE
setSize 7
pANOVA 0.0199
s.dist -0.508
p.adjustANOVA 0.0855



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G39090 -10152
PMAT1 -9852
PMAT2 -9544
AT1G03495 -4461
AT5G39080 -4286
3AT1 155
AT3G29680 2570

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G39090 -10152
PMAT1 -9852
PMAT2 -9544
AT1G03495 -4461
AT5G39080 -4286
3AT1 155
AT3G29680 2570


MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_COMPLEX_I

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_COMPLEX_I
156
set MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_COMPLEX_I
setSize 7
pANOVA 0.0203
s.dist -0.507
p.adjustANOVA 0.0855



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT1G14450 -7269
AT3G12260 -7081
NQR -6587
PHB1 -5089
PHB6 -4344
NAD4L -4162
NAD1A -925

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT1G14450 -7269
AT3G12260 -7081
NQR -6587
PHB1 -5089
PHB6 -4344
NAD4L -4162
NAD1A -925


NOT_ASSIGNED_NO_ONTOLOGY_FORMIN_HOMOLOGY_2_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_FORMIN_HOMOLOGY_2_DOMAIN-CONTAINING_PROTEIN
169
set NOT_ASSIGNED_NO_ONTOLOGY_FORMIN_HOMOLOGY_2_DOMAIN-CONTAINING_PROTEIN
setSize 17
pANOVA 0.000339
s.dist 0.502
p.adjustANOVA 0.00441



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G07770 10413
FH1 9692
FH6 8917
FH14 8773
AT2G25050 8455
FH9 8069
AFH3 7875
ZOP1 7235
FH5 6573
FH13 6380
FH19 5309
AT5G07650 5089
AT5G07760 4487
FH11 1590
FH2 1201
FH10 461
FH7 -4827

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G07770 10413
FH1 9692
FH6 8917
FH14 8773
AT2G25050 8455
FH9 8069
AFH3 7875
ZOP1 7235
FH5 6573
FH13 6380
FH19 5309
AT5G07650 5089
AT5G07760 4487
FH11 1590
FH2 1201
FH10 461
FH7 -4827


PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN

PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN
259
set PS_LIGHTREACTION_OTHER_ELECTRON_CARRIER_(OX/RED)_FERREDOXIN
setSize 5
pANOVA 0.053
s.dist -0.5
p.adjustANOVA 0.163



Top enriched genes

Top 20 genes
GeneID Gene Rank
FD2 -9156
FD1 -6535
AT4G32590 -5198
AT5G07950 -4292
AT1G02180 213

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FD2 -9156
FD1 -6535
AT4G32590 -5198
AT5G07950 -4292
AT1G02180 213


RNA_REGULATION_OF_TRANSCRIPTION_NIN-LIKE_BZIP-RELATED_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_NIN-LIKE_BZIP-RELATED_FAMILY
320
set RNA_REGULATION_OF_TRANSCRIPTION_NIN-LIKE_BZIP-RELATED_FAMILY
setSize 7
pANOVA 0.0224
s.dist 0.498
p.adjustANOVA 0.0892



Top enriched genes

Top 20 genes
GeneID Gene Rank
NLP6 10639
NLP3 10588
AT2G43500 10307
NLP2 9643
NLP7 2290
NLP1 1139
RKD5 -5448

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
NLP6 10639
NLP3 10588
AT2G43500 10307
NLP2 9643
NLP7 2290
NLP1 1139
RKD5 -5448


SIGNALLING_RECEPTOR_KINASES_EXTENSIN

SIGNALLING_RECEPTOR_KINASES_EXTENSIN
375
set SIGNALLING_RECEPTOR_KINASES_EXTENSIN
setSize 5
pANOVA 0.0551
s.dist 0.495
p.adjustANOVA 0.168



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT4G02010 10747
AT5G56890 10072
ALE2 8412
AT1G54820 1455
AT3G58690 -2878

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT4G02010 10747
AT5G56890 10072
ALE2 8412
AT1G54820 1455
AT3G58690 -2878


AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN

AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN
1
set AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN
setSize 11
pANOVA 0.00456
s.dist -0.494
p.adjustANOVA 0.0348



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G47720 -9651
CHY1 -8863
ECI3 -8193
ECI2 -8105
ECHIA -7522
ECI1 -6249
AT3G60510 -2698
AT4G13360 -2477
AT1G06550 -1212
AT4G16800 -877
AT3G24360 1618

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G47720 -9651
CHY1 -8863
ECI3 -8193
ECI2 -8105
ECHIA -7522
ECI1 -6249
AT3G60510 -2698
AT4G13360 -2477
AT1G06550 -1212
AT4G16800 -877
AT3G24360 1618


SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL

SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL
353
set SECONDARY_METABOLISM_PHENYLPROPANOIDS_LIGNIN_BIOSYNTHESIS_4CL
setSize 7
pANOVA 0.0246
s.dist 0.491
p.adjustANOVA 0.0952



Top enriched genes

Top 20 genes
GeneID Gene Rank
4CL2 9528
4CLL6 8294
4CLL9 7797
4CL1 6790
4CL4 5323
4CL3 3547
4CLL7 -2692

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
4CL2 9528
4CLL6 8294
4CLL9 7797
4CL1 6790
4CL4 5323
4CL3 3547
4CLL7 -2692


SIGNALLING_PHOSPHINOSITIDES_PHOSPHATIDYLINOSITOL-4-PHOSPHATE_5-KINASE

SIGNALLING_PHOSPHINOSITIDES_PHOSPHATIDYLINOSITOL-4-PHOSPHATE_5-KINASE
369
set SIGNALLING_PHOSPHINOSITIDES_PHOSPHATIDYLINOSITOL-4-PHOSPHATE_5-KINASE
setSize 18
pANOVA 0.000317
s.dist 0.49
p.adjustANOVA 0.00424



Top enriched genes

Top 20 genes
GeneID Gene Rank
FAB1D 10027
PIP5K6 9745
PIP5K3 9561
FAB1C 9406
PIP5K9 9281
PIP5K4 9113
AT1G60890 8941
PIP5K5 7972
PIP5K7 7565
AT2G35170 7328
FAB1A 5260
FAB1B 5119
PIP5K2 4345
AT1G77660 3378
PIP5K1 661
ATPIPK10 -964
AT4G17080 -2465
AT1G21920 -5188

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
FAB1D 10027
PIP5K6 9745
PIP5K3 9561
FAB1C 9406
PIP5K9 9281
PIP5K4 9113
AT1G60890 8941
PIP5K5 7972
PIP5K7 7565
AT2G35170 7328
FAB1A 5260
FAB1B 5119
PIP5K2 4345
AT1G77660 3378
PIP5K1 661
ATPIPK10 -964
AT4G17080 -2465
AT1G21920 -5188


SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII
382
set SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VII
setSize 10
pANOVA 0.00729
s.dist 0.49
p.adjustANOVA 0.0459



Top enriched genes

Top 20 genes
GeneID Gene Rank
MEE62 10179
AT4G36180 10154
IRK 8713
AT1G12460 8111
AT1G62950 7950
AT1G75640 7785
AT3G28040 5827
PXC2 3137
AT2G24230 -1250
AT5G58150 -5562

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
MEE62 10179
AT4G36180 10154
IRK 8713
AT1G12460 8111
AT1G62950 7950
AT1G75640 7785
AT3G28040 5827
PXC2 3137
AT2G24230 -1250
AT5G58150 -5562


SIGNALLING_PHOSPHINOSITIDES

SIGNALLING_PHOSPHINOSITIDES
368
set SIGNALLING_PHOSPHINOSITIDES
setSize 16
pANOVA 0.000713
s.dist 0.489
p.adjustANOVA 0.00787



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT2G17930 10519
PCAP1 10463
AT4G36080 10225
PI4KG1 8780
PI4KG7 8486
AT1G27570 7619
SAC9 7149
AT2G15900 6759
SAC2 6489
SAC1 6293
SAC5 5537
PI4KA1 4932
SAC8 4492
SAC4 3725
AT1G64460 -5591
PH1 -8053

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT2G17930 10519
PCAP1 10463
AT4G36080 10225
PI4KG1 8780
PI4KG7 8486
AT1G27570 7619
SAC9 7149
AT2G15900 6759
SAC2 6489
SAC1 6293
SAC5 5537
PI4KA1 4932
SAC8 4492
SAC4 3725
AT1G64460 -5591
PH1 -8053


TRANSPORT_MAJOR_INTRINSIC_PROTEINS_TIP

TRANSPORT_MAJOR_INTRINSIC_PROTEINS_TIP
425
set TRANSPORT_MAJOR_INTRINSIC_PROTEINS_TIP
setSize 7
pANOVA 0.0259
s.dist -0.486
p.adjustANOVA 0.0972



Top enriched genes

Top 20 genes
GeneID Gene Rank
TIP2-2 -10088
TIP2-3 -9743
TIP1-3 -9200
TIP1-1 -8835
TIP2-1 -1531
TIP1-2 515
TIP4-1 4944

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
TIP2-2 -10088
TIP2-3 -9743
TIP1-3 -9200
TIP1-1 -8835
TIP2-1 -1531
TIP1-2 515
TIP4-1 4944


AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TYROSINE

AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TYROSINE
2
set AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TYROSINE
setSize 7
pANOVA 0.0278
s.dist -0.48
p.adjustANOVA 0.101



Top enriched genes

Top 20 genes
GeneID Gene Rank
AT5G53970 -9523
AT4G28410 -9456
HGO -9275
AT4G15940 -7829
FAH -6812
FAHD2 3707
SUR1 5675

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
AT5G53970 -9523
AT4G28410 -9456
HGO -9275
AT4G15940 -7829
FAH -6812
FAHD2 3707
SUR1 5675


TCA_/_ORG_TRANSFORMATION_TCA_IDH

TCA_/_ORG_TRANSFORMATION_TCA_IDH
416
set TCA_/_ORG_TRANSFORMATION_TCA_IDH
setSize 5
pANOVA 0.0645
s.dist -0.477
p.adjustANOVA 0.181



Top enriched genes

Top 20 genes
GeneID Gene Rank
ICDH -8030
CICDH -6240
AT5G14590 -5480
IDH2 -3148
IDH1 -883

Click HERE to show all gene set members

All member genes
GeneID Gene Rank
ICDH -8030
CICDH -6240
AT5G14590 -5480
IDH2 -3148
IDH1 -883


Here is the session info with all the versions of packages used.

sessionInfo()
## R version 4.0.3 (2020-10-10)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.2 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] parallel  stats4    stats     graphics  grDevices utils     datasets 
## [8] methods   base     
## 
## other attached packages:
##  [1] pkgload_1.2.0               GGally_2.1.1               
##  [3] ggplot2_3.3.3               beeswarm_0.3.1             
##  [5] gtools_3.8.2                tibble_3.1.0               
##  [7] dplyr_1.0.5                 echarts4r_0.4.0            
##  [9] vioplot_0.3.5               zoo_1.8-9                  
## [11] sm_2.2-5.6                  UpSetR_1.4.0               
## [13] eulerr_6.1.0                kableExtra_1.3.4           
## [15] mitch_1.2.2                 DESeq2_1.30.0              
## [17] SummarizedExperiment_1.20.0 Biobase_2.50.0             
## [19] MatrixGenerics_1.2.0        matrixStats_0.58.0         
## [21] GenomicRanges_1.42.0        GenomeInfoDb_1.26.0        
## [23] IRanges_2.24.0              S4Vectors_0.28.0           
## [25] BiocGenerics_0.36.0         gplots_3.1.1               
## [27] reshape2_1.4.4             
## 
## loaded via a namespace (and not attached):
##  [1] colorspace_2.0-0       ellipsis_0.3.1         rprojroot_2.0.2       
##  [4] XVector_0.30.0         rstudioapi_0.13        bit64_4.0.5           
##  [7] AnnotationDbi_1.52.0   fansi_0.4.2            xml2_1.3.2            
## [10] splines_4.0.3          cachem_1.0.4           geneplotter_1.68.0    
## [13] knitr_1.31             polyclip_1.10-0        jsonlite_1.7.2        
## [16] annotate_1.68.0        shiny_1.6.0            compiler_4.0.3        
## [19] httr_1.4.2             assertthat_0.2.1       Matrix_1.3-2          
## [22] fastmap_1.1.0          later_1.1.0.1          htmltools_0.5.1.1     
## [25] tools_4.0.3            gtable_0.3.0           glue_1.4.2            
## [28] GenomeInfoDbData_1.2.4 Rcpp_1.0.6             jquerylib_0.1.3       
## [31] vctrs_0.3.6            svglite_2.0.0          polylabelr_0.2.0      
## [34] xfun_0.22              stringr_1.4.0          testthat_3.0.2        
## [37] rvest_1.0.0            mime_0.10              lifecycle_1.0.0       
## [40] XML_3.99-0.6           zlibbioc_1.36.0        MASS_7.3-53.1         
## [43] scales_1.1.1           promises_1.2.0.1       RColorBrewer_1.1-2    
## [46] yaml_2.2.1             memoise_2.0.0          gridExtra_2.3         
## [49] sass_0.3.1             reshape_0.8.8          stringi_1.5.3         
## [52] RSQLite_2.2.4          highr_0.8              genefilter_1.72.0     
## [55] desc_1.3.0             caTools_1.18.1         BiocParallel_1.24.1   
## [58] rlang_0.4.10           pkgconfig_2.0.3        systemfonts_1.0.1     
## [61] bitops_1.0-6           evaluate_0.14          lattice_0.20-41       
## [64] purrr_0.3.4            htmlwidgets_1.5.3      bit_4.0.4             
## [67] tidyselect_1.1.0       plyr_1.8.6             magrittr_2.0.1        
## [70] R6_2.5.0               generics_0.1.0         DelayedArray_0.16.0   
## [73] DBI_1.1.1              withr_2.4.1            pillar_1.5.1          
## [76] survival_3.2-10        RCurl_1.98-1.3         crayon_1.4.1          
## [79] KernSmooth_2.23-18     utf8_1.2.1             rmarkdown_2.7         
## [82] locfit_1.5-9.4         grid_4.0.3             blob_1.2.1            
## [85] digest_0.6.27          webshot_0.5.2          xtable_1.8-4          
## [88] httpuv_1.5.5           munsell_0.5.0          viridisLite_0.3.0     
## [91] bslib_0.2.4            tcltk_4.0.3

END of report