Mitch Report

date generated: 2020-10-07

Background

Mitch performs unidimensional and multidimensional gene set enrichment analysis. The concept behind this dates to work by Cox and Mann (https://doi.org/10.1186/1471-2105-13-S16-S12). This implementation is suited to R based workflows of multi-omics datasets. This software was developed by Antony Kaspi and Mark Ziemann. Learn more about Mitch at the website: https://github.com/markziemann/Mitch

Input profiles

Here is the first few lines of the input profile.

##                       x
## 1MMP         1.57585552
## 2-Cys       -0.38303058
## 2A6          0.20615339
## 2MMP        -2.21511040
## 3AT1         0.03160659
## 3BETAHSD/D1  1.46973427

Here are some metrics about the input data profile:

Profile metrics
	Profile metrics
num_genesets	959
num_genes_in_profile	26844
duplicated_genes_present	0
num_profile_genes_in_sets	24086
num_profile_genes_not_in_sets	2758

Here is a plot of the input profiles. Note the dynamic ranges.

Here is the contour plot of the profile including all detected genes.

Input genesets

Here are some metrics about the gene sets used: GMT file of genesets: ../ref/Ath_AGI_LOCUS_TAIR10_Aug2012.txt.gmt

Gene sets metrics
	Gene sets metrics
num_genesets	959
num_genesets_excluded	662
num_genesets_included	297

Differential pathway expression

Interactive enrichment scatterplot

Significance is calculated by -log10(p-value). All points shown are FDR<0.05.

Significance is calculated by -log10(p-value). Top N sets shown irrespective of FDR.

Results table

Top N= 50 gene sets

set	setSize	pANOVA	s.dist	p.adjustANOVA
CELL ORGANISATION	374	4.07e-09	0.177	8.59e-07
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-PRO	48	5.78e-09	0.486	8.59e-07
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS	45	9.08e-08	-0.460	8.99e-06
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES	171	8.29e-07	0.218	6.16e-05
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS	18	3.22e-06	-0.634	1.91e-04
CELL VESICLE TRANSPORT	171	1.14e-05	0.194	5.63e-04
CELL WALL CELL WALL PROTEINS AGPS AGP	42	1.48e-05	0.386	6.28e-04
PROTEIN SYNTHESIS RIBOSOMAL RNA	15	2.70e-05	-0.626	9.73e-04
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED	80	2.95e-05	0.270	9.73e-04
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS	76	6.44e-05	-0.265	1.91e-03
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III	44	8.07e-05	0.343	2.18e-03
MISC MYROSINASES-LECTIN-JACALIN	56	1.65e-04	-0.291	4.09e-03
PS LIGHTREACTION NADH DH	12	1.98e-04	-0.620	4.52e-03
CELL WALL CELLULOSE SYNTHESIS	14	2.80e-04	0.561	5.93e-03
CELL WALL CELL WALL PROTEINS HRGP	16	6.17e-04	-0.494	1.22e-02
PS LIGHTREACTION PHOTOSYSTEM II LHC-II	14	7.35e-04	-0.521	1.36e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE	21	1.15e-03	-0.410	1.92e-02
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY	17	1.16e-03	0.455	1.92e-02
TRANSPORT SULPHATE	12	1.83e-03	-0.520	2.73e-02
CELL WALL CELLULOSE SYNTHESIS CELLULOSE SYNTHASE	28	1.84e-03	0.340	2.73e-02
SECONDARY METABOLISM SIMPLE PHENOLS	18	2.34e-03	0.414	3.31e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE	11	2.73e-03	-0.522	3.57e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION	12	2.84e-03	-0.497	3.57e-02
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN	112	2.88e-03	0.163	3.57e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR	34	3.23e-03	-0.292	3.83e-02
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE	26	3.35e-03	0.332	3.83e-02
NOT ASSIGNED NO ONTOLOGY LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN	10	4.02e-03	-0.525	4.36e-02
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE	22	4.11e-03	0.353	4.36e-02
MISC GLUTATHIONE S TRANSFERASES	55	5.83e-03	-0.215	5.97e-02
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS	11	6.14e-03	0.477	5.98e-02
STRESS BIOTIC SIGNALLING	13	6.25e-03	-0.438	5.98e-02
TRANSPORT MAJOR INTRINSIC PROTEINS PIP	13	6.55e-03	0.435	6.08e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI	10	7.59e-03	0.488	6.70e-02
DEVELOPMENT STORAGE PROTEINS	24	7.69e-03	-0.314	6.70e-02
SIGNALLING G-PROTEINS	235	7.89e-03	0.100	6.70e-02
TRANSPORT PEPTIDES AND OLIGOPEPTIDES	58	8.33e-03	0.200	6.87e-02
NOT ASSIGNED NO ONTOLOGY TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN	10	8.99e-03	0.477	7.21e-02
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) SPHINGOLIPIDS	20	1.28e-02	0.322	9.98e-02
PROTEIN SYNTHESIS ELONGATION	30	1.32e-02	-0.261	1.00e-01
RNA REGULATION OF TRANSCRIPTION ABI3/VP1-RELATED B3-DOMAIN-CONTAINING TRANSCRIPTION FACTOR FAMILY	11	1.51e-02	-0.423	1.12e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C	14	1.59e-02	-0.372	1.13e-01
SECONDARY METABOLISM WAX	21	1.60e-02	0.304	1.13e-01
MISC GDSL-MOTIF LIPASE	82	1.64e-02	0.153	1.13e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES	83	1.80e-02	0.150	1.21e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI	14	1.96e-02	0.360	1.29e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN	12	2.32e-02	-0.378	1.47e-01
NOT ASSIGNED NO ONTOLOGY PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN	10	2.32e-02	0.414	1.47e-01
HORMONE METABOLISM ABSCISIC ACID SIGNAL TRANSDUCTION	12	2.51e-02	-0.373	1.51e-01
PROTEIN TARGETING CHLOROPLAST	36	2.51e-02	-0.216	1.51e-01
HORMONE METABOLISM ABSCISIC ACID INDUCED-REGULATED-RESPONSIVE-ACTIVATED	23	2.54e-02	-0.269	1.51e-01

Results (complete table)

Click HERE to show results for all gene sets

Complete results
set	setSize	pANOVA	s.dist	p.adjustANOVA
CELL ORGANISATION	374	4.07e-09	0.17700	8.59e-07
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-PRO	48	5.78e-09	0.48600	8.59e-07
PS LIGHTREACTION PHOTOSYSTEM II PSII POLYPEPTIDE SUBUNITS	45	9.08e-08	-0.46000	8.99e-06
MISC UDP GLUCOSYL AND GLUCORONYL TRANSFERASES	171	8.29e-07	0.21800	6.16e-05
PS LIGHTREACTION PHOTOSYSTEM I PSI POLYPEPTIDE SUBUNITS	18	3.22e-06	-0.63400	1.91e-04
CELL VESICLE TRANSPORT	171	1.14e-05	0.19400	5.63e-04
CELL WALL CELL WALL PROTEINS AGPS AGP	42	1.48e-05	0.38600	6.28e-04
PROTEIN SYNTHESIS RIBOSOMAL RNA	15	2.70e-05	-0.62600	9.73e-04
PROTEIN TARGETING SECRETORY PATHWAY UNSPECIFIED	80	2.95e-05	0.27000	9.73e-04
NOT ASSIGNED NO ONTOLOGY GLYCINE RICH PROTEINS	76	6.44e-05	-0.26500	1.91e-03
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT III	44	8.07e-05	0.34300	2.18e-03
MISC MYROSINASES-LECTIN-JACALIN	56	1.65e-04	-0.29100	4.09e-03
PS LIGHTREACTION NADH DH	12	1.98e-04	-0.62000	4.52e-03
CELL WALL CELLULOSE SYNTHESIS	14	2.80e-04	0.56100	5.93e-03
CELL WALL CELL WALL PROTEINS HRGP	16	6.17e-04	-0.49400	1.22e-02
PS LIGHTREACTION PHOTOSYSTEM II LHC-II	14	7.35e-04	-0.52100	1.36e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS F1-ATPASE	21	1.15e-03	-0.41000	1.92e-02
RNA REGULATION OF TRANSCRIPTION ARF, AUXIN RESPONSE FACTOR FAMILY	17	1.16e-03	0.45500	1.92e-02
TRANSPORT SULPHATE	12	1.83e-03	-0.52000	2.73e-02
CELL WALL CELLULOSE SYNTHESIS CELLULOSE SYNTHASE	28	1.84e-03	0.34000	2.73e-02
SECONDARY METABOLISM SIMPLE PHENOLS	18	2.34e-03	0.41400	3.31e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C REDUCTASE	11	2.73e-03	-0.52200	3.57e-02
PS LIGHTREACTION CYCLIC ELECTRON FLOW-CHLORORESPIRATION	12	2.84e-03	-0.49700	3.57e-02
NOT ASSIGNED NO ONTOLOGY DC1 DOMAIN CONTAINING PROTEIN	112	2.88e-03	0.16300	3.57e-02
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS NADH-DH LOCALISATION NOT CLEAR	34	3.23e-03	-0.29200	3.83e-02
TRANSPORT METABOLITE TRANSPORTERS AT THE ENVELOPE MEMBRANE	26	3.35e-03	0.33200	3.83e-02
NOT ASSIGNED NO ONTOLOGY LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN	10	4.02e-03	-0.52500	4.36e-02
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE	22	4.11e-03	0.35300	4.36e-02
MISC GLUTATHIONE S TRANSFERASES	55	5.83e-03	-0.21500	5.97e-02
SECONDARY METABOLISM FLAVONOIDS FLAVONOLS	11	6.14e-03	0.47700	5.98e-02
STRESS BIOTIC SIGNALLING	13	6.25e-03	-0.43800	5.98e-02
TRANSPORT MAJOR INTRINSIC PROTEINS PIP	13	6.55e-03	0.43500	6.08e-02
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VI	10	7.59e-03	0.48800	6.70e-02
DEVELOPMENT STORAGE PROTEINS	24	7.69e-03	-0.31400	6.70e-02
SIGNALLING G-PROTEINS	235	7.89e-03	0.10000	6.70e-02
TRANSPORT PEPTIDES AND OLIGOPEPTIDES	58	8.33e-03	0.20000	6.87e-02
NOT ASSIGNED NO ONTOLOGY TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN	10	8.99e-03	0.47700	7.21e-02
LIPID METABOLISM EXOTICS (STEROIDS, SQUALENE ETC) SPHINGOLIPIDS	20	1.28e-02	0.32200	9.98e-02
PROTEIN SYNTHESIS ELONGATION	30	1.32e-02	-0.26100	1.00e-01
RNA REGULATION OF TRANSCRIPTION ABI3/VP1-RELATED B3-DOMAIN-CONTAINING TRANSCRIPTION FACTOR FAMILY	11	1.51e-02	-0.42300	1.12e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C	14	1.59e-02	-0.37200	1.13e-01
SECONDARY METABOLISM WAX	21	1.60e-02	0.30400	1.13e-01
MISC GDSL-MOTIF LIPASE	82	1.64e-02	0.15300	1.13e-01
CELL WALL DEGRADATION PECTATE LYASES AND POLYGALACTURONASES	83	1.80e-02	0.15000	1.21e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VI	14	1.96e-02	0.36000	1.29e-01
AMINO ACID METABOLISM DEGRADATION AROMATIC AA TRYPTOPHAN	12	2.32e-02	-0.37800	1.47e-01
NOT ASSIGNED NO ONTOLOGY PAIRED AMPHIPATHIC HELIX REPEAT-CONTAINING PROTEIN	10	2.32e-02	0.41400	1.47e-01
HORMONE METABOLISM ABSCISIC ACID SIGNAL TRANSDUCTION	12	2.51e-02	-0.37300	1.51e-01
PROTEIN TARGETING CHLOROPLAST	36	2.51e-02	-0.21600	1.51e-01
HORMONE METABOLISM ABSCISIC ACID INDUCED-REGULATED-RESPONSIVE-ACTIVATED	23	2.54e-02	-0.26900	1.51e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE HISTONE CORE H2A	14	2.69e-02	-0.34200	1.56e-01
NOT ASSIGNED NO ONTOLOGY HYDROXYPROLINE RICH PROTEINS	62	3.21e-02	-0.15700	1.84e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES ENDOGLUCANASE	14	3.30e-02	0.32900	1.85e-01
PROTEIN TARGETING SECRETORY PATHWAY GOLGI	17	3.49e-02	0.29500	1.92e-01
PROTEIN TARGETING MITOCHONDRIA	34	3.71e-02	-0.20600	1.97e-01
RNA PROCESSING SPLICING	64	3.76e-02	-0.15000	1.97e-01
SIGNALLING PHOSPHINOSITIDES PHOSPHOINOSITIDE PHOSPHOLIPASE C	10	3.78e-02	0.37900	1.97e-01
REDOX ASCORBATE AND GLUTATHIONE	23	4.14e-02	0.24600	2.12e-01
CELL WALL MODIFICATION	61	4.50e-02	0.14800	2.26e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP5	12	4.69e-02	-0.33100	2.29e-01
RNA REGULATION OF TRANSCRIPTION AUX/IAA FAMILY	27	4.81e-02	0.22000	2.29e-01
STRESS ABIOTIC	23	4.82e-02	-0.23800	2.29e-01
PROTEIN ASSEMBLY AND COFACTOR LIGATION	23	4.85e-02	-0.23800	2.29e-01
PROTEIN DEGRADATION UBIQUITIN PROTEASOM	60	5.05e-02	-0.14600	2.34e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION	22	5.36e-02	0.23800	2.42e-01
STRESS ABIOTIC DROUGHT/SALT	71	5.37e-02	0.13200	2.42e-01
REDOX THIOREDOXIN	54	5.46e-02	-0.15100	2.42e-01
PROTEIN TARGETING SECRETORY PATHWAY ER	15	5.68e-02	0.28400	2.48e-01
BIODEGRADATION OF XENOBIOTICS LACTOYLGLUTATHIONE LYASE	10	6.01e-02	-0.34300	2.55e-01
PROTEIN SYNTHESIS RELEASE	10	6.01e-02	-0.34300	2.55e-01
RNA PROCESSING RNA HELICASE	34	6.10e-02	-0.18600	2.55e-01
DNA UNSPECIFIED	96	6.37e-02	-0.10900	2.56e-01
HORMONE METABOLISM CYTOKININ SYNTHESIS-DEGRADATION	17	6.50e-02	0.25800	2.56e-01
TCA / ORG TRANSFORMATION CARBONIC ANHYDRASES	11	6.53e-02	-0.32100	2.56e-01
CELL CYCLE	91	6.60e-02	0.11100	2.56e-01
REDOX THIOREDOXIN PDIL	13	6.86e-02	0.29200	2.56e-01
RNA REGULATION OF TRANSCRIPTION B3 TRANSCRIPTION FACTOR FAMILY	41	6.87e-02	0.16400	2.56e-01
SIGNALLING RECEPTOR KINASES LEGUME-LECTIN	16	6.90e-02	-0.26300	2.56e-01
RNA REGULATION OF TRANSCRIPTION BZIP TRANSCRIPTION FACTOR FAMILY	66	6.94e-02	-0.12900	2.56e-01
STRESS ABIOTIC TOUCH/WOUNDING	14	6.96e-02	-0.28000	2.56e-01
SIGNALLING PHOSPHINOSITIDES PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE	19	6.98e-02	0.24000	2.56e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT II	13	7.09e-02	0.28900	2.56e-01
RNA REGULATION OF TRANSCRIPTION ARR	17	7.24e-02	0.25200	2.56e-01
SIGNALLING CALCIUM	223	7.30e-02	0.06960	2.56e-01
MISC OXIDASES - COPPER, FLAVONE ETC	102	7.32e-02	0.10300	2.56e-01
MINOR CHO METABOLISM CALLOSE	14	7.80e-02	0.27200	2.67e-01
RNA REGULATION OF TRANSCRIPTION HISTONE ACETYLTRANSFERASES	18	7.84e-02	0.24000	2.67e-01
RNA REGULATION OF TRANSCRIPTION BHLH,BASIC HELIX-LOOP-HELIX FAMILY	139	8.15e-02	0.08550	2.75e-01
PROTEIN DEGRADATION UBIQUITIN E3 BTB/POZ CULLIN3 BTB/POZ	11	8.97e-02	0.29500	2.97e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) GATA TRANSCRIPTION FACTOR FAMILY	29	9.01e-02	0.18200	2.97e-01
AMINO ACID METABOLISM SYNTHESIS SERINE-GLYCINE-CYSTEINE GROUP CYSTEINE OASTL	10	9.58e-02	-0.30400	3.13e-01
SIGNALLING RECEPTOR KINASES DUF 26	46	9.96e-02	0.14000	3.22e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-ALA	16	1.01e-01	0.23700	3.23e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF FBOX	451	1.03e-01	-0.04470	3.26e-01
HORMONE METABOLISM AUXIN SYNTHESIS-DEGRADATION	14	1.07e-01	0.24800	3.36e-01
RNA REGULATION OF TRANSCRIPTION PUTATIVE TRANSCRIPTION REGULATOR	157	1.10e-01	0.07390	3.40e-01
TRANSPORT NITRATE	12	1.12e-01	0.26500	3.43e-01
NOT ASSIGNED NO ONTOLOGY PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN	429	1.16e-01	-0.04410	3.50e-01
STRESS ABIOTIC UNSPECIFIED	109	1.17e-01	-0.08700	3.50e-01
MISC PEROXIDASES	69	1.22e-01	-0.10800	3.61e-01
CELL WALL DEGRADATION CELLULASES AND BETA -1,4-GLUCANASES	10	1.23e-01	0.28200	3.61e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP2	10	1.26e-01	0.28000	3.64e-01
PROTEIN TARGETING SECRETORY PATHWAY VACUOLE	31	1.26e-01	0.15900	3.64e-01
LIPID METABOLISM LIPID TRANSFER PROTEINS ETC	15	1.31e-01	-0.22500	3.70e-01
PROTEIN DEGRADATION UBIQUITIN	65	1.32e-01	-0.10800	3.70e-01
TRANSPORT METABOLITE TRANSPORTERS AT THE MITOCHONDRIAL MEMBRANE	65	1.32e-01	-0.10800	3.70e-01
MISC DYNAMIN	12	1.33e-01	0.25000	3.70e-01
PROTEIN GLYCOSYLATION	28	1.34e-01	0.16300	3.70e-01
STRESS ABIOTIC COLD	20	1.37e-01	-0.19200	3.74e-01
RNA REGULATION OF TRANSCRIPTION ZF-HD	15	1.40e-01	-0.22000	3.77e-01
PROTEIN FOLDING	64	1.42e-01	-0.10600	3.78e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-SER	11	1.42e-01	-0.25500	3.78e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNAS	55	1.44e-01	0.11400	3.80e-01
SIGNALLING RECEPTOR KINASES S-LOCUS GLYCOPROTEIN LIKE	24	1.48e-01	-0.17100	3.86e-01
MISC PLASTOCYANIN-LIKE	30	1.52e-01	0.15100	3.90e-01
TRANSPORT CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS	20	1.53e-01	0.18500	3.90e-01
TRANSPORT AMINO ACIDS	62	1.54e-01	0.10500	3.90e-01
RNA REGULATION OF TRANSCRIPTION PHD FINGER TRANSCRIPTION FACTOR	12	1.57e-01	0.23600	3.96e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE IX	17	1.63e-01	0.19600	4.06e-01
NOT ASSIGNED NO ONTOLOGY EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN	21	1.73e-01	0.17200	4.27e-01
NUCLEOTIDE METABOLISM DEGRADATION	32	1.85e-01	0.13500	4.54e-01
RNA RNA BINDING	173	1.87e-01	-0.05810	4.56e-01
MISC GCN5-RELATED N-ACETYLTRANSFERASE	26	2.03e-01	-0.14400	4.85e-01
MISC BETA 1,3 GLUCAN HYDROLASES GLUCAN ENDO-1,3-BETA-GLUCOSIDASE	30	2.04e-01	0.13400	4.85e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS SNORNPS	14	2.04e-01	0.19600	4.85e-01
SIGNALLING LIGHT COP9 SIGNALOSOME	12	2.13e-01	-0.20800	4.99e-01
LIPID METABOLISM EXOTICS(STEROIDS, SQUALENE ETC)	19	2.15e-01	0.16400	4.99e-01
HORMONE METABOLISM AUXIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED	137	2.15e-01	0.06130	4.99e-01
PROTEIN DEGRADATION METALLOPROTEASE	38	2.24e-01	-0.11400	5.13e-01
LIPID METABOLISM PHOSPHOLIPID SYNTHESIS	16	2.24e-01	0.17500	5.13e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-TYR	16	2.28e-01	-0.17400	5.17e-01
MISC BETA 1,3 GLUCAN HYDROLASES	24	2.37e-01	0.13900	5.34e-01
PROTEIN SYNTHESIS INITIATION	81	2.54e-01	-0.07330	5.65e-01
NOT ASSIGNED NO ONTOLOGY C2 DOMAIN-CONTAINING PROTEIN	46	2.55e-01	0.09700	5.65e-01
NOT ASSIGNED NO ONTOLOGY TETRATRICOPEPTIDE REPEAT (TPR)	29	2.60e-01	0.12100	5.73e-01
RNA REGULATION OF TRANSCRIPTION AS2,LATERAL ORGAN BOUNDARIES GENE FAMILY	36	2.62e-01	-0.10800	5.73e-01
STRESS BIOTIC RECEPTORS	19	2.67e-01	0.14700	5.79e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-ASP	22	2.73e-01	0.13500	5.79e-01
PROTEIN DEGRADATION UBIQUITIN E2	40	2.75e-01	-0.09970	5.79e-01
SIGNALLING RECEPTOR KINASES WALL ASSOCIATED KINASE	24	2.77e-01	0.12800	5.79e-01
TRANSPORT P- AND V-ATPASES	30	2.81e-01	0.11400	5.79e-01
PROTEIN DEGRADATION AAA TYPE	42	2.83e-01	-0.09580	5.79e-01
DNA REPAIR	75	2.85e-01	-0.07140	5.79e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XI	28	2.85e-01	-0.11700	5.79e-01
RNA REGULATION OF TRANSCRIPTION MYB DOMAIN TRANSCRIPTION FACTOR FAMILY	150	2.86e-01	0.05050	5.79e-01
MISC O-METHYL TRANSFERASES	21	2.86e-01	0.13400	5.79e-01
CELL WALL CELL WALL PROTEINS LRR	19	2.86e-01	0.14100	5.79e-01
SIGNALLING PHOSPHINOSITIDES	18	2.90e-01	0.14400	5.82e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) DOF ZINC FINGER FAMILY	33	2.93e-01	-0.10600	5.82e-01
RNA REGULATION OF TRANSCRIPTION C3H ZINC FINGER FAMILY	27	2.94e-01	-0.11700	5.82e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS	11	3.03e-01	-0.17900	5.96e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VIII	11	3.10e-01	0.17700	6.05e-01
MISC PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN (LTP) FAMILY PROTEIN	79	3.12e-01	0.06580	6.05e-01
SIGNALLING IN SUGAR AND NUTRIENT PHYSIOLOGY	39	3.14e-01	-0.09320	6.05e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-TRP	13	3.17e-01	-0.16000	6.07e-01
RNA REGULATION OF TRANSCRIPTION C2H2 ZINC FINGER FAMILY	123	3.29e-01	0.05090	6.27e-01
CELL WALL HEMICELLULOSE SYNTHESIS	15	3.32e-01	0.14500	6.28e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-PHE	15	3.38e-01	-0.14300	6.29e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-LYS	15	3.38e-01	-0.14300	6.29e-01
SECONDARY METABOLISM ISOPRENOIDS TERPENOIDS	36	3.39e-01	0.09200	6.29e-01
TRANSPORT PHOSPHATE	26	3.44e-01	0.10700	6.33e-01
REDOX ASCORBATE AND GLUTATHIONE ASCORBATE	17	3.45e-01	-0.13200	6.33e-01
PROTEIN DEGRADATION UBIQUITIN E3 RING	421	3.47e-01	-0.02670	6.33e-01
PROTEIN DEGRADATION SUBTILASES	47	3.55e-01	-0.07800	6.42e-01
NOT ASSIGNED NO ONTOLOGY ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN	33	3.61e-01	-0.09190	6.49e-01
HORMONE METABOLISM AUXIN SIGNAL TRANSDUCTION	24	3.68e-01	0.10600	6.58e-01
PROTEIN POSTRANSLATIONAL MODIFICATION KINASE RECEPTOR LIKE CYTOPLASMATIC KINASE VII	45	3.80e-01	0.07560	6.74e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES	53	3.81e-01	-0.06950	6.74e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE	13	3.91e-01	-0.13700	6.88e-01
TRANSPORT MISC	126	3.97e-01	0.04370	6.91e-01
SECONDARY METABOLISM PHENYLPROPANOIDS	43	4.08e-01	-0.07290	6.91e-01
NUCLEOTIDE METABOLISM PHOSPHOTRANSFER AND PYROPHOSPHATASES MISC	12	4.09e-01	0.13800	6.91e-01
PROTEIN DEGRADATION SERINE PROTEASE	105	4.10e-01	0.04650	6.91e-01
REDOX GLUTAREDOXINS	42	4.15e-01	0.07270	6.91e-01
PROTEIN AA ACTIVATION PSEUDOURIDYLATE SYNTHASE	16	4.16e-01	-0.11800	6.91e-01
RNA REGULATION OF TRANSCRIPTION JUMONJI FAMILY	14	4.16e-01	-0.12600	6.91e-01
RNA REGULATION OF TRANSCRIPTION GEBP LIKE	13	4.16e-01	-0.13000	6.91e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT I	21	4.16e-01	0.10200	6.91e-01
NOT ASSIGNED NO ONTOLOGY PROLINE RICH FAMILY	45	4.19e-01	0.06970	6.91e-01
TRANSPORT POTASSIUM	39	4.19e-01	-0.07480	6.91e-01
STRESS BIOTIC PR-PROTEINS PROTEINASE INHIBITORS TRYPSIN INHIBITOR	10	4.23e-01	0.14600	6.93e-01
RNA REGULATION OF TRANSCRIPTION TCP TRANSCRIPTION FACTOR FAMILY	21	4.25e-01	-0.10100	6.93e-01
STRESS BIOTIC SIGNALLING MLO-LIKE	14	4.27e-01	-0.12300	6.93e-01
HORMONE METABOLISM JASMONATE INDUCED-REGULATED-RESPONSIVE-ACTIVATED	13	4.33e-01	-0.12600	6.96e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION BETA KETOACYL COA SYNTHASE	11	4.36e-01	-0.13600	6.96e-01
SECONDARY METABOLISM N MISC ALKALOID-LIKE	21	4.38e-01	-0.09780	6.96e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS DEXD-BOX HELICASES	14	4.39e-01	0.11900	6.96e-01
MISC INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN	53	4.40e-01	-0.06130	6.96e-01
NOT ASSIGNED NO ONTOLOGY	1633	4.44e-01	0.01130	6.97e-01
HORMONE METABOLISM GIBBERELIN INDUCED-REGULATED-RESPONSIVE-ACTIVATED	15	4.48e-01	0.11300	7.00e-01
RNA REGULATION OF TRANSCRIPTION	14	4.57e-01	-0.11500	7.11e-01
SECONDARY METABOLISM FLAVONOIDS ANTHOCYANINS	11	4.59e-01	-0.12900	7.11e-01
HORMONE METABOLISM ABSCISIC ACID SYNTHESIS-DEGRADATION	11	4.65e-01	0.12700	7.16e-01
DNA SYNTHESIS/CHROMATIN STRUCTURE	223	4.79e-01	0.02750	7.33e-01
HORMONE METABOLISM ETHYLENE SYNTHESIS-DEGRADATION 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE	10	4.94e-01	-0.12500	7.49e-01
SIGNALLING RECEPTOR KINASES CATHARANTHUS ROSEUS-LIKE RLK1	16	4.94e-01	0.09870	7.49e-01
LIPID METABOLISM TAG SYNTHESIS	12	5.04e-01	0.11100	7.59e-01
HORMONE METABOLISM ETHYLENE SIGNAL TRANSDUCTION	33	5.14e-01	-0.06570	7.69e-01
MICRO RNA, NATURAL ANTISENSE ETC	264	5.19e-01	-0.02300	7.69e-01
PROTEIN DEGRADATION	137	5.21e-01	-0.03180	7.69e-01
HORMONE METABOLISM SALICYLIC ACID SYNTHESIS-DEGRADATION	15	5.21e-01	-0.09580	7.69e-01
RNA REGULATION OF TRANSCRIPTION HB,HOMEOBOX TRANSCRIPTION FACTOR FAMILY	82	5.27e-01	0.04040	7.72e-01
DEVELOPMENT SQUAMOSA PROMOTER BINDING LIKE (SPL)	17	5.31e-01	0.08770	7.72e-01
RNA REGULATION OF TRANSCRIPTION AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY	105	5.32e-01	-0.03520	7.72e-01
CELL WALL DEGRADATION MANNAN-XYLOSE-ARABINOSE-FUCOSE	18	5.33e-01	-0.08500	7.72e-01
SIGNALLING RECEPTOR KINASES MISC	90	5.40e-01	0.03730	7.79e-01
TRANSPORT UNSPECIFIED ANIONS	16	5.45e-01	0.08730	7.82e-01
RNA PROCESSING	122	5.53e-01	-0.03110	7.89e-01
TRANSPORT CALCIUM	21	5.59e-01	-0.07370	7.93e-01
PROTEIN DEGRADATION ASPARTATE PROTEASE	34	5.60e-01	-0.05770	7.93e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT VIII VIII-2	15	5.66e-01	0.08550	7.97e-01
MINOR CHO METABOLISM OTHERS	40	5.70e-01	-0.05190	7.98e-01
RNA REGULATION OF TRANSCRIPTION NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP	14	5.79e-01	-0.08570	8.04e-01
RNA REGULATION OF TRANSCRIPTION CCAAT BOX BINDING FACTOR FAMILY, HAP3	10	5.81e-01	0.10100	8.04e-01
STRESS BIOTIC PR-PROTEINS	206	5.82e-01	-0.02220	8.04e-01
METAL HANDLING ACQUISITION	10	5.87e-01	0.09930	8.07e-01
PROTEIN TARGETING NUCLEUS	48	5.90e-01	-0.04490	8.08e-01
RNA REGULATION OF TRANSCRIPTION SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY	36	5.96e-01	-0.05110	8.11e-01
PROTEIN SYNTHESIS RIBOSOMAL PROTEIN EUKARYOTIC 60S SUBUNIT L34	10	5.98e-01	-0.09640	8.11e-01
SIGNALLING MISC	22	6.04e-01	-0.06380	8.16e-01
RNA REGULATION OF TRANSCRIPTION MADS BOX TRANSCRIPTION FACTOR FAMILY	72	6.17e-01	-0.03410	8.29e-01
STRESS BIOTIC	168	6.23e-01	0.02200	8.33e-01
RNA REGULATION OF TRANSCRIPTION UNCLASSIFIED	301	6.26e-01	-0.01630	8.33e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES	12	6.29e-01	0.08060	8.34e-01
SECONDARY METABOLISM FLAVONOIDS DIHYDROFLAVONOLS	18	6.33e-01	0.06490	8.36e-01
RNA REGULATION OF TRANSCRIPTION MYB-RELATED TRANSCRIPTION FACTOR FAMILY	44	6.39e-01	0.04090	8.40e-01
CELL CYCLE PEPTIDYLPROLYL ISOMERASE	32	6.43e-01	-0.04730	8.41e-01
MAJOR CHO METABOLISM DEGRADATION SUCROSE FRUCTOKINASE	10	6.47e-01	0.08350	8.41e-01
C1-METABOLISM	11	6.48e-01	-0.07940	8.41e-01
NOT ASSIGNED UNKNOWN	5709	6.56e-01	-0.00384	8.43e-01
RNA REGULATION OF TRANSCRIPTION TRIHELIX, TRIPLE-HELIX TRANSCRIPTION FACTOR FAMILY	30	6.57e-01	-0.04690	8.43e-01
RNA REGULATION OF TRANSCRIPTION ZN-FINGER(CCHC)	10	6.58e-01	0.08080	8.43e-01
LIPID METABOLISM FA SYNTHESIS AND FA ELONGATION ACYL COA LIGASE	21	6.66e-01	0.05440	8.45e-01
MISC GLUCO-, GALACTO- AND MANNOSIDASES BETA-GALACTOSIDASE	16	6.69e-01	-0.06170	8.45e-01
RNA REGULATION OF TRANSCRIPTION PHOR1	11	6.72e-01	-0.07360	8.45e-01
TRANSPORT UNSPECIFIED CATIONS	42	6.75e-01	0.03740	8.45e-01
RNA REGULATION OF TRANSCRIPTION NAC DOMAIN TRANSCRIPTION FACTOR FAMILY	20	6.75e-01	-0.05410	8.45e-01
NUCLEOTIDE METABOLISM SALVAGE NUDIX HYDROLASES	25	6.77e-01	0.04810	8.45e-01
PROTEIN POSTRANSLATIONAL MODIFICATION	541	6.80e-01	0.01030	8.45e-01
STRESS BIOTIC PR-PROTEINS PLANT DEFENSINS	43	6.91e-01	0.03500	8.56e-01
MISC MISC2	28	6.97e-01	-0.04250	8.56e-01
RNA REGULATION OF TRANSCRIPTION SNF7	12	6.98e-01	0.06470	8.56e-01
MINOR CHO METABOLISM TREHALOSE TPP	10	7.03e-01	-0.06960	8.57e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-GLY	27	7.08e-01	0.04170	8.57e-01
RNA REGULATION OF TRANSCRIPTION G2-LIKE TRANSCRIPTION FACTOR FAMILY, GARP	40	7.10e-01	-0.03390	8.57e-01
SIGNALLING LIGHT	92	7.11e-01	-0.02240	8.57e-01
NOT ASSIGNED NO ONTOLOGY FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN	18	7.13e-01	-0.05020	8.57e-01
SIGNALLING 14-3-3 PROTEINS	12	7.20e-01	0.05970	8.63e-01
PROTEIN TARGETING PEROXISOMES	10	7.30e-01	-0.06300	8.71e-01
RNA TRANSCRIPTION	93	7.36e-01	-0.02020	8.74e-01
PROTEIN SYNTHESIS RIBOSOME BIOGENESIS PRE-RRNA PROCESSING AND MODIFICATIONS METHYLOTRANSFERASES	17	7.45e-01	-0.04560	8.81e-01
STRESS ABIOTIC HEAT	176	7.53e-01	-0.01370	8.88e-01
RNA REGULATION OF TRANSCRIPTION HDA	18	7.60e-01	-0.04170	8.89e-01
CO-FACTOR AND VITAMINE METABOLISM	15	7.61e-01	0.04530	8.89e-01
PROTEIN DEGRADATION CYSTEINE PROTEASE	57	7.64e-01	-0.02300	8.89e-01
PROTEIN DEGRADATION UBIQUITIN E3 SCF SKP	20	7.68e-01	0.03800	8.92e-01
PROTEIN DEGRADATION AUTOPHAGY	22	7.77e-01	-0.03490	8.98e-01
HORMONE METABOLISM ETHYLENE INDUCED-REGULATED-RESPONSIVE-ACTIVATED	25	7.89e-01	-0.03080	9.05e-01
RNA REGULATION OF TRANSCRIPTION GENERAL TRANSCRIPTION	32	7.90e-01	-0.02720	9.05e-01
LIPID METABOLISM LIPID DEGRADATION LIPASES TRIACYLGLYCEROL LIPASE	30	7.92e-01	-0.02780	9.05e-01
MISC ACID AND OTHER PHOSPHATASES	65	7.97e-01	-0.01840	9.05e-01
BIODEGRADATION OF XENOBIOTICS	11	8.05e-01	-0.04300	9.05e-01
SECONDARY METABOLISM ISOPRENOIDS NON-MEVALONATE PATHWAY GERANYLGERANYL PYROPHOSPHATE SYNTHASE	11	8.05e-01	0.04290	9.05e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT X	12	8.08e-01	-0.04050	9.05e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN	36	8.09e-01	-0.02330	9.05e-01
RNA PROCESSING RIBONUCLEASES	52	8.11e-01	-0.01920	9.05e-01
LIPID METABOLISM LIPID DEGRADATION LYSOPHOSPHOLIPASES PHOSPHOLIPASE D	12	8.19e-01	-0.03810	9.11e-01
PROTEIN SYNTHESIS TRANSFER RNA NUCLEUS TRNA-VAL	13	8.24e-01	0.03560	9.13e-01
DEVELOPMENT UNSPECIFIED	656	8.33e-01	0.00481	9.14e-01
SIGNALLING MAP KINASES	48	8.34e-01	-0.01750	9.14e-01
MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS CYTOCHROME C OXIDASE	28	8.34e-01	-0.02280	9.14e-01
RNA REGULATION OF TRANSCRIPTION PWWP DOMAIN PROTEIN	11	8.52e-01	-0.03240	9.31e-01
RNA REGULATION OF TRANSCRIPTION C2C2(ZN) CO-LIKE, CONSTANS-LIKE ZINC FINGER FAMILY	29	8.58e-01	0.01920	9.32e-01
RNA REGULATION OF TRANSCRIPTION CHROMATIN REMODELING FACTORS	37	8.62e-01	0.01650	9.32e-01
REDOX ASCORBATE AND GLUTATHIONE GLUTATHIONE	13	8.64e-01	0.02750	9.32e-01
RNA REGULATION OF TRANSCRIPTION METHYL BINDING DOMAIN PROTEINS	10	8.66e-01	-0.03090	9.32e-01
DEVELOPMENT LATE EMBRYOGENESIS ABUNDANT	27	8.70e-01	0.01830	9.32e-01
RNA REGULATION OF TRANSCRIPTION HSF,HEAT-SHOCK TRANSCRIPTION FACTOR FAMILY	21	8.89e-01	-0.01750	9.50e-01
METAL HANDLING	10	8.99e-01	-0.02320	9.52e-01
NOT ASSIGNED NO ONTOLOGY PUMILIO/PUF RNA-BINDING DOMAIN-CONTAINING PROTEIN	16	9.02e-01	-0.01770	9.52e-01
RNA REGULATION OF TRANSCRIPTION GLOBAL TRANSCRIPTION FACTOR GROUP	14	9.05e-01	-0.01840	9.52e-01
TRANSPORT ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS	126	9.10e-01	-0.00585	9.52e-01
SIGNALLING RECEPTOR KINASES PROLINE EXTENSIN LIKE	19	9.11e-01	0.01480	9.52e-01
TRANSPORT METAL	84	9.12e-01	0.00694	9.52e-01
SIGNALLING RECEPTOR KINASES WHEAT LRK10 LIKE	12	9.14e-01	-0.01800	9.52e-01
CELL DIVISION	95	9.24e-01	0.00567	9.59e-01
MISC SHORT CHAIN DEHYDROGENASE/REDUCTASE (SDR)	59	9.37e-01	0.00596	9.70e-01
TRANSPORT SUGARS	66	9.58e-01	-0.00371	9.83e-01
TRANSPORT NUCLEOTIDES	23	9.60e-01	0.00597	9.83e-01
SIGNALLING RECEPTOR KINASES LEUCINE RICH REPEAT XII	10	9.63e-01	-0.00845	9.83e-01
MISC CYTOCHROME P450	210	9.65e-01	0.00174	9.83e-01
REDOX DISMUTASES AND CATALASES	13	9.67e-01	-0.00671	9.83e-01
NOT ASSIGNED NO ONTOLOGY AGENET DOMAIN-CONTAINING PROTEIN	16	9.76e-01	-0.00435	9.88e-01
PROTEIN DEGRADATION UBIQUITIN UBIQUITIN PROTEASE	22	9.80e-01	0.00315	9.88e-01
RNA REGULATION OF TRANSCRIPTION WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY	71	9.83e-01	-0.00145	9.88e-01
METAL HANDLING BINDING, CHELATION AND STORAGE	52	9.85e-01	0.00152	9.88e-01
NOT ASSIGNED NO ONTOLOGY ABC1 FAMILY PROTEIN	11	9.95e-01	-0.00105	9.95e-01

Detailed Gene set reports

CELL_ORGANISATION

CELL_ORGANISATION
	9
set	CELL_ORGANISATION
setSize	374
pANOVA	4.07e-09
s.dist	0.177
p.adjustANOVA	8.59e-07

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT5G37590	13389
AT5G20470	13348
KIN7N	13278
KIN14G	13222
AT5G17410	13175
AT1G11740	13047
KIN5B	12989
MAP65-6	12988
MAP65-8	12937
ACT11	12878
AT1G64330	12813
FIM5	12785
TPR10	12750
ATMAP70-2	12700
ANN3	12548
TUBB7	12510
KIN14T	12491
VLN3	12379
AT3G12020	12322
TUBA3	12309

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT5G37590	13389.0
AT5G20470	13348.0
KIN7N	13278.0
KIN14G	13222.0
AT5G17410	13175.0
AT1G11740	13047.0
KIN5B	12989.0
MAP65-6	12988.0
MAP65-8	12937.0
ACT11	12878.0
AT1G64330	12813.0
FIM5	12785.0
TPR10	12750.0
ATMAP70-2	12700.0
ANN3	12548.0
TUBB7	12510.0
KIN14T	12491.0
VLN3	12379.0
AT3G12020	12322.0
TUBA3	12309.0
AT4G31340	12298.0
XIF	12288.0
XI-E	12211.0
KLCR2	12154.0
AT4G26660	12133.0
XI-K	12084.0
ARP6	12060.0
TUBA4	12023.0
AT3G45850	11990.0
ABIL1	11979.0
HIPL1	11867.0
AtPP2-A12	11859.0
KIN4A	11846.0
AT4G39320	11836.0
KIN12F	11833.0
XI-G	11772.0
AT1G24460	11755.0
MAP65-3	11746.0
AT5G54620	11624.0
AT3G05520	11555.0
ARP4	11553.0
ACT4	11455.0
PEX3	11378.0
CIP7	11338.0
GCP4	11289.0
VLN2	11281.0
AtPP2-B12	11187.0
AT3G24530	11147.0
MAP65-2	11076.0
KIN10A	11055.0
PP2B15	11013.0
FIM3	10985.0
TON2	10968.0
KCA2	10902.0
AT2G42170	10850.0
NPR6	10848.0
AT1G18410	10802.0
KIN12E	10724.0
KIN7B	10677.0
AT1G11160	10639.0
ARPC1A	10555.0
KIN13B	10465.0
POK1	10462.0
BRK1	10455.0
TUBG1	10375.0
AT2G28620	10352.0
KIN7F	10323.0
ARPC1B	10280.0
AT5G07890	10175.0
ADF1	10135.0
KIN14U	10133.0
TUBA6	10117.0
SPK1	10102.0
PMI1	10089.0
SKIP6	10059.0
KIN14I	10016.0
TUBB3	10008.0
PRO4	9987.0
KIN14M	9974.0
VIII-2	9951.0
KIN13A	9937.0
AT3G10310	9935.0
XBAT34	9856.0
KLCR1	9842.0
MAP70.5	9817.0
VLN1	9813.0
FIM2	9807.0
AT3G51930	9802.0
XI-A	9769.0
AT2G22610	9731.0
AAA1	9599.0
AT1G20060	9549.0
AT1G51405	9513.0
AT1G64320	9457.0
TUBB8	9451.0
XI-I	9430.0
ACT12	9420.0
XI-C	9419.0
KIN7I	9345.0
TFCE	9336.0
MOR1	9328.0
AT4G05040	9322.0
MYA2	9318.0
TUBG2	9194.0
RIP4	9103.0
XBAT32	9102.0
GCP3	9100.0
KIN4B	9046.0
TUBB6	9021.0
SCAR2	9013.0
PAP11	8998.0
AT1G14480	8991.0
AT4G11000	8944.0
ARP3	8881.0
FIM1	8858.0
AT5G65860	8708.0
MAP70.1	8633.0
XI-1	8611.0
AT3G24210	8541.0
ZWI	8439.0
FIP37	8421.0
AT1G20400	8328.0
emb1427	8269.0
ADF8	8256.0
AT4G03470	8213.0
AT4G03620	8167.0
PIR	8084.0
ANNAT7	8064.0
AT4G03480	7877.0
KIN14D	7739.0
AT1G04780	7672.0
FIM4	7604.0
ACT8	7599.0
AT5G60930	7551.0
CIP8	7453.0
ARK2	7437.0
XBAT33	7263.0
PRO2	7201.0
ARPC4	7176.0
ANNAT8	6953.0
MAP65-4	6825.0
PRO3	6824.0
PP2B5	6735.0
SCAB3	6704.0
AT1G77550	6658.0
PAP12	6642.0
XI-H	6549.0
KIN7D	6543.0
AT2G34560	6419.0
AT5G06670	6375.0
KIN8B	6227.0
AT4G03450	6138.0
AT3G63480	5993.0
KIN12B	5964.0
PRO1	5788.0
PP2B6	5749.0
AT3G54070	5693.5
KIN7H	5647.0
ADF5	5604.0
AT2G03430	5578.0
ARP5	5549.0
NPR5	5469.0
ANN2	5426.0
TUBA1	5395.0
MPB2C	5347.0
ATMAP65-1	5216.0
AT4G27360	5046.0
AT2G42230	5044.0
ADF2	5026.0
AT2G04740	4973.0
PEX11A	4944.0
WDL1	4737.0
KIN7C	4634.0
PIA1	4632.0
AT5G53310	4626.0
AT5G59210	4609.0
TUBB4	4580.0
PP2B8	4578.0
PIA2	4540.0
TFCC	4479.0
XI-J	4446.0
AT3G43610	4402.0
AT5G07740	4383.0
AKR2	4310.0
ADF4	4230.0
EB1B	4211.0
ACT7	4172.0
AT1G72250	4142.0
AT2G46250	3862.0
TULP1	3842.0
AT1G14500	3809.0
ARK3	3763.0
MAP65-7	3712.0
XBAT31	3694.0
KIN14N	3504.0
ACT2	3431.0
XI-B	3315.0
AT1G05640	3241.0
AT5G20110	3232.0
VLN4	2829.0
KIN7M	2708.0
PAP1	2689.0
AT1G09170	2658.0
KIN14C	2527.0
TUBB9	2506.0
AT5G12320	2465.0
ATKP1	2394.0
AT3G18670	2329.0
KIN14S	2211.0
TULP4	2186.0
ADF11	2166.0
NDP1	2048.0
TULP11	1936.0
KIN12D	1731.0
AT4G19400	1718.0
HOP2	1575.0
TUBB1	1533.0
AT5G55520	1236.0
MEE13	1225.0
AT4G15930	1138.0
AT3G28880	1097.0
AT4G17210	1000.0
KIN7E	864.0
TUBB5	846.0
SCAR1	817.0
AR791	733.0
WPP2	696.0
AT2G36200	687.0
AT5G54720	373.0
ATM1	346.0
AT5G41780	201.0
MAP65-9	114.0
PP2B13	56.0
ATARP4A	-10.0
AT1G03670	-163.0
PAP2	-219.0
AT4G10720	-320.0
ANN4	-413.0
TFCB	-934.0
BAD1	-956.0
VIII-A	-1036.0
KIN2	-1055.0
AT5G54710	-1063.0
PP2A14	-1067.0
EB1C	-1087.0
FPP1	-1096.0
AT5G41310	-1098.0
AT3G09550	-1566.0
SCAR3	-1639.0
PAP6	-1701.0
AT5G33300	-1725.0
AT5G42490	-1743.0
AT2G24600	-1792.0
AT5G53080	-1858.0
AT5G02370	-1996.0
MAP70-3	-2172.0
KINUC	-2362.0
VLN5	-2411.0
TON1B	-2479.0
AT1G71790	-2575.0
ARPC2A	-2655.0
XI-D	-2669.0
SKIP3	-3003.0
PRO5	-3029.0
KIN7A	-3056.0
AT1G62050	-3100.0
ARPC5B	-3123.0
AT4G14390	-3323.0
PP2A11	-3422.0
PEX11C	-3466.0
PEX19-1	-3685.0
VIP1	-3746.0
ADF3	-3753.0
AT4G03440	-3874.0
AT1G20570	-4007.0
KCA1	-4028.0
OBE2	-4082.0
NPR4	-4187.0
AT5G14230	-4233.0
KIN7G	-4309.0
PP2A15	-4389.0
ARP7	-4471.0
AT5G51160	-4535.0
ITN1	-4701.0
KIN7O	-4722.0
AT2G01680	-4860.0
AT4G19150	-5025.0
AT3G50390	-5081.0
AT1G63640	-5116.0
PAP10	-5129.0
ATG6	-5207.0
BOB1	-5383.0
NPR3	-5489.0
KIN8A	-5610.0
AT5G54700	-5655.0
AT4G34380	-5754.0
PEX19-2	-5912.0
AT1G23220	-6001.0
VIIIB	-6215.0
AT3G04140	-6258.0
AT1G07710	-6273.0
EB1A	-6275.0
AT3G16120	-6301.0
PEX11B	-6348.0
ANK1	-6411.0
ACT9	-6462.0
ATG8E	-6631.0
KIN14P	-6838.0
AT4G15885	-7052.5
AT5G32590	-7052.5
AT3G01890	-7100.0
ANN6	-7137.0
AT3G01750	-7176.0
AT4G18950	-7181.0
AKRP	-7198.0
AT1G34050	-7241.0
AT4G03490	-7368.0
PLP3A	-7463.0
AT5G15500	-7514.0
VBF	-7524.0
PAP4	-8052.0
PEX11E	-8185.0
ICR2	-8358.0
AT1G49940	-8389.0
TON1A	-8475.0
AT4G03460	-8603.0
XBAT35	-8639.0
AT1G05320	-8862.0
TULP2	-8900.0
MAP70.4	-8957.0
ANN1	-9134.0
AT5G20450	-9165.0
ADF9	-9274.0
AT5G23910	-9387.0
ATG8D	-9551.0
WAP	-9683.0
AT3G57890	-9713.0
ARPC3	-9802.0
AT3G13190	-9818.0
PAP3	-9853.0
AT1G10340	-9893.0
MEE66	-9965.0
AT1G15730	-10187.0
ACT1	-10441.0
PP2B2	-10614.0
AT5G10890	-10679.0
KIN12A	-10758.0
TFCD	-10783.0
FH8	-10835.0
ARP2	-10910.0
EMB506	-11216.0
AT1G27500	-11538.0
AT3G26080	-11592.0
AT3G09890	-11612.0
CEN2	-11686.0
AT2G26210	-11703.0
TULP10	-11733.0
ADF6	-11895.0
PAP7	-11929.0
AT5G57210	-11939.0
MAP65-5	-12091.0
SCAR4	-12098.0
ARP8	-12155.0
AT2G31820	-12242.0
WVD2	-12309.0
ARPC5A	-12504.0
PP2B1	-12519.0
ATFH4	-12580.0
AT4G26120	-12604.0
AT4G08580	-12857.0
PMD2	-12896.0
PAP8	-12917.0
PAT24	-13089.0
ARPC2B	-13221.0

PROTEIN_SYNTHESIS_TRANSFER_RNA_NUCLEUS_TRNA-PRO

PROTEIN_SYNTHESIS_TRANSFER_RNA_NUCLEUS_TRNA-PRO
	152
set	PROTEIN_SYNTHESIS_TRANSFER_RNA_NUCLEUS_TRNA-PRO
setSize	48
pANOVA	5.78e-09
s.dist	0.486
p.adjustANOVA	8.59e-07

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT1G28740	9274.5
AT1G28750	9274.5
AT1G28770	9274.5
AT1G28780	9274.5
AT1G28790	9274.5
AT1G28800	9274.5
AT1G28810	9274.5
AT1G28830	9274.5
AT1G28840	9274.5
AT1G28850	9274.5
AT1G28860	9274.5
AT1G28880	9274.5
AT1G28890	9274.5
AT1G28900	9274.5
AT1G28910	9274.5
AT1G28920	9274.5
AT1G28930	9274.5
AT1G28940	9274.5
AT1G28950	9274.5
AT1G28970	9274.5

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT1G28740	9274.5
AT1G28750	9274.5
AT1G28770	9274.5
AT1G28780	9274.5
AT1G28790	9274.5
AT1G28800	9274.5
AT1G28810	9274.5
AT1G28830	9274.5
AT1G28840	9274.5
AT1G28850	9274.5
AT1G28860	9274.5
AT1G28880	9274.5
AT1G28890	9274.5
AT1G28900	9274.5
AT1G28910	9274.5
AT1G28920	9274.5
AT1G28930	9274.5
AT1G28940	9274.5
AT1G28950	9274.5
AT1G28970	9274.5
AT1G28980	9274.5
AT1G45234	9274.5
AT1G45238	9274.5
AT1G45240	9274.5
AT1G45242	9274.5
AT1G45244	9274.5
AT1G45246	9274.5
AT2G33890	9274.5
AT2G33900	9274.5
AT2G33910	9274.5
AT2G33930	9274.5
AT2G33940	9274.5
AT2G33970	9274.5
AT3G06335	9274.5
AT2G33950	7290.5
AT2G07762	5420.0
AT2G21360	1853.0
AT3G11505	1853.0
AT4G36245	1853.0
AT1G20420	-1694.5
AT3G27825	-1694.5
AT3G27845	-1694.5
AT4G26225	-1694.5
AT4G29415	-1694.5
AT5G18755	-1694.5
AT5G46105	-1694.5
AT5G56745	-1694.5
AT1G28820	-8824.0

PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS

PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS
	168
set	PS_LIGHTREACTION_PHOTOSYSTEM_II_PSII_POLYPEPTIDE_SUBUNITS
setSize	45
pANOVA	9.08e-08
s.dist	-0.46
p.adjustANOVA	8.99e-06

Top enriched genes

Top 20 genes
GeneID	Gene Rank
PSBI	-13300
PSB27-1	-13117
PSBM	-12247
PSBQ2	-12136
PSBO2	-12063
PSBC	-12051
PSBO1	-12020
PSBF	-11711
PSBTN	-11381
AT1G51400	-11220
PSBQ1	-11193
PSBW	-11123
PNSL3	-10884
PSB27-2	-10770
PSBY	-10760
PSBN	-10749
PSBP1	-10464
PSBD	-10242
PSBX	-9839
PSBK	-9729

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
PSBI	-13300
PSB27-1	-13117
PSBM	-12247
PSBQ2	-12136
PSBO2	-12063
PSBC	-12051
PSBO1	-12020
PSBF	-11711
PSBTN	-11381
AT1G51400	-11220
PSBQ1	-11193
PSBW	-11123
PNSL3	-10884
PSB27-2	-10770
PSBY	-10760
PSBN	-10749
PSBP1	-10464
PSBD	-10242
PSBX	-9839
PSBK	-9729
PNSL1	-9623
PSB28	-9481
AT5G11450	-8734
PSBR	-8140
PSBS	-7756
OHP1	-7317
PPD3	-6642
LPA2	-6430
PSBE	-5761
PNSL2	-5605
PSBB	-5505
PPL1	-5276
PQL3	-4918
PPD4	-3546
PPD1	-3341
AT4G37230	-2491
PPD2	-1139
PSBT	546
PSBZ	1107
PSBA	4755
PSBP2	6716
PPD6	7247
PSBH	9218
PSBL	10155
PSBJ	10475

MISC_UDP_GLUCOSYL_AND_GLUCORONYL_TRANSFERASES

MISC_UDP_GLUCOSYL_AND_GLUCORONYL_TRANSFERASES
	83
set	MISC_UDP_GLUCOSYL_AND_GLUCORONYL_TRANSFERASES
setSize	171
pANOVA	8.29e-07
s.dist	0.218
p.adjustANOVA	6.16e-05

Top enriched genes

Top 20 genes
GeneID	Gene Rank
GLCAT14B	13307
UGT76F1	13196
GAUT13	13189
UGT76E5	13144
GAUT14	12943
UGT76E3	12928
GAUT4	12905
GATL5	12880
AT4G01210	12685
UGT76E1	12589
B3GALT12	12538
AT1G73160	12523
AT3G57630	12487
GATL9	12486
GT16	12390
AT2G32750	12386
AT1G19710	12340
AT1G78800	12052
UGT76C3	12016
UGT90A2	11993

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
GLCAT14B	13307.0
UGT76F1	13196.0
GAUT13	13189.0
UGT76E5	13144.0
GAUT14	12943.0
UGT76E3	12928.0
GAUT4	12905.0
GATL5	12880.0
AT4G01210	12685.0
UGT76E1	12589.0
B3GALT12	12538.0
AT1G73160	12523.0
AT3G57630	12487.0
GATL9	12486.0
GT16	12390.0
AT2G32750	12386.0
AT1G19710	12340.0
AT1G78800	12052.0
UGT76C3	12016.0
UGT90A2	11993.0
UGT72E3	11919.0
GLCAT14C	11858.0
GATL6	11817.0
AT3G46650	11684.0
B3GALT4	11682.0
UGT79B10	11472.0
AT5G59070	11445.0
AT1G21480	11387.0
IRX10	11353.0
GATL8	11344.0
AT1G61050	11342.0
AT1G71070	11306.0
AT5G25820	11278.0
AT4G38040	11252.0
GAUT10	11189.0
AT4G32790	10911.0
EPC1	10682.0
AT5G11610	10661.0
GT7	10629.0
AT1G67410	10622.0
AT3G24040	10425.0
UGT75B2	10349.0
GAUT6	10312.0
GAUT9	10213.0
AT1G52420	10142.0
AT2G44660	9882.0
XXT2	9778.0
XXT3	9764.0
AT5G19670	9484.0
UGT73C4	9434.0
UGT74D1	9324.0
AT1G74680	8793.0
UGT84B1	8668.5
UGT73C7	8663.0
UNE7	8661.0
AT5G11130	8533.0
UGT76E7	8232.0
UGT86A2	8059.0
GLCAT14A	7682.0
AT5G60700	7230.0
AT2G39630	7199.0
UGT76E9	7017.0
GT13	6978.0
XXT4	6777.0
UGT85A5	6701.0
UGT89A2	6526.0
UGT76E11	6501.0
UGT78D4	6436.0
UGT78D3	6303.0
HPGT2	6087.0
AT5G38460	6067.0
UGT76E12	6019.0
UGT76B1	5924.0
GT14	5764.0
UGT84A4	5726.0
XXT1	5608.0
XXT5	5589.0
UGT76E6	4989.0
GAUT7	4542.0
GAUT3	4534.0
GATL3	4363.0
GALT4	4291.0
AT5G37000	4288.0
GATL7	3745.0
GAUT2	3508.0
UGT73B1	3013.0
AT1G03520	2945.0
UGT84A3	2944.0
AT4G19900	2645.0
AT1G80290	2601.0
UGT76E4	2564.0
IRX14H	2528.0
XLT2	2474.0
UGT86A1	2433.0
UGT71D2	2358.0
UGT73C2	2253.0
GT19	2111.0
ARAD1	2091.0
AT4G27480	2061.0
UGT71C5	2045.0
AT1G51210	1853.0
UGT75D1	1594.0
AT3G09020	1275.0
UGT75C1	739.0
AT2G30150	693.0
UGT76C5	671.0
UGT76F2	619.0
GAUT15	445.0
B3GALT1	409.0
IRX10L	-36.0
GT17	-83.0
UGT85A2	-182.0
UGT74E1	-350.0
AT2G29040	-509.0
UGT85A4	-789.0
UGT85A3	-871.0
UGT90A1	-1167.0
UGT71B1	-1222.0
UGT73C3	-1346.0
AT2G23210	-1444.0
GALT6	-1611.0
AT5G01250	-1689.0
AT1G53100	-2007.0
UGT87A2	-2218.0
AT4G03340	-2243.0
UGT84A2	-2248.0
AT2G38150	-2366.0
UGT71C4	-2392.0
UGT88A1	-2430.0
AT2G18560	-2706.0
GATL2	-2750.0
UGT83A1	-2819.0
UGT79B2	-3338.0
AT3G15940	-3668.0
ARAD2	-3803.0
UGT73B3	-4050.0
GLCNAC1PUT2	-4107.0
AT2G31990	-4552.0
AT5G37950	-4783.0
UGT89B1	-5237.0
AT1G34270	-5402.0
UGT76E2	-5814.0
EDA5	-6024.0
AT4G38310	-7125.0
UGT84A1	-7328.0
AT3G15350	-7333.0
AT4G15260	-7395.0
UGT71C3	-7448.0
GT6	-7710.0
UGT71B2	-7778.0
UGT74C1	-7825.0
UGT76C4	-8152.0
AT5G14860	-8768.0
UGT71B7	-8894.0
UGT84B2	-8994.0
UGT85A7	-9300.0
AT4G16710	-9555.0
AT4G15270	-9585.0
GAUT11	-9619.0
UGT73B4	-9682.0
UGT76D1	-10185.0
AT5G04500	-10376.0
UGT71B5	-10416.0
UGT92A1	-10423.0
UGT73B5	-11102.0
UGT71B8	-11214.0
GAUT5	-11917.0
UGT82A1	-12087.0
AT4G16745	-12767.0
UGT73D1	-12983.0
UGT72C1	-13021.0

PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS

PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS
	169
set	PS_LIGHTREACTION_PHOTOSYSTEM_I_PSI_POLYPEPTIDE_SUBUNITS
setSize	18
pANOVA	3.22e-06
s.dist	-0.634
p.adjustANOVA	0.000191

Top enriched genes

Top 20 genes
GeneID	Gene Rank
PSAJ	-13118
PSAH1	-12564
PSAE1	-11965
PSAD1	-11816
PSAK	-10502
PSAN	-10471
PSAO	-10179
PSAL	-10120
PSAC	-9206
PSAG	-9019
PSAH2	-9004
CURT1B	-8987
PSAE2	-7563
PSAA	-6632
PSAF	-5309
PSAD2	-5217
PSAB	-4268
PSAI	2543

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
PSAJ	-13118
PSAH1	-12564
PSAE1	-11965
PSAD1	-11816
PSAK	-10502
PSAN	-10471
PSAO	-10179
PSAL	-10120
PSAC	-9206
PSAG	-9019
PSAH2	-9004
CURT1B	-8987
PSAE2	-7563
PSAA	-6632
PSAF	-5309
PSAD2	-5217
PSAB	-4268
PSAI	2543

CELL_VESICLE_TRANSPORT

CELL_VESICLE_TRANSPORT
	10
set	CELL_VESICLE_TRANSPORT
setSize	171
pANOVA	1.14e-05
s.dist	0.194
p.adjustANOVA	0.000563

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NPSN13	13313
SYP43	13154
TOL8	13117
AT2G18860	13099
SYP132	13074
VAMP714	13063
ORP1A	12823
SYP52	12784
GC4	12757
AP5M	12755
RIC4	12698
TOL6	12436
VPS41	12387
SEC10a	12383
GC3	12197
AT1G16225	12149
AT1G16230	12063
ATEXO70D1	12033
ORP1C	11947
SYP131	11935

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NPSN13	13313.0
SYP43	13154.0
TOL8	13117.0
AT2G18860	13099.0
SYP132	13074.0
VAMP714	13063.0
ORP1A	12823.0
SYP52	12784.0
GC4	12757.0
AP5M	12755.0
RIC4	12698.0
TOL6	12436.0
VPS41	12387.0
SEC10a	12383.0
GC3	12197.0
AT1G16225	12149.0
AT1G16230	12063.0
ATEXO70D1	12033.0
ORP1C	11947.0
SYP131	11935.0
SYP71	11822.0
VTI12	11653.0
AT4G08520	11527.0
ATEXO70A1	11521.0
TOL3	11452.0
SAR1	11019.0
SH3P1	10996.0
AT2G21390	10757.0
AT1G31730	10561.0
SYP32	10491.0
NPSN11	10139.0
ALPHAC-AD	10107.0
AT4G12770	10003.0
RER1B	9756.0
AT1G56610	9754.0
AT4G31490	9541.0
SYP125	9340.5
CPI1	9323.0
ATEXO70D2	8986.0
ATVAMP713	8657.0
AT4G02660	8639.0
GAMMA-ADR	8552.0
PVA22	8458.0
DELTA-ADR	8450.0
ATEXO70A3	8378.0
AT1G79990	8169.0
GC5	8037.0
PVA43	8035.0
MEMB12	7822.0
SYP22	7670.0
PRA1B4	7597.0
AT3G49420	7587.0
ORP1D	7537.0
AT4G34450	7386.0
AT1G52360	7383.0
AT1G67930	7311.0
ICR1	7262.0
SEC15B	7106.0
ORP2B	7006.0
VAMP712	7001.0
TOL7	6573.0
PAT2	6569.0
SYP123	6453.0
ATVAMP724	6178.0
AT5G05010	6063.0
ATEXO70C2	5933.0
PRA1F1	5396.0
PRA1G1	5362.0
AT1G60070	5327.0
AT5G52270	4806.0
PHYL1.1	4759.0
VAMP726	4472.0
AT1G47920	4465.0
PVA21	4388.0
AT4G11380	4279.0
AT5G39630	4254.0
VAMP725	4050.0
GOS11	3903.0
AT3G50860	3553.0
ORP3B	3428.0
AT2G34840	3143.5
AT1G79070	2996.0
VPS20.2	2975.0
AGD10	2951.0
KN	2896.0
AT4G31480	2787.0
ORP4A	2657.0
CHC2	2468.0
EYE	2403.0
SYP124	2316.0
CHC1	2237.0
ORP2A	2175.0
AT1G62020	1969.0
VPS52	1947.0
TOL1	1693.0
SYP81	1608.0
AT1G30630	1506.0
VPS24-2	1221.0
ATEXO70E1	1191.0
ATEXO70H3	1120.0
AT3G03180	1028.0
VTI11	1005.0
SYP121	940.0
AAP19-1	628.0
GOS12	170.0
SYP72	84.0
MEMB11	70.0
VAMP711	-69.0
GC6	-208.0
AP17	-248.0
ATEXO70D3	-261.0
HIT1	-384.0
SEC8	-824.0
SYP24	-1053.0
SNAP33	-1099.0
VTI13	-1249.0
AT3G05000	-1255.0
AT3G15980	-1321.0
KEU	-1355.0
ATEXO70G2	-1501.0
PVA41	-1542.0
ATEXO70F1	-1608.0
AUXI1	-1661.0
VAMP721	-1976.0
AT3G54160	-2161.0
SYP51	-2245.0
SYP42	-2488.0
AT4G32640	-2556.0
VAMP728	-2565.0
PRA1F2	-2603.0
SYP31	-2650.0
SYP41	-2733.0
ALPHA-ADR	-2835.0
ORP4B	-3007.0
AT3G59270	-3191.0
ATEXO70H4	-3256.0
PRA1B2	-3381.0
AT5G11490	-3427.0
VAMP727	-3444.0
ATEXO70H8	-3572.0
YKT61	-4009.0
PRA1B1	-4239.0
AT3G22845	-4281.0
AT1G64180	-4475.0
SYP23	-4662.0
SEH1	-4703.0
AT5G38840	-4952.0
SH3P2	-5109.0
AT1G71300	-5421.0
AT4G32760	-5677.0
SYP21	-5796.0
SYP122	-6227.0
SYP61	-6381.0
AT4G21450	-7178.0
SYP73	-7427.0
SNX2A	-7684.0
TOL4	-7853.0
ATEXO70A2	-8877.0
GC2	-10702.0
AT5G01430	-10986.0
PUX8	-11065.0
TOL2	-11131.0
BETAC-AD	-11633.0
VAMP723	-11637.0
ORP3C	-11819.0
SYP112	-12090.0
TOL5	-12197.0
YKT62	-12552.0
ORP4C	-13050.0
ORP3A	-13087.0
AT1G48390	-13100.0

CELL_WALL_CELL_WALL_PROTEINS_AGPS_AGP

CELL_WALL_CELL_WALL_PROTEINS_AGPS_AGP
	13
set	CELL_WALL_CELL_WALL_PROTEINS_AGPS_AGP
setSize	42
pANOVA	1.48e-05
s.dist	0.386
p.adjustANOVA	0.000628

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AGP17	13345
AGP21	13304
AGP14	13177
FLA17	13090
AGP26	13007
AGP25	12773
FLA18	12470
FLA6	12044
FLA13	11827
AGP18	11586
FLA7	11268
FLA2	11198
FLA15	11163
AGP7	10748
FLA12	10595
AGP22	10336
AGP12	10134
FLA1	8959
AGP13	7784
AGP10	7477

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AGP17	13345
AGP21	13304
AGP14	13177
FLA17	13090
AGP26	13007
AGP25	12773
FLA18	12470
FLA6	12044
FLA13	11827
AGP18	11586
FLA7	11268
FLA2	11198
FLA15	11163
AGP7	10748
FLA12	10595
AGP22	10336
AGP12	10134
FLA1	8959
AGP13	7784
AGP10	7477
FLA9	7358
AGP9	6395
FLA11	5812
AGP1	5218
FLA4	5161
AT4G16980	5097
AGP4	4204
AGP3	4002
AGP24	3014
AGP27	2108
FLA8	1301
AGP19	292
AGP2	-1267
AGP16	-2101
FLA10	-2333
AGP20	-2698
AGP23	-4216
AGP40	-7227
AGP5	-8051
AGP11	-8143
APG	-10699
FLA5	-13080

PROTEIN_SYNTHESIS_RIBOSOMAL_RNA

PROTEIN_SYNTHESIS_RIBOSOMAL_RNA
	141
set	PROTEIN_SYNTHESIS_RIBOSOMAL_RNA
setSize	15
pANOVA	2.7e-05
s.dist	-0.626
p.adjustANOVA	0.000973

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT3G41768	-13163.0
RRN18	-13133.0
RRN16S.1	-13092.5
RRN16S.2	-13092.5
AT2G01020	-12861.5
AT3G41979	-12861.5
RRN23S.1	-12615.5
RRN23S.2	-12615.5
RRN26	-12019.0
RRN4.5S.1	-5910.5
RRN4.5S.2	-5910.5
AT2G01010	-5825.0
RRN5S	-4108.0
RRN5	4321.0
AT2G37990	6637.0

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT3G41768	-13163.0
RRN18	-13133.0
RRN16S.1	-13092.5
RRN16S.2	-13092.5
AT2G01020	-12861.5
AT3G41979	-12861.5
RRN23S.1	-12615.5
RRN23S.2	-12615.5
RRN26	-12019.0
RRN4.5S.1	-5910.5
RRN4.5S.2	-5910.5
AT2G01010	-5825.0
RRN5S	-4108.0
RRN5	4321.0
AT2G37990	6637.0

PROTEIN_TARGETING_SECRETORY_PATHWAY_UNSPECIFIED

PROTEIN_TARGETING_SECRETORY_PATHWAY_UNSPECIFIED
	163
set	PROTEIN_TARGETING_SECRETORY_PATHWAY_UNSPECIFIED
setSize	80
pANOVA	2.95e-05
s.dist	0.27
p.adjustANOVA	0.000973

Top enriched genes

Top 20 genes
GeneID	Gene Rank
SFH3	13360
AP1M1	12824
SCY2	12696
PATL4	12605
AT5G52280	12505
AT2G19790	12501
AT4G08690	12384
SEC61G3	11847
AAP19-2	11750
PATL5	11589
AT1G01630	11449
AP1M2	11394
SFH6	11346
SFH13	11223
PATL3	11213
ARL8D	10873
AT5G61970	10792
AP4M	10775
AT3G09800	10610
AT1G53530	10546

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
SFH3	13360
AP1M1	12824
SCY2	12696
PATL4	12605
AT5G52280	12505
AT2G19790	12501
AT4G08690	12384
SEC61G3	11847
AAP19-2	11750
PATL5	11589
AT1G01630	11449
AP1M2	11394
SFH6	11346
SFH13	11223
PATL3	11213
ARL8D	10873
AT5G61970	10792
AP4M	10775
AT3G09800	10610
AT1G53530	10546
AT3G15710	10322
ARF2-A	10305
VPS28-2	9606
AP3M	9427
AT3G24840	9406
AT4G36640	9220
SRP9	9079
AT5G47510	8672
AT5G27430	7811
SFH12	7629
AT2G34250	7540
PATL6	7450
ARL8C	7370
AT1G55840	7109
AT5G47730	6258
ARFA1E	6044
SRP-54B	6038
SEC22	5805
ARL8B	5391
SFH2	4655
NPSN12	4603
SNAP30	4254
AT1G75370	4137
AT1G22180	3761
ARL8A	3655
SFH7	3371
AT2G18770	3250
GSNAP	2613
AT5G05670	2384
SEC61G2	2271
SRP-54C	2142
AT4G24920	2128
AT1G52600	1665
SFH10	949
SFH4	753
ASNAP1	730
SRP19	-223
ATARFA1B	-705
ASNAP2	-788
AT5G46630	-868
AT1G14820	-2416
AT1G60970	-2574
ATARFB1C	-2827
SRP14	-3671
AT5G27220	-3992
AT3G46450	-4476
AT1G75170	-4833
AT1G29960	-5476
ATARFC1	-6218
AT5G66970	-7145
AT3G10780	-7541
ATARFB1B	-7793
SEC1B	-8158
AT5G60460	-8687
AT4G30600	-9475
AT1G78720	-10539
AT3G07680	-10886
AT3G60540	-11285
AT1G67680	-11545
ATEXO70H2	-12608

NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS

NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS
	97
set	NOT_ASSIGNED_NO_ONTOLOGY_GLYCINE_RICH_PROTEINS
setSize	76
pANOVA	6.44e-05
s.dist	-0.265
p.adjustANOVA	0.00191

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT5G07570	-13412
GRP20	-13280
AT2G05510	-13233
DOT1	-13220
AT4G18280	-13203
ATGRP9	-13175
AT4G32920	-13099
AT5G17650	-13070
AT1G66820	-13007
AT1G04800	-12973
AT5G49350	-12945
GRP5	-12843
AT5G61660	-12797
AT5G46730	-12760
AT4G38710	-12730
AT1G67870	-12587
AT4G30450	-12039
GRP23	-12026
AT4G10330	-11957
HIPP33	-11798

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT5G07570	-13412.0
GRP20	-13280.0
AT2G05510	-13233.0
DOT1	-13220.0
AT4G18280	-13203.0
ATGRP9	-13175.0
AT4G32920	-13099.0
AT5G17650	-13070.0
AT1G66820	-13007.0
AT1G04800	-12973.0
AT5G49350	-12945.0
GRP5	-12843.0
AT5G61660	-12797.0
AT5G46730	-12760.0
AT4G38710	-12730.0
AT1G67870	-12587.0
AT4G30450	-12039.0
GRP23	-12026.0
AT4G10330	-11957.0
HIPP33	-11798.0
AT4G30460	-11464.0
AT2G15340	-11268.0
AT4G15150	-10742.0
AT4G29020	-10669.0
GRP14	-10219.0
AT4G17620	-9920.0
AT1G76965	-9597.0
AT5G11700	-9215.0
AT4G08230	-8684.0
GRDP2	-8419.0
AT3G59640	-8162.0
AT5G42635	-7194.0
AT4G21620	-6641.0
AT1G36675	-6518.0
AT5G28630	-6384.0
OPSL1	-5613.0
GRP17	-5421.0
TGD5	-5292.0
OPS	-5058.0
AT2G30560	-4730.0
AT4G15460	-4694.0
AT2G05530	-4277.0
AT2G26120	-4273.0
P23-1	-3946.0
AT1G27710	-3653.0
GRP3	-3483.0
AT5G07571	-1778.0
AT1G02710	-1351.0
AT1G04660	-1318.0
AT1G27090	440.0
AT2G15780	1387.0
AT5G47020	1499.0
AT5G55680	1701.0
AT3G29075	2287.0
GIF1	2679.0
GRDP1	2947.0
AT3G04640	3052.0
AT1G07135	3724.0
GRP19	4254.0
AT3G06780	5062.0
AT1G15280	6012.0
AT4G22740	6212.0
AT4G36230	6377.0
AT2G05540	6530.0
AT4G33610	7088.0
AT4G34300	7415.5
AT2G05580	8621.0
AT2G04063	9169.0
GRP3S	9333.0
AT4G37682	9652.0
AT4G33930	9684.0
GRP18	10930.0
AT3G24250	11599.0
AT1G75550	11694.0
AT5G33390	12619.0
AT2G15770	12979.0

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III
	254
set	SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_III
setSize	44
pANOVA	8.07e-05
s.dist	0.343
p.adjustANOVA	0.00218

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT3G50230	13385
PRK6	13158
AT5G41680	11949
PXC1	11590
AT5G05160	11029
AT5G07620	10606
AT1G67510	10605
AT5G61570	10143
AT4G20940	10039
AT1G10850	9711
AT2G23300	9588
ZAR1	9236
AT2G42290	8936
AT5G24100	8804
RKL1	8508
AT5G58300	7556
AT5G10020	7547
AT2G26730	6993
AT3G02880	6947
PRK5	6905

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT3G50230	13385
PRK6	13158
AT5G41680	11949
PXC1	11590
AT5G05160	11029
AT5G07620	10606
AT1G67510	10605
AT5G61570	10143
AT4G20940	10039
AT1G10850	9711
AT2G23300	9588
ZAR1	9236
AT2G42290	8936
AT5G24100	8804
RKL1	8508
AT5G58300	7556
AT5G10020	7547
AT2G26730	6993
AT3G02880	6947
PRK5	6905
AT3G08680	6758
AT1G25320	6554
AT2G27060	5445
MRLK	4350
AT4G34220	4154
PRK4	3965
AT1G64210	2964
AT1G60630	2858
AT5G53320	2552
TMKL1	2545
AT4G37250	1965
AT4G31250	1734
RLK	1528
AT5G67200	1052
RLK902	773
AT5G43020	352
PRK1	-474
AT1G68400	-2261
AT2G15300	-2486
AT4G23740	-4596
AT1G72460	-5000
AT1G66830	-6206
LRR1	-9460
AT3G57830	-10785

MISC_MYROSINASES-LECTIN-JACALIN

MISC_MYROSINASES-LECTIN-JACALIN
	76
set	MISC_MYROSINASES-LECTIN-JACALIN
setSize	56
pANOVA	0.000165
s.dist	-0.291
p.adjustANOVA	0.00409

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NSP1	-13270
PP2A1	-13261
JAL40	-13189
PBP1	-13144
F-ATMBP	-12935
JAL22	-12747
NSP4	-12648
JAL18	-12621
AT1G78850	-12250
AT1G78820	-12201
JAL12	-12200
JAL23	-12179
JAL3	-11912
JAL13	-11717
LLP	-11678
JAL38	-11506
AT1G54020	-11128
MBP1	-10658
TGG5	-9660
AT3G16530	-9627

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NSP1	-13270.0
PP2A1	-13261.0
JAL40	-13189.0
PBP1	-13144.0
F-ATMBP	-12935.0
JAL22	-12747.0
NSP4	-12648.0
JAL18	-12621.0
AT1G78850	-12250.0
AT1G78820	-12201.0
JAL12	-12200.0
JAL23	-12179.0
JAL3	-11912.0
JAL13	-11717.0
LLP	-11678.0
JAL38	-11506.0
AT1G54020	-11128.0
MBP1	-10658.0
TGG5	-9660.0
AT3G16530	-9627.0
RLK4	-9462.0
JAL5	-8224.0
JAL44	-7934.0
MVP1	-7663.0
JAL24	-6398.5
AT5G18470	-5816.0
JAL19	-5783.0
JAL41	-5642.0
LEC	-5307.0
TGG1	-5041.0
AT3G14220	-4587.0
AtPP2-A13	-4489.0
AT5G38540	-3661.0
AT1G61230	-2645.0
AT1G52110	-1576.0
AT1G78830	-1331.0
ATPP2-A2	-608.0
GLL23	-578.0
AT1G78860	-468.0
GLL22	430.0
JAL46	722.0
JAL48	925.0
JAL36	3277.0
JAL15	3640.0
NSP2	4044.0
SD31	5151.0
JAL4	5206.0
AT1G60110	5240.0
AT1G07460	7209.0
JAL2	7995.0
JAL42	8935.0
JAL47	9250.5
AT1G60095	10427.0
AT3G09035	11014.0
PP2A4	12426.0
AT5G01090	12463.0

PS_LIGHTREACTION_NADH_DH

PS_LIGHTREACTION_NADH_DH
	166
set	PS_LIGHTREACTION_NADH_DH
setSize	12
pANOVA	0.000198
s.dist	-0.62
p.adjustANOVA	0.00452

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NDHF	-12854
CRR3	-12464
NDHJ	-11938
NDHK	-11485
ndhL	-11394
ndhO	-11223
NDHD	-10762
NDHC	-9187
NDHG	-6702
NDHM	-3784
ndhN	680
AT4G37920	981

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NDHF	-12854
CRR3	-12464
NDHJ	-11938
NDHK	-11485
ndhL	-11394
ndhO	-11223
NDHD	-10762
NDHC	-9187
NDHG	-6702
NDHM	-3784
ndhN	680
AT4G37920	981

CELL_WALL_CELLULOSE_SYNTHESIS

CELL_WALL_CELLULOSE_SYNTHESIS
	11
set	CELL_WALL_CELLULOSE_SYNTHESIS
setSize	14
pANOVA	0.00028
s.dist	0.561
p.adjustANOVA	0.00593

Top enriched genes

Top 20 genes
GeneID	Gene Rank
KOR	13243
PNT1	13176
CSLC12	12651
CSLC4	12216
CSLA2	12135
CSLC5	11958
CSLA9	11544
ATCSLA01	11155
CSLC8	8257
ATCSLA11	5884
CSLC6	3747
CSLA14	-796
CSLA15	-4079
CSLA10	-6079

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
KOR	13243
PNT1	13176
CSLC12	12651
CSLC4	12216
CSLA2	12135
CSLC5	11958
CSLA9	11544
ATCSLA01	11155
CSLC8	8257
ATCSLA11	5884
CSLC6	3747
CSLA14	-796
CSLA15	-4079
CSLA10	-6079

CELL_WALL_CELL_WALL_PROTEINS_HRGP

CELL_WALL_CELL_WALL_PROTEINS_HRGP
	14
set	CELL_WALL_CELL_WALL_PROTEINS_HRGP
setSize	16
pANOVA	0.000617
s.dist	-0.494
p.adjustANOVA	0.0122

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT4G11430	-13386
AT5G12880	-13240
AT1G26240	-13237
ATEXT4	-11465
EXT3	-10802
FRL4B	-10323
AT2G28240	-10196
FRL4A	-9675
AT4G28300	-7237
AT4G08410	-5603
AT2G43150	-5068
AT5G51680	-3182
AT4G28160	-735
EXT2	1632
AT4G16790	2288
AT4G08400	3784

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT4G11430	-13386
AT5G12880	-13240
AT1G26240	-13237
ATEXT4	-11465
EXT3	-10802
FRL4B	-10323
AT2G28240	-10196
FRL4A	-9675
AT4G28300	-7237
AT4G08410	-5603
AT2G43150	-5068
AT5G51680	-3182
AT4G28160	-735
EXT2	1632
AT4G16790	2288
AT4G08400	3784

PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II

PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II
	167
set	PS_LIGHTREACTION_PHOTOSYSTEM_II_LHC-II
setSize	14
pANOVA	0.000735
s.dist	-0.521
p.adjustANOVA	0.0136

Top enriched genes

Top 20 genes
GeneID	Gene Rank
LHCB1.1	-12057
LHCB4.3	-11399
LHCB6	-11202
LHCB1.3	-11197
LHCB4.1	-9305
LHCB3	-8531
LHCB5	-7772
LHCB4.2	-6076
LHB1B1	-5875
LHCB2.2	-5073
LHCB2.4	-4795
LHB1B2	-4602
LHCB2.1	-3476
LHCB7	3196

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
LHCB1.1	-12057
LHCB4.3	-11399
LHCB6	-11202
LHCB1.3	-11197
LHCB4.1	-9305
LHCB3	-8531
LHCB5	-7772
LHCB4.2	-6076
LHB1B1	-5875
LHCB2.2	-5073
LHCB2.4	-4795
LHB1B2	-4602
LHCB2.1	-3476
LHCB7	3196

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE
	87
set	MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_F1-ATPASE
setSize	21
pANOVA	0.00115
s.dist	-0.41
p.adjustANOVA	0.0192

Top enriched genes

Top 20 genes
GeneID	Gene Rank
YMF19	-13329
ATP1	-12493
ATP5	-12163
ATPQ	-11011
AT5G08680	-10974
AT5G08670	-10408
AT5G08690	-10369
ATP6-2	-10223
AT2G07698	-10075
AT5G47030	-9570
ATPC	-6379
AT1G51650	-6149
AT4G26210	-5563
ORF25	-2790
AT4G29480	-1523
AT5G60730	-1300
AT5G12420	-817
AT3G46430	-442
AT2G19680	5444
ATP9	6326

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
YMF19	-13329
ATP1	-12493
ATP5	-12163
ATPQ	-11011
AT5G08680	-10974
AT5G08670	-10408
AT5G08690	-10369
ATP6-2	-10223
AT2G07698	-10075
AT5G47030	-9570
ATPC	-6379
AT1G51650	-6149
AT4G26210	-5563
ORF25	-2790
AT4G29480	-1523
AT5G60730	-1300
AT5G12420	-817
AT3G46430	-442
AT2G19680	5444
ATP9	6326
ATP6-1	7941

RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY
	184
set	RNA_REGULATION_OF_TRANSCRIPTION_ARF,_AUXIN_RESPONSE_FACTOR_FAMILY
setSize	17
pANOVA	0.00116
s.dist	0.455
p.adjustANOVA	0.0192

Top enriched genes

Top 20 genes
GeneID	Gene Rank
ARF14	13198
ARF9	12502
ARF18	12240
ARF4	11823
ARF1	11535
ARF16	9946
ARF17	9685
ARF3	9122
ARF8	8838
ARF19	8305
ARF11	5607
ARF20	4828
ARF12	3112
ARF6	2785
ARF10	397
ARF5	-7520
ARF2	-13045

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
ARF14	13198
ARF9	12502
ARF18	12240
ARF4	11823
ARF1	11535
ARF16	9946
ARF17	9685
ARF3	9122
ARF8	8838
ARF19	8305
ARF11	5607
ARF20	4828
ARF12	3112
ARF6	2785
ARF10	397
ARF5	-7520
ARF2	-13045

TRANSPORT_SULPHATE

TRANSPORT_SULPHATE
	295
set	TRANSPORT_SULPHATE
setSize	12
pANOVA	0.00183
s.dist	-0.52
p.adjustANOVA	0.0273

Top enriched genes

Top 20 genes
GeneID	Gene Rank
SULTR3;5	-13399
SULTR1;2	-13343
SULTR2;1	-12937
SULTR3;1	-12661
SULTR1;3	-11446
SULTR2;2	-9916
SULTR3;4	-7078
SULTR4;2	-4076
SULTR3;2	-3716
SULTR4;1	-3577
SULTR3;3	-328
SULTR1;1	8566

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
SULTR3;5	-13399
SULTR1;2	-13343
SULTR2;1	-12937
SULTR3;1	-12661
SULTR1;3	-11446
SULTR2;2	-9916
SULTR3;4	-7078
SULTR4;2	-4076
SULTR3;2	-3716
SULTR4;1	-3577
SULTR3;3	-328
SULTR1;1	8566

CELL_WALL_CELLULOSE_SYNTHESIS_CELLULOSE_SYNTHASE

CELL_WALL_CELLULOSE_SYNTHESIS_CELLULOSE_SYNTHASE
	12
set	CELL_WALL_CELLULOSE_SYNTHESIS_CELLULOSE_SYNTHASE
setSize	28
pANOVA	0.00184
s.dist	0.34
p.adjustANOVA	0.0273

Top enriched genes

Top 20 genes
GeneID	Gene Rank
CESA6	13160
CESA3	13052
CESA1	13003
CSLG2	12819
CESA2	12441
CSLB2	12012
CSLB5	11741
CESA4	11000
CESA5	10958
CSLD5	10758
CESA8	10589
CESA7	9547
CSLA7	8892
CSLA3	8817
CSLB3	5363
CSLB1	4335
CESA9	3198
CSLE1	2201
CESA10	-2139
CSLD2	-2258

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
CESA6	13160
CESA3	13052
CESA1	13003
CSLG2	12819
CESA2	12441
CSLB2	12012
CSLB5	11741
CESA4	11000
CESA5	10958
CSLD5	10758
CESA8	10589
CESA7	9547
CSLA7	8892
CSLA3	8817
CSLB3	5363
CSLB1	4335
CESA9	3198
CSLE1	2201
CESA10	-2139
CSLD2	-2258
CSLD3	-2543
CSLB4	-3642
CSLG1	-3808
CSLG3	-4983
CSLD4	-5835
CSLD6	-5981
CSLD1	-6801
ATCSLB06	-8850

SECONDARY_METABOLISM_SIMPLE_PHENOLS

SECONDARY_METABOLISM_SIMPLE_PHENOLS
	236
set	SECONDARY_METABOLISM_SIMPLE_PHENOLS
setSize	18
pANOVA	0.00234
s.dist	0.414
p.adjustANOVA	0.0331

Top enriched genes

Top 20 genes
GeneID	Gene Rank
LAC14	12576
LAC13	11926
LAC16	11550
LAC1	10522
LAC3	10337
TT10	9791
LAC6	9664
IGMT5	8939
LAC17	8534
IRX12	8020
LAC7	5017
LAC8	2606
LAC10	2009
AT1G33030	-584
LAC2	-1739
LAC11	-2945
LAC5	-2985
LAC12	-3615

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
LAC14	12576
LAC13	11926
LAC16	11550
LAC1	10522
LAC3	10337
TT10	9791
LAC6	9664
IGMT5	8939
LAC17	8534
IRX12	8020
LAC7	5017
LAC8	2606
LAC10	2009
AT1G33030	-584
LAC2	-1739
LAC11	-2945
LAC5	-2985
LAC12	-3615

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE
	86
set	MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C_REDUCTASE
setSize	11
pANOVA	0.00273
s.dist	-0.522
p.adjustANOVA	0.0357

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT3G10860	-13162
QCR7-1	-12521
AT3G52730	-12476
UCR1-1	-12275
AT5G05370	-8040
UCR1-2	-7331
QCR7-2	-6543
AT2G01090	-4248
AT2G07727	-2117
AT1G15120	-1688
AT1G36380	3171

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT3G10860	-13162
QCR7-1	-12521
AT3G52730	-12476
UCR1-1	-12275
AT5G05370	-8040
UCR1-2	-7331
QCR7-2	-6543
AT2G01090	-4248
AT2G07727	-2117
AT1G15120	-1688
AT1G36380	3171

PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION

PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION
	165
set	PS_LIGHTREACTION_CYCLIC_ELECTRON_FLOW-CHLORORESPIRATION
setSize	12
pANOVA	0.00284
s.dist	-0.497
p.adjustANOVA	0.0357

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NDHA	-12787.0
NDHH	-12394.0
NDHI	-12221.0
NDHE	-9919.0
PGRL1B	-8765.0
NDHB.1	-8402.5
NDHB.2	-8402.5
AOX4	-5668.0
PGR5	-3550.0
PGRL1A	-3103.0
NDF2	441.0
PIFI	4431.0

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NDHA	-12787.0
NDHH	-12394.0
NDHI	-12221.0
NDHE	-9919.0
PGRL1B	-8765.0
NDHB.1	-8402.5
NDHB.2	-8402.5
AOX4	-5668.0
PGR5	-3550.0
PGRL1A	-3103.0
NDF2	441.0
PIFI	4431.0

NOT_ASSIGNED_NO_ONTOLOGY_DC1_DOMAIN_CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_DC1_DOMAIN_CONTAINING_PROTEIN
	94
set	NOT_ASSIGNED_NO_ONTOLOGY_DC1_DOMAIN_CONTAINING_PROTEIN
setSize	112
pANOVA	0.00288
s.dist	0.163
p.adjustANOVA	0.0357

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT5G59940	13231
AT1G61840	13054
AT5G40590	12770
AT5G54030	12765
AT3G07000	12627
AT2G19660	12385
AT5G45730	12019
AT3G27510	11797
AT4G13130	11531
AT3G06990	11482
AT4G02540	11335
AT5G44770	11174
AT3G59130	11085
AT5G02360	11031
AT4G11550	11028
AT4G15070	10932
AT5G03360	10891
AT2G02610	10857
AT1G65180	10851
AT1G44020	10670

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT5G59940	13231
AT1G61840	13054
AT5G40590	12770
AT5G54030	12765
AT3G07000	12627
AT2G19660	12385
AT5G45730	12019
AT3G27510	11797
AT4G13130	11531
AT3G06990	11482
AT4G02540	11335
AT5G44770	11174
AT3G59130	11085
AT5G02360	11031
AT4G11550	11028
AT4G15070	10932
AT5G03360	10891
AT2G02610	10857
AT1G65180	10851
AT1G44020	10670
AT5G02340	10635
AT4G14980	10526
AT3G11402	10294
AT3G59120	10124
AT2G21830	10083
AT3G26240	9973
AT2G13950	9502
AT3G27480	9303
AT3G46810	8968
AT4G01350	8823
AT2G27660	8813
AT5G37210	8604
AT1G69150	8308
AT5G26190	7855
AT4G26380	7787
AT3G26250	7458
AT3G27473	7438
AT1G34480	7365
AT1G35610	7267
AT3G11390	6902
AT5G55800	6785
AT3G43890	6747
AT2G02700	6673
AT5G29624	6536
AT2G44400	6334
AT4G10370	6248
AT4G02190	6211
AT3G45530	6109
AT2G43220	5906
AT1G55380	5600
AT2G04500	5520
AT5G59930	5443
AT3G25850	5381
AT4G01925	4758
AT1G66440	4286
AT2G23100	3284
AT2G16050	2789
AT4G11540	1972
AT4G13992	1449
AT2G02640	1447
AT4G11390	1434
AT1G55430	1084
AT2G37820	904
AT2G17740	554
AT5G40320	452
AT2G04680	390
AT4G02180	231
AT5G48320	194
AT1G66450	96
AT3G28650	-13
AT3G13760	-389
AT5G42840	-576
AT2G13900	-738
AT2G37780	-993
AT5G55780	-1050
AT2G02630	-1195
AT5G02330	-1888
AT2G44380	-2228
AT2G40050	-2284
AT5G02350	-2534
AT3G11385	-3616
AT4G16015	-3793
AT3G26550	-3798
AT3G27490	-4160
AT1G61710	-4176
AT1G55390	-4634
AT1G29180	-4674
AT2G19650	-4710
AT5G17960	-5155
AT1G55440	-5203
AT2G17590	-5374
AT1G55700	-5549
AT5G42280	-6757
AT2G44370	-7004
AT4G01910	-7489
AT1G62030	-7803
AT3G13590	-7855
AT5G55770	-8138
AT1G44050	-9055
AT5G54040	-10170
AT5G01480	-10282
AT5G22355	-10726
AT3G27500	-10764
AT3G45840	-11111
AT1G60420	-11146
AT3G46800	-11293
AT2G02680	-11658
AT1G20990	-12011
AT3G50010	-12532
AT5G54050	-12629
AT2G28270	-12736
AT5G43520	-13018

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
	88
set	MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_NADH-DH_LOCALISATION_NOT_CLEAR
setSize	34
pANOVA	0.00323
s.dist	-0.292
p.adjustANOVA	0.0383

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT1G16700	-12660
AT2G47690	-11786
FRO1	-11200
AT5G11770	-11022
AT3G18410	-10437
AT3G03070	-9792
NAD7	-9775
NAD6	-8974
AT3G03100	-8006
AT2G02050	-7812
EMB1467	-6858
AT3G06310	-6849
AT4G02580	-6737
AT1G49140	-6690
AT2G20360	-5618
CI51	-5238
NAD4	-5049
AT2G07689	-4581
NAD2A	-4146
NAD1B	-4070

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT1G16700	-12660
AT2G47690	-11786
FRO1	-11200
AT5G11770	-11022
AT3G18410	-10437
AT3G03070	-9792
NAD7	-9775
NAD6	-8974
AT3G03100	-8006
AT2G02050	-7812
EMB1467	-6858
AT3G06310	-6849
AT4G02580	-6737
AT1G49140	-6690
AT2G20360	-5618
CI51	-5238
NAD4	-5049
AT2G07689	-4581
NAD2A	-4146
NAD1B	-4070
AT4G26965	-3553
AT5G52840	-2662
NAD2B	-2658
AT1G79010	-2168
NAD9	-2054
AT5G47890	-1072
AT2G07751	-209
AT2G07785	698
AT5G18800	1601
NAD5A	2571
NAD5C	6362
AT3G62790	6510
DER2.1	7920
NAD1C	12316

TRANSPORT_METABOLITE_TRANSPORTERS_AT_THE_ENVELOPE_MEMBRANE

TRANSPORT_METABOLITE_TRANSPORTERS_AT_THE_ENVELOPE_MEMBRANE
	284
set	TRANSPORT_METABOLITE_TRANSPORTERS_AT_THE_ENVELOPE_MEMBRANE
setSize	26
pANOVA	0.00335
s.dist	0.332
p.adjustANOVA	0.0383

Top enriched genes

Top 20 genes
GeneID	Gene Rank
UUAT1	12945
AT3G14410	12629
BT1	12495
AT1G48230	11984
AT1G53660	11792
GPT2	10501
AT1G06470	10252
UDP-GALT1	9794
AT3G11320	9221
AT1G12500	9080
AT1G43310	8946
PPT1	8302
AT3G17430	6271
AT4G32390	4987
APE2	4676
PPT2	3970
AT2G25520	2888
XPT	703
MEX1	379
AT5G11230	-2144

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
UUAT1	12945
AT3G14410	12629
BT1	12495
AT1G48230	11984
AT1G53660	11792
GPT2	10501
AT1G06470	10252
UDP-GALT1	9794
AT3G11320	9221
AT1G12500	9080
AT1G43310	8946
PPT1	8302
AT3G17430	6271
AT4G32390	4987
APE2	4676
PPT2	3970
AT2G25520	2888
XPT	703
MEX1	379
AT5G11230	-2144
AT5G05820	-2550
AT4G03950	-3049
AAC1	-4021
AT3G10290	-6066
DIT1	-6583
GPT1	-12104

NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN
	99
set	NOT_ASSIGNED_NO_ONTOLOGY_LATE_EMBRYOGENESIS_ABUNDANT_DOMAIN-CONTAINING_PROTEIN
setSize	10
pANOVA	0.00402
s.dist	-0.525
p.adjustANOVA	0.0436

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT3G17520	-13271
AT2G18340	-13105
AT4G36600	-11279
AT2G03850	-11272
AT4G21020	-9037
AT2G03740	-8833
AT5G44310	-8311
AT2G42560	-6474
AT1G72100	4028
AT4G13230	6861

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT3G17520	-13271
AT2G18340	-13105
AT4G36600	-11279
AT2G03850	-11272
AT4G21020	-9037
AT2G03740	-8833
AT5G44310	-8311
AT2G42560	-6474
AT1G72100	4028
AT4G13230	6861

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE
	132
set	PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE
setSize	22
pANOVA	0.00411
s.dist	0.353
p.adjustANOVA	0.0436

Top enriched genes

Top 20 genes
GeneID	Gene Rank
ATNEK4	13037
AT3G24715	12668
ATM	12087
AT1G49180	10510
AT4G11890	9070
PTST	8872
ATSK42	8553
MHK	7313
AT1G24485	7305
NET2D	7021
AT1G54610	6054
AT4G11845	4545
AT5G57565	3993
SRK2E	2101
AT2G42640	1566
CKB3	939
AtAUR2	844
CPK28	476
ATMKK2	-116
AT3G01090	-1773

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
ATNEK4	13037
AT3G24715	12668
ATM	12087
AT1G49180	10510
AT4G11890	9070
PTST	8872
ATSK42	8553
MHK	7313
AT1G24485	7305
NET2D	7021
AT1G54610	6054
AT4G11845	4545
AT5G57565	3993
SRK2E	2101
AT2G42640	1566
CKB3	939
AtAUR2	844
CPK28	476
ATMKK2	-116
AT3G01090	-1773
WNK1	-3072
CDKG1	-8214

MISC_GLUTATHIONE_S_TRANSFERASES

MISC_GLUTATHIONE_S_TRANSFERASES
	73
set	MISC_GLUTATHIONE_S_TRANSFERASES
setSize	55
pANOVA	0.00583
s.dist	-0.215
p.adjustANOVA	0.0597

Top enriched genes

Top 20 genes
GeneID	Gene Rank
GSTU10	-13181
GSTU11	-12292
GSTF9	-11887
ATGSTU21	-11821
GSTF2	-11494
AT5G44000	-11172
GSTU3	-10566
GSTU8	-10538
PER4	-10325
GSTT1	-10142
GSTF10	-10093
GSTL3	-10066
GSTU13	-9843
GSTF3	-9717
GSTU20	-9321
GSTU2	-8709
GSTU19	-7988
GSTU24	-7979
GSTU1	-7952
GSTU4	-7351

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
GSTU10	-13181
GSTU11	-12292
GSTF9	-11887
ATGSTU21	-11821
GSTF2	-11494
AT5G44000	-11172
GSTU3	-10566
GSTU8	-10538
PER4	-10325
GSTT1	-10142
GSTF10	-10093
GSTL3	-10066
GSTU13	-9843
GSTF3	-9717
GSTU20	-9321
GSTU2	-8709
GSTU19	-7988
GSTU24	-7979
GSTU1	-7952
GSTU4	-7351
GSTU9	-6044
GSTZ2	-5992
GSTT2	-5969
GSTF7	-5515
ATGSTZ1	-4167
AT1G65820	-4057
GSTU5	-3364
GSTU27	-3249
GSTT3	-2855
GSTU17	-2791
GSTU12	-2688
GSTF14	-2490
GSTF6	-2030
AT4G19880	-1314
GSTU18	-802
GSTU6	-536
GSTU25	-38
GSTF8	191
GSTF12	221
GSTU16	1248
GSTF11	2207
GSTU22	2247
GSTF13	2313
GSTU7	3018
GSTU23	3295
ATGSTF5	3558
GSTU26	4840
TCHQD	6407
GSTU28	6763
GSTL1	8034
GSTU15	9382
GSTL2	9492
GSTU14	10730
ATGSTF4	10735
PER5	12171

SECONDARY_METABOLISM_FLAVONOIDS_FLAVONOLS

SECONDARY_METABOLISM_FLAVONOIDS_FLAVONOLS
	231
set	SECONDARY_METABOLISM_FLAVONOIDS_FLAVONOLS
setSize	11
pANOVA	0.00614
s.dist	0.477
p.adjustANOVA	0.0598

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT4G25310	13386
AT1G49390	12906
AT3G50210	10601
AT3G60290	9929
AT4G25300	8400
AT3G21420	7423
AT2G44800	5294
UGT73C6	3436
FLDH	1230
AT1G17010	-725
SRG1	-1708

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT4G25310	13386
AT1G49390	12906
AT3G50210	10601
AT3G60290	9929
AT4G25300	8400
AT3G21420	7423
AT2G44800	5294
UGT73C6	3436
FLDH	1230
AT1G17010	-725
SRG1	-1708

STRESS_BIOTIC_SIGNALLING

STRESS_BIOTIC_SIGNALLING
	276
set	STRESS_BIOTIC_SIGNALLING
setSize	13
pANOVA	0.00625
s.dist	-0.438
p.adjustANOVA	0.0598

Top enriched genes

Top 20 genes
GeneID	Gene Rank
PEP2	-13071
PEP4	-12757
RAR1	-11509
PEP3	-10457
EDS1	-9396
TIFY10A	-8304
MKS1	-8226
PEP5	-7815
PEP6	-4968
AIG2A	-1828
SRFR1	550
AIG1	1135
PEP7	9981

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
PEP2	-13071
PEP4	-12757
RAR1	-11509
PEP3	-10457
EDS1	-9396
TIFY10A	-8304
MKS1	-8226
PEP5	-7815
PEP6	-4968
AIG2A	-1828
SRFR1	550
AIG1	1135
PEP7	9981

TRANSPORT_MAJOR_INTRINSIC_PROTEINS_PIP

TRANSPORT_MAJOR_INTRINSIC_PROTEINS_PIP
	283
set	TRANSPORT_MAJOR_INTRINSIC_PROTEINS_PIP
setSize	13
pANOVA	0.00655
s.dist	0.435
p.adjustANOVA	0.0608

Top enriched genes

Top 20 genes
GeneID	Gene Rank
PIP1-5	12839
PIP1-3	12215
PIP2-8	10067
PIP2-5	9099
PIP1.4	9095
PIP2-4	8809
PIP2-7	7243
PIP2B	3620
PIP1B	3383
PIP2-1	2469
PIP2-6	296
PIP2-3	-1392
PIP1-1	-2081

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
PIP1-5	12839
PIP1-3	12215
PIP2-8	10067
PIP2-5	9099
PIP1.4	9095
PIP2-4	8809
PIP2-7	7243
PIP2B	3620
PIP1B	3383
PIP2-1	2469
PIP2-6	296
PIP2-3	-1392
PIP1-1	-2081

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI

SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
	255
set	SIGNALLING_RECEPTOR_KINASES_LEUCINE_RICH_REPEAT_VI
setSize	10
pANOVA	0.00759
s.dist	0.488
p.adjustANOVA	0.067

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT2G02780	11011
AT1G63430	11003
MDIS2	10351
AT3G03770	9493
AT5G41180	9134
AT1G14390	8928
AT5G63410	4942
AT5G45840	2612
AT5G07150	1646
AT5G14210	-3925

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT2G02780	11011
AT1G63430	11003
MDIS2	10351
AT3G03770	9493
AT5G41180	9134
AT1G14390	8928
AT5G63410	4942
AT5G45840	2612
AT5G07150	1646
AT5G14210	-3925

DEVELOPMENT_STORAGE_PROTEINS

DEVELOPMENT_STORAGE_PROTEINS
	24
set	DEVELOPMENT_STORAGE_PROTEINS
setSize	24
pANOVA	0.00769
s.dist	-0.314
p.adjustANOVA	0.067

Top enriched genes

Top 20 genes
GeneID	Gene Rank
VSP2	-13289
VSP1	-13249
PLP1	-13120
PLP5	-13012
AT5G19120	-12848
SDP1L	-12458
CRB	-12187
PLP3	-11487
AT1G33270	-11187
AT2S4	-9439
SDP1	-8591
AT1G07750	-7197
PLP6	-5321
PAP85	-4867
PLP2	-3755
PLP9	-3657
AT5G43590	-1044
PLP8	2079
CRA1	2755
PLP7	5014

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
VSP2	-13289
VSP1	-13249
PLP1	-13120
PLP5	-13012
AT5G19120	-12848
SDP1L	-12458
CRB	-12187
PLP3	-11487
AT1G33270	-11187
AT2S4	-9439
SDP1	-8591
AT1G07750	-7197
PLP6	-5321
PAP85	-4867
PLP2	-3755
PLP9	-3657
AT5G43590	-1044
PLP8	2079
CRA1	2755
PLP7	5014
AT2G28680	9443
AT2G28490	11159
AT5G44020	11241
CRC	13362

SIGNALLING_G-PROTEINS

SIGNALLING_G-PROTEINS
	240
set	SIGNALLING_G-PROTEINS
setSize	235
pANOVA	0.00789
s.dist	0.1
p.adjustANOVA	0.067

Top enriched genes

Top 20 genes
GeneID	Gene Rank
LIP2	13383
RIC3	13178
RABA2A	13105
AT2G38840	13022
AT4G01090	12830
ARA	12796
ARAC4	12669
AT4G28550	12649
RABG3F	12475
RABG3B	12348
NIG	12243
ARAC11	12130
AT1G06060	12030
AT5G06120	11964
ARAC3	11953
RABC2A	11832
RABB1C	11795
AT2G37290	11675
AT5G64730	11662
RABG2	11650

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
LIP2	13383.0
RIC3	13178.0
RABA2A	13105.0
AT2G38840	13022.0
AT4G01090	12830.0
ARA	12796.0
ARAC4	12669.0
AT4G28550	12649.0
RABG3F	12475.0
RABG3B	12348.0
NIG	12243.0
ARAC11	12130.0
AT1G06060	12030.0
AT5G06120	11964.0
ARAC3	11953.0
RABC2A	11832.0
RABB1C	11795.0
AT2G37290	11675.0
AT5G64730	11662.0
RABG2	11650.0
RABH1E	11380.0
RABA2C	11372.0
AT2G19240	11236.0
AT5G24390	11100.0
GG2	11027.0
AT4G08190	10938.0
PRA1B6	10883.0
RABH1D	10843.0
ROPGEF6	10842.0
RABE1D	10774.0
AGD2	10756.0
RIC5	10692.0
RABG3D	10642.0
ROPGAP1	10640.0
RABA4B	10633.0
GCR1	10559.0
AT5G50120	10187.0
NUCL2	10137.0
AGD4	10126.0
RABA1C	10098.0
ATROPGEF10	10086.0
RABA4C	10030.0
AT3G55020	9931.0
PRA1G2	9926.0
AT1G62450	9886.0
RABA5D	9422.0
RABA6A	9395.0
ATROPGEF2	9020.0
ROPGEF7	8912.0
ROPGAP4	8755.0
RABG3C	8729.0
ROPGEF9	8680.5
RABH1C	8670.0
ROPGEF1	8620.0
AT4G27100	8602.0
REP	8586.0
ROPGEF11	8397.0
PRA1E	8384.0
ROPGAP2	8377.0
RANBP1A	8329.0
ATMIN7	8185.0
DRG3	8043.0
RABA2D	8027.0
RABA1A	7887.0
RABA5A	7849.0
RABA4A	7798.0
AGD1	7720.0
AT4G32990	7442.0
RABG1	7290.5
AT3G59570	7203.0
ARAC1	7158.0
XLG1	7020.0
MIRO2	7007.0
AT4G12640	6843.0
AT3G02460	6787.0
ROPGEF4	6558.0
ATARFD1A	6523.0
RABB1A	6429.0
NUP50A	6423.0
TAF15	6385.0
AT1G10300	6293.0
ARAC7	6141.0
RABA5B	5958.0
RABA1D	5925.0
ROPGEF5	5837.0
SAR1B	5748.0
BIG2	5568.0
AT1G48570	5405.0
RABD1	5393.0
AT5G57960	5290.0
ATRABG3A	5275.0
RIC2	5245.0
RABD2C	4980.0
RIC1	4743.0
AT1G24290	4684.0
SIN2	4594.0
RABE1E	4509.0
RABA3	4408.0
ARAC10	4372.0
AT3G62560	4134.0
AGD15	4007.0
ARAC5	3891.0
AT2G43490	3860.0
AT3G49350	3777.0
GB1	3480.0
RABB1B	3039.0
RABA6B	3004.0
NSN1	2900.0
AGD3	2732.0
RANBP1B	2572.0
DGP3	2534.0
AT4G21520	2053.0
AT4G03156	1789.5
ATARLB1	1756.0
ATSAR1	1568.0
AT5G61530	1517.0
AT3G15680	1327.0
AT1G02620	1115.0
AT5G54780	953.0
DRP1A	942.0
MIRO1	731.0
emb1579	617.0
ROPGEF12	566.0
PRA1A3	536.0
SAR1A	474.0
RIC10	310.0
AT2G30710	294.0
RABA5C	64.0
RABE1C	-97.0
RABA1B	-119.0
ROPGEF14	-258.0
AT5G39900	-408.0
PRA1F4	-594.0
RAN4	-725.0
OBGL	-767.0
RABC1	-839.0
YAO	-906.0
AT4G13730	-987.0
AT5G02430	-1021.0
AT1G56050	-1054.0
GDI2	-1305.0
BIG3	-1359.0
WDR5B	-1435.0
PRA1.B3	-1491.0
RABH1B	-1518.0
RABE1A	-1553.0
RABA2B	-1663.0
AT3G23860	-1679.5
AT5G59840	-1741.0
AT4G01860	-1759.0
AT5G46070	-2052.0
FZL	-2128.0
GDI1	-2277.0
RABA1F	-2339.0
ROPGAP6	-2676.0
PRA1A2	-2765.0
RID3	-2812.0
RABF1	-2831.0
RABD2A	-3441.0
RAN2	-3465.0
AT3G07890	-3514.0
ATRAB5A	-3728.0
AT1G12070	-3907.0
ERG	-3928.0
XLG2	-4005.0
ARAC2	-4023.0
AT2G29020	-4099.0
ARAC8	-4153.0
AT4G07524	-4307.0
RABC2B	-4434.0
AT1G50920	-4498.0
ATOBGM	-4706.0
AT1G48870	-4707.0
VIP3	-4779.0
MIRO3	-4894.0
ARAC9	-4981.0
NUG2	-4985.0
LSG1-1	-5072.0
AT1G78010	-5229.0
AT5G52580	-5325.0
RABF2B	-5378.0
RABA1I	-5804.0
RABG3E	-5902.0
RACK1B	-5988.0
BIG1	-6039.0
PRA1H	-6046.0
SGP1	-6277.0
PRA1F3	-6282.0
RANGAP1	-6349.0
AGG1	-6354.0
AT1G04830	-6636.0
RABD2B	-6879.0
RAN1	-6955.0
RANBP1C	-6964.0
LSG1-2	-7201.0
GPA1	-7323.0
ROPGAP3	-7422.0
RABA4D	-7646.0
XLG3	-8036.0
RABA1G	-8124.0
BIG4	-8131.0
RANGAP2	-8176.0
emb2738	-8194.0
ARAC6	-8200.0
AT1G18070	-8423.0
AT5G53570	-8518.0
AT2G20440	-8571.0
AT5G41940	-8744.0
AT3G54190	-8848.0
AT4G35750	-9045.0
AT3G05010	-9222.0
NUP50B	-9249.0
TOC33	-9596.0
PRA1D	-9642.0
AT1G01440	-9737.0
VAR3	-9782.0
AT5G09550	-9880.0
AT5G39960	-10099.0
ROPGAP5	-10203.0
RAN3	-10333.0
AT2G39280	-10359.0
PCN	-10872.0
PRA1A1	-10880.0
AT5G08650	-11062.0
AT5G45760	-11212.0
AT4G02482	-11380.0
RABA1E	-11942.0
ROPGEF3	-11969.0
LIP1	-12261.0
MSH3	-12384.0
AT1G55040	-12443.0
AtRABH1a	-13066.0
PRN1	-13285.0
AT5G25490	-13299.0
PRA1B5	-13393.0

TRANSPORT_PEPTIDES_AND_OLIGOPEPTIDES

TRANSPORT_PEPTIDES_AND_OLIGOPEPTIDES
	291
set	TRANSPORT_PEPTIDES_AND_OLIGOPEPTIDES
setSize	58
pANOVA	0.00833
s.dist	0.2
p.adjustANOVA	0.0687

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NPF7.2	13398
OPT7	12760
NPF4.7	12687
NPF8.1	12670
NPF5.10	12557
NPF2.1	11939
NPF2.4	11759
YSL4	11363
OPT4	11341
NPF1.1	11099
NPF5.2	10700
NPF2.5	10548
YSL7	10166
NPF6.1	9662
NPF8.4	9366
NAXT1	8884
NPF4.4	8815
OPT6	8217
OPT5	8029
AT1G62200	7930

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NPF7.2	13398
OPT7	12760
NPF4.7	12687
NPF8.1	12670
NPF5.10	12557
NPF2.1	11939
NPF2.4	11759
YSL4	11363
OPT4	11341
NPF1.1	11099
NPF5.2	10700
NPF2.5	10548
YSL7	10166
NPF6.1	9662
NPF8.4	9366
NAXT1	8884
NPF4.4	8815
OPT6	8217
OPT5	8029
AT1G62200	7930
NPF5.9	5890
NPF5.12	5834
OPT1	5587
NPF4.1	5120
NPF1.2	4891
NPF1.3	4651
NPF7.3	4306
NPF2.10	2999
NPF2.12	2890
NPF5.14	2776
NPF2.9	2325
YSL5	2217
NPF5.4	2004
NPF2.2	1277
YSL8	1246
NPF5.16	1003
AT2G38100	576
NPF5.11	407
NPF5.8	-262
NPF4.3	-265
NPF5.15	-660
NPF3.1	-1779
AT3G45660	-1961
NPF2.13	-2959
AT5G28470	-3145
OPT2	-3614
YSL6	-3926
NPF2.3	-4390
NPF5.3	-4642
NPF5.13	-4997
NPF5.6	-6346
NPF5.7	-9724
NPF5.1	-9793
NPF2.11	-10929
OXA1	-11273
NPF8.2	-11335
NPF2.14	-11524
ATOPT3	-12077

NOT_ASSIGNED_NO_ONTOLOGY_TOLL-INTERLEUKIN-RESISTANCE_(TIR)_DOMAIN-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_TOLL-INTERLEUKIN-RESISTANCE_(TIR)_DOMAIN-CONTAINING_PROTEIN
	105
set	NOT_ASSIGNED_NO_ONTOLOGY_TOLL-INTERLEUKIN-RESISTANCE_(TIR)_DOMAIN-CONTAINING_PROTEIN
setSize	10
pANOVA	0.00899
s.dist	0.477
p.adjustANOVA	0.0721

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT1G57830	12643
AT5G44910	10114
AT5G38344	9727
AT1G57670	7955
AT1G57850	7364
AT1G47370	7070
AT5G45220	6371
AT5G45000	1470
AT4G23440	1255
TIK	-176

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT1G57830	12643
AT5G44910	10114
AT5G38344	9727
AT1G57670	7955
AT1G57850	7364
AT1G47370	7070
AT5G45220	6371
AT5G45000	1470
AT4G23440	1255
TIK	-176

LIPID_METABOLISM_EXOTICS_(STEROIDS,_SQUALENE_ETC)_SPHINGOLIPIDS

LIPID_METABOLISM_EXOTICS_(STEROIDS,_SQUALENE_ETC)_SPHINGOLIPIDS
	45
set	LIPID_METABOLISM_EXOTICS_(STEROIDS,_SQUALENE_ETC)_SPHINGOLIPIDS
setSize	20
pANOVA	0.0128
s.dist	0.322
p.adjustANOVA	0.0998

Top enriched genes

Top 20 genes
GeneID	Gene Rank
SPHK1	12488
DES-1-LIKE	10123
LAG1	9867
ATLCBK1	8847
ATCES1	8656
SLD1	8164
DPL1	8022
SBH1	7312
SLD2	7211
LAG13	5479
AT3G06060	5065
SBH2	4877
LAG2	3717
AT3G06470	3588
LPPD	2058
TSC10B	1584
LCB1	-147
ARV1	-3681
AT3G06460	-4992
AT1G75000	-12408

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
SPHK1	12488
DES-1-LIKE	10123
LAG1	9867
ATLCBK1	8847
ATCES1	8656
SLD1	8164
DPL1	8022
SBH1	7312
SLD2	7211
LAG13	5479
AT3G06060	5065
SBH2	4877
LAG2	3717
AT3G06470	3588
LPPD	2058
TSC10B	1584
LCB1	-147
ARV1	-3681
AT3G06460	-4992
AT1G75000	-12408

PROTEIN_SYNTHESIS_ELONGATION

PROTEIN_SYNTHESIS_ELONGATION
	137
set	PROTEIN_SYNTHESIS_ELONGATION
setSize	30
pANOVA	0.0132
s.dist	-0.261
p.adjustANOVA	0.1

Top enriched genes

Top 20 genes
GeneID	Gene Rank
A1	-13344
TFIIS	-12380
TUFA	-12166
emb2726	-11805
AT1G30230	-10584
CPEFG	-10348
AT5G19510	-9620
AT2G18110	-8956
AT3G12390	-8564
AT1G57720	-8411
GFL	-7491
ATRNL	-6453
LOS1	-4858
AT1G09640	-4846
AT3G08740	-4496
MEFG2	-4380
MEFG1	-4059
AT5G13650	-3639
AT3G22980	-3011
AT4G10480	-1197

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
A1	-13344
TFIIS	-12380
TUFA	-12166
emb2726	-11805
AT1G30230	-10584
CPEFG	-10348
AT5G19510	-9620
AT2G18110	-8956
AT3G12390	-8564
AT1G57720	-8411
GFL	-7491
ATRNL	-6453
LOS1	-4858
AT1G09640	-4846
AT3G08740	-4496
MEFG2	-4380
MEFG1	-4059
AT5G13650	-3639
AT3G22980	-3011
AT4G10480	-1197
CLO	268
AT1G35550	569
AT4G26310	1269
AT3G12915	1343
AT5G12110	2648
NACA2	4218
AT2G31060	4950
AT5G10630	7546
EFTS	10768
ACR7	11209

RNA_REGULATION_OF_TRANSCRIPTION_ABI3/VP1-RELATED_B3-DOMAIN-CONTAINING_TRANSCRIPTION_FACTOR_FAMILY

RNA_REGULATION_OF_TRANSCRIPTION_ABI3/VP1-RELATED_B3-DOMAIN-CONTAINING_TRANSCRIPTION_FACTOR_FAMILY
	182
set	RNA_REGULATION_OF_TRANSCRIPTION_ABI3/VP1-RELATED_B3-DOMAIN-CONTAINING_TRANSCRIPTION_FACTOR_FAMILY
setSize	11
pANOVA	0.0151
s.dist	-0.423
p.adjustANOVA	0.112

Top enriched genes

Top 20 genes
GeneID	Gene Rank
NGA1	-13188
AT3G11580	-12581
ARF31	-11476
NGA2	-10361
NGA4	-8953
FUS3	-8891
AT5G06250	-6910
VAL3	-4296
NGA3	2123
AT2G33720	5854
VAL2	5978

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
NGA1	-13188
AT3G11580	-12581
ARF31	-11476
NGA2	-10361
NGA4	-8953
FUS3	-8891
AT5G06250	-6910
VAL3	-4296
NGA3	2123
AT2G33720	5854
VAL2	5978

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C

MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C
	84
set	MITOCHONDRIAL_ELECTRON_TRANSPORT_/_ATP_SYNTHESIS_CYTOCHROME_C
setSize	14
pANOVA	0.0159
s.dist	-0.372
p.adjustANOVA	0.113

Top enriched genes

Top 20 genes
GeneID	Gene Rank
ATG1	-12101.0
CYC11	-11795.0
AT2G07681	-11418.0
CCB382	-8703.0
CYTC-1	-8542.0
AT2G07771	-7290.5
CCB256	-7290.5
CYC12	-4470.0
CYTC-2	-2685.0
CCB206	-2624.0
CCS1	-1206.0
CCB452	-955.0
CCMH	1715.0
CCB203	7186.0

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
ATG1	-12101.0
CYC11	-11795.0
AT2G07681	-11418.0
CCB382	-8703.0
CYTC-1	-8542.0
AT2G07771	-7290.5
CCB256	-7290.5
CYC12	-4470.0
CYTC-2	-2685.0
CCB206	-2624.0
CCS1	-1206.0
CCB452	-955.0
CCMH	1715.0
CCB203	7186.0

SECONDARY_METABOLISM_WAX

SECONDARY_METABOLISM_WAX
	237
set	SECONDARY_METABOLISM_WAX
setSize	21
pANOVA	0.016
s.dist	0.304
p.adjustANOVA	0.113

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT1G34490	12325
KCS5	10578
AT5G51420	9403
CER3	8671
AT5	8649
AT2	8499
KCR1	8496
KCS4	8334
KCS9	7908
AT3	6794
AT1G02190	6529
AT7	6268
AT1	6028
AT1G34500	2879
AT6	2409
CUT1	1060
AT2G37700	-803
ASAT1	-3388
AT1G34520	-4488
CER1	-10229

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT1G34490	12325
KCS5	10578
AT5G51420	9403
CER3	8671
AT5	8649
AT2	8499
KCR1	8496
KCS4	8334
KCS9	7908
AT3	6794
AT1G02190	6529
AT7	6268
AT1	6028
AT1G34500	2879
AT6	2409
CUT1	1060
AT2G37700	-803
ASAT1	-3388
AT1G34520	-4488
CER1	-10229
AT4	-10849

MISC_GDSL-MOTIF_LIPASE

MISC_GDSL-MOTIF_LIPASE
	69
set	MISC_GDSL-MOTIF_LIPASE
setSize	82
pANOVA	0.0164
s.dist	0.153
p.adjustANOVA	0.113

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT2G19060	13340
AT2G19050	13113
AT2G31540	13077
AT1G71691	12992
AT3G62280	12940
AT1G54790	12635
GLIP2	12362
AT4G10950	12247
GLIP5	12157
AT1G29660	11928
AT2G38180	11811
AT1G23500	11618
AT1G71250	10710
GLIP4	10624
AT5G33370	10211
AT1G59030	10205
AT5G45960	10074
AT3G14820	9853
AT1G74460	9815
AT1G75920	9317

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT2G19060	13340.0
AT2G19050	13113.0
AT2G31540	13077.0
AT1G71691	12992.0
AT3G62280	12940.0
AT1G54790	12635.0
GLIP2	12362.0
AT4G10950	12247.0
GLIP5	12157.0
AT1G29660	11928.0
AT2G38180	11811.0
AT1G23500	11618.0
AT1G71250	10710.0
GLIP4	10624.0
AT5G33370	10211.0
AT1G59030	10205.0
AT5G45960	10074.0
AT3G14820	9853.0
AT1G74460	9815.0
AT1G75920	9317.0
AT4G26790	9151.0
AT4G28780	8943.0
LTL1	8038.0
AT5G18430	7912.0
AT3G53100	7640.0
AT1G28570	7379.0
AT5G37690	7377.0
AT5G03600	7290.5
AT5G03820	6634.0
AT1G28600	5813.0
AT5G14450	5323.0
GLIP7	5102.0
AT2G03980	4384.0
AT1G33811	4180.0
AT2G30220	4029.0
AT3G09930	3145.5
CDEF1	2513.0
GLIP6	2393.0
LIP4	2319.0
AT1G28590	2173.0
AT2G40250	2170.0
AT2G24560	1944.0
AT1G28610	1629.0
AT5G45670	1356.0
CPRD49	484.0
AT2G42990	147.0
AT5G41890	124.0
AT1G73610	-195.0
AT2G23540	-204.0
AT3G50400	-260.0
AT1G29670	-411.0
AT5G62930	-484.0
GLIP1	-561.0
AT5G45910	-666.0
AT3G48460	-794.0
AT1G09390	-1535.0
AT2G31550	-1737.0
AT1G06990	-1752.0
AT2G04020	-2224.0
AT2G27360	-2348.0
AT5G03810	-2885.0
RXF26	-2918.0
AT5G08460	-3837.0
AT5G45950	-4241.0
AT3G05180	-4324.0
AT5G45920	-4408.0
AT1G28580	-4644.0
ESM1	-6755.0
AT4G18970	-7154.0
AT4G16230	-7536.0
AT5G42170	-7655.0
AT4G16220	-7682.0
AT5G22810	-8920.5
AT3G26430	-9099.0
AT5G03610	-9129.0
AT5G03980	-9466.5
APG	-10699.0
GLIP3	-10761.0
AT1G31550	-11437.0
AT2G04570	-11823.0
AT2G30310	-12718.0
AT5G55050	-13008.0

CELL_WALL_DEGRADATION_PECTATE_LYASES_AND_POLYGALACTURONASES

CELL_WALL_DEGRADATION_PECTATE_LYASES_AND_POLYGALACTURONASES
	18
set	CELL_WALL_DEGRADATION_PECTATE_LYASES_AND_POLYGALACTURONASES
setSize	83
pANOVA	0.018
s.dist	0.15
p.adjustANOVA	0.121

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT5G14650	13397
AT1G05650	13337
AT3G06770	13335
PGL2	13321
AT3G16850	13305
AT2G43890	13139
AT1G05660	13124
AT5G49215	13103
AT1G11920	12567
AT3G09540	11711
AT2G43880	11549
AT5G48900	11548
AT4G01890	11470
AT3G07010	11376
AT1G67750	10854
AT1G04680	10443
AT1G17150	10403
AT4G23820	10160
FLR1	10058
AT1G09910	9645

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT5G14650	13397.0
AT1G05650	13337.0
AT3G06770	13335.0
PGL2	13321.0
AT3G16850	13305.0
AT2G43890	13139.0
AT1G05660	13124.0
AT5G49215	13103.0
AT1G11920	12567.0
AT3G09540	11711.0
AT2G43880	11549.0
AT5G48900	11548.0
AT4G01890	11470.0
AT3G07010	11376.0
AT1G67750	10854.0
AT1G04680	10443.0
AT1G17150	10403.0
AT4G23820	10160.0
FLR1	10058.0
AT1G09910	9645.0
AT4G32375	8085.0
AT4G37950	7950.0
AT3G59850	7717.0
AT1G80170	7711.0
AT1G23460	7648.0
AT59	7532.0
AT4G18180	6959.5
AT3G42950	6718.0
AT2G33160	6589.0
AT3G15720	6366.0
AT1G02460	6286.0
AT3G07820	6186.0
AT2G23900	6179.0
AT4G13210	6084.0
AT1G78400	6079.0
PMR6	5401.0
PGL1	5312.0
AT3G07830	5271.0
AT5G55720	5022.0
AT3G62110	4763.0
AT2G43860	4690.0
RHS14	3997.0
AT3G57790	3868.0
AT3G53190	3472.0
AT3G24670	3450.0
PGL3	3188.0
AT1G70500	3167.0
AT4G32380	1960.0
QRT2	1611.0
AT4G13710	1116.0
AT1G19170	1086.0
AT3G24230	130.0
AT4G24780	-649.0
AT5G17200	-1592.0
AT2G22620	-2239.0
AT2G26620	-2537.0
AT1G10640	-2987.0
AT5G63180	-3179.0
AT1G48100	-4485.0
AT4G24430	-4652.0
AT1G65570	-5047.0
AT5G09280	-6017.0
AT5G04310	-6306.0
AT1G60590	-6459.0
AT5G41870	-6867.0
AT1G09880	-7430.0
AT3G27400	-7704.0
AT3G01270	-7818.0
PGIP2	-7843.0
PGA3	-7904.0
AT1G56710	-8422.0
AT4G38030	-9567.0
AT4G23500	-10298.0
AT3G55140	-10401.0
AT4G33440	-10564.0
AT2G43870	-10791.0
AT2G02720	-10897.0
ADPG2	-11219.0
AT1G09890	-11320.0
AT3G26610	-11528.0
AT3G61490	-12131.0
ADPG1	-12499.0
PGIP1	-13074.0

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VI

PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VI
	134
set	PROTEIN_POSTRANSLATIONAL_MODIFICATION_KINASE_RECEPTOR_LIKE_CYTOPLASMATIC_KINASE_VI
setSize	14
pANOVA	0.0196
s.dist	0.36
p.adjustANOVA	0.129

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT2G16750	12458
AT1G77280	11262
AT2G18890	9906
AT5G65530	9630
AT5G37790	9594
AT1G66460	8704
AT4G35030	8407
AT5G35960	7055
RBK1	4813
AT5G63940	641
AT5G57670	-1419
AT5G18910	-1803
AT1G21590	-2958
RBK2	-8916

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT2G16750	12458
AT1G77280	11262
AT2G18890	9906
AT5G65530	9630
AT5G37790	9594
AT1G66460	8704
AT4G35030	8407
AT5G35960	7055
RBK1	4813
AT5G63940	641
AT5G57670	-1419
AT5G18910	-1803
AT1G21590	-2958
RBK2	-8916

AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN

AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN
	1
set	AMINO_ACID_METABOLISM_DEGRADATION_AROMATIC_AA_TRYPTOPHAN
setSize	12
pANOVA	0.0232
s.dist	-0.378
p.adjustANOVA	0.147

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT2G30660	-11930
AT5G47720	-10777
ECI2	-9941
AT4G13360	-8992
CHY1	-8940
ECI1	-8610
AT3G60510	-6415
ECI3	-2913
ECHIA	-2726
AT1G06550	-2271
AT4G16800	-881
AT3G24360	13211

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT2G30660	-11930
AT5G47720	-10777
ECI2	-9941
AT4G13360	-8992
CHY1	-8940
ECI1	-8610
AT3G60510	-6415
ECI3	-2913
ECHIA	-2726
AT1G06550	-2271
AT4G16800	-881
AT3G24360	13211

NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN

NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN
	100
set	NOT_ASSIGNED_NO_ONTOLOGY_PAIRED_AMPHIPATHIC_HELIX_REPEAT-CONTAINING_PROTEIN
setSize	10
pANOVA	0.0232
s.dist	0.414
p.adjustANOVA	0.147

Top enriched genes

Top 20 genes
GeneID	Gene Rank
SNL3	12026.0
SNL4	11677.0
AT1G70030	8736.0
SNL1	8321.0
AT1G23810	6980.0
AT5G35610	6200.5
AT1G24230	3486.0
AT1G24210	1922.0
AT1G27280	1366.0
SNL6	-5329.0

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
SNL3	12026.0
SNL4	11677.0
AT1G70030	8736.0
SNL1	8321.0
AT1G23810	6980.0
AT5G35610	6200.5
AT1G24230	3486.0
AT1G24210	1922.0
AT1G27280	1366.0
SNL6	-5329.0

HORMONE_METABOLISM_ABSCISIC_ACID_SIGNAL_TRANSDUCTION

HORMONE_METABOLISM_ABSCISIC_ACID_SIGNAL_TRANSDUCTION
	31
set	HORMONE_METABOLISM_ABSCISIC_ACID_SIGNAL_TRANSDUCTION
setSize	12
pANOVA	0.0251
s.dist	-0.373
p.adjustANOVA	0.151

Top enriched genes

Top 20 genes
GeneID	Gene Rank
GCR2	-12932
ABI1	-12352
ABF4	-11940
MARD1	-9348
ABI2	-8484
ABF3	-7057
LEC2	-4685
ELD1	-4522
AIP2	-3549
VAL1	-852
ABF1	2794
ABI3	12554

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
GCR2	-12932
ABI1	-12352
ABF4	-11940
MARD1	-9348
ABI2	-8484
ABF3	-7057
LEC2	-4685
ELD1	-4522
AIP2	-3549
VAL1	-852
ABF1	2794
ABI3	12554

PROTEIN_TARGETING_CHLOROPLAST

PROTEIN_TARGETING_CHLOROPLAST
	157
set	PROTEIN_TARGETING_CHLOROPLAST
setSize	36
pANOVA	0.0251
s.dist	-0.216
p.adjustANOVA	0.151

Top enriched genes

Top 20 genes
GeneID	Gene Rank
OEP7	-12558
TPP1	-12536
TIC20-II	-12357
SCY1	-12103
FFC	-11873
TOC90	-11562
TIC22	-11412
TOC75-3	-11403
TOC33	-9596
OEP64	-9362
TIC20-IV	-8797
TOC132	-8474
TOC159	-7667
TIC20-I	-7624
TIC110	-6190
AGY1	-5659
TOC120	-5594
ALB3	-3687
TGD2	-2754
OM64	-2559

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
OEP7	-12558
TPP1	-12536
TIC20-II	-12357
SCY1	-12103
FFC	-11873
TOC90	-11562
TIC22	-11412
TOC75-3	-11403
TOC33	-9596
OEP64	-9362
TIC20-IV	-8797
TOC132	-8474
TOC159	-7667
TIC20-I	-7624
TIC110	-6190
AGY1	-5659
TOC120	-5594
ALB3	-3687
TGD2	-2754
OM64	-2559
AT1G21651	-2503
TIC55	-2390
TIC21	-2198
TATB	524
TIC40	834
CPFTSY	895
PLSP1	1590
AT4G15810	4413
SECA2	4616
OEP80	4771
OEP161	7559
TIC22L	9193
TATC	9654
TOC34	9792
SIB1	9819
TOC75-IV	12378

HORMONE_METABOLISM_ABSCISIC_ACID_INDUCED-REGULATED-RESPONSIVE-ACTIVATED

HORMONE_METABOLISM_ABSCISIC_ACID_INDUCED-REGULATED-RESPONSIVE-ACTIVATED
	30
set	HORMONE_METABOLISM_ABSCISIC_ACID_INDUCED-REGULATED-RESPONSIVE-ACTIVATED
setSize	23
pANOVA	0.0254
s.dist	-0.269
p.adjustANOVA	0.151

Top enriched genes

Top 20 genes
GeneID	Gene Rank
AT4G01600	-13065
AT3G02480	-13037
HVA22E	-12716
AT5G13200	-12584
FIP1	-12174
KIN1	-11880
TSPO	-10999
HVA22D	-10932
SAG113	-10814
AT5G23350	-9538
AT5G08350	-7823
ABF2	-7243
DPBF3	-5079
GEM	-4542
EM6	-1217
AT5G23370	1712
HVA22B	4556
ATBZIP27	5330
HVA22C	6621
HVA22A	7647

Click HERE to show all gene set members

All member genes
GeneID	Gene Rank
AT4G01600	-13065
AT3G02480	-13037
HVA22E	-12716
AT5G13200	-12584
FIP1	-12174
KIN1	-11880
TSPO	-10999
HVA22D	-10932
SAG113	-10814
AT5G23350	-9538
AT5G08350	-7823
ABF2	-7243
DPBF3	-5079
GEM	-4542
EM6	-1217
AT5G23370	1712
HVA22B	4556
ATBZIP27	5330
HVA22C	6621
HVA22A	7647
AT5G53820	9039
HVA22K	11850
AT5G23360	13356

Here is the session info with all the versions of packages used.

sessionInfo()

## R version 4.0.2 (2020-06-22)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 18.04.5 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
##  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
##  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C            
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] parallel  stats4    stats     graphics  grDevices utils     datasets 
## [8] methods   base     
## 
## other attached packages:
##  [1] pkgload_1.1.0               GGally_2.0.0               
##  [3] ggplot2_3.3.2               beeswarm_0.2.3             
##  [5] gtools_3.8.2                tibble_3.0.3               
##  [7] dplyr_1.0.2                 echarts4r_0.3.2            
##  [9] mitch_1.0.8                 DESeq2_1.28.1              
## [11] SummarizedExperiment_1.18.2 DelayedArray_0.14.1        
## [13] matrixStats_0.57.0          Biobase_2.48.0             
## [15] GenomicRanges_1.40.0        GenomeInfoDb_1.24.2        
## [17] IRanges_2.22.2              S4Vectors_0.26.1           
## [19] BiocGenerics_0.34.0         gplots_3.1.0               
## [21] reshape2_1.4.4             
## 
## loaded via a namespace (and not attached):
##  [1] bitops_1.0-6           bit64_4.0.5            RColorBrewer_1.1-2    
##  [4] progress_1.2.2         rprojroot_1.3-2        tools_4.0.2           
##  [7] backports_1.1.10       R6_2.4.1               KernSmooth_2.23-17    
## [10] DBI_1.1.0              colorspace_1.4-1       withr_2.3.0           
## [13] prettyunits_1.1.1      tidyselect_1.1.0       gridExtra_2.3         
## [16] bit_4.0.4              compiler_4.0.2         desc_1.2.0            
## [19] labeling_0.3           caTools_1.18.0         scales_1.1.1          
## [22] genefilter_1.70.0      stringr_1.4.0          digest_0.6.25         
## [25] rmarkdown_2.4          XVector_0.28.0         pkgconfig_2.0.3       
## [28] htmltools_0.5.0        fastmap_1.0.1          highr_0.8             
## [31] htmlwidgets_1.5.2      rlang_0.4.7            RSQLite_2.2.1         
## [34] shiny_1.5.0            farver_2.0.3           generics_0.0.2        
## [37] jsonlite_1.7.1         BiocParallel_1.22.0    RCurl_1.98-1.2        
## [40] magrittr_1.5           GenomeInfoDbData_1.2.3 Matrix_1.2-18         
## [43] Rcpp_1.0.5             munsell_0.5.0          lifecycle_0.2.0       
## [46] stringi_1.5.3          yaml_2.2.1             MASS_7.3-53           
## [49] zlibbioc_1.34.0        plyr_1.8.6             grid_4.0.2            
## [52] blob_1.2.1             promises_1.1.1         crayon_1.3.4          
## [55] lattice_0.20-41        splines_4.0.2          annotate_1.66.0       
## [58] hms_0.5.3              locfit_1.5-9.4         knitr_1.30            
## [61] pillar_1.4.6           geneplotter_1.66.0     XML_3.99-0.5          
## [64] glue_1.4.2             evaluate_0.14          vctrs_0.3.4           
## [67] httpuv_1.5.4           testthat_2.3.2         gtable_0.3.0          
## [70] purrr_0.3.4            reshape_0.8.8          assertthat_0.2.1      
## [73] xfun_0.18              mime_0.9               xtable_1.8-4          
## [76] later_1.1.0.1          survival_3.2-7         pbmcapply_1.5.0       
## [79] AnnotationDbi_1.50.3   memoise_1.1.0          ellipsis_0.3.1

END of report

Mitch Report

Antony Kaspi & Mark Ziemann

Background

Input profiles

Input genesets

Differential pathway expression

Interactive enrichment scatterplot

Results table

Results (complete table)

Detailed Gene set reports